Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000158.1

Orthogroup ID

OG0011327

Physical Location & Seq

Genomic Coordinates Forward (+)

170685 .. 178391

Gene Structure 7707 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000158.1_g000037.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2385 bp

atggaggcagcgcctcagctcgtctccactggaatcgaatcccttcgccggagctccaagcattcattcccgaccacaacctccagtagagttcgagttcgcgttccgaaccgatttaaccgggttcttgcggttgccaccgaccccaaacccaccaagtccggctcatcaccatcaaagccacccaaatctccatcgccaaactctgtcaatggctcctcctcgaggtccccgcccatcaatggagtttccacgagaattggtgatgtttcaaaggaaatcaaaagggtgcgagcacagatggaagaaaacgaagacttggcaatactcatgaaaggtcttcgcggacaaaatttgaaggattcacagtttgctgaggatgacgttcagcttcgtcttgttgaggtagatgaaagcagtgaatttttgcctgtggtatatgatcctgctagcatctctgcttattggggaaaacggcctcgtgctgttgtgacacgtgtaattcaattactctctgtaactgggggtttcctttcacgtcttgcaggggattttataaacaagaaaatcaaagagaatgaagttgctagggccattgaaataagggaaattgtgacctctttgggtcccgcatatatcaaacttgggcaagcattgagcattcgaccagatatactgtcacccgctgcaatgactgagctgcaaaagctttgtgataaggttccttcatttccggatgatatagctatggctctcattgaggaggagcttggtcagccatggcaaaacatgtactctgagctctcttcctctccaattgctgctgcatctcttgggcaagtatataagggccggctaaaagaaaatggagatctcgtggctgttaaagtgcagagaccttttgttcttgaaacagtaactgttgatttgtttatcatacggaacttgggtttggttctccggaggtttcctcagatctctgtagatgtggttggattagttgatgaatgggcagctcgtttctttgaagagttggattatattaacgagggtgagaatgggctactctttgctgaaatgatgagaaaagatcttccacaggtggttgtaccaaaaacctacccaaaatatacatcaagaaaggttcttactacatcatggttagaaggagagaagctatcacaaagtactgaaagtgatgttggagaactggtcaatgttggagtcatatgctacctgaagcagttgcttgacactgggttatttcatgccgatcctcatcctgggaatttgattcgcactccagatggcaagcttgccatacttgattttggtctggtcaccaagttaactgatgatcaaaagtatggaatgattgaggcaattgctcaccttattcatcgtgattatggagccatagtcaaagactttgtcaagctcggttttattgatgagggggttaatctagaacctattttgcctgttctggccaaggtttttgatcaggctcttgaaggtggaggagcaaaaaatatcaacttccaagacttggcagcagatttggcacaaatcacatttgactatccatttaagataccgccttatttcgctcttataattagagcaattggggtcctggaaggcatagctttagtgggaaatcctgattttgctattgtggatgaggcctatccatatattgcccagaggctactgacagatgaatccccacggttaaggaatgctttacgttacacaatttatgggaaatctggagtttttgatgcggaaagatttattgatgtcatgcaagcctttgagagtttcataactgctgctaaaagtggaggtggagaggaaatgaatggcaatatggctgaacttggacttttgcaaagtcgaacagagtatacccttcctggatttgcgtcgaatgtgcaaccagttcaaacaagggcagctttagcatttgtactgtctgataaaggaaactttttcagagaatttcttctggatgagattgtaaaaggcattgatgcagttacaagagaacaattggttcgtgcaatggcacttcttggattcgggaatgctcttccagttttcagcatggctcctagttttgggcctttcaagcctgcaggacttctaccaacaataactgaggaggatagagttatattgaacaatgttcaaagagtagtcgagttcctggctgcagggagttcgatatcaagaacatccaatcaggaattaaatgtgtctcaggttatccaagagtttcttcctgttatgccgagtatctcttccaaagtgctccctgaagtgctgagccgattatcttcacgggtaatagcacgtgtgattagagatacaattttgtaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC1 APH

Protein Analysis

794

Amino Acids

87.4

Weight (kDa)

5.54

Isoelectric Point (pI)

