AarF domain-containing protein kinase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G24190 |
| fragaria_vesca | FvH4_4g00270 FvH4_4g00270 FvH4_4g00270 |
| malus_domestica | MD04G1002700.v1.1 |
| prunus_persica | Prupe.1G002700_v2.0.a1 Prupe.1G002700_v2.0.a1 Prupe.1G002700_v2.0.a1 Prupe.1G002700_v2.0.a1 Prupe.1G002700_v2.0.a1 Prupe.1G002700_v2.0.a1 |
| pyrus_communis | pycom04g00280 |
| rosa_chinensis | RchiOBHm_Chr4g0385111 |
| rosa_multiflora | Rmu_ssc0000158.1_g000037 |
| rosa_roxburghii | Rroxscaffold_5G00333020 |
| rosa_rugosa | Rorug03G0299100 |
| rosa_samantha | Rh4BG002200 Rh4CG003000 Rh4DG002500 |
| rosa_wichuraiana | Rw4G000660 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 608, 1667 |
| AbsI | CCTCGAGG | 1 cut(s) | 265 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 203, 1600 |
| AccBSI | CCGCTC | 1 cut(s) | 149 |
| AccI | GTMKAC | 1 cut(s) | 459 |
| AccII | CGCG | 1 cut(s) | 117 |
| AciI | CCGC | 9 cut(s) | 30, 115, 125, 147, 161, 194, 1012, 1838, 2009 |
| AclWI | GGATC | 3 cut(s) | 229, 488, 1319 |
| AcoI | YGGCCR | 2 cut(s) | 527, 1539 |
| AcsI | RAATTY | 4 cut(s) | 403, 473, 1493, 2054 |
| AcuI | CTGAAG | 3 cut(s) | 447, 1310, 2394 |
| AcvI | CACGTG | 2 cut(s) | 533, 2411 |
| AfaI | GTAC | 5 cut(s) | 726, 1161, 1240, 1351, 1998 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 121, 203, 293, 454, 1150, 1334, 1600, 1971, 2174 |
| AflIII | ACRYGT | 2 cut(s) | 545, 2410 |
| AhlI | ACTAGT | 1 cut(s) | 1261 |
| AjnI | CCWGG | 4 cut(s) | 1333, 1593, 1686, 1969 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 59, 91, 1236, 1268, 2319, 2351 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 404, 436 |
| Alw21I | GWGCWC | 2 cut(s) | 2370, 2382 |
| Alw26I | GTCTC | 3 cut(s) | 276, 395, 2319 |
| AlwI | GGATC | 3 cut(s) | 229, 488, 1319 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 971 |
| Ama87I | CYCGRG | 3 cut(s) | 265, 884, 2255 |
| AoxI | GGCC | 8 cut(s) | 158, 345, 527, 833, 947, 1539, 1737, 1988 |
| ApaI | GGGCCC | 1 cut(s) | 349 |
| ApeKI | GCWGC | 7 cut(s) | 8, 27, 737, 872, 875, 1064, 1886 |
| ApoI | RAATTY | 4 cut(s) | 403, 473, 1493, 2054 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 45, 1964, 2045, 2058 |
| AspLEI | GCGC | 1 cut(s) | 13 |
| AspS9I | GGNCC | 6 cut(s) | 158, 345, 346, 677, 1684, 1988 |
| AsuC2I | CCSGG | 2 cut(s) | 157, 395 |
| AsuHPI | GGTGA | 4 cut(s) | 723, 1115, 1433, 1931 |
| AvaI | CYCGRG | 3 cut(s) | 265, 884, 2255 |
| AvaII | GGWCC | 2 cut(s) | 677, 1684 |
| BaeGI | GKGCMC | 1 cut(s) | 349 |
| BalI | TGGCCA | 1 cut(s) | 1541 |
| BanII | GRGCYC | 2 cut(s) | 141, 349 |
| BauI | CACGAG | 2 cut(s) | 304, 593 |
