FvH4_4g00270

AarF domain-containing protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0011327
Physical Location & Seq
Forward (+)
274788 .. 281187
6400 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g00270.t3

Sequence Viewer

Length: 2325 bp
ATGGAGGCAGCGCCACAGCTGGTTTCGAGTGGAATCGAGTCCCTCCGCCGCACAGCCAAGCATTCATTCACAACCAGTACCACCAGAGTTGGCCTTCCCAAACGATTTCACCGCGTTCTTGCCGTCGCCACCAAGCCCGGTTCTAAACCCAAATCTCCATCCCCTGATTCCAAACCCATCAATGGAACTTCCACGAGAATCGGAGATGTTTCCAAGGAAATCAAGAGGGTTCGCGCACAGATGGAAGAAAACGAGGACCTGGCAATTCTCATGAAAGGTCTTCGCGGTCAAAATTTGAAGGACTCACAGTTTGCGGAGGATGATGTTCAGCTTCGTCTGGTTGAGACAGATGAAAGCAGTGAATTTTTGCCTGTGCTGTATGATCCTGCTAGCATCTCTGCGTATTGGGGAAAGCGCCCCCGCGCTGTCGTCACACGTGTCATCCAGTTACTCTCTGTAGCTGGGGGTTTCCTTTCACGTCTTGCCGCCGATTTTATTAACAAGAAAATCAAACAGAATGAAGTTGCTAGGGCCATTGAAATAAGAGAAATTGTGACCTCTTTGGGGCCTGCATATATCAAACTTGGCCAAGCATTGAGCATTCGACCAGATATACTGTCACCCGCTGCAATGACGGAGCTGCAAAAGCTTTGTGATAAGGTTCCTTCATTTCCGGATGATATAGCTATGGCTCTCATTGAGGAGGAGCTTGGTCAGCCATGGCAAAACATCTACTCTGAGCTCTCTTCGTCTCCAATTGCTGCTGCATCTCTTGGGCAAGTATATAAGGGCCGGCTAAAAGAAAACGGAGATCCAGTGGCTGTTAAAGTGCAGAGGCCTTATGTTCTTGAAACAGTAACTGTTGATTTGTTTGTCATACGGAACTTGGGTTTGTTCCTCCGGAAGTTTCCTCAGGTGTCTGTAGATGTGGTTGGATTAGTTGATGAATGGGCAGCTCGTTTCTTTGAAGAGTTAGATTATGTTAATGAGGGTGAGAATGGACTACTCTTTGCTGAAATGATGAGAAAAGACCTTCCACAGGTGGTTGTACCAAAAACATACCCAAAATATACATCAAGAAAGGTTCTTACTACATCGTGGATAGAAGGAGAGAAGCTATCACAAAGTACTGAAAGTGATGTCGGAGAACTGGTCAATGTTGGAGTCATATGCTACCTAAAGCAGTTGCTCGACACCGGACTATTTCATGCTGATCCTCATCCTGGGAATTTGATTCGCACTCCAGATGGCAAGCTTGCTATACTTGATTTTGGTCTGGTCACCAAGTTGACTGATGATCAGAAGTATGGAATGATCGAAGCAATTGCTCACCTTATTCATCGTGACTATGGAGCCATAGTCAAAGACTTTGTCAAGCTTGGTTTTATTGACGAGGGAGTTAATCTAGAACCTATTTTGCCTGTTCTGGCCAAGGTTTTTGATCAGGCTCTTGAAGGTGGAGGAGCAAAAAATATCAACTTCCAGGACTTGGCAGCAGATCTGGCACAAATTACATTTGACTATCCATTTAAGATACCGCCTTATTTCGCTCTTATAATTAGAGCAATTGGGGTCCTGGAAGGCATAGCTTTAGTGGGAAATCCTGATTTTGCTATTGTGGATGAGGCCTATCCATATATTGCCCAGAGGCTCCTGACAGATGAATCCCCACGGTTAAGGAATGCTTTGCGTTACACAATTTATGGGAAATCGGGAGTTTTTGATGCCGAGAGATTTATTGATGTCATGCAAGCCTTTGAAAGTTTCATAACTGCTGCTAAAAGTGGAGGTGGAGAGGAGATGAATGGTGATATGGCTGAACTTGGACTTTTGCAAAGTCAAACTGAGTATTCCCTTCCTGGATTTGCATCAGATGTGCAACCAGTTCAAACAAGGGCGGCTTTAGCATTTGTACTGTCTGATAAGGGAAACTTTTTCAGAGAATTTCTTCTGGATGAGATTGTGAAAGGCATAGATGCAGTTACAAGAGAACAACTGGTTCGTGCAATGGCACTTCTTGGATTCGGGAACGCTCTCCCAGTTTTCAGCATGGTTCCTAGTTTTGGGCTGTTCAAGCCTGCAGGACTTCTACCAACCATAACTGAGGAGGATAGAGTCATATTGAACAATGTTCAAACAGTAGTCGAGTTCCTGGCTGCAGGAAGTTCGATATCAAGAATGTCCAATCAGGAATTAAATGTGTCTCAGGTTATCCAAGAGTTTCTTCCTGTTTTGCCAAGTATCTCTTCCAAAGTGCTCCCTGAAGTGCTGAACCGATTATCGTCACGGGTAATAGCACGTGTGATTAGGGATACAATTTTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ABC1 APH

Protein Analysis

775

Amino Acids

85.31

Weight (kDa)

5.29

Isoelectric Point (pI)

37.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC1 PF03109 216 - 455 1.8e-63 ABC1 atypical kinase-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1556
AccB7I CCANNNNNTGG 1 cut(s) 1489
AccII CGCG 4 cut(s) 114, 234, 285, 423
AccIII TCCGGA 2 cut(s) 673, 900
AclWI GGATC 3 cut(s) 377, 806, 1208
AcoI YGGCCR 2 cut(s) 586, 1428
AcsI RAATTY 4 cut(s) 292, 362, 1228, 1943
AcuI CTGAAG 1 cut(s) 2283
AcvI CACGTG 2 cut(s) 437, 2300
AfaI GTAC 4 cut(s) 79, 1050, 1129, 1914
AfiI CCNNNNNNNGG 6 cut(s) 182, 564, 1039, 1223, 1489, 2063
AflIII ACRYGT 3 cut(s) 434, 436, 2299
AjiI CACGTC 1 cut(s) 479
AjnI CCWGG 6 cut(s) 258, 1222, 1482, 1575, 1858, 2151
AjuI GAANNNNNNNTTGG 6 cut(s) 50, 82, 2208, 2230, 2240, 2262
Alw21I GWGCWC 2 cut(s) 744, 2259
Alw26I GTCTC 3 cut(s) 338, 756, 2208
AlwI GGATC 3 cut(s) 377, 806, 1208
AlwNI CAGNNNCTG 2 cut(s) 821, 860
Aor13HI TCCGGA 2 cut(s) 673, 900
AoxI GGCC 8 cut(s) 91, 531, 566, 586, 790, 836, 1428, 1626
ApeKI GCWGC 9 cut(s) 8, 626, 640, 761, 764, 953, 1493, 1775, 2156
ApoI RAATTY 4 cut(s) 292, 362, 1228, 1943
ArsI GACNNNNNNTTYG 4 cut(s) 293, 325, 1356, 1388
Asp700I GAANNNNTTC 1 cut(s) 1947
AspLEI GCGC 4 cut(s) 13, 236, 417, 425
AspS9I GGNCC 5 cut(s) 256, 531, 566, 790, 1573
AsuC2I CCSGG 1 cut(s) 138
AsuHPI GGTGA 6 cut(s) 101, 612, 1004, 1273, 1322, 1820
AsuNHI GCTAGC 1 cut(s) 389
AvaII GGWCC 2 cut(s) 256, 1573
AxyI CCTNAGG 1 cut(s) 912
BalI TGGCCA 2 cut(s) 588, 1430
BanII GRGCYC 1 cut(s) 744