40.81

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011327)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G24190
fragaria_vesca	FvH4_4g00270 FvH4_4g00270 FvH4_4g00270
malus_domestica	MD04G1002700.v1.1
prunus_persica	Prupe.1G002700_v2.0.a1 Prupe.1G002700_v2.0.a1 Prupe.1G002700_v2.0.a1 Prupe.1G002700_v2.0.a1 Prupe.1G002700_v2.0.a1 Prupe.1G002700_v2.0.a1
pyrus_communis	pycom04g00280
rosa_chinensis	RchiOBHm_Chr4g0385111
rosa_multiflora	Rmu_ssc0000158.1_g000037
rosa_roxburghii	Rroxscaffold_5G00333020
rosa_rugosa	Rorug03G0299100
rosa_samantha	Rh4BG002200 Rh4CG003000 Rh4DG002500
rosa_wichuraiana	Rw4G000660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	557, 1616
AbsI	CCTCGAGG	1 cut(s)	223
AccB7I	CCANNNNNTGG	1 cut(s)	1549
AccI	GTMKAC	1 cut(s)	1910
AccII	CGCG	2 cut(s)	102, 345
AccIII	TCCGGA	2 cut(s)	733, 960
AciI	CCGC	7 cut(s)	131, 233, 345, 630, 684, 1598, 1787
AclWI	GGATC	2 cut(s)	437, 1268
AcoI	YGGCCR	1 cut(s)	1488
AcsI	RAATTY	4 cut(s)	352, 422, 1288, 2003
AcuI	CTGAAG	2 cut(s)	1259, 2343
AcvI	CACGTG	2 cut(s)	497, 2360
AfaI	GTAC	4 cut(s)	794, 1110, 1189, 1974
AfiI	CCNNNNNNNGG	6 cut(s)	48, 225, 242, 1283, 1549, 2123
AflIII	ACRYGT	4 cut(s)	494, 496, 789, 2359
AjiI	CACGTC	1 cut(s)	539
AjnI	CCWGG	4 cut(s)	1282, 1635, 1918, 2211
AjuI	GAANNNNNNNTTGG	8 cut(s)	50, 82, 935, 967, 1185, 1217, 2268, 2300
Alw21I	GWGCWC	4 cut(s)	56, 298, 804, 2319
Alw26I	GTCTC	3 cut(s)	28, 889, 2268
AlwI	GGATC	2 cut(s)	437, 1268
AlwNI	CAGNNNCTG	1 cut(s)	920
Ama87I	CYCGRG	1 cut(s)	223
Aor13HI	TCCGGA	2 cut(s)	733, 960
AoxI	GGCC	6 cut(s)	476, 591, 850, 1488, 1686, 2126
ApoI	RAATTY	4 cut(s)	352, 422, 1288, 2003
ArsI	GACNNNNNNTTYG	2 cut(s)	1416, 1448
Asp700I	GAANNNNTTC	2 cut(s)	42, 2007
AspLEI	GCGC	1 cut(s)	13
AspS9I	GGNCC	6 cut(s)	228, 591, 626, 850, 1633, 2126
AsuC2I	CCSGG	1 cut(s)	122
AsuHPI	GGTGA	6 cut(s)	162, 275, 672, 1064, 1333, 1382
AsuNHI	GCTAGC	1 cut(s)	449
AvaI	CYCGRG	1 cut(s)	223
AvaII	GGWCC	3 cut(s)	228, 626, 1633
BalI	TGGCCA	1 cut(s)	1490
BanII	GRGCYC	2 cut(s)	56, 804
BauI	CACGAG	3 cut(s)	253, 480, 875
BbrPI	CACGTG	2 cut(s)	497, 2360
BbsI	GAAGAC	2 cut(s)	321, 332
Bbv12I	GWGCWC	4 cut(s)	56, 298, 804, 2319
BbvCI	CCTCAGC	2 cut(s)	15, 375