| BbrPI | CACGTG | 2 cut(s) | 533, 2411 |
| BbsI | GAAGAC | 1 cut(s) | 372 |
| Bbv12I | GWGCWC | 2 cut(s) | 2370, 2382 |
| BbvI | GCAGC | 7 cut(s) | 20, 39, 724, 859, 862, 1076, 1873 |
| BccI | CCATC | 4 cut(s) | 346, 1203, 1211, 1352 |
| BceAI | ACGGC | 2 cut(s) | 542, 920 |
| BciT130I | CCWGG | 4 cut(s) | 1335, 1595, 1688, 1971 |
| BciVI | GTATCC | 1 cut(s) | 1638 |
| BclI | TGATCA | 2 cut(s) | 1408, 1552 |
| BcnI | CCSGG | 2 cut(s) | 157, 395 |
| BcoDI | GTCTC | 3 cut(s) | 276, 395, 2319 |
| BcuI | ACTAGT | 1 cut(s) | 1261 |
| BfaI | CTAG | 4 cut(s) | 87, 639, 1262, 1517 |
| BfmI | CTRYAG | 4 cut(s) | 25, 1032, 1203, 2268 |
| BfoI | RGCGCY | 1 cut(s) | 14 |
| BfuI | GTATCC | 1 cut(s) | 1638 |
| BglII | AGATCT | 1 cut(s) | 1026 |
| BisI | GCNGC | 9 cut(s) | 9, 28, 161, 738, 873, 876, 1065, 1887, 2010 |
| BlsI | GCNGC | 9 cut(s) | 10, 29, 162, 739, 874, 877, 1066, 1888, 2011 |
| BmcAI | AGTACT | 1 cut(s) | 1240 |
| Bme1390I | CCNGG | 6 cut(s) | 157, 395, 1335, 1595, 1688, 1971 |
| Bme18I | GGWCC | 2 cut(s) | 677, 1684 |
| BmeT110I | CYCGRG | 3 cut(s) | 265, 884, 2255 |
| BmgT120I | GGNCC | 6 cut(s) | 158, 345, 346, 677, 1684, 1988 |
| BmiI | GGNNCC | 8 cut(s) | 262, 347, 678, 774, 1465, 1685, 1763, 2166 |
| BmrFI | CCNGG | 6 cut(s) | 157, 395, 1335, 1595, 1688, 1971 |
| BmrI | ACTGGG | 1 cut(s) | 2144 |
| BmsI | GCATC | 7 cut(s) | 63, 598, 887, 1613, 1825, 2077, 2361 |
| BmuI | ACTGGG | 1 cut(s) | 2144 |
| BpiI | GAAGAC | 1 cut(s) | 372 |
| BpmI | CTGGAG | 2 cut(s) | 1338, 1845 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1787 |
| BpuMI | CCSGG | 2 cut(s) | 157, 395 |
| BsaAI | YACGTR | 3 cut(s) | 533, 548, 2411 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1329 |
| BsaI | GGTCTC | 2 cut(s) | 276, 395 |
| BsaJI | CCNNGG | 8 cut(s) | 394, 483, 830, 1334, 1542, 1781, 1969, 1970 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 912, 942, 1248, 1278, 1455, 1485 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 121, 203, 293, 454, 1150, 1334, 1600, 1971, 2174 |
| Bse1I | ACTGG | 5 cut(s) | 197, 1312, 1994, 2150, 2339 |
| Bse3DI | GCAATG | 1 cut(s) | 747 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1329 |
| BseBI | CCWGG | 4 cut(s) | 1335, 1595, 1688, 1971 |
| BseDI | CCNNGG | 8 cut(s) | 394, 483, 830, 1334, 1542, 1781, 1969, 1970 |
| BseGI | GGATG | 3 cut(s) | 1214, 1330, 2071 |
| BseJI | GATNNNNATC | 1 cut(s) | 1329 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 121, 203, 293, 454, 1150, 1334, 1600, 1971, 2174 |
| BseMI | GCAATG | 1 cut(s) | 747 |
| BseMII | CTCAG | 7 cut(s) | 126, 738, 840, 899, 1037, 2330, 2395 |
