Prupe.1G002700_v2.0.a1

AarF domain-containing protein kinase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
288901 .. 299358
10458 bp
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UTR
Exon/CDS
Intron
Prupe.1G002700.5

Sequence Viewer

Length: 2436 bp
ATGGACGCAGCGCCACAGCTCGTCTGCAGCGGAATCTGCGAACCCCTTCGTCGCATCTCCATTTCCAAACATTCCTTCTCCAACGCTAGAGTTCGGTTTCCCAAACGAATTAACCGCGTTTTGGCGGTTGCCACTGAGCCCAAACCCGCTCCCTCCGGGCCGCCAAGCACCACCAACGCCTCCTCGCAGACTCCGCCAGTCAATGGAGTTGTTTCTAACGGATCAAAACCGAAATCTCCTTTGCCTAACACCGTCAATGGCTCCTCGAGGTCTCCGACATCAAAACCTATCAATGGAGTTTCCACGAGAATTGGAGATGTTTCAAAGGAAATAAAAAGAGTGAGGGCCCAGATGGAAGAAAACGAAGACTTGGCAATACTCATGAGAGGTCTCCGGGGACAAAATTTAAAGGATTCACAGTTCGCTGAAGATGATGTTGAGCTTCGCCTTGTTGAGGTAGACGAAAGCAGTGAATTTTTGCCCTTGGTATATGATCCTGATAGTATCTCTGCTTATTGGGGAAAACGGCCACGTGCTGTTTTGACACGTATAACCCAATTACTCTCTGTTGCTGGGGGTTTTCTCTCGCATCTCGTGTGGGATATTATAAACAAGACGGTCAAGGAGAATGAGGTTGCTAGAGCCATTGAATTAAGAGAAATTGTAACCTCTTTGGGTCCTGCATATATCAAACTTGGGCAAGCATTGAGCATTCGACCAGATGTACTATCACCAGCTGCAATGACTGAGCTACAAAAGCTTTGTGATAAGGTTCCTTCATTTCCAGATGATATAGCTATGGCTCTGATTGAGGAGGAGCTTGGTCAGCCATGGCCTAACATCTACTCTGAGCTTTCTTCTTCTCCAATTGCTGCTGCATCTCTCGGGCAAGTATATAAGGGACGGCTGAGAGAAAATGGAGATATTGTGGCTGTTAAAGTGCAGAGGCCTTTTGTTCTTGAAACAGTAACTGTTGATTTGTTTGTCATACGAAACTTGGGTTTGGTTCTGCGGAAGTTTCCTCAGATCTCTATAGATGTAGTTGGATTAGTTGATGAATGGGCAGCTCGATTTTTTGAAGAGCTGGATTATGTTAATGAGGGTGAAAATGGAACACTCTTTGCTGAAATGATGAGGAAAGACCTTCCACAGGTAGTTGTACCTAAAACCTACCAGAAATATACTTCAAGAAAGGTTCTTACTACAGGATGGGTAGATGGAGAGAAGTTATCACAGAGTACTGAAAGTGATGTTGGAGAACTAGTTAATGTTGGAGTCATATGCTACCTGAAGCAGTTGCTTGATACTGGATTTTTTCATGCTGATCCTCATCCTGGGAATATGATTCGTACTCCAGATGGGAAGCTTGCCATACTTGATTTTGGTCTTGTTACTAAATTAAGTGATGATCAGAAGTATGGAATGATTGAGGCAATTGCTCACCTTATTCATCGTGATTATGGAGCCATAGTCAAAGACTTTGTTAAACTTGAATTTATTTCAGAGGGGGTTAATCTAGAACCTATTTTGCCTGTTCTGGCCAAGGTTTTTGATCAGGCTCTTGAAGGTGGAGGAGCAAAAAATATCAACTTCCAGGAGTTGGCATCAGATTTGGCTCAAATCACATTTGACTATCCATTTAGGATACCCCCTTATTTTGCTCTTATAATTAGGGCAATTGGGGTCCTGGAAGGCATAGCTTTAGTAGGAAATCCCGATTTTGCCATTGTGGACGAGGCCTATCCGTATATTGCCCAGAGGCTCCTGACTGATGAATCCCCAAGGCTAAGGAGTGCTTTACGTTACACAATATATGGGAAATCTGGAGTTTTTGATGCGGAGAGATTTATTGATGTCATGCAAGCCTTTGAAACTTTCATAACAGCTGCTAAAAGTGGAGGTGGAGAGGAATTGAGTGGTGATATGGCAGAACTTGGCATTCTGCAAGGTCAAACAGAGAATGCCTTCCCTGGGTTTCTGTCAAATGGGCCACCAGTACAAACAAGGGCGGCTTTAGCATTTTTACTGTCTGACAAAGGGAACTTTTTCAGAGAATTTCTTCTGGATGAGATTGTTAAGGGCATTGATGCAGTTACAAGGGAACAATTGGTTCGTGTTATGGCAATTCTTGGTTTTGGTAATGCTACCCCAGTTTTCAGCATGGTTCCTACTTTTGGGCTATTCAAGCCAGCAGGACTTCTACCAACAATCACAGAGGAGGATAGAGTTATATTGAACAATGTCCAAACAATACTCGAGTTCCTGACTGCAGGAAGTTCCCTATCACAAACATCAAATCAGGGTTTTAATGTGTCTCAGGTTATCCAAGAGCTTCTTCCAGTTTTGCCCAGCATCTCTTCCAAAGTGCTCCCTGAAGTGCTCAGTCGATTATCTTCACGGGTATTAGCACGTGTGATTCGAGATACAATTTGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

812

Amino Acids

89.06

Weight (kDa)

5.21

Isoelectric Point (pI)

36.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 608, 1667
AbsI CCTCGAGG 1 cut(s) 265
AccB7I CCANNNNNTGG 2 cut(s) 203, 1600
AccBSI CCGCTC 1 cut(s) 149
AccI GTMKAC 1 cut(s) 459
AccII CGCG 1 cut(s) 117
AciI CCGC 9 cut(s) 30, 115, 125, 147, 161, 194, 1012, 1838, 2009
AclWI GGATC 3 cut(s) 229, 488, 1319
AcoI YGGCCR 2 cut(s) 527, 1539
AcsI RAATTY 4 cut(s) 403, 473, 1493, 2054
AcuI CTGAAG 3 cut(s) 447, 1310, 2394
AcvI CACGTG 2 cut(s) 533, 2411
AfaI GTAC 5 cut(s) 726, 1161, 1240, 1351, 1998
AfiI CCNNNNNNNGG 9 cut(s) 121, 203, 293, 454, 1150, 1334, 1600, 1971, 2174
AflIII ACRYGT 2 cut(s) 545, 2410
AhlI ACTAGT 1 cut(s) 1261
AjnI CCWGG 4 cut(s) 1333, 1593, 1686, 1969
AjuI GAANNNNNNNTTGG 6 cut(s) 59, 91, 1236, 1268, 2319, 2351
AloI GAACNNNNNNTCC 2 cut(s) 404, 436
Alw21I GWGCWC 2 cut(s) 2370, 2382
Alw26I GTCTC 3 cut(s) 276, 395, 2319
AlwI GGATC 3 cut(s) 229, 488, 1319
AlwNI CAGNNNCTG 1 cut(s) 971
Ama87I CYCGRG 3 cut(s) 265, 884, 2255
AoxI GGCC 8 cut(s) 158, 345, 527, 833, 947, 1539, 1737, 1988
ApaI GGGCCC 1 cut(s) 349
ApeKI GCWGC 7 cut(s) 8, 27, 737, 872, 875, 1064, 1886
ApoI RAATTY 4 cut(s) 403, 473, 1493, 2054
Asp700I GAANNNNTTC 4 cut(s) 45, 1964, 2045, 2058
AspLEI GCGC 1 cut(s) 13
AspS9I GGNCC 6 cut(s) 158, 345, 346, 677, 1684, 1988
AsuC2I CCSGG 2 cut(s) 157, 395
AsuHPI GGTGA 4 cut(s) 723, 1115, 1433, 1931
AvaI CYCGRG 3 cut(s) 265, 884, 2255