BauI CACGAG 1 cut(s) 193
BbrPI CACGTG 2 cut(s) 437, 2300
BbsI GAAGAC 1 cut(s) 272
Bbv12I GWGCWC 2 cut(s) 744, 2259
BbvI GCAGC 9 cut(s) 20, 613, 627, 748, 751, 965, 1505, 1762, 2143
BccI CCATC 4 cut(s) 166, 185, 235, 1241
BceAI ACGGC 1 cut(s) 107
BcgI CGANNNNNNTGC 4 cut(s) 1307, 1341, 2148, 2182
BciT130I CCWGG 6 cut(s) 260, 1224, 1484, 1577, 1860, 2153
BciVI GTATCC 1 cut(s) 2305
BclI TGATCA 2 cut(s) 1297, 1441
BcnI CCSGG 1 cut(s) 138
BcoDI GTCTC 3 cut(s) 338, 756, 2208
BfaI CTAG 4 cut(s) 390, 528, 1406, 2058
BfmI CTRYAG 4 cut(s) 456, 921, 2079, 2157
BfoI RGCGCY 2 cut(s) 14, 418
BfuI GTATCC 1 cut(s) 2305
BglII AGATCT 1 cut(s) 1498
BmcAI AGTACT 1 cut(s) 1129
Bme1390I CCNGG 7 cut(s) 138, 260, 1224, 1484, 1577, 1860, 2153
Bme18I GGWCC 2 cut(s) 256, 1573
BmgBI CACGTC 1 cut(s) 479
BmgT120I GGNCC 5 cut(s) 256, 531, 566, 790, 1573
BmiI GGNNCC 6 cut(s) 567, 663, 1354, 1574, 1652, 2055
BmrFI CCNGG 7 cut(s) 138, 260, 1224, 1484, 1577, 1860, 2153
BmrI ACTGGG 1 cut(s) 2033
BmsI GCATC 5 cut(s) 402, 776, 1714, 1877, 1966
BmtI GCTAGC 1 cut(s) 393
BmuI ACTGGG 1 cut(s) 2033
BpiI GAAGAC 1 cut(s) 272
BpmI CTGGAG 1 cut(s) 1227
BpuMI CCSGG 1 cut(s) 138
BsaAI YACGTR 2 cut(s) 437, 2300
BsaBI GATNNNNATC 2 cut(s) 1218, 1867
BsaJI CCNNGG 5 cut(s) 213, 719, 1223, 1431, 1670
BsaWI WCCGGW 3 cut(s) 673, 900, 1196
BsaXI ACNNNNNCTCC 6 cut(s) 801, 831, 1137, 1167, 1344, 1374
Bsc4I CCNNNNNNNGG 6 cut(s) 182, 564, 1039, 1223, 1489, 2063
Bse118I RCCGGY 1 cut(s) 792
Bse1I ACTGG 7 cut(s) 75, 445, 815, 1155, 1883, 2001, 2039
Bse21I CCTNAGG 1 cut(s) 912
Bse3DI GCAATG 2 cut(s) 636, 2013
Bse8I GATNNNNATC 2 cut(s) 1218, 1867
BseAI TCCGGA 2 cut(s) 673, 900
BseBI CCWGG 6 cut(s) 260, 1224, 1484, 1577, 1860, 2153
BseDI CCNNGG 5 cut(s) 213, 719, 1223, 1431, 1670
BseGI GGATG 7 cut(s) 158, 325, 441, 682, 1219, 1627, 1960
BseJI GATNNNNATC 2 cut(s) 1218, 1867
BseLI CCNNNNNNNGG 6 cut(s) 182, 564, 1039, 1223, 1489, 2063
BseMI GCAATG 2 cut(s) 636, 2013
BseMII CTCAG 5 cut(s) 729, 926, 1836, 2094, 2219
BseNI ACTGG 7 cut(s) 75, 445, 815, 1155, 1883, 2001, 2039
BseRI GAGGAG 5 cut(s) 716, 719, 1476, 1811, 2120
