Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G55325 AT1G55325 AT1G55325 AT1G55325 |
| fragaria_vesca | FvH4_3g45550 FvH4_3g45550 FvH4_3g45550 FvH4_3g45550 FvH4_3g45550 FvH4_3g45550 FvH4_3g45550 FvH4_3g45550 FvH4_3g45550 FvH4_3g45550 FvH4_3g45550 FvH4_3g45550 |
| malus_domestica | MD03G1004100.v1.1 |
| prunus_persica | Prupe.6G003600_v2.0.a1 Prupe.6G003600_v2.0.a1 Prupe.6G003600_v2.0.a1 Prupe.6G003600_v2.0.a1 |
| pyrus_communis | pycom03g00420 |
| rosa_chinensis | RchiOBHm_Chr5g0083741 |
| rosa_laevigata | RLG00000037049 |
| rosa_multiflora | Rmu_sc0001287.1_g000006 |
| rosa_roxburghii | Rroxscaffold_1G00000840 |
| rosa_rugosa | Rorug05G0485500 Rorug05G0485600 Rorug05G0485700 |
| rosa_samantha | Rh5AG538600 Rh5BG564000 Rh5CG585900 Rh5DG572400 |
| rosa_wichuraiana | Rw5G050090 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 5341 |
| Acc36I | ACCTGC | 3 cut(s) | 2879, 4783, 5341 |
| Acc65I | GGTACC | 1 cut(s) | 4319 |
| AccB1I | GGYRCC | 2 cut(s) | 1547, 4319 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1676, 5252 |
| AccI | GTMKAC | 4 cut(s) | 1300, 3782, 4612, 4726 |
| AccII | CGCG | 1 cut(s) | 3307 |
| AciI | CCGC | 8 cut(s) | 62, 135, 3079, 3492, 4439, 4942, 5387, 5702 |
| AcsI | RAATTY | 6 cut(s) | 506, 622, 1877, 2104, 2338, 5663 |
| AcuI | CTGAAG | 8 cut(s) | 546, 626, 871, 2534, 2714, 3752, 5153, 5375 |
| AcvI | CACGTG | 1 cut(s) | 174 |
| AdeI | CACNNNGTG | 2 cut(s) | 1169, 5858 |
| AflII | CTTAAG | 2 cut(s) | 3374, 4109 |
| AflIII | ACRYGT | 2 cut(s) | 4413, 5402 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 4608, 5736 |
| AhlI | ACTAGT | 1 cut(s) | 4079 |
| AjiI | CACGTC | 1 cut(s) | 775 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 1782, 1814, 2260, 2292, 5081, 5113 |
| AleI | CACNNNNGTG | 1 cut(s) | 5309 |
| Alw21I | GWGCWC | 5 cut(s) | 577, 2620, 5137, 5260, 5832 |
| Alw44I | GTGCAC | 1 cut(s) | 5133 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 385, 1637, 4789 |
| Ama87I | CYCGRG | 4 cut(s) | 1371, 2147, 2622, 3845 |
| ApaLI | GTGCAC | 1 cut(s) | 5133 |
| ApoI | RAATTY | 6 cut(s) | 506, 622, 1877, 2104, 2338, 5663 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 477 |
| Asp718I | GGTACC | 1 cut(s) | 4319 |
| AspLEI | GCGC | 4 cut(s) | 1368, 2590, 2607, 3307 |
| AsuC2I | CCSGG | 1 cut(s) | 4233 |