AvaII GGWCC 2 cut(s) 677, 1684
BaeGI GKGCMC 1 cut(s) 349
BalI TGGCCA 1 cut(s) 1541
BanII GRGCYC 2 cut(s) 141, 349
BauI CACGAG 2 cut(s) 304, 593
BbrPI CACGTG 2 cut(s) 533, 2411
BbsI GAAGAC 1 cut(s) 372
Bbv12I GWGCWC 2 cut(s) 2370, 2382
BbvI GCAGC 7 cut(s) 20, 39, 724, 859, 862, 1076, 1873
BccI CCATC 4 cut(s) 346, 1203, 1211, 1352
BceAI ACGGC 2 cut(s) 542, 920
BciT130I CCWGG 4 cut(s) 1335, 1595, 1688, 1971
BciVI GTATCC 1 cut(s) 1638
BclI TGATCA 2 cut(s) 1408, 1552
BcnI CCSGG 2 cut(s) 157, 395
BcoDI GTCTC 3 cut(s) 276, 395, 2319
BcuI ACTAGT 1 cut(s) 1261
BfaI CTAG 4 cut(s) 87, 639, 1262, 1517
BfmI CTRYAG 4 cut(s) 25, 1032, 1203, 2268
BfoI RGCGCY 1 cut(s) 14
BfuI GTATCC 1 cut(s) 1638
BglII AGATCT 1 cut(s) 1026
BisI GCNGC 9 cut(s) 9, 28, 161, 738, 873, 876, 1065, 1887, 2010
BlsI GCNGC 9 cut(s) 10, 29, 162, 739, 874, 877, 1066, 1888, 2011
BmcAI AGTACT 1 cut(s) 1240
Bme1390I CCNGG 6 cut(s) 157, 395, 1335, 1595, 1688, 1971
Bme18I GGWCC 2 cut(s) 677, 1684
BmeT110I CYCGRG 3 cut(s) 265, 884, 2255
BmgT120I GGNCC 6 cut(s) 158, 345, 346, 677, 1684, 1988
BmiI GGNNCC 8 cut(s) 262, 347, 678, 774, 1465, 1685, 1763, 2166
BmrFI CCNGG 6 cut(s) 157, 395, 1335, 1595, 1688, 1971
BmrI ACTGGG 1 cut(s) 2144
BmsI GCATC 7 cut(s) 63, 598, 887, 1613, 1825, 2077, 2361
BmuI ACTGGG 1 cut(s) 2144
BpiI GAAGAC 1 cut(s) 372
BpmI CTGGAG 2 cut(s) 1338, 1845
Bpu10I CCTNAGC 1 cut(s) 1787
BpuMI CCSGG 2 cut(s) 157, 395
BsaAI YACGTR 3 cut(s) 533, 548, 2411
BsaBI GATNNNNATC 1 cut(s) 1329
BsaI GGTCTC 2 cut(s) 276, 395
BsaJI CCNNGG 8 cut(s) 394, 483, 830, 1334, 1542, 1781, 1969, 1970
BsaXI ACNNNNNCTCC 6 cut(s) 912, 942, 1248, 1278, 1455, 1485
Bsc4I CCNNNNNNNGG 9 cut(s) 121, 203, 293, 454, 1150, 1334, 1600, 1971, 2174
Bse1I ACTGG 5 cut(s) 197, 1312, 1994, 2150, 2339
Bse3DI GCAATG 1 cut(s) 747
Bse8I GATNNNNATC 1 cut(s) 1329
BseBI CCWGG 4 cut(s) 1335, 1595, 1688, 1971
BseDI CCNNGG 8 cut(s) 394, 483, 830, 1334, 1542, 1781, 1969, 1970
BseGI GGATG 3 cut(s) 1214, 1330, 2071
BseJI GATNNNNATC 1 cut(s) 1329
BseLI CCNNNNNNNGG 9 cut(s) 121, 203, 293, 454, 1150, 1334, 1600, 1971, 2174
BseMI GCAATG 1 cut(s) 747