BseXI GCAGC 9 cut(s) 20, 613, 627, 748, 751, 965, 1505, 1762, 2143
BseYI CCCAGC 1 cut(s) 461
BsgI GTGCAG 1 cut(s) 851
Bsh1236I CGCG 4 cut(s) 114, 234, 285, 423
BshFI GGCC 8 cut(s) 93, 533, 568, 588, 792, 838, 1430, 1628
BsiHKAI GWGCWC 2 cut(s) 744, 2259
BsiSI CCGG 5 cut(s) 138, 674, 793, 901, 1197
BslFI GGGAC 1 cut(s) 25
BslI CCNNNNNNNGG 6 cut(s) 182, 564, 1039, 1223, 1489, 2063
BsmAI GTCTC 3 cut(s) 338, 756, 2208
BsmBI CGTCTC 1 cut(s) 756
BsmFI GGGAC 1 cut(s) 25
BsmI GAATGC 3 cut(s) 61, 600, 1687
BsnI GGCC 8 cut(s) 93, 533, 568, 588, 792, 838, 1430, 1628
Bsp1286I GDGCHC 2 cut(s) 744, 2259
Bsp13I TCCGGA 2 cut(s) 673, 900
Bsp143I GATC 7 cut(s) 382, 811, 1213, 1297, 1314, 1441, 1498
Bsp19I CCATGG 1 cut(s) 719
BspANI GGCC 8 cut(s) 93, 533, 568, 588, 792, 838, 1430, 1628
BspCNI CTCAG 5 cut(s) 730, 925, 1837, 2095, 2218
BspEI TCCGGA 2 cut(s) 673, 900
BspFNI CGCG 4 cut(s) 114, 234, 285, 423
BspHI TCATGA 1 cut(s) 270
BspLI GGNNCC 6 cut(s) 567, 663, 1354, 1574, 1652, 2055
BspMAI CTGCAG 2 cut(s) 2083, 2161
BspOI GCTAGC 1 cut(s) 393
BspPI GGATC 3 cut(s) 377, 806, 1208
BsrDI GCAATG 2 cut(s) 636, 2013
BsrFI RCCGGY 1 cut(s) 792
BsrI ACTGG 7 cut(s) 75, 445, 815, 1155, 1883, 2001, 2039
BssAI RCCGGY 1 cut(s) 792
BssECI CCNNGG 5 cut(s) 213, 719, 1223, 1431, 1670
BssMI GATC 7 cut(s) 382, 811, 1213, 1297, 1314, 1441, 1498
BssSI CACGAG 1 cut(s) 193
BssT1I CCWWGG 3 cut(s) 213, 719, 1431
Bst2BI CACGAG 1 cut(s) 193
Bst2UI CCWGG 6 cut(s) 260, 1224, 1484, 1577, 1860, 2153
Bst4CI ACNGT 7 cut(s) 309, 618, 856, 862, 1674, 1917, 2140
Bst6I CTCTTC 3 cut(s) 751, 963, 2251
BstBAI YACGTR 2 cut(s) 437, 2300
BstC8I GCNNGC 7 cut(s) 391, 570, 794, 1253, 1257, 1752, 2079
BstDEI CTNAG 5 cut(s) 738, 912, 1845, 2103, 2205
BstDSI CCRYGG 2 cut(s) 719, 1670
BstEII GGTNACC 1 cut(s) 1279
BstENI CCTNNNNNAGG 1 cut(s) 1037
BstF5I GGATG 7 cut(s) 158, 325, 441, 682, 1219, 1627, 1960
BstFNI CGCG 4 cut(s) 114, 234, 285, 423
BstH2I RGCGCY 2 cut(s) 14, 418
BstHHI GCGC 4 cut(s) 13, 236, 417, 425
BstKTI GATC 7 cut(s) 385, 814, 1216, 1300, 1317, 1444, 1501
BstMAI GTCTC 3 cut(s) 338, 756, 2208