| AsuII | TTCGAA | 1 cut(s) | 1755 |
| AvaI | CYCGRG | 4 cut(s) | 1371, 2147, 2622, 3845 |
| AvaII | GGWCC | 8 cut(s) | 6, 177, 202, 1667, 1841, 2870, 4210, 4256 |
| BaeGI | GKGCMC | 2 cut(s) | 3839, 5137 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 5400, 5433 |
| BanI | GGYRCC | 2 cut(s) | 1547, 4319 |
| BanII | GRGCYC | 6 cut(s) | 1629, 2620, 3191, 5260, 5282, 5832 |
| BarI | GAAGNNNNNNTAC | 6 cut(s) | 2194, 2226, 2893, 2925, 3796, 3828 |
| BauI | CACGAG | 1 cut(s) | 4155 |
| BbrPI | CACGTG | 1 cut(s) | 174 |
| BbsI | GAAGAC | 5 cut(s) | 2093, 2424, 3898, 4176, 4218 |
| Bbv12I | GWGCWC | 5 cut(s) | 577, 2620, 5137, 5260, 5832 |
| BbvCI | CCTCAGC | 2 cut(s) | 999, 1899 |
| BceAI | ACGGC | 3 cut(s) | 181, 1561, 2432 |
| BcgI | CGANNNNNNTGC | 8 cut(s) | 905, 939, 1541, 1575, 1727, 1761, 3836, 3870 |
| BciVI | GTATCC | 1 cut(s) | 4552 |
| BclI | TGATCA | 5 cut(s) | 940, 1720, 1882, 5209, 5572 |
| BcnI | CCSGG | 1 cut(s) | 4233 |
| BcuI | ACTAGT | 1 cut(s) | 4079 |
| BfoI | RGCGCY | 2 cut(s) | 1369, 2608 |
| BfrI | CTTAAG | 2 cut(s) | 3374, 4109 |
| BfuAI | ACCTGC | 3 cut(s) | 2879, 4783, 5341 |
| BfuI | GTATCC | 1 cut(s) | 4552 |
| BglII | AGATCT | 2 cut(s) | 3929, 4946 |
| BmcAI | AGTACT | 2 cut(s) | 603, 3157 |
| Bme18I | GGWCC | 8 cut(s) | 6, 177, 202, 1667, 1841, 2870, 4210, 4256 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 4608, 5736 |
| BmeT110I | CYCGRG | 4 cut(s) | 1371, 2147, 2622, 3845 |
| BmgBI | CACGTC | 1 cut(s) | 775 |
| BmrI | ACTGGG | 3 cut(s) | 4278, 4563, 5642 |
| BmuI | ACTGGG | 3 cut(s) | 4278, 4563, 5642 |
| BpiI | GAAGAC | 5 cut(s) | 2093, 2424, 3898, 4176, 4218 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 1495, 1527, 3572, 3604 |
| BpmI | CTGGAG | 5 cut(s) | 348, 1761, 4371, 4766, 5274 |
| Bpu10I | CCTNAGC | 2 cut(s) | 999, 1899 |
| Bpu14I | TTCGAA | 1 cut(s) | 1755 |
| BpuMI | CCSGG | 1 cut(s) | 4233 |
| Bsa29I | ATCGAT | 1 cut(s) | 3474 |
| BsaAI | YACGTR | 2 cut(s) | 174, 2173 |
| BsaBI | GATNNNNATC | 2 cut(s) | 2577, 4951 |
| BsaI | GGTCTC | 1 cut(s) | 2632 |
| BsaWI | WCCGGW | 2 cut(s) | 680, 1664 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1903, 1933 |
| Bse118I | RCCGGY | 2 cut(s) | 1262, 2933 |
| Bse3DI | GCAATG | 2 cut(s) | 2928, 3664 |
| Bse8I | GATNNNNATC | 2 cut(s) | 2577, 4951 |
| BseCI | ATCGAT | 1 cut(s) | 3474 |
