Rh4DG002500

AarF domain-containing protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4D
OG0011327
Physical Location & Seq
Forward (+)
443730 .. 491669
47940 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4DG002500.1

Sequence Viewer

Length: 1719 bp
ATGGATGCAGCGCCTCAGCTCGTCTCCACTGGAATCGAATCCCTTCGCCGGAGCTCCAAGCATTCATTCCCGACCACAACCTCCAGTAGAGTTCGCGTTCGCGTTCCGAAACGATTTAACCGGGTTCTTGCGGTTGCCACCGACCCCAAACCCACCAAGTCAGGCTCATCGCCAGACTCTGTCAATGGCTCCTCCTCGAGGTCCCCGCCTATCAATGGAGTTTCCACGAGAATTGGAGATGTTTCAAAGGAAATCAAAAGGGTCCGAGCACAGATGGAAGAAAACGAAGACTTGGCAATACTCATGAAAGGTCTTCGCGGACAAAATTTGAAGGATTCACAGTTTGCTGAGGATGACGTTCAGCTTCGTCTTGTTGAGGTAGATGAAAGCAGTGAATTTTTGCCTGTGGTATATGATCCTGCTAGCATCTCTTCTTATTGGGGAAAACGGCCTCGTGCTGTTGTGACACGTGTAATTCAATTACTCTCTGTAACTGGGGGTTTCCTTTCACGTCTTGCAGGGGATTTTATAAACAAGAAAATCAAAGAGAATGAAGTTGCTAGGGCCATTGAAATAAGGGAAATTGTGACCTCTTTGGGTCCCGCATATATCAAACTTGGGCAAGCATTGAGCATTCGACCAGATATACTGTCACCCGCTGCAATGACTGAGCTGCAAAAGCTTTGTGATAAGGTTCCTTCATTTCCGGATGATATAGCTATGGCTCTCATTGAGGAGGAGCTTGGTCAGCCATGGCAAAACATCTACTCTGAGCTCTCTTCCTCTCCAATTGCTGCTGCATCTCTTGGGCAAGTATATAAGGGCCGGCTAAAAGAAAATGGAGATCTCGTGGCTGTTAAAGTGCAGAGACCTTTTGTTCTTGAAACAGTAACTGTTGATTTGTTTATCATACGGAACTTGGGTTTGGTTCTCCGGAGGTTTCCTCAGATCTCTGTAGATGTGGTTGGATTAGTTGATGAATGGGCAGCTCGTTTCTTTGAAGAGTTGGATTATATTAATGAGGGTGAGAATGGACTACTCTTTGCTGAAATGATGAGAAAAGATCTTCCACAGGTGGTTGTACCAAAAACCTACCCAAAATATACATCAAGAAAGGTTCTTACTACATCATGGTTAGAAGGAGAGAAGCTATCACAAAGTACTGAAAGTGATGTTGGAGAACTGGTCAATGTTGGAGTCATATGCTACCTGAAGCAGTTGCTTGACACTGGATTATTTCATGCTGATCCTCATCCTGGGAATTTGATTCGCACTCCAGATGGCAAGCTTGCCATACTTGATTTTGGTCTGGTCACCAAGTTAACTGATGATCAAAAGTATGGAATGATCGAGGCAATTGCTCACCTTATTCATCGTGATTATGGAGCCATAGTCAAAGACTTCGTCAAGCTTGGTTTTATTGACGAGGGGGTTAATCTAGAACCTATTTTGCCTGTTCTGGCCAAGGTTTTTGATCAGGCTCTTGAAGGTGGAGGAGCAAAAAATATCAACTTCCAAGACTTGGCAGCAGATTTGGCACAAATCACATTTGACTATCCATTTAAGATACCGCCTTATTTTGCTCTTATAATTAGAGCAATTGGGGTCCTGGAAGGCATAGCTTTAGTGGGAAATCCTGATTTTGCTATTGTGGATGAGGCCTATCCATATATTGCCCAGGTATTTGTACTCATTAATATGATTCTTTTTAGACATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ABC1 APH