BstMBI GATC 7 cut(s) 382, 811, 1213, 1297, 1314, 1441, 1498
BstMWI GCNNNNNNNGC 5 cut(s) 646, 715, 1502, 1904, 2074
BstNI CCWGG 6 cut(s) 260, 1224, 1484, 1577, 1860, 2153
BstPI GGTNACC 1 cut(s) 1279
BstSCI CCNGG 7 cut(s) 136, 258, 1222, 1482, 1575, 1858, 2151
BstSFI CTRYAG 4 cut(s) 456, 921, 2079, 2157
BstUI CGCG 4 cut(s) 114, 234, 285, 423
BstV1I GCAGC 9 cut(s) 20, 613, 627, 748, 751, 965, 1505, 1762, 2143
BstV2I GAAGAC 1 cut(s) 272
BstX2I RGATCY 2 cut(s) 811, 1498
BstYI RGATCY 2 cut(s) 811, 1498
Bsu36I CCTNAGG 1 cut(s) 912
BsuI GTATCC 1 cut(s) 2305
BsuRI GGCC 8 cut(s) 93, 533, 568, 588, 792, 838, 1430, 1628
BtgI CCRYGG 2 cut(s) 719, 1670
BtrI CACGTC 1 cut(s) 479
BtsCI GGATG 7 cut(s) 158, 325, 441, 682, 1219, 1627, 1960
BtsI GCAGTG 1 cut(s) 364
BtsIMutI CAGTG 2 cut(s) 364, 822
Cac8I GCNNGC 7 cut(s) 391, 570, 794, 1253, 1257, 1752, 2079
CaiI CAGNNNCTG 2 cut(s) 821, 860
CciI TCATGA 1 cut(s) 270
CfoI GCGC 4 cut(s) 13, 236, 417, 425
Cfr10I RCCGGY 1 cut(s) 792
Cfr13I GGNCC 5 cut(s) 256, 531, 566, 790, 1573
Csp6I GTAC 4 cut(s) 78, 1049, 1128, 1913
CspCI CAANNNNNGTGG 2 cut(s) 70, 105
CviAII CATG 5 cut(s) 271, 720, 1208, 1747, 2050
CviQI GTAC 4 cut(s) 78, 1049, 1128, 1913
DdeI CTNAG 5 cut(s) 738, 912, 1845, 2103, 2205
DpnI GATC 7 cut(s) 384, 813, 1215, 1299, 1316, 1443, 1500
DpnII GATC 7 cut(s) 382, 811, 1213, 1297, 1314, 1441, 1498
EaeI YGGCCR 2 cut(s) 586, 1428
Eam1104I CTCTTC 3 cut(s) 751, 963, 2251
EarI CTCTTC 3 cut(s) 751, 963, 2251
EciI GGCGGA 1 cut(s) 35
Ecl136II GAGCTC 1 cut(s) 742
Eco130I CCWWGG 3 cut(s) 213, 719, 1431
Eco147I AGGCCT 2 cut(s) 838, 1628
Eco24I GRGCYC 1 cut(s) 744
Eco32I GATATC 1 cut(s) 2172
Eco47I GGWCC 2 cut(s) 256, 1573
Eco53kI GAGCTC 1 cut(s) 742
Eco57I CTGAAG 1 cut(s) 2283
Eco72I CACGTG 2 cut(s) 437, 2300
Eco81I CCTNAGG 1 cut(s) 912
Eco91I GGTNACC 1 cut(s) 1279
EcoICRI GAGCTC 1 cut(s) 742
EcoNI CCTNNNNNAGG 1 cut(s) 1037
EcoO109I RGGNCCY 3 cut(s) 256, 566, 1573
EcoO65I GGTNACC 1 cut(s) 1279
EcoRII CCWGG 6 cut(s) 258, 1222, 1482, 1575, 1858, 2151
EcoRV GATATC 1 cut(s) 2172
EcoT14I CCWWGG 3 cut(s) 213, 719, 1431
EcoT38I GRGCYC 1 cut(s) 744