BseMII CTCAG 7 cut(s) 126, 738, 840, 899, 1037, 2330, 2395
BseNI ACTGG 5 cut(s) 197, 1312, 1994, 2150, 2339
BseRI GAGGAG 6 cut(s) 172, 253, 827, 830, 1587, 2231
BseSI GKGCMC 1 cut(s) 349
BseXI GCAGC 7 cut(s) 20, 39, 724, 859, 862, 1076, 1873
BseYI CCCAGC 2 cut(s) 572, 2348
BsgI GTGCAG 1 cut(s) 962
Bsh1236I CGCG 1 cut(s) 117
BshFI GGCC 8 cut(s) 160, 347, 529, 835, 949, 1541, 1739, 1990
BsiHKAI GWGCWC 2 cut(s) 2370, 2382
BsiHKCI CYCGRG 3 cut(s) 265, 884, 2255
BsiSI CCGG 2 cut(s) 156, 394
BslFI GGGAC 2 cut(s) 411, 915
BslI CCNNNNNNNGG 9 cut(s) 121, 203, 293, 454, 1150, 1334, 1600, 1971, 2174
BsmAI GTCTC 3 cut(s) 276, 395, 2319
BsmFI GGGAC 2 cut(s) 411, 915
BsmI GAATGC 3 cut(s) 711, 1938, 1966
BsnI GGCC 8 cut(s) 160, 347, 529, 835, 949, 1541, 1739, 1990
Bso31I GGTCTC 2 cut(s) 276, 395
BsoBI CYCGRG 3 cut(s) 265, 884, 2255
Bsp120I GGGCCC 1 cut(s) 345
Bsp1286I GDGCHC 4 cut(s) 141, 349, 2370, 2382
Bsp143I GATC 6 cut(s) 221, 493, 1026, 1324, 1408, 1552
Bsp19I CCATGG 1 cut(s) 830
BspACI CCGC 9 cut(s) 30, 115, 125, 147, 161, 194, 1012, 1838, 2009
BspANI GGCC 8 cut(s) 160, 347, 529, 835, 949, 1541, 1739, 1990
BspCNI CTCAG 7 cut(s) 127, 739, 841, 900, 1036, 2329, 2394
BspFNI CGCG 1 cut(s) 117
BspHI TCATGA 1 cut(s) 381
BspLI GGNNCC 8 cut(s) 262, 347, 678, 774, 1465, 1685, 1763, 2166
BspMAI CTGCAG 2 cut(s) 29, 2272
BspPI GGATC 3 cut(s) 229, 488, 1319
BspQI GCTCTTC 1 cut(s) 1074
BspTNI GGTCTC 2 cut(s) 276, 395
BsrBI CCGCTC 1 cut(s) 149
BsrDI GCAATG 1 cut(s) 747
BsrI ACTGG 5 cut(s) 197, 1312, 1994, 2150, 2339
BssECI CCNNGG 8 cut(s) 394, 483, 830, 1334, 1542, 1781, 1969, 1970
BssMI GATC 6 cut(s) 221, 493, 1026, 1324, 1408, 1552
BssSI CACGAG 2 cut(s) 304, 593
BssT1I CCWWGG 4 cut(s) 483, 830, 1542, 1781
Bst2BI CACGAG 2 cut(s) 304, 593
Bst2UI CCWGG 4 cut(s) 1335, 1595, 1688, 1971
Bst4CI ACNGT 6 cut(s) 253, 420, 619, 967, 973, 2028
Bst6I CTCTTC 2 cut(s) 1074, 2362
BstBAI YACGTR 3 cut(s) 533, 548, 2411
BstC8I GCNNGC 4 cut(s) 702, 1368, 1863, 2190
BstDEI CTNAG 8 cut(s) 135, 747, 849, 908, 1023, 1787, 2316, 2381
BstDSI CCRYGG 1 cut(s) 830
BstENI CCTNNNNNAGG 2 cut(s) 452, 1148