| BseNI | ACTGG | 5 cut(s) | 197, 1312, 1994, 2150, 2339 |
| BseRI | GAGGAG | 6 cut(s) | 172, 253, 827, 830, 1587, 2231 |
| BseSI | GKGCMC | 1 cut(s) | 349 |
| BseXI | GCAGC | 7 cut(s) | 20, 39, 724, 859, 862, 1076, 1873 |
| BseYI | CCCAGC | 2 cut(s) | 572, 2348 |
| BsgI | GTGCAG | 1 cut(s) | 962 |
| Bsh1236I | CGCG | 1 cut(s) | 117 |
| BshFI | GGCC | 8 cut(s) | 160, 347, 529, 835, 949, 1541, 1739, 1990 |
| BsiHKAI | GWGCWC | 2 cut(s) | 2370, 2382 |
| BsiHKCI | CYCGRG | 3 cut(s) | 265, 884, 2255 |
| BsiSI | CCGG | 2 cut(s) | 156, 394 |
| BslFI | GGGAC | 2 cut(s) | 411, 915 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 121, 203, 293, 454, 1150, 1334, 1600, 1971, 2174 |
| BsmAI | GTCTC | 3 cut(s) | 276, 395, 2319 |
| BsmFI | GGGAC | 2 cut(s) | 411, 915 |
| BsmI | GAATGC | 3 cut(s) | 711, 1938, 1966 |
| BsnI | GGCC | 8 cut(s) | 160, 347, 529, 835, 949, 1541, 1739, 1990 |
| Bso31I | GGTCTC | 2 cut(s) | 276, 395 |
| BsoBI | CYCGRG | 3 cut(s) | 265, 884, 2255 |
| Bsp120I | GGGCCC | 1 cut(s) | 345 |
| Bsp1286I | GDGCHC | 4 cut(s) | 141, 349, 2370, 2382 |
| Bsp143I | GATC | 6 cut(s) | 221, 493, 1026, 1324, 1408, 1552 |
| Bsp19I | CCATGG | 1 cut(s) | 830 |
| BspACI | CCGC | 9 cut(s) | 30, 115, 125, 147, 161, 194, 1012, 1838, 2009 |
| BspANI | GGCC | 8 cut(s) | 160, 347, 529, 835, 949, 1541, 1739, 1990 |
| BspCNI | CTCAG | 7 cut(s) | 127, 739, 841, 900, 1036, 2329, 2394 |
| BspFNI | CGCG | 1 cut(s) | 117 |
| BspHI | TCATGA | 1 cut(s) | 381 |
| BspLI | GGNNCC | 8 cut(s) | 262, 347, 678, 774, 1465, 1685, 1763, 2166 |
| BspMAI | CTGCAG | 2 cut(s) | 29, 2272 |
| BspPI | GGATC | 3 cut(s) | 229, 488, 1319 |
| BspQI | GCTCTTC | 1 cut(s) | 1074 |
| BspTNI | GGTCTC | 2 cut(s) | 276, 395 |
| BsrBI | CCGCTC | 1 cut(s) | 149 |
| BsrDI | GCAATG | 1 cut(s) | 747 |
| BsrI | ACTGG | 5 cut(s) | 197, 1312, 1994, 2150, 2339 |
| BssECI | CCNNGG | 8 cut(s) | 394, 483, 830, 1334, 1542, 1781, 1969, 1970 |
| BssMI | GATC | 6 cut(s) | 221, 493, 1026, 1324, 1408, 1552 |
| BssSI | CACGAG | 2 cut(s) | 304, 593 |
| BssT1I | CCWWGG | 4 cut(s) | 483, 830, 1542, 1781 |
| Bst2BI | CACGAG | 2 cut(s) | 304, 593 |
| Bst2UI | CCWGG | 4 cut(s) | 1335, 1595, 1688, 1971 |
| Bst4CI | ACNGT | 6 cut(s) | 253, 420, 619, 967, 973, 2028 |
| Bst6I | CTCTTC | 2 cut(s) | 1074, 2362 |
| BstBAI | YACGTR | 3 cut(s) | 533, 548, 2411 |
| BstC8I | GCNNGC | 4 cut(s) | 702, 1368, 1863, 2190 |
| BstDEI | CTNAG | 8 cut(s) | 135, 747, 849, 908, 1023, 1787, 2316, 2381 |
| BstDSI | CCRYGG | 1 cut(s) | 830 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 452, 1148 |
| BstF5I | GGATG | 3 cut(s) | 1214, 1330, 2071 |
| BstFNI | CGCG | 1 cut(s) | 117 |