| BseJI | GATNNNNATC | 2 cut(s) | 2577, 4951 |
| BseMI | GCAATG | 2 cut(s) | 2928, 3664 |
| BseRI | GAGGAG | 2 cut(s) | 645, 2610 |
| BseSI | GKGCMC | 2 cut(s) | 3839, 5137 |
| BseYI | CCCAGC | 2 cut(s) | 1376, 4370 |
| BsgI | GTGCAG | 1 cut(s) | 3380 |
| Bsh1236I | CGCG | 1 cut(s) | 3307 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1327 |
| BshNI | GGYRCC | 2 cut(s) | 1547, 4319 |
| BshVI | ATCGAT | 1 cut(s) | 3474 |
| BsiEI | CGRYCG | 1 cut(s) | 1327 |
| BsiHKAI | GWGCWC | 5 cut(s) | 577, 2620, 5137, 5260, 5832 |
| BsiHKCI | CYCGRG | 4 cut(s) | 1371, 2147, 2622, 3845 |
| BsiSI | CCGG | 5 cut(s) | 681, 1263, 1665, 2934, 4232 |
| BslFI | GGGAC | 9 cut(s) | 215, 362, 998, 1827, 2335, 3728, 4755, 4844, 5115 |
| BsmBI | CGTCTC | 1 cut(s) | 781 |
| BsmFI | GGGAC | 9 cut(s) | 215, 362, 998, 1827, 2335, 3728, 4755, 4844, 5115 |
| BsmI | GAATGC | 3 cut(s) | 610, 2387, 4273 |
| Bso31I | GGTCTC | 1 cut(s) | 2632 |
| BsoBI | CYCGRG | 4 cut(s) | 1371, 2147, 2622, 3845 |
| Bsp119I | TTCGAA | 1 cut(s) | 1755 |
| Bsp1286I | GDGCHC | 9 cut(s) | 577, 1629, 2620, 3191, 3839, 5137, 5260, 5282, 5832 |
| Bsp1407I | TGTACA | 1 cut(s) | 2761 |
| Bsp19I | CCATGG | 1 cut(s) | 1785 |
| BspACI | CCGC | 8 cut(s) | 62, 135, 3079, 3492, 4439, 4942, 5387, 5702 |
| BspDI | ATCGAT | 1 cut(s) | 3474 |
| BspFNI | CGCG | 1 cut(s) | 3307 |
| BspHI | TCATGA | 1 cut(s) | 5610 |
| BspMAI | CTGCAG | 7 cut(s) | 1062, 1642, 3000, 3297, 4047, 4773, 4794 |
| BspMI | ACCTGC | 3 cut(s) | 2879, 4783, 5341 |
| BspQI | GCTCTTC | 4 cut(s) | 468, 1861, 3438, 4807 |
| BspT104I | TTCGAA | 1 cut(s) | 1755 |
| BspT107I | GGYRCC | 2 cut(s) | 1547, 4319 |
| BspTI | CTTAAG | 2 cut(s) | 3374, 4109 |
| BspTNI | GGTCTC | 1 cut(s) | 2632 |
| BsrDI | GCAATG | 2 cut(s) | 2928, 3664 |
| BsrFI | RCCGGY | 2 cut(s) | 1262, 2933 |
| BsrGI | TGTACA | 1 cut(s) | 2761 |
| BssAI | RCCGGY | 2 cut(s) | 1262, 2933 |
| BssSI | CACGAG | 1 cut(s) | 4155 |
| BssT1I | CCWWGG | 1 cut(s) | 1785 |
| Bst2BI | CACGAG | 1 cut(s) | 4155 |
| Bst6I | CTCTTC | 9 cut(s) | 351, 468, 522, 928, 1785, 1861, 2510, 3438, 4807 |
| BstAFI | CTTAAG | 2 cut(s) | 3374, 4109 |
| BstAUI | TGTACA | 1 cut(s) | 2761 |
| BstBAI | YACGTR | 2 cut(s) | 174, 2173 |
| BstBI | TTCGAA | 1 cut(s) | 1755 |
| BstC8I | GCNNGC | 8 cut(s) | 546, 2096, 2832, 3214, 3342, 3388, 4846, 5366 |