BstF5I GGATG 3 cut(s) 1214, 1330, 2071
BstFNI CGCG 1 cut(s) 117
BstH2I RGCGCY 1 cut(s) 14
BstHHI GCGC 1 cut(s) 13
BstKTI GATC 6 cut(s) 224, 496, 1029, 1327, 1411, 1555
BstMAI GTCTC 3 cut(s) 276, 395, 2319
BstMBI GATC 6 cut(s) 221, 493, 1026, 1324, 1408, 1552
BstMWI GCNNNNNNNGC 6 cut(s) 36, 193, 757, 826, 2015, 2185
BstNI CCWGG 4 cut(s) 1335, 1595, 1688, 1971
BstSCI CCNGG 6 cut(s) 155, 393, 1333, 1593, 1686, 1969
BstSFI CTRYAG 4 cut(s) 25, 1032, 1203, 2268
BstSLI GKGCMC 1 cut(s) 349
BstUI CGCG 1 cut(s) 117
BstV1I GCAGC 7 cut(s) 20, 39, 724, 859, 862, 1076, 1873
BstV2I GAAGAC 1 cut(s) 372
BstX2I RGATCY 1 cut(s) 1026
BstYI RGATCY 1 cut(s) 1026
BsuI GTATCC 1 cut(s) 1638
BsuRI GGCC 8 cut(s) 160, 347, 529, 835, 949, 1541, 1739, 1990
BtgI CCRYGG 1 cut(s) 830
BtsCI GGATG 3 cut(s) 1214, 1330, 2071
BtsI GCAGTG 1 cut(s) 475
BtsIMutI CAGTG 2 cut(s) 132, 475
Cac8I GCNNGC 4 cut(s) 702, 1368, 1863, 2190
CaiI CAGNNNCTG 1 cut(s) 971
CciI TCATGA 1 cut(s) 381
CfoI GCGC 1 cut(s) 13
Cfr13I GGNCC 6 cut(s) 158, 345, 346, 677, 1684, 1988
CseI GACGC 1 cut(s) 14
Csp6I GTAC 5 cut(s) 725, 1160, 1239, 1350, 1997
CspCI CAANNNNNGTGG 2 cut(s) 292, 327
CviAII CATG 5 cut(s) 382, 831, 1319, 1858, 2161
CviQI GTAC 5 cut(s) 725, 1160, 1239, 1350, 1997
DdeI CTNAG 8 cut(s) 135, 747, 849, 908, 1023, 1787, 2316, 2381
DpnI GATC 6 cut(s) 223, 495, 1028, 1326, 1410, 1554
DpnII GATC 6 cut(s) 221, 493, 1026, 1324, 1408, 1552
DraI TTTAAA 1 cut(s) 408
EaeI YGGCCR 2 cut(s) 527, 1539
Eam1104I CTCTTC 2 cut(s) 1074, 2362
EarI CTCTTC 2 cut(s) 1074, 2362
EciI GGCGGA 1 cut(s) 183
Eco130I CCWWGG 4 cut(s) 483, 830, 1542, 1781
Eco147I AGGCCT 2 cut(s) 949, 1739
Eco24I GRGCYC 2 cut(s) 141, 349
Eco31I GGTCTC 2 cut(s) 276, 395
Eco47I GGWCC 2 cut(s) 677, 1684
Eco57I CTGAAG 3 cut(s) 447, 1310, 2394
Eco72I CACGTG 2 cut(s) 533, 2411
Eco88I CYCGRG 3 cut(s) 265, 884, 2255
EcoNI CCTNNNNNAGG 2 cut(s) 452, 1148
EcoO109I RGGNCCY 3 cut(s) 345, 677, 1684
EcoRII CCWGG 4 cut(s) 1333, 1593, 1686, 1969
EcoT14I CCWWGG 4 cut(s) 483, 830, 1542, 1781
EcoT38I GRGCYC 2 cut(s) 141, 349
ErhI CCWWGG 4 cut(s) 483, 830, 1542, 1781