| BstH2I | RGCGCY | 1 cut(s) | 14 |
| BstHHI | GCGC | 1 cut(s) | 13 |
| BstKTI | GATC | 6 cut(s) | 224, 496, 1029, 1327, 1411, 1555 |
| BstMAI | GTCTC | 3 cut(s) | 276, 395, 2319 |
| BstMBI | GATC | 6 cut(s) | 221, 493, 1026, 1324, 1408, 1552 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 36, 193, 757, 826, 2015, 2185 |
| BstNI | CCWGG | 4 cut(s) | 1335, 1595, 1688, 1971 |
| BstSCI | CCNGG | 6 cut(s) | 155, 393, 1333, 1593, 1686, 1969 |
| BstSFI | CTRYAG | 4 cut(s) | 25, 1032, 1203, 2268 |
| BstSLI | GKGCMC | 1 cut(s) | 349 |
| BstUI | CGCG | 1 cut(s) | 117 |
| BstV1I | GCAGC | 7 cut(s) | 20, 39, 724, 859, 862, 1076, 1873 |
| BstV2I | GAAGAC | 1 cut(s) | 372 |
| BstX2I | RGATCY | 1 cut(s) | 1026 |
| BstYI | RGATCY | 1 cut(s) | 1026 |
| BsuI | GTATCC | 1 cut(s) | 1638 |
| BsuRI | GGCC | 8 cut(s) | 160, 347, 529, 835, 949, 1541, 1739, 1990 |
| BtgI | CCRYGG | 1 cut(s) | 830 |
| BtsCI | GGATG | 3 cut(s) | 1214, 1330, 2071 |
| BtsI | GCAGTG | 1 cut(s) | 475 |
| BtsIMutI | CAGTG | 2 cut(s) | 132, 475 |
| Cac8I | GCNNGC | 4 cut(s) | 702, 1368, 1863, 2190 |
| CaiI | CAGNNNCTG | 1 cut(s) | 971 |
| CciI | TCATGA | 1 cut(s) | 381 |
| CfoI | GCGC | 1 cut(s) | 13 |
| Cfr13I | GGNCC | 6 cut(s) | 158, 345, 346, 677, 1684, 1988 |
| CseI | GACGC | 1 cut(s) | 14 |
| Csp6I | GTAC | 5 cut(s) | 725, 1160, 1239, 1350, 1997 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 292, 327 |
| CviAII | CATG | 5 cut(s) | 382, 831, 1319, 1858, 2161 |
| CviQI | GTAC | 5 cut(s) | 725, 1160, 1239, 1350, 1997 |
| DdeI | CTNAG | 8 cut(s) | 135, 747, 849, 908, 1023, 1787, 2316, 2381 |
| DpnI | GATC | 6 cut(s) | 223, 495, 1028, 1326, 1410, 1554 |
| DpnII | GATC | 6 cut(s) | 221, 493, 1026, 1324, 1408, 1552 |
| DraI | TTTAAA | 1 cut(s) | 408 |
| EaeI | YGGCCR | 2 cut(s) | 527, 1539 |
| Eam1104I | CTCTTC | 2 cut(s) | 1074, 2362 |
| EarI | CTCTTC | 2 cut(s) | 1074, 2362 |
| EciI | GGCGGA | 1 cut(s) | 183 |
| Eco130I | CCWWGG | 4 cut(s) | 483, 830, 1542, 1781 |
| Eco147I | AGGCCT | 2 cut(s) | 949, 1739 |
| Eco24I | GRGCYC | 2 cut(s) | 141, 349 |
| Eco31I | GGTCTC | 2 cut(s) | 276, 395 |
| Eco47I | GGWCC | 2 cut(s) | 677, 1684 |
| Eco57I | CTGAAG | 3 cut(s) | 447, 1310, 2394 |
| Eco72I | CACGTG | 2 cut(s) | 533, 2411 |
| Eco88I | CYCGRG | 3 cut(s) | 265, 884, 2255 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 452, 1148 |
| EcoO109I | RGGNCCY | 3 cut(s) | 345, 677, 1684 |
| EcoRII | CCWGG | 4 cut(s) | 1333, 1593, 1686, 1969 |
| EcoT14I | CCWWGG | 4 cut(s) | 483, 830, 1542, 1781 |
| EcoT38I | GRGCYC | 2 cut(s) | 141, 349 |
| ErhI | CCWWGG | 4 cut(s) | 483, 830, 1542, 1781 |