| BstDSI | CCRYGG | 2 cut(s) | 197, 1785 |
| BstEII | GGTNACC | 1 cut(s) | 2468 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 377, 427 |
| BstFNI | CGCG | 1 cut(s) | 3307 |
| BstH2I | RGCGCY | 2 cut(s) | 1369, 2608 |
| BstHHI | GCGC | 4 cut(s) | 1368, 2590, 2607, 3307 |
| BstMCI | CGRYCG | 1 cut(s) | 1327 |
| BstNSI | RCATGY | 7 cut(s) | 548, 569, 1562, 3537, 4417, 5368, 5406 |
| BstPI | GGTNACC | 1 cut(s) | 2468 |
| BstSLI | GKGCMC | 2 cut(s) | 3839, 5137 |
| BstUI | CGCG | 1 cut(s) | 3307 |
| BstV2I | GAAGAC | 5 cut(s) | 2093, 2424, 3898, 4176, 4218 |
| BstX2I | RGATCY | 8 cut(s) | 950, 1123, 1508, 3896, 3929, 4160, 4199, 4946 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 124 |
| BstYI | RGATCY | 8 cut(s) | 950, 1123, 1508, 3896, 3929, 4160, 4199, 4946 |
| Bsu15I | ATCGAT | 1 cut(s) | 3474 |
| BsuI | GTATCC | 1 cut(s) | 4552 |
| BsuTUI | ATCGAT | 1 cut(s) | 3474 |
| BtgI | CCRYGG | 2 cut(s) | 197, 1785 |
| BtgZI | GCGATG | 2 cut(s) | 1695, 3653 |
| BtrI | CACGTC | 1 cut(s) | 775 |
| BtsI | GCAGTG | 5 cut(s) | 106, 1011, 2852, 3984, 5409 |
| BveI | ACCTGC | 3 cut(s) | 2879, 4783, 5341 |
| Cac8I | GCNNGC | 8 cut(s) | 546, 2096, 2832, 3214, 3342, 3388, 4846, 5366 |
| CaiI | CAGNNNCTG | 3 cut(s) | 385, 1637, 4789 |
| CciI | TCATGA | 1 cut(s) | 5610 |
| CfoI | GCGC | 4 cut(s) | 1368, 2590, 2607, 3307 |
| Cfr10I | RCCGGY | 2 cut(s) | 1262, 2933 |
| ClaI | ATCGAT | 1 cut(s) | 3474 |
| CseI | GACGC | 6 cut(s) | 1289, 1660, 2339, 2388, 3296, 4310 |
| CsiI | ACCWGGT | 1 cut(s) | 4444 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2828, 2863 |
| DraI | TTTAAA | 2 cut(s) | 1044, 1348 |
| DraIII | CACNNNGTG | 2 cut(s) | 1169, 5858 |
| DriI | GACNNNNNGTC | 2 cut(s) | 4608, 5736 |
| Eam1104I | CTCTTC | 9 cut(s) | 351, 468, 522, 928, 1785, 1861, 2510, 3438, 4807 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 4608, 5736 |
| EarI | CTCTTC | 9 cut(s) | 351, 468, 522, 928, 1785, 1861, 2510, 3438, 4807 |
| Ecl136II | GAGCTC | 3 cut(s) | 2618, 5258, 5830 |
| Eco130I | CCWWGG | 1 cut(s) | 1785 |
| Eco24I | GRGCYC | 6 cut(s) | 1629, 2620, 3191, 5260, 5282, 5832 |
| Eco31I | GGTCTC | 1 cut(s) | 2632 |
| Eco32I | GATATC | 1 cut(s) | 339 |
| Eco47I | GGWCC | 8 cut(s) | 6, 177, 202, 1667, 1841, 2870, 4210, 4256 |
| Eco53kI | GAGCTC | 3 cut(s) | 2618, 5258, 5830 |