BccI	CCATC	5 cut(s)	181, 202, 245, 295, 1301
BceAI	ACGGC	1 cut(s)	491
BcgI	CGANNNNNNTGC	2 cut(s)	2208, 2242
BciT130I	CCWGG	4 cut(s)	1284, 1637, 1920, 2213
BclI	TGATCA	2 cut(s)	1357, 1501
BcnI	CCSGG	1 cut(s)	122
BcoDI	GTCTC	3 cut(s)	28, 889, 2268
BfaI	CTAG	4 cut(s)	450, 588, 1466, 2118
BfmI	CTRYAG	3 cut(s)	981, 2139, 2217
BfoI	RGCGCY	1 cut(s)	14
BglII	AGATCT	3 cut(s)	871, 975, 1090
BlpI	GCTNAGC	1 cut(s)	2330
BmcAI	AGTACT	1 cut(s)	1189
Bme1390I	CCNGG	5 cut(s)	122, 1284, 1637, 1920, 2213
Bme18I	GGWCC	3 cut(s)	228, 626, 1633
BmeT110I	CYCGRG	1 cut(s)	223
BmgBI	CACGTC	1 cut(s)	539
BmgT120I	GGNCC	6 cut(s)	228, 591, 626, 850, 1633, 2126
BmiI	GGNNCC	8 cut(s)	217, 230, 627, 628, 723, 1414, 1634, 2115
BmrFI	CCNGG	5 cut(s)	122, 1284, 1637, 1920, 2213
BmrI	ACTGGG	2 cut(s)	531, 1266
BmsI	GCATC	4 cut(s)	462, 836, 1774, 2026
BmtI	GCTAGC	1 cut(s)	453
BmuI	ACTGGG	2 cut(s)	531, 1266
BpiI	GAAGAC	2 cut(s)	321, 332
BplI	GAGNNNNNCTC	2 cut(s)	955, 987
BpmI	CTGGAG	3 cut(s)	67, 1287, 1794
Bpu10I	CCTNAGC	2 cut(s)	15, 375
Bpu1102I	GCTNAGC	1 cut(s)	2330
BpuMI	CCSGG	1 cut(s)	122
BsaAI	YACGTR	2 cut(s)	497, 2360
BsaBI	GATNNNNATC	1 cut(s)	1278
BsaI	GGTCTC	1 cut(s)	889
BsaJI	CCNNGG	4 cut(s)	779, 1283, 1491, 1730
BsaWI	WCCGGW	2 cut(s)	733, 960
BsaXI	ACNNNNNCTCC	6 cut(s)	861, 891, 1197, 1227, 1404, 1434
Bsc4I	CCNNNNNNNGG	6 cut(s)	48, 225, 242, 1283, 1549, 2123
Bse118I	RCCGGY	1 cut(s)	852
Bse1I	ACTGG	7 cut(s)	34, 84, 526, 1215, 1261, 1943, 2099
Bse3DI	GCAATG	2 cut(s)	696, 2073
Bse8I	GATNNNNATC	1 cut(s)	1278
BseAI	TCCGGA	2 cut(s)	733, 960
BseBI	CCWGG	4 cut(s)	1284, 1637, 1920, 2213
BseDI	CCNNGG	4 cut(s)	779, 1283, 1491, 1730
BseGI	GGATG	6 cut(s)	385, 742, 1279, 1687, 2020, 2240
BseJI	GATNNNNATC	1 cut(s)	1278
BseLI	CCNNNNNNNGG	6 cut(s)	48, 225, 242, 1283, 1549, 2123
BseMI	GCAATG	2 cut(s)	696, 2073
BseMII	CTCAG	8 cut(s)	29, 366, 687, 789, 986, 2154, 2279, 2321
BseNI	ACTGG	7 cut(s)	34, 84, 526, 1215, 1261, 1943, 2099
BseRI	GAGGAG	6 cut(s)	208, 211, 776, 779, 1536, 2180
BsgI	GTGCAG	1 cut(s)	911
Bsh1236I	CGCG	2 cut(s)	102, 345
BshFI	GGCC	6 cut(s)	478, 593, 852, 1490, 1688, 2128
BsiHKAI	GWGCWC	4 cut(s)	56, 298, 804, 2319
BsiHKCI	CYCGRG	1 cut(s)	223
BsiSI	CCGG	6 cut(s)	49, 121, 162, 734, 853, 961