| FaeI | CATG | 5 cut(s) | 385, 834, 1322, 1861, 2164 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 1780, 1812, 1996, 2028, 2319, 2351 |
| FaqI | GGGAC | 2 cut(s) | 411, 915 |
| FatI | CATG | 5 cut(s) | 381, 830, 1318, 1857, 2160 |
| FauI | CCCGC | 1 cut(s) | 154 |
| FauNDI | CATATG | 1 cut(s) | 1280 |
| FbaI | TGATCA | 2 cut(s) | 1408, 1552 |
| FblI | GTMKAC | 1 cut(s) | 459 |
| Fnu4HI | GCNGC | 9 cut(s) | 9, 28, 161, 738, 873, 876, 1065, 1887, 2010 |
| FokI | GGATG | 3 cut(s) | 1221, 1317, 2078 |
| FriOI | GRGCYC | 2 cut(s) | 141, 349 |
| Fsp4HI | GCNGC | 9 cut(s) | 9, 28, 161, 738, 873, 876, 1065, 1887, 2010 |
| FspBI | CTAG | 4 cut(s) | 87, 639, 1262, 1517 |
| GlaI | GCGC | 1 cut(s) | 12 |
| GluI | GCNGC | 9 cut(s) | 9, 28, 161, 738, 873, 876, 1065, 1887, 2010 |
| GsaI | CCCAGC | 2 cut(s) | 576, 2352 |
| GsuI | CTGGAG | 2 cut(s) | 1338, 1845 |
| HaeII | RGCGCY | 1 cut(s) | 14 |
| HaeIII | GGCC | 8 cut(s) | 160, 347, 529, 835, 949, 1541, 1739, 1990 |
| HapII | CCGG | 2 cut(s) | 156, 394 |
| HgaI | GACGC | 1 cut(s) | 14 |
| HhaI | GCGC | 1 cut(s) | 13 |
| Hin1II | CATG | 5 cut(s) | 385, 834, 1322, 1861, 2164 |
| Hin6I | GCGC | 1 cut(s) | 11 |
| HinP1I | GCGC | 1 cut(s) | 11 |
| HindIII | AAGCTT | 2 cut(s) | 758, 1364 |
| HinfI | GANTC | 7 cut(s) | 33, 190, 413, 1275, 1345, 1775, 2416 |
| HpaII | CCGG | 2 cut(s) | 156, 394 |
| HphI | GGTGA | 4 cut(s) | 723, 1115, 1433, 1931 |
| Hpy166II | GTNNAC | 2 cut(s) | 460, 1732 |
| Hpy188I | TCNGA | 9 cut(s) | 276, 807, 850, 1026, 1413, 1504, 1609, 2032, 2051 |
| Hpy8I | GTNNAC | 2 cut(s) | 460, 1732 |
| Hpy99I | CGWCG | 1 cut(s) | 54 |
| HpyAV | CCTTC | 7 cut(s) | 56, 85, 786, 1154, 1559, 1685, 1975 |
| HpyCH4III | ACNGT | 6 cut(s) | 253, 420, 619, 967, 973, 2028 |
| HpyCH4IV | ACGT | 4 cut(s) | 532, 547, 1801, 2410 |
| HpyCH4V | TGCA | 9 cut(s) | 27, 683, 740, 878, 943, 1861, 1945, 2090, 2270 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 36, 193, 757, 826, 2015, 2185 |
| HpyF3I | CTNAG | 8 cut(s) | 135, 747, 849, 908, 1023, 1787, 2316, 2381 |
| HpySE526I | ACGT | 4 cut(s) | 532, 547, 1801, 2410 |
| Hsp92II | CATG | 5 cut(s) | 385, 834, 1322, 1861, 2164 |
| HspAI | GCGC | 1 cut(s) | 11 |
| Ksp22I | TGATCA | 2 cut(s) | 1408, 1552 |
| Kzo9I | GATC | 6 cut(s) | 221, 493, 1026, 1324, 1408, 1552 |
| LguI | GCTCTTC | 1 cut(s) | 1074 |
| LmnI | GCTCC | 7 cut(s) | 154, 266, 817, 1463, 1574, 1767, 2373 |
| Lsp1109I | GCAGC | 7 cut(s) | 20, 39, 724, 859, 862, 1076, 1873 |
| LweI | GCATC | 7 cut(s) | 63, 598, 887, 1613, 1825, 2077, 2361 |
| MaeI | CTAG | 4 cut(s) | 87, 639, 1262, 1517 |
| MaeII | ACGT | 4 cut(s) | 532, 547, 1801, 2410 |