ErhI CCWWGG 3 cut(s) 213, 719, 1431
Esp3I CGTCTC 1 cut(s) 756
FaeI CATG 5 cut(s) 274, 723, 1211, 1750, 2053
FaqI GGGAC 1 cut(s) 25
FatI CATG 5 cut(s) 270, 719, 1207, 1746, 2049
FauI CCCGC 2 cut(s) 428, 631
FauNDI CATATG 1 cut(s) 1169
FbaI TGATCA 2 cut(s) 1297, 1441
FokI GGATG 7 cut(s) 145, 332, 428, 689, 1206, 1634, 1967
FriOI GRGCYC 1 cut(s) 744
FspBI CTAG 4 cut(s) 390, 528, 1406, 2058
GlaI GCGC 4 cut(s) 12, 235, 416, 424
GsaI CCCAGC 1 cut(s) 465
GsuI CTGGAG 1 cut(s) 1227
HaeII RGCGCY 2 cut(s) 14, 418
HaeIII GGCC 8 cut(s) 93, 533, 568, 588, 792, 838, 1430, 1628
HapII CCGG 5 cut(s) 138, 674, 793, 901, 1197
HhaI GCGC 4 cut(s) 13, 236, 417, 425
Hin1II CATG 5 cut(s) 274, 723, 1211, 1750, 2053
Hin6I GCGC 4 cut(s) 11, 234, 415, 423
HinP1I GCGC 4 cut(s) 11, 234, 415, 423
HincII GTYRAC 1 cut(s) 1290
HindII GTYRAC 1 cut(s) 1290
HindIII AAGCTT 3 cut(s) 647, 1253, 1376
HpaII CCGG 5 cut(s) 138, 674, 793, 901, 1197
HphI GGTGA 6 cut(s) 101, 612, 1004, 1273, 1322, 1820
Hpy166II GTNNAC 1 cut(s) 1290
Hpy188I TCNGA 7 cut(s) 203, 739, 1145, 1302, 1873, 1921, 1940
Hpy8I GTNNAC 1 cut(s) 1290
Hpy99I CGWCG 1 cut(s) 128
HpyAV CCTTC 8 cut(s) 104, 292, 675, 1043, 1100, 1448, 1574, 1865
HpyCH4III ACNGT 7 cut(s) 309, 618, 856, 862, 1674, 1917, 2140
HpyCH4IV ACGT 3 cut(s) 436, 478, 2299
HpyF10VI GCNNNNNNNGC 5 cut(s) 646, 715, 1502, 1904, 2074
HpyF3I CTNAG 5 cut(s) 738, 912, 1845, 2103, 2205
HpySE526I ACGT 3 cut(s) 436, 478, 2299
Hsp92II CATG 5 cut(s) 274, 723, 1211, 1750, 2053
HspAI GCGC 4 cut(s) 11, 234, 415, 423
Kpn2I TCCGGA 2 cut(s) 673, 900
KroI GCCGGC 1 cut(s) 792
KroNI GCCGGC 1 cut(s) 794
Ksp22I TGATCA 2 cut(s) 1297, 1441
Kzo9I GATC 7 cut(s) 382, 811, 1213, 1297, 1314, 1441, 1498
LmnI GCTCC 6 cut(s) 637, 706, 1352, 1463, 1656, 2262
Lsp1109I GCAGC 9 cut(s) 20, 613, 627, 748, 751, 965, 1505, 1762, 2143
LweI GCATC 5 cut(s) 402, 776, 1714, 1877, 1966
MaeI CTAG 4 cut(s) 390, 528, 1406, 2058
MaeII ACGT 3 cut(s) 436, 478, 2299
MalI GATC 7 cut(s) 384, 813, 1215, 1299, 1316, 1443, 1500
MboI GATC 7 cut(s) 382, 811, 1213, 1297, 1314, 1441, 1498
MboII GAAGA 7 cut(s) 257, 272, 738, 980, 1940, 2216, 2238