FaeI CATG 5 cut(s) 385, 834, 1322, 1861, 2164
FalI AAGNNNNNCTT 6 cut(s) 1780, 1812, 1996, 2028, 2319, 2351
FaqI GGGAC 2 cut(s) 411, 915
FatI CATG 5 cut(s) 381, 830, 1318, 1857, 2160
FauI CCCGC 1 cut(s) 154
FauNDI CATATG 1 cut(s) 1280
FbaI TGATCA 2 cut(s) 1408, 1552
FblI GTMKAC 1 cut(s) 459
Fnu4HI GCNGC 9 cut(s) 9, 28, 161, 738, 873, 876, 1065, 1887, 2010
FokI GGATG 3 cut(s) 1221, 1317, 2078
FriOI GRGCYC 2 cut(s) 141, 349
Fsp4HI GCNGC 9 cut(s) 9, 28, 161, 738, 873, 876, 1065, 1887, 2010
FspBI CTAG 4 cut(s) 87, 639, 1262, 1517
GlaI GCGC 1 cut(s) 12
GluI GCNGC 9 cut(s) 9, 28, 161, 738, 873, 876, 1065, 1887, 2010
GsaI CCCAGC 2 cut(s) 576, 2352
GsuI CTGGAG 2 cut(s) 1338, 1845
HaeII RGCGCY 1 cut(s) 14
HaeIII GGCC 8 cut(s) 160, 347, 529, 835, 949, 1541, 1739, 1990
HapII CCGG 2 cut(s) 156, 394
HgaI GACGC 1 cut(s) 14
HhaI GCGC 1 cut(s) 13
Hin1II CATG 5 cut(s) 385, 834, 1322, 1861, 2164
Hin6I GCGC 1 cut(s) 11
HinP1I GCGC 1 cut(s) 11
HindIII AAGCTT 2 cut(s) 758, 1364
HinfI GANTC 7 cut(s) 33, 190, 413, 1275, 1345, 1775, 2416
HpaII CCGG 2 cut(s) 156, 394
HphI GGTGA 4 cut(s) 723, 1115, 1433, 1931
Hpy166II GTNNAC 2 cut(s) 460, 1732
Hpy188I TCNGA 9 cut(s) 276, 807, 850, 1026, 1413, 1504, 1609, 2032, 2051
Hpy8I GTNNAC 2 cut(s) 460, 1732
Hpy99I CGWCG 1 cut(s) 54
HpyAV CCTTC 7 cut(s) 56, 85, 786, 1154, 1559, 1685, 1975
HpyCH4III ACNGT 6 cut(s) 253, 420, 619, 967, 973, 2028
HpyCH4IV ACGT 4 cut(s) 532, 547, 1801, 2410
HpyCH4V TGCA 9 cut(s) 27, 683, 740, 878, 943, 1861, 1945, 2090, 2270
HpyF10VI GCNNNNNNNGC 6 cut(s) 36, 193, 757, 826, 2015, 2185
HpyF3I CTNAG 8 cut(s) 135, 747, 849, 908, 1023, 1787, 2316, 2381
HpySE526I ACGT 4 cut(s) 532, 547, 1801, 2410
Hsp92II CATG 5 cut(s) 385, 834, 1322, 1861, 2164
HspAI GCGC 1 cut(s) 11
Ksp22I TGATCA 2 cut(s) 1408, 1552
Kzo9I GATC 6 cut(s) 221, 493, 1026, 1324, 1408, 1552
LguI GCTCTTC 1 cut(s) 1074
LmnI GCTCC 7 cut(s) 154, 266, 817, 1463, 1574, 1767, 2373
Lsp1109I GCAGC 7 cut(s) 20, 39, 724, 859, 862, 1076, 1873
LweI GCATC 7 cut(s) 63, 598, 887, 1613, 1825, 2077, 2361
MaeI CTAG 4 cut(s) 87, 639, 1262, 1517
MaeII ACGT 4 cut(s) 532, 547, 1801, 2410