| MaeIII | GTNAC | 5 cut(s) | 664, 967, 1390, 1802, 2092 |
| MalI | GATC | 6 cut(s) | 223, 495, 1028, 1326, 1410, 1554 |
| MbiI | CCGCTC | 1 cut(s) | 149 |
| MboI | GATC | 6 cut(s) | 221, 493, 1026, 1324, 1408, 1552 |
| MfeI | CAATTG | 4 cut(s) | 867, 1434, 1677, 2105 |
| MflI | RGATCY | 1 cut(s) | 1026 |
| MhlI | GDGCHC | 4 cut(s) | 141, 349, 2370, 2382 |
| MlsI | TGGCCA | 1 cut(s) | 1541 |
| MluNI | TGGCCA | 1 cut(s) | 1541 |
| MlyI | GAGTC | 2 cut(s) | 184, 1284 |
| MmeI | TCCRAC | 5 cut(s) | 105, 299, 1024, 1234, 1252 |
| Mox20I | TGGCCA | 1 cut(s) | 1541 |
| MroXI | GAANNNNTTC | 4 cut(s) | 45, 1964, 2045, 2058 |
| MscI | TGGCCA | 1 cut(s) | 1541 |
| Msp20I | TGGCCA | 1 cut(s) | 1541 |
| MspA1I | CMGCKG | 3 cut(s) | 30, 737, 1886 |
| MspI | CCGG | 2 cut(s) | 156, 394 |
| MspR9I | CCNGG | 6 cut(s) | 157, 395, 1335, 1595, 1688, 1971 |
| MunI | CAATTG | 4 cut(s) | 867, 1434, 1677, 2105 |
| Mva1269I | GAATGC | 3 cut(s) | 711, 1938, 1966 |
| MvaI | CCWGG | 4 cut(s) | 1335, 1595, 1688, 1971 |
| MvnI | CGCG | 1 cut(s) | 117 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 36, 193, 757, 826, 2015, 2185 |
| NciI | CCSGG | 2 cut(s) | 157, 395 |
| NcoI | CCATGG | 1 cut(s) | 830 |
| NdeI | CATATG | 1 cut(s) | 1280 |
| NdeII | GATC | 6 cut(s) | 221, 493, 1026, 1324, 1408, 1552 |
| NlaIII | CATG | 5 cut(s) | 385, 834, 1322, 1861, 2164 |
| NlaIV | GGNNCC | 8 cut(s) | 262, 347, 678, 774, 1465, 1685, 1763, 2166 |
| PaeR7I | CTCGAG | 2 cut(s) | 265, 2255 |
| PagI | TCATGA | 1 cut(s) | 381 |
| PasI | CCCWGGG | 1 cut(s) | 1970 |
| PceI | AGGCCT | 2 cut(s) | 949, 1739 |
| PciSI | GCTCTTC | 1 cut(s) | 1074 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 272, 2416 |
| PctI | GAATGC | 3 cut(s) | 711, 1938, 1966 |
| PdmI | GAANNNNTTC | 4 cut(s) | 45, 1964, 2045, 2058 |
| PfeI | GAWTC | 5 cut(s) | 33, 413, 1345, 1775, 2416 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 203, 1600 |
| PfoI | TCCNGGA | 2 cut(s) | 1593, 1686 |
| PkrI | GCNGC | 9 cut(s) | 10, 29, 162, 739, 874, 877, 1066, 1888, 2011 |
| PleI | GAGTC | 2 cut(s) | 184, 1283 |
| PmaCI | CACGTG | 2 cut(s) | 533, 2411 |
| PmlI | CACGTG | 2 cut(s) | 533, 2411 |
| PpsI | GAGTC | 2 cut(s) | 184, 1283 |
| Ppu21I | YACGTR | 3 cut(s) | 533, 548, 2411 |
| PpuMI | RGGWCCY | 2 cut(s) | 677, 1684 |
| PsiI | TTATAA | 2 cut(s) | 608, 1667 |
| Psp5II | RGGWCCY | 2 cut(s) | 677, 1684 |
| Psp6I | CCWGG | 4 cut(s) | 1333, 1593, 1686, 1969 |
| PspCI | CACGTG | 2 cut(s) | 533, 2411 |
| PspFI | CCCAGC | 2 cut(s) | 572, 2348 |
| PspGI | CCWGG | 4 cut(s) | 1333, 1593, 1686, 1969 |
| PspN4I | GGNNCC | 8 cut(s) | 262, 347, 678, 774, 1465, 1685, 1763, 2166 |