Protein Analysis

572

Amino Acids

63.27

Weight (kDa)

5.47

Isoelectric Point (pI)

38.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC1 PF03109 227 - 466 2.7e-63 ABC1 atypical kinase-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 530, 1589
AbsI CCTCGAGG 1 cut(s) 196
AccB7I CCANNNNNTGG 1 cut(s) 1522
AccII CGCG 3 cut(s) 96, 102, 318
AccIII TCCGGA 2 cut(s) 706, 933
AciI CCGC 6 cut(s) 131, 206, 318, 603, 657, 1571
AclWI GGATC 2 cut(s) 410, 1241
AcoI YGGCCR 1 cut(s) 1461
AcsI RAATTY 3 cut(s) 325, 395, 1261
AcuI CTGAAG 1 cut(s) 1232
AcvI CACGTG 1 cut(s) 470
AfaI GTAC 3 cut(s) 1083, 1162, 1689
AfiI CCNNNNNNNGG 5 cut(s) 48, 198, 215, 1256, 1522
AflIII ACRYGT 2 cut(s) 467, 469
AgsI TTSAA 7 cut(s) 246, 331, 479, 572, 884, 1001, 1487
AjiI CACGTC 1 cut(s) 512
AjnI CCWGG 3 cut(s) 1255, 1608, 1677
AjuI GAANNNNNNNTTGG 6 cut(s) 50, 82, 908, 940, 1158, 1190
Alw21I GWGCWC 3 cut(s) 56, 271, 777
Alw26I GTCTC 2 cut(s) 28, 862
AlwI GGATC 2 cut(s) 410, 1241
AlwNI CAGNNNCTG 2 cut(s) 179, 893
Ama87I CYCGRG 1 cut(s) 196
Aor13HI TCCGGA 2 cut(s) 706, 933
AoxI GGCC 5 cut(s) 449, 564, 823, 1461, 1659
ApeKI GCWGC 7 cut(s) 8, 659, 673, 794, 797, 986, 1526
ApoI RAATTY 3 cut(s) 325, 395, 1261
ArsI GACNNNNNNTTYG 2 cut(s) 1389, 1421
AseI ATTAAT 2 cut(s) 1017, 1695
Asp700I GAANNNNTTC 1 cut(s) 42
AspLEI GCGC 1 cut(s) 13
AspS9I GGNCC 6 cut(s) 201, 262, 564, 599, 823, 1606
AsuC2I CCSGG 1 cut(s) 122
AsuHPI GGTGA 4 cut(s) 645, 1037, 1306, 1355
AsuNHI GCTAGC 1 cut(s) 422
AvaI CYCGRG 1 cut(s) 196
AvaII GGWCC 4 cut(s) 201, 262, 599, 1606
BalI TGGCCA 1 cut(s) 1463
BanII GRGCYC 2 cut(s) 56, 777
BauI CACGAG 3 cut(s) 226, 453, 848
BbrPI CACGTG 1 cut(s) 470
BbsI GAAGAC 2 cut(s) 294, 305
Bbv12I GWGCWC 3 cut(s) 56, 271, 777
BbvCI CCTCAGC 2 cut(s) 15, 348
BbvI GCAGC 7 cut(s) 20, 646, 660, 781, 784, 998, 1538
BccI CCATC 2 cut(s) 268, 1274
BceAI ACGGC 1 cut(s) 464
BcgI CGANNNNNNTGC 2 cut(s) 1340, 1374
BciT130I CCWGG 3 cut(s) 1257, 1610, 1679
BclI TGATCA 2 cut(s) 1330, 1474
BcnI CCSGG 1 cut(s) 122
BcoDI GTCTC 2 cut(s) 28, 862
BfaI CTAG 3 cut(s) 423, 561, 1439
BfmI CTRYAG 1 cut(s) 954
BfoI RGCGCY 1 cut(s) 14
BglII AGATCT 3 cut(s) 844, 948, 1063