| Eco57I | CTGAAG | 8 cut(s) | 546, 626, 871, 2534, 2714, 3752, 5153, 5375 |
| Eco72I | CACGTG | 1 cut(s) | 174 |
| Eco88I | CYCGRG | 4 cut(s) | 1371, 2147, 2622, 3845 |
| Eco91I | GGTNACC | 1 cut(s) | 2468 |
| EcoICRI | GAGCTC | 3 cut(s) | 2618, 5258, 5830 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 377, 427 |
| EcoO109I | RGGNCCY | 4 cut(s) | 202, 861, 1073, 1841 |
| EcoO65I | GGTNACC | 1 cut(s) | 2468 |
| EcoRI | GAATTC | 1 cut(s) | 2104 |
| EcoRV | GATATC | 1 cut(s) | 339 |
| EcoT14I | CCWWGG | 1 cut(s) | 1785 |
| EcoT22I | ATGCAT | 3 cut(s) | 3664, 4588, 4661 |
| EcoT38I | GRGCYC | 6 cut(s) | 1629, 2620, 3191, 5260, 5282, 5832 |
| ErhI | CCWWGG | 1 cut(s) | 1785 |
| Esp3I | CGTCTC | 1 cut(s) | 781 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 1408, 1440, 1782, 1814, 2688, 2720, 3002, 3034 |
| FaqI | GGGAC | 9 cut(s) | 215, 362, 998, 1827, 2335, 3728, 4755, 4844, 5115 |
| FauI | CCCGC | 1 cut(s) | 69 |
| FauNDI | CATATG | 2 cut(s) | 2041, 3427 |
| FbaI | TGATCA | 5 cut(s) | 940, 1720, 1882, 5209, 5572 |
| FblI | GTMKAC | 4 cut(s) | 1300, 3782, 4612, 4726 |
| FriOI | GRGCYC | 6 cut(s) | 1629, 2620, 3191, 5260, 5282, 5832 |
| GlaI | GCGC | 4 cut(s) | 1367, 2589, 2606, 3306 |
| GsaI | CCCAGC | 2 cut(s) | 1380, 4374 |
| GsuI | CTGGAG | 5 cut(s) | 348, 1761, 4371, 4766, 5274 |
| HaeII | RGCGCY | 2 cut(s) | 1369, 2608 |
| HapII | CCGG | 5 cut(s) | 681, 1263, 1665, 2934, 4232 |
| HgaI | GACGC | 6 cut(s) | 1289, 1660, 2339, 2388, 3296, 4310 |
| HhaI | GCGC | 4 cut(s) | 1368, 2590, 2607, 3307 |
| Hin6I | GCGC | 4 cut(s) | 1366, 2588, 2605, 3305 |
| HinP1I | GCGC | 4 cut(s) | 1366, 2588, 2605, 3305 |
| HincII | GTYRAC | 4 cut(s) | 1468, 1690, 2946, 3586 |
| HindII | GTYRAC | 4 cut(s) | 1468, 1690, 2946, 3586 |
| HindIII | AAGCTT | 1 cut(s) | 3756 |
| HpaI | GTTAAC | 1 cut(s) | 2946 |
| HpaII | CCGG | 5 cut(s) | 681, 1263, 1665, 2934, 4232 |
| Hpy99I | CGWCG | 2 cut(s) | 3340, 4149 |
| HpyCH4IV | ACGT | 4 cut(s) | 173, 774, 1168, 2172 |
| HpySE526I | ACGT | 4 cut(s) | 173, 774, 1168, 2172 |
| HspAI | GCGC | 4 cut(s) | 1366, 2588, 2605, 3305 |
| KflI | GGGWCCC | 1 cut(s) | 202 |
| KpnI | GGTACC | 1 cut(s) | 4323 |
| Ksp22I | TGATCA | 5 cut(s) | 940, 1720, 1882, 5209, 5572 |
| KspAI | GTTAAC | 1 cut(s) | 2946 |
| LguI | GCTCTTC | 4 cut(s) | 468, 1861, 3438, 4807 |