BslFI	GGGAC	2 cut(s)	214, 612
BslI	CCNNNNNNNGG	6 cut(s)	48, 225, 242, 1283, 1549, 2123
BsmAI	GTCTC	3 cut(s)	28, 889, 2268
BsmBI	CGTCTC	1 cut(s)	28
BsmFI	GGGAC	2 cut(s)	214, 612
BsmI	GAATGC	4 cut(s)	61, 660, 1747, 2095
BsnI	GGCC	6 cut(s)	478, 593, 852, 1490, 1688, 2128
Bso31I	GGTCTC	1 cut(s)	889
BsoBI	CYCGRG	1 cut(s)	223
Bsp1286I	GDGCHC	4 cut(s)	56, 298, 804, 2319
Bsp13I	TCCGGA	2 cut(s)	733, 960
Bsp143I	GATC	7 cut(s)	442, 871, 975, 1090, 1273, 1357, 1501
Bsp1720I	GCTNAGC	1 cut(s)	2330
Bsp19I	CCATGG	1 cut(s)	779
BspACI	CCGC	7 cut(s)	131, 233, 345, 630, 684, 1598, 1787
BspANI	GGCC	6 cut(s)	478, 593, 852, 1490, 1688, 2128
BspCNI	CTCAG	8 cut(s)	28, 367, 688, 790, 985, 2155, 2278, 2322
BspEI	TCCGGA	2 cut(s)	733, 960
BspFNI	CGCG	2 cut(s)	102, 345
BspHI	TCATGA	1 cut(s)	330
BspLI	GGNNCC	8 cut(s)	217, 230, 627, 628, 723, 1414, 1634, 2115
BspMAI	CTGCAG	2 cut(s)	2143, 2221
BspOI	GCTAGC	1 cut(s)	453
BspPI	GGATC	2 cut(s)	437, 1268
BspQI	GCTCTTC	1 cut(s)	2100
BspTNI	GGTCTC	1 cut(s)	889
BsrDI	GCAATG	2 cut(s)	696, 2073
BsrFI	RCCGGY	1 cut(s)	852
BsrI	ACTGG	7 cut(s)	34, 84, 526, 1215, 1261, 1943, 2099
BssAI	RCCGGY	1 cut(s)	852
BssECI	CCNNGG	4 cut(s)	779, 1283, 1491, 1730
BssMI	GATC	7 cut(s)	442, 871, 975, 1090, 1273, 1357, 1501
BssNAI	GTATAC	1 cut(s)	1911
BssSI	CACGAG	3 cut(s)	253, 480, 875
BssT1I	CCWWGG	2 cut(s)	779, 1491
Bst1107I	GTATAC	1 cut(s)	1911
Bst2BI	CACGAG	3 cut(s)	253, 480, 875
Bst2UI	CCWGG	4 cut(s)	1284, 1637, 1920, 2213
Bst4CI	ACNGT	6 cut(s)	369, 678, 916, 922, 1734, 1977
Bst6I	CTCTTC	4 cut(s)	811, 1023, 2100, 2311
BstBAI	YACGTR	2 cut(s)	497, 2360
BstC8I	GCNNGC	8 cut(s)	294, 451, 651, 854, 1313, 1317, 1812, 2139
BstDEI	CTNAG	8 cut(s)	15, 375, 696, 798, 972, 2163, 2265, 2330
BstDSI	CCRYGG	2 cut(s)	779, 1730
BstEII	GGTNACC	1 cut(s)	1339
BstENI	CCTNNNNNAGG	1 cut(s)	223
BstF5I	GGATG	6 cut(s)	385, 742, 1279, 1687, 2020, 2240
BstFNI	CGCG	2 cut(s)	102, 345
BstH2I	RGCGCY	1 cut(s)	14
BstHHI	GCGC	1 cut(s)	13
BstKTI	GATC	7 cut(s)	445, 874, 978, 1093, 1276, 1360, 1504
BstMAI	GTCTC	3 cut(s)	28, 889, 2268
BstMBI	GATC	7 cut(s)	442, 871, 975, 1090, 1273, 1357, 1501
BstMWI	GCNNNNNNNGC	5 cut(s)	706, 775, 1562, 1964, 2134