BisI GCNGC 7 cut(s) 9, 660, 674, 795, 798, 987, 1527
BlsI GCNGC 7 cut(s) 10, 661, 675, 796, 799, 988, 1528
BmcAI AGTACT 1 cut(s) 1162
Bme1390I CCNGG 4 cut(s) 122, 1257, 1610, 1679
Bme18I GGWCC 4 cut(s) 201, 262, 599, 1606
BmeT110I CYCGRG 1 cut(s) 196
BmgBI CACGTC 1 cut(s) 512
BmgT120I GGNCC 6 cut(s) 201, 262, 564, 599, 823, 1606
BmiI GGNNCC 8 cut(s) 190, 203, 263, 600, 601, 696, 1387, 1607
BmrFI CCNGG 4 cut(s) 122, 1257, 1610, 1679
BmrI ACTGGG 1 cut(s) 504
BmsI GCATC 2 cut(s) 435, 809
BmtI GCTAGC 1 cut(s) 426
BmuI ACTGGG 1 cut(s) 504
BpiI GAAGAC 2 cut(s) 294, 305
BplI GAGNNNNNCTC 2 cut(s) 928, 960
BpmI CTGGAG 2 cut(s) 67, 1260
Bpu10I CCTNAGC 2 cut(s) 15, 348
BpuMI CCSGG 1 cut(s) 122
BsaAI YACGTR 1 cut(s) 470
BsaBI GATNNNNATC 1 cut(s) 1251
BsaI GGTCTC 1 cut(s) 862
BsaJI CCNNGG 4 cut(s) 752, 1256, 1464, 1677
BsaWI WCCGGW 2 cut(s) 706, 933
BsaXI ACNNNNNCTCC 6 cut(s) 834, 864, 1170, 1200, 1377, 1407
Bsc4I CCNNNNNNNGG 5 cut(s) 48, 198, 215, 1256, 1522
Bse118I RCCGGY 1 cut(s) 825
Bse1I ACTGG 5 cut(s) 34, 84, 499, 1188, 1234
Bse3DI GCAATG 1 cut(s) 669
Bse8I GATNNNNATC 1 cut(s) 1251
BseAI TCCGGA 2 cut(s) 706, 933
BseBI CCWGG 3 cut(s) 1257, 1610, 1679
BseDI CCNNGG 4 cut(s) 752, 1256, 1464, 1677
BseGI GGATG 5 cut(s) 10, 358, 715, 1252, 1660
BseJI GATNNNNATC 1 cut(s) 1251
BseLI CCNNNNNNNGG 5 cut(s) 48, 198, 215, 1256, 1522
BseMI GCAATG 1 cut(s) 669
BseMII CTCAG 5 cut(s) 29, 339, 660, 762, 959
BseNI ACTGG 5 cut(s) 34, 84, 499, 1188, 1234
BseRI GAGGAG 5 cut(s) 181, 184, 749, 752, 1509
BseXI GCAGC 7 cut(s) 20, 646, 660, 781, 784, 998, 1538
BsgI GTGCAG 1 cut(s) 884
Bsh1236I CGCG 3 cut(s) 96, 102, 318
BshFI GGCC 5 cut(s) 451, 566, 825, 1463, 1661
BsiHKAI GWGCWC 3 cut(s) 56, 271, 777
BsiHKCI CYCGRG 1 cut(s) 196
BsiSI CCGG 5 cut(s) 49, 121, 707, 826, 934
BslFI GGGAC 2 cut(s) 187, 585
BslI CCNNNNNNNGG 5 cut(s) 48, 198, 215, 1256, 1522
BsmAI GTCTC 2 cut(s) 28, 862
BsmBI CGTCTC 1 cut(s) 28
BsmFI GGGAC 2 cut(s) 187, 585
BsmI GAATGC 2 cut(s) 61, 633
BsnI GGCC 5 cut(s) 451, 566, 825, 1463, 1661
Bso31I GGTCTC 1 cut(s) 862
BsoBI CYCGRG 1 cut(s) 196
Bsp1286I GDGCHC 3 cut(s) 56, 271, 777
Bsp13I TCCGGA 2 cut(s) 706, 933
Bsp143I GATC 8 cut(s) 415, 844, 948