| MabI | ACCWGGT | 1 cut(s) | 4444 |
| MaeII | ACGT | 4 cut(s) | 173, 774, 1168, 2172 |
| MfeI | CAATTG | 3 cut(s) | 4937, 5199, 5205 |
| MflI | RGATCY | 8 cut(s) | 950, 1123, 1508, 3896, 3929, 4160, 4199, 4946 |
| MhlI | GDGCHC | 9 cut(s) | 577, 1629, 2620, 3191, 3839, 5137, 5260, 5282, 5832 |
| MmeI | TCCRAC | 8 cut(s) | 51, 106, 1798, 3021, 3184, 3532, 4234, 5405 |
| Mph1103I | ATGCAT | 3 cut(s) | 3664, 4588, 4661 |
| MroXI | GAANNNNTTC | 1 cut(s) | 477 |
| MslI | CAYNNNNRTG | 5 cut(s) | 122, 2583, 3011, 4220, 5309 |
| MspA1I | CMGCKG | 4 cut(s) | 998, 3212, 3494, 5395 |
| MspCI | CTTAAG | 2 cut(s) | 3374, 4109 |
| MspI | CCGG | 5 cut(s) | 681, 1263, 1665, 2934, 4232 |
| MunI | CAATTG | 3 cut(s) | 4937, 5199, 5205 |
| Mva1269I | GAATGC | 3 cut(s) | 610, 2387, 4273 |
| MvnI | CGCG | 1 cut(s) | 3307 |
| NciI | CCSGG | 1 cut(s) | 4233 |
| NcoI | CCATGG | 1 cut(s) | 1785 |
| NdeI | CATATG | 2 cut(s) | 2041, 3427 |
| NmeAIII | GCCGAG | 1 cut(s) | 3950 |
| NmuCI | GTSAC | 8 cut(s) | 854, 1538, 2468, 2915, 3058, 4051, 5037, 5194 |
| NsiI | ATGCAT | 3 cut(s) | 3664, 4588, 4661 |
| NspI | RCATGY | 7 cut(s) | 548, 569, 1562, 3537, 4417, 5368, 5406 |
| NspV | TTCGAA | 1 cut(s) | 1755 |
| OliI | CACNNNNGTG | 1 cut(s) | 5309 |
| PaeI | GCATGC | 2 cut(s) | 548, 5368 |
| PaeR7I | CTCGAG | 1 cut(s) | 1371 |
| PagI | TCATGA | 1 cut(s) | 5610 |
| PaqCI | CACCTGC | 1 cut(s) | 5341 |
| PasI | CCCWGGG | 1 cut(s) | 4827 |
| PciI | ACATGT | 2 cut(s) | 4413, 5402 |
| PciSI | GCTCTTC | 4 cut(s) | 468, 1861, 3438, 4807 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 1165, 4153 |
| PctI | GAATGC | 3 cut(s) | 610, 2387, 4273 |
| PdmI | GAANNNNTTC | 1 cut(s) | 477 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1676, 5252 |
| PfoI | TCCNGGA | 2 cut(s) | 2119, 5251 |
| Ple19I | CGATCG | 1 cut(s) | 1327 |
| PmaCI | CACGTG | 1 cut(s) | 174 |
| PmlI | CACGTG | 1 cut(s) | 174 |
| Ppu21I | YACGTR | 2 cut(s) | 174, 2173 |
| PpuMI | RGGWCCY | 2 cut(s) | 202, 1841 |
| PscI | ACATGT | 2 cut(s) | 4413, 5402 |
| Psp124BI | GAGCTC | 3 cut(s) | 2620, 5260, 5832 |
| Psp5II | RGGWCCY | 2 cut(s) | 202, 1841 |
| PspCI | CACGTG | 1 cut(s) | 174 |
| PspEI | GGTNACC | 1 cut(s) | 2468 |
| PspFI | CCCAGC | 2 cut(s) | 1376, 4370 |
| PspPPI | RGGWCCY | 2 cut(s) | 202, 1841 |
| PspXI | VCTCGAGB | 1 cut(s) | 1371 |