MaeIII GTNAC 5 cut(s) 664, 967, 1390, 1802, 2092
MalI GATC 6 cut(s) 223, 495, 1028, 1326, 1410, 1554
MbiI CCGCTC 1 cut(s) 149
MboI GATC 6 cut(s) 221, 493, 1026, 1324, 1408, 1552
MfeI CAATTG 4 cut(s) 867, 1434, 1677, 2105
MflI RGATCY 1 cut(s) 1026
MhlI GDGCHC 4 cut(s) 141, 349, 2370, 2382
MlsI TGGCCA 1 cut(s) 1541
MluNI TGGCCA 1 cut(s) 1541
MlyI GAGTC 2 cut(s) 184, 1284
MmeI TCCRAC 5 cut(s) 105, 299, 1024, 1234, 1252
Mox20I TGGCCA 1 cut(s) 1541
MroXI GAANNNNTTC 4 cut(s) 45, 1964, 2045, 2058
MscI TGGCCA 1 cut(s) 1541
Msp20I TGGCCA 1 cut(s) 1541
MspA1I CMGCKG 3 cut(s) 30, 737, 1886
MspI CCGG 2 cut(s) 156, 394
MspR9I CCNGG 6 cut(s) 157, 395, 1335, 1595, 1688, 1971
MunI CAATTG 4 cut(s) 867, 1434, 1677, 2105
Mva1269I GAATGC 3 cut(s) 711, 1938, 1966
MvaI CCWGG 4 cut(s) 1335, 1595, 1688, 1971
MvnI CGCG 1 cut(s) 117
MwoI GCNNNNNNNGC 6 cut(s) 36, 193, 757, 826, 2015, 2185
NciI CCSGG 2 cut(s) 157, 395
NcoI CCATGG 1 cut(s) 830
NdeI CATATG 1 cut(s) 1280
NdeII GATC 6 cut(s) 221, 493, 1026, 1324, 1408, 1552
NlaIII CATG 5 cut(s) 385, 834, 1322, 1861, 2164
NlaIV GGNNCC 8 cut(s) 262, 347, 678, 774, 1465, 1685, 1763, 2166
PaeR7I CTCGAG 2 cut(s) 265, 2255
PagI TCATGA 1 cut(s) 381
PasI CCCWGGG 1 cut(s) 1970
PceI AGGCCT 2 cut(s) 949, 1739
PciSI GCTCTTC 1 cut(s) 1074
PcsI WCGNNNNNNNCGW 2 cut(s) 272, 2416
PctI GAATGC 3 cut(s) 711, 1938, 1966
PdmI GAANNNNTTC 4 cut(s) 45, 1964, 2045, 2058
PfeI GAWTC 5 cut(s) 33, 413, 1345, 1775, 2416
PflMI CCANNNNNTGG 2 cut(s) 203, 1600
PfoI TCCNGGA 2 cut(s) 1593, 1686
PkrI GCNGC 9 cut(s) 10, 29, 162, 739, 874, 877, 1066, 1888, 2011
PleI GAGTC 2 cut(s) 184, 1283
PmaCI CACGTG 2 cut(s) 533, 2411
PmlI CACGTG 2 cut(s) 533, 2411
PpsI GAGTC 2 cut(s) 184, 1283
Ppu21I YACGTR 3 cut(s) 533, 548, 2411
PpuMI RGGWCCY 2 cut(s) 677, 1684
PsiI TTATAA 2 cut(s) 608, 1667
Psp5II RGGWCCY 2 cut(s) 677, 1684
Psp6I CCWGG 4 cut(s) 1333, 1593, 1686, 1969
PspCI CACGTG 2 cut(s) 533, 2411
PspFI CCCAGC 2 cut(s) 572, 2348
PspGI CCWGG 4 cut(s) 1333, 1593, 1686, 1969
PspN4I GGNNCC 8 cut(s) 262, 347, 678, 774, 1465, 1685, 1763, 2166
PspOMI GGGCCC 1 cut(s) 345