MfeI CAATTG 3 cut(s) 756, 1323, 1566
MflI RGATCY 2 cut(s) 811, 1498
MhlI GDGCHC 2 cut(s) 744, 2259
MlsI TGGCCA 2 cut(s) 588, 1430
MluNI TGGCCA 2 cut(s) 588, 1430
MlyI GAGTC 4 cut(s) 47, 296, 1173, 2124
MmeI TCCRAC 3 cut(s) 913, 1123, 1141
Mox20I TGGCCA 2 cut(s) 588, 1430
MroI TCCGGA 2 cut(s) 673, 900
MroNI GCCGGC 1 cut(s) 792
MroXI GAANNNNTTC 1 cut(s) 1947
MscI TGGCCA 2 cut(s) 588, 1430
MseI TTAA 7 cut(s) 498, 825, 984, 1401, 1530, 1676, 2195
Msp20I TGGCCA 2 cut(s) 588, 1430
MspA1I CMGCKG 2 cut(s) 19, 626
MspI CCGG 5 cut(s) 138, 674, 793, 901, 1197
MspR9I CCNGG 7 cut(s) 138, 260, 1224, 1484, 1577, 1860, 2153
MunI CAATTG 3 cut(s) 756, 1323, 1566
Mva1269I GAATGC 3 cut(s) 61, 600, 1687
MvaI CCWGG 6 cut(s) 260, 1224, 1484, 1577, 1860, 2153
MvnI CGCG 4 cut(s) 114, 234, 285, 423
MwoI GCNNNNNNNGC 5 cut(s) 646, 715, 1502, 1904, 2074
NaeI GCCGGC 1 cut(s) 794
NciI CCSGG 1 cut(s) 138
NcoI CCATGG 1 cut(s) 719
NdeI CATATG 1 cut(s) 1169
NdeII GATC 7 cut(s) 382, 811, 1213, 1297, 1314, 1441, 1498
NgoMIV GCCGGC 1 cut(s) 792
NheI GCTAGC 1 cut(s) 389
NlaIII CATG 5 cut(s) 274, 723, 1211, 1750, 2053
NlaIV GGNNCC 6 cut(s) 567, 663, 1354, 1574, 1652, 2055
NmeAIII GCCGAG 1 cut(s) 1753
NmuCI GTSAC 6 cut(s) 430, 553, 618, 1279, 1343, 2283
PagI TCATGA 1 cut(s) 270
PceI AGGCCT 2 cut(s) 838, 1628
PctI GAATGC 3 cut(s) 61, 600, 1687
PdiI GCCGGC 1 cut(s) 794
PdmI GAANNNNTTC 1 cut(s) 1947
PfeI GAWTC 6 cut(s) 33, 167, 198, 1234, 1664, 2022
PflFI GACNNNGTC 1 cut(s) 1370
PflMI CCANNNNNTGG 1 cut(s) 1489
PfoI TCCNGGA 3 cut(s) 1482, 1575, 1858
PleI GAGTC 4 cut(s) 46, 296, 1172, 2123
PmaCI CACGTG 2 cut(s) 437, 2300
PmlI CACGTG 2 cut(s) 437, 2300
PpsI GAGTC 4 cut(s) 46, 296, 1172, 2123
Ppu21I YACGTR 2 cut(s) 437, 2300
PpuMI RGGWCCY 2 cut(s) 256, 1573
PsiI TTATAA 1 cut(s) 1556
Psp124BI GAGCTC 1 cut(s) 744
Psp5II RGGWCCY 2 cut(s) 256, 1573
Psp6I CCWGG 6 cut(s) 258, 1222, 1482, 1575, 1858, 2151
PspCI CACGTG 2 cut(s) 437, 2300
PspEI GGTNACC 1 cut(s) 1279
PspFI CCCAGC 1 cut(s) 461
PspGI CCWGG 6 cut(s) 258, 1222, 1482, 1575, 1858, 2151
PspN4I GGNNCC 6 cut(s) 567, 663, 1354, 1574, 1652, 2055