BstNI	CCWGG	4 cut(s)	1284, 1637, 1920, 2213
BstNSI	RCATGY	1 cut(s)	793
BstPI	GGTNACC	1 cut(s)	1339
BstSCI	CCNGG	5 cut(s)	120, 1282, 1635, 1918, 2211
BstSFI	CTRYAG	3 cut(s)	981, 2139, 2217
BstUI	CGCG	2 cut(s)	102, 345
BstV2I	GAAGAC	2 cut(s)	321, 332
BstX2I	RGATCY	3 cut(s)	871, 975, 1090
BstYI	RGATCY	3 cut(s)	871, 975, 1090
BstZ17I	GTATAC	1 cut(s)	1911
BsuRI	GGCC	6 cut(s)	478, 593, 852, 1490, 1688, 2128
BtgI	CCRYGG	2 cut(s)	779, 1730
BtgZI	GCGATG	1 cut(s)	180
BtrI	CACGTC	1 cut(s)	539
BtsCI	GGATG	6 cut(s)	385, 742, 1279, 1687, 2020, 2240
BtsI	GCAGTG	1 cut(s)	424
BtsIMutI	CAGTG	3 cut(s)	27, 424, 1254
Cac8I	GCNNGC	8 cut(s)	294, 451, 651, 854, 1313, 1317, 1812, 2139
CaiI	CAGNNNCTG	1 cut(s)	920
CciI	TCATGA	1 cut(s)	330
CfoI	GCGC	1 cut(s)	13
Cfr10I	RCCGGY	1 cut(s)	852
Cfr13I	GGNCC	6 cut(s)	228, 591, 626, 850, 1633, 2126
CseI	GACGC	1 cut(s)	1917
Csp6I	GTAC	4 cut(s)	793, 1109, 1188, 1973
CspCI	CAANNNNNGTGG	2 cut(s)	241, 276
CviAII	CATG	7 cut(s)	331, 780, 790, 1158, 1268, 1807, 2110
CviQI	GTAC	4 cut(s)	793, 1109, 1188, 1973
DdeI	CTNAG	8 cut(s)	15, 375, 696, 798, 972, 2163, 2265, 2330
DpnI	GATC	7 cut(s)	444, 873, 977, 1092, 1275, 1359, 1503
DpnII	GATC	7 cut(s)	442, 871, 975, 1090, 1273, 1357, 1501
EaeI	YGGCCR	1 cut(s)	1488
Eam1104I	CTCTTC	4 cut(s)	811, 1023, 2100, 2311
EarI	CTCTTC	4 cut(s)	811, 1023, 2100, 2311
Ecl136II	GAGCTC	2 cut(s)	54, 802
Eco130I	CCWWGG	2 cut(s)	779, 1491
Eco147I	AGGCCT	1 cut(s)	1688
Eco24I	GRGCYC	2 cut(s)	56, 804
Eco31I	GGTCTC	1 cut(s)	889
Eco32I	GATATC	1 cut(s)	2232
Eco47I	GGWCC	3 cut(s)	228, 626, 1633
Eco53kI	GAGCTC	2 cut(s)	54, 802
Eco57I	CTGAAG	2 cut(s)	1259, 2343
Eco72I	CACGTG	2 cut(s)	497, 2360
Eco88I	CYCGRG	1 cut(s)	223
Eco91I	GGTNACC	1 cut(s)	1339
EcoICRI	GAGCTC	2 cut(s)	54, 802
EcoNI	CCTNNNNNAGG	1 cut(s)	223
EcoO109I	RGGNCCY	3 cut(s)	228, 626, 1633
EcoO65I	GGTNACC	1 cut(s)	1339
EcoRII	CCWGG	4 cut(s)	1282, 1635, 1918, 2211
EcoRV	GATATC	1 cut(s)	2232
EcoT14I	CCWWGG	2 cut(s)	779, 1491
EcoT38I	GRGCYC	2 cut(s)	56, 804
ErhI	CCWWGG	2 cut(s)	779, 1491
Esp3I	CGTCTC	1 cut(s)	28
FaeI	CATG	7 cut(s)	334, 783, 793, 1161, 1271, 1810, 2113
FalI	AAGNNNNNCTT	6 cut(s)	1729, 1761, 1945, 1977, 2268, 2300
FaqI	GGGAC	2 cut(s)	214, 612