| PspOMI | GGGCCC | 1 cut(s) | 345 |
| PspPI | GGNCC | 6 cut(s) | 158, 345, 346, 677, 1684, 1988 |
| PspPPI | RGGWCCY | 2 cut(s) | 677, 1684 |
| PspXI | VCTCGAGB | 2 cut(s) | 265, 2255 |
| PstI | CTGCAG | 2 cut(s) | 29, 2272 |
| PstNI | CAGNNNCTG | 1 cut(s) | 971 |
| PsuI | RGATCY | 1 cut(s) | 1026 |
| PvuII | CAGCTG | 2 cut(s) | 737, 1886 |
| RsaI | GTAC | 5 cut(s) | 726, 1161, 1240, 1351, 1998 |
| RsaNI | GTAC | 5 cut(s) | 725, 1160, 1239, 1350, 1997 |
| SapI | GCTCTTC | 1 cut(s) | 1074 |
| SatI | GCNGC | 9 cut(s) | 9, 28, 161, 738, 873, 876, 1065, 1887, 2010 |
| Sau3AI | GATC | 6 cut(s) | 221, 493, 1026, 1324, 1408, 1552 |
| Sau96I | GGNCC | 6 cut(s) | 158, 345, 346, 677, 1684, 1988 |
| ScaI | AGTACT | 1 cut(s) | 1240 |
| SchI | GAGTC | 2 cut(s) | 184, 1284 |
| ScrFI | CCNGG | 6 cut(s) | 157, 395, 1335, 1595, 1688, 1971 |
| SduI | GDGCHC | 4 cut(s) | 141, 349, 2370, 2382 |
| SfaNI | GCATC | 7 cut(s) | 63, 598, 887, 1613, 1825, 2077, 2361 |
| SfcI | CTRYAG | 4 cut(s) | 25, 1032, 1203, 2268 |
| Sfr274I | CTCGAG | 2 cut(s) | 265, 2255 |
| SinI | GGWCC | 2 cut(s) | 677, 1684 |
| SlaI | CTCGAG | 2 cut(s) | 265, 2255 |
| SmlI | CTYRAG | 2 cut(s) | 265, 2255 |
| SmoI | CTYRAG | 2 cut(s) | 265, 2255 |
| SpeI | ACTAGT | 1 cut(s) | 1261 |
| SseBI | AGGCCT | 2 cut(s) | 949, 1739 |
| SsiI | CCGC | 9 cut(s) | 30, 115, 125, 147, 161, 194, 1012, 1838, 2009 |
| SspMI | CTAG | 4 cut(s) | 87, 639, 1262, 1517 |
| StuI | AGGCCT | 2 cut(s) | 949, 1739 |
| StyD4I | CCNGG | 6 cut(s) | 155, 393, 1333, 1593, 1686, 1969 |
| StyI | CCWWGG | 4 cut(s) | 483, 830, 1542, 1781 |
| TaaI | ACNGT | 6 cut(s) | 253, 420, 619, 967, 973, 2028 |
| TaiI | ACGT | 4 cut(s) | 535, 550, 1804, 2413 |
| TaqI | TCGA | 6 cut(s) | 266, 715, 1069, 2256, 2386, 2419 |
| TatI | WGTACW | 3 cut(s) | 724, 1238, 1996 |
| TauI | GCSGC | 2 cut(s) | 163, 2012 |
| TfiI | GAWTC | 5 cut(s) | 33, 413, 1345, 1775, 2416 |
| TscAI | CASTG | 2 cut(s) | 139, 475 |
| TseI | GCWGC | 7 cut(s) | 8, 27, 737, 872, 875, 1064, 1886 |
| TspDTI | ATGAA | 6 cut(s) | 768, 1071, 1307, 1439, 1788, 1867 |
| TspGWI | ACGGA | 2 cut(s) | 234, 1734 |
| TspRI | CASTG | 2 cut(s) | 139, 475 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 203, 1600 |
| VpaK11BI | GGWCC | 2 cut(s) | 677, 1684 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 452, 1148 |
| XapI | RAATTY | 4 cut(s) | 403, 473, 1493, 2054 |
| XbaI | TCTAGA | 1 cut(s) | 1516 |
| XhoI | CTCGAG | 2 cut(s) | 265, 2255 |
| XmiI | GTMKAC | 1 cut(s) | 459 |
| XmnI | GAANNNNTTC | 4 cut(s) | 45, 1964, 2045, 2058 |
| XspI | CTAG | 4 cut(s) | 87, 639, 1262, 1517 |
| ZrmI | AGTACT | 1 cut(s) | 1240 |