PspPI GGNCC 5 cut(s) 256, 531, 566, 790, 1573
PspPPI RGGWCCY 2 cut(s) 256, 1573
PstI CTGCAG 2 cut(s) 2083, 2161
PstNI CAGNNNCTG 2 cut(s) 821, 860
PsuI RGATCY 2 cut(s) 811, 1498
PsyI GACNNNGTC 1 cut(s) 1370
PvuII CAGCTG 1 cut(s) 19
RsaI GTAC 4 cut(s) 79, 1050, 1129, 1914
RsaNI GTAC 4 cut(s) 78, 1049, 1128, 1913
SacI GAGCTC 1 cut(s) 744
SaqAI TTAA 7 cut(s) 498, 825, 984, 1401, 1530, 1676, 2195
Sau3AI GATC 7 cut(s) 382, 811, 1213, 1297, 1314, 1441, 1498
Sau96I GGNCC 5 cut(s) 256, 531, 566, 790, 1573
SbfI CCTGCAGG 1 cut(s) 2083
ScaI AGTACT 1 cut(s) 1129
SchI GAGTC 4 cut(s) 47, 296, 1173, 2124
ScrFI CCNGG 7 cut(s) 138, 260, 1224, 1484, 1577, 1860, 2153
SdaI CCTGCAGG 1 cut(s) 2083
SduI GDGCHC 2 cut(s) 744, 2259
SfaNI GCATC 5 cut(s) 402, 776, 1714, 1877, 1966
SfcI CTRYAG 4 cut(s) 456, 921, 2079, 2157
SinI GGWCC 2 cut(s) 256, 1573
Sse8387I CCTGCAGG 1 cut(s) 2083
SseBI AGGCCT 2 cut(s) 838, 1628
SspMI CTAG 4 cut(s) 390, 528, 1406, 2058
SstI GAGCTC 1 cut(s) 744
StuI AGGCCT 2 cut(s) 838, 1628
StyD4I CCNGG 7 cut(s) 136, 258, 1222, 1482, 1575, 1858, 2151
StyI CCWWGG 3 cut(s) 213, 719, 1431
TaaI ACNGT 7 cut(s) 309, 618, 856, 862, 1674, 1917, 2140
TaiI ACGT 3 cut(s) 439, 481, 2302
TaqI TCGA 7 cut(s) 26, 36, 604, 1191, 1317, 2145, 2168
TatI WGTACW 2 cut(s) 1127, 1912
TauI GCSGC 3 cut(s) 51, 488, 1901
TfiI GAWTC 6 cut(s) 33, 167, 198, 1234, 1664, 2022
Tru1I TTAA 7 cut(s) 498, 825, 984, 1401, 1530, 1676, 2195
Tru9I TTAA 7 cut(s) 498, 825, 984, 1401, 1530, 1676, 2195
TscAI CASTG 2 cut(s) 364, 822
TseFI GTSAC 6 cut(s) 430, 553, 618, 1279, 1343, 2283
TseI GCWGC 9 cut(s) 8, 626, 640, 761, 764, 953, 1493, 1775, 2156
Tsp45I GTSAC 6 cut(s) 430, 553, 618, 1279, 1343, 2283
TspGWI ACGGA 3 cut(s) 650, 822, 895
TspRI CASTG 2 cut(s) 364, 822
Tth111I GACNNNGTC 1 cut(s) 1370
Van91I CCANNNNNTGG 1 cut(s) 1489
VpaK11BI GGWCC 2 cut(s) 256, 1573
XagI CCTNNNNNAGG 1 cut(s) 1037
XapI RAATTY 4 cut(s) 292, 362, 1228, 1943
XbaI TCTAGA 1 cut(s) 1405
XmnI GAANNNNTTC 1 cut(s) 1947
XspI CTAG 4 cut(s) 390, 528, 1406, 2058
ZrmI AGTACT 1 cut(s) 1129
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.