FatI	CATG	7 cut(s)	330, 779, 789, 1157, 1267, 1806, 2109
FauI	CCCGC	3 cut(s)	240, 637, 691
FauNDI	CATATG	1 cut(s)	1229
FbaI	TGATCA	2 cut(s)	1357, 1501
FblI	GTMKAC	1 cut(s)	1910
FokI	GGATG	6 cut(s)	392, 749, 1266, 1694, 2027, 2227
FriOI	GRGCYC	2 cut(s)	56, 804
FspBI	CTAG	4 cut(s)	450, 588, 1466, 2118
GlaI	GCGC	1 cut(s)	12
GsuI	CTGGAG	3 cut(s)	67, 1287, 1794
HaeII	RGCGCY	1 cut(s)	14
HaeIII	GGCC	6 cut(s)	478, 593, 852, 1490, 1688, 2128
HapII	CCGG	6 cut(s)	49, 121, 162, 734, 853, 961
HgaI	GACGC	1 cut(s)	1917
HhaI	GCGC	1 cut(s)	13
Hin1II	CATG	7 cut(s)	334, 783, 793, 1161, 1271, 1810, 2113
Hin6I	GCGC	1 cut(s)	11
HinP1I	GCGC	1 cut(s)	11
HincII	GTYRAC	1 cut(s)	1350
HindII	GTYRAC	1 cut(s)	1350
HindIII	AAGCTT	2 cut(s)	707, 1313
HinfI	GANTC	7 cut(s)	33, 38, 362, 1224, 1294, 1724, 2082
HpaI	GTTAAC	1 cut(s)	1350
HpaII	CCGG	6 cut(s)	49, 121, 162, 734, 853, 961
HphI	GGTGA	6 cut(s)	162, 275, 672, 1064, 1333, 1382
Hpy166II	GTNNAC	2 cut(s)	1350, 1911
Hpy188I	TCNGA	5 cut(s)	108, 799, 975, 1981, 2000
Hpy8I	GTNNAC	2 cut(s)	1350, 1911
Hpy99I	CGWCG	1 cut(s)	1933
HpyAV	CCTTC	7 cut(s)	53, 352, 735, 1160, 1508, 1634, 1925
HpyCH4III	ACNGT	6 cut(s)	369, 678, 916, 922, 1734, 1977
HpyCH4IV	ACGT	5 cut(s)	384, 496, 538, 1750, 2359
HpyF10VI	GCNNNNNNNGC	5 cut(s)	706, 775, 1562, 1964, 2134
HpyF3I	CTNAG	8 cut(s)	15, 375, 696, 798, 972, 2163, 2265, 2330
HpySE526I	ACGT	5 cut(s)	384, 496, 538, 1750, 2359
Hsp92II	CATG	7 cut(s)	334, 783, 793, 1161, 1271, 1810, 2113
HspAI	GCGC	1 cut(s)	11
KflI	GGGWCCC	1 cut(s)	626
Kpn2I	TCCGGA	2 cut(s)	733, 960
KroI	GCCGGC	1 cut(s)	852
KroNI	GCCGGC	1 cut(s)	854
Ksp22I	TGATCA	2 cut(s)	1357, 1501
KspAI	GTTAAC	1 cut(s)	1350
Kzo9I	GATC	7 cut(s)	442, 871, 975, 1090, 1273, 1357, 1501
LguI	GCTCTTC	1 cut(s)	2100
LmnI	GCTCC	8 cut(s)	51, 59, 221, 766, 1412, 1523, 2119, 2322
LweI	GCATC	4 cut(s)	462, 836, 1774, 2026
MaeI	CTAG	4 cut(s)	450, 588, 1466, 2118
MaeII	ACGT	5 cut(s)	384, 496, 538, 1750, 2359
MaeIII	GTNAC	8 cut(s)	490, 517, 613, 678, 916, 1339, 1751, 2041
MalI	GATC	7 cut(s)	444, 873, 977, 1092, 1275, 1359, 1503
MboI	GATC	7 cut(s)	442, 871, 975, 1090, 1273, 1357, 1501
MfeI	CAATTG	4 cut(s)	816, 1383, 1626, 2054
MflI	RGATCY	3 cut(s)	871, 975, 1090