PspPI GGNCC 6 cut(s) 158, 345, 346, 677, 1684, 1988
PspPPI RGGWCCY 2 cut(s) 677, 1684
PspXI VCTCGAGB 2 cut(s) 265, 2255
PstI CTGCAG 2 cut(s) 29, 2272
PstNI CAGNNNCTG 1 cut(s) 971
PsuI RGATCY 1 cut(s) 1026
PvuII CAGCTG 2 cut(s) 737, 1886
RsaI GTAC 5 cut(s) 726, 1161, 1240, 1351, 1998
RsaNI GTAC 5 cut(s) 725, 1160, 1239, 1350, 1997
SapI GCTCTTC 1 cut(s) 1074
SatI GCNGC 9 cut(s) 9, 28, 161, 738, 873, 876, 1065, 1887, 2010
Sau3AI GATC 6 cut(s) 221, 493, 1026, 1324, 1408, 1552
Sau96I GGNCC 6 cut(s) 158, 345, 346, 677, 1684, 1988
ScaI AGTACT 1 cut(s) 1240
SchI GAGTC 2 cut(s) 184, 1284
ScrFI CCNGG 6 cut(s) 157, 395, 1335, 1595, 1688, 1971
SduI GDGCHC 4 cut(s) 141, 349, 2370, 2382
SfaNI GCATC 7 cut(s) 63, 598, 887, 1613, 1825, 2077, 2361
SfcI CTRYAG 4 cut(s) 25, 1032, 1203, 2268
Sfr274I CTCGAG 2 cut(s) 265, 2255
SinI GGWCC 2 cut(s) 677, 1684
SlaI CTCGAG 2 cut(s) 265, 2255
SmlI CTYRAG 2 cut(s) 265, 2255
SmoI CTYRAG 2 cut(s) 265, 2255
SpeI ACTAGT 1 cut(s) 1261
SseBI AGGCCT 2 cut(s) 949, 1739
SsiI CCGC 9 cut(s) 30, 115, 125, 147, 161, 194, 1012, 1838, 2009
SspMI CTAG 4 cut(s) 87, 639, 1262, 1517
StuI AGGCCT 2 cut(s) 949, 1739
StyD4I CCNGG 6 cut(s) 155, 393, 1333, 1593, 1686, 1969
StyI CCWWGG 4 cut(s) 483, 830, 1542, 1781
TaaI ACNGT 6 cut(s) 253, 420, 619, 967, 973, 2028
TaiI ACGT 4 cut(s) 535, 550, 1804, 2413
TaqI TCGA 6 cut(s) 266, 715, 1069, 2256, 2386, 2419
TatI WGTACW 3 cut(s) 724, 1238, 1996
TauI GCSGC 2 cut(s) 163, 2012
TfiI GAWTC 5 cut(s) 33, 413, 1345, 1775, 2416
TscAI CASTG 2 cut(s) 139, 475
TseI GCWGC 7 cut(s) 8, 27, 737, 872, 875, 1064, 1886
TspDTI ATGAA 6 cut(s) 768, 1071, 1307, 1439, 1788, 1867
TspGWI ACGGA 2 cut(s) 234, 1734
TspRI CASTG 2 cut(s) 139, 475
Van91I CCANNNNNTGG 2 cut(s) 203, 1600
VpaK11BI GGWCC 2 cut(s) 677, 1684
XagI CCTNNNNNAGG 2 cut(s) 452, 1148
XapI RAATTY 4 cut(s) 403, 473, 1493, 2054
XbaI TCTAGA 1 cut(s) 1516
XhoI CTCGAG 2 cut(s) 265, 2255
XmiI GTMKAC 1 cut(s) 459
XmnI GAANNNNTTC 4 cut(s) 45, 1964, 2045, 2058
XspI CTAG 4 cut(s) 87, 639, 1262, 1517
ZrmI AGTACT 1 cut(s) 1240
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.