| PstI | CTGCAG | 7 cut(s) | 1062, 1642, 3000, 3297, 4047, 4773, 4794 |
| PstNI | CAGNNNCTG | 3 cut(s) | 385, 1637, 4789 |
| PsuI | RGATCY | 8 cut(s) | 950, 1123, 1508, 3896, 3929, 4160, 4199, 4946 |
| PvuI | CGATCG | 1 cut(s) | 1327 |
| PvuII | CAGCTG | 3 cut(s) | 998, 3212, 5395 |
| RseI | CAYNNNNRTG | 5 cut(s) | 122, 2583, 3011, 4220, 5309 |
| SacI | GAGCTC | 3 cut(s) | 2620, 5260, 5832 |
| SapI | GCTCTTC | 4 cut(s) | 468, 1861, 3438, 4807 |
| ScaI | AGTACT | 2 cut(s) | 603, 3157 |
| SduI | GDGCHC | 9 cut(s) | 577, 1629, 2620, 3191, 3839, 5137, 5260, 5282, 5832 |
| SexAI | ACCWGGT | 1 cut(s) | 4444 |
| Sfr274I | CTCGAG | 1 cut(s) | 1371 |
| SfuI | TTCGAA | 1 cut(s) | 1755 |
| SinI | GGWCC | 8 cut(s) | 6, 177, 202, 1667, 1841, 2870, 4210, 4256 |
| SlaI | CTCGAG | 1 cut(s) | 1371 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 122, 2583, 3011, 4220, 5309 |
| SpeI | ACTAGT | 1 cut(s) | 4079 |
| SphI | GCATGC | 2 cut(s) | 548, 5368 |
| SsiI | CCGC | 8 cut(s) | 62, 135, 3079, 3492, 4439, 4942, 5387, 5702 |
| SstI | GAGCTC | 3 cut(s) | 2620, 5260, 5832 |
| StyI | CCWWGG | 1 cut(s) | 1785 |
| TaiI | ACGT | 4 cut(s) | 176, 777, 1171, 2175 |
| TaqI | TCGA | 7 cut(s) | 1372, 1755, 2258, 2435, 2630, 3474, 4147 |
| TaqII | GACCGA | 2 cut(s) | 3331, 4198 |
| TatI | WGTACW | 4 cut(s) | 601, 2230, 2761, 3155 |
| TauI | GCSGC | 3 cut(s) | 3081, 3494, 5705 |
| TseFI | GTSAC | 8 cut(s) | 854, 1538, 2468, 2915, 3058, 4051, 5037, 5194 |
| Tsp45I | GTSAC | 8 cut(s) | 854, 1538, 2468, 2915, 3058, 4051, 5037, 5194 |
| TspGWI | ACGGA | 1 cut(s) | 3324 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1676, 5252 |
| Vha464I | CTTAAG | 2 cut(s) | 3374, 4109 |
| VneI | GTGCAC | 1 cut(s) | 5133 |
| VpaK11BI | GGWCC | 8 cut(s) | 6, 177, 202, 1667, 1841, 2870, 4210, 4256 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 377, 427 |
| XapI | RAATTY | 6 cut(s) | 506, 622, 1877, 2104, 2338, 5663 |
| XbaI | TCTAGA | 1 cut(s) | 1997 |
| XceI | RCATGY | 7 cut(s) | 548, 569, 1562, 3537, 4417, 5368, 5406 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 589, 2177 |
| XhoI | CTCGAG | 1 cut(s) | 1371 |
| XmiI | GTMKAC | 4 cut(s) | 1300, 3782, 4612, 4726 |
| XmnI | GAANNNNTTC | 1 cut(s) | 477 |
| ZrmI | AGTACT | 2 cut(s) | 603, 3157 |
| Zsp2I | ATGCAT | 3 cut(s) | 3664, 4588, 4661 |