MhlI	GDGCHC	4 cut(s)	56, 298, 804, 2319
MlsI	TGGCCA	1 cut(s)	1490
MluNI	TGGCCA	1 cut(s)	1490
MlyI	GAGTC	1 cut(s)	1233
MmeI	TCCRAC	4 cut(s)	973, 1014, 1183, 1201
Mox20I	TGGCCA	1 cut(s)	1490
MroI	TCCGGA	2 cut(s)	733, 960
MroNI	GCCGGC	1 cut(s)	852
MroXI	GAANNNNTTC	2 cut(s)	42, 2007
MscI	TGGCCA	1 cut(s)	1490
MseI	TTAA	8 cut(s)	117, 885, 1044, 1349, 1461, 1590, 1736, 2255
Msp20I	TGGCCA	1 cut(s)	1490
MspA1I	CMGCKG	1 cut(s)	686
MspI	CCGG	6 cut(s)	49, 121, 162, 734, 853, 961
MspR9I	CCNGG	5 cut(s)	122, 1284, 1637, 1920, 2213
MunI	CAATTG	4 cut(s)	816, 1383, 1626, 2054
Mva1269I	GAATGC	4 cut(s)	61, 660, 1747, 2095
MvaI	CCWGG	4 cut(s)	1284, 1637, 1920, 2213
MvnI	CGCG	2 cut(s)	102, 345
MwoI	GCNNNNNNNGC	5 cut(s)	706, 775, 1562, 1964, 2134
NaeI	GCCGGC	1 cut(s)	854
NciI	CCSGG	1 cut(s)	122
NcoI	CCATGG	1 cut(s)	779
NdeI	CATATG	1 cut(s)	1229
NdeII	GATC	7 cut(s)	442, 871, 975, 1090, 1273, 1357, 1501
NgoMIV	GCCGGC	1 cut(s)	852
NheI	GCTAGC	1 cut(s)	449
NlaIII	CATG	7 cut(s)	334, 783, 793, 1161, 1271, 1810, 2113
NlaIV	GGNNCC	8 cut(s)	217, 230, 627, 628, 723, 1414, 1634, 2115
NmeAIII	GCCGAG	1 cut(s)	2322
NmuCI	GTSAC	4 cut(s)	490, 613, 678, 1339
NspI	RCATGY	1 cut(s)	793
PaeR7I	CTCGAG	1 cut(s)	223
PagI	TCATGA	1 cut(s)	330
PceI	AGGCCT	1 cut(s)	1688
PciI	ACATGT	1 cut(s)	789
PciSI	GCTCTTC	1 cut(s)	2100
PctI	GAATGC	4 cut(s)	61, 660, 1747, 2095
PdiI	GCCGGC	1 cut(s)	854
PdmI	GAANNNNTTC	2 cut(s)	42, 2007
PfeI	GAWTC	6 cut(s)	33, 38, 362, 1294, 1724, 2082
PflFI	GACNNNGTC	1 cut(s)	1430
PflMI	CCANNNNNTGG	1 cut(s)	1549
PfoI	TCCNGGA	2 cut(s)	1635, 1918
PleI	GAGTC	1 cut(s)	1232
PmaCI	CACGTG	2 cut(s)	497, 2360
PmlI	CACGTG	2 cut(s)	497, 2360
PpsI	GAGTC	1 cut(s)	1232
Ppu21I	YACGTR	2 cut(s)	497, 2360
PpuMI	RGGWCCY	3 cut(s)	228, 626, 1633
PscI	ACATGT	1 cut(s)	789
PsiI	TTATAA	2 cut(s)	557, 1616
Psp124BI	GAGCTC	2 cut(s)	56, 804
Psp5II	RGGWCCY	3 cut(s)	228, 626, 1633
Psp6I	CCWGG	4 cut(s)	1282, 1635, 1918, 2211
PspCI	CACGTG	2 cut(s)	497, 2360
PspEI	GGTNACC	1 cut(s)	1339
PspGI	CCWGG	4 cut(s)	1282, 1635, 1918, 2211
PspN4I	GGNNCC	8 cut(s)	217, 230, 627, 628, 723, 1414, 1634, 2115
PspPI	GGNCC	6 cut(s)	228, 591, 626, 850, 1633, 2126
PspPPI	RGGWCCY	3 cut(s)	228, 626, 1633
PspXI	VCTCGAGB	1 cut(s)	223
PsrI	GAACNNNNNNTAC	2 cut(s)	1894, 1926
PstI	CTGCAG	2 cut(s)	2143, 2221
PstNI	CAGNNNCTG	1 cut(s)	920
PsuI	RGATCY	3 cut(s)	871, 975, 1090
PsyI	GACNNNGTC	1 cut(s)	1430
RsaI	GTAC	4 cut(s)	794, 1110, 1189, 1974
RsaNI	GTAC	4 cut(s)	793, 1109, 1188, 1973
SacI	GAGCTC	2 cut(s)	56, 804
SapI	GCTCTTC	1 cut(s)	2100
SaqAI	TTAA	8 cut(s)	117, 885, 1044, 1349, 1461, 1590, 1736, 2255
Sau3AI	GATC	7 cut(s)	442, 871, 975, 1090, 1273, 1357, 1501
Sau96I	GGNCC	6 cut(s)	228, 591, 626, 850, 1633, 2126
SbfI	CCTGCAGG	1 cut(s)	2143
ScaI	AGTACT	1 cut(s)	1189
SchI	GAGTC	1 cut(s)	1233
ScrFI	CCNGG	5 cut(s)	122, 1284, 1637, 1920, 2213
SdaI	CCTGCAGG	1 cut(s)	2143
SduI	GDGCHC	4 cut(s)	56, 298, 804, 2319
SfaNI	GCATC	4 cut(s)	462, 836, 1774, 2026
SfcI	CTRYAG	3 cut(s)	981, 2139, 2217
Sfr274I	CTCGAG	1 cut(s)	223
SinI	GGWCC	3 cut(s)	228, 626, 1633
SlaI	CTCGAG	1 cut(s)	223
SmlI	CTYRAG	1 cut(s)	223
SmoI	CTYRAG	1 cut(s)	223
Sse8387I	CCTGCAGG	1 cut(s)	2143
SseBI	AGGCCT	1 cut(s)	1688
SsiI	CCGC	7 cut(s)	131, 233, 345, 630, 684, 1598, 1787
SspMI	CTAG	4 cut(s)	450, 588, 1466, 2118
SstI	GAGCTC	2 cut(s)	56, 804
StuI	AGGCCT	1 cut(s)	1688
StyD4I	CCNGG	5 cut(s)	120, 1282, 1635, 1918, 2211
StyI	CCWWGG	2 cut(s)	779, 1491
TaaI	ACNGT	6 cut(s)	369, 678, 916, 922, 1734, 1977
TaiI	ACGT	5 cut(s)	387, 499, 541, 1753, 2362
TaqI	TCGA	8 cut(s)	36, 94, 224, 664, 1900, 1931, 2205, 2228
TatI	WGTACW	3 cut(s)	792, 1187, 1972
TfiI	GAWTC	6 cut(s)	33, 38, 362, 1294, 1724, 2082
Tru1I	TTAA	8 cut(s)	117, 885, 1044, 1349, 1461, 1590, 1736, 2255
Tru9I	TTAA	8 cut(s)	117, 885, 1044, 1349, 1461, 1590, 1736, 2255
TscAI	CASTG	3 cut(s)	34, 424, 1261
TseFI	GTSAC	4 cut(s)	490, 613, 678, 1339
Tsp45I	GTSAC	4 cut(s)	490, 613, 678, 1339
TspGWI	ACGGA	1 cut(s)	955
TspRI	CASTG	3 cut(s)	34, 424, 1261
Tth111I	GACNNNGTC	1 cut(s)	1430
Van91I	CCANNNNNTGG	1 cut(s)	1549
VpaK11BI	GGWCC	3 cut(s)	228, 626, 1633
XagI	CCTNNNNNAGG	1 cut(s)	223
XapI	RAATTY	4 cut(s)	352, 422, 1288, 2003
XbaI	TCTAGA	1 cut(s)	1465
XceI	RCATGY	1 cut(s)	793
XhoI	CTCGAG	1 cut(s)	223
XmiI	GTMKAC	1 cut(s)	1910
XmnI	GAANNNNTTC	2 cut(s)	42, 2007
XspI	CTAG	4 cut(s)	450, 588, 1466, 2118
ZrmI	AGTACT	1 cut(s)	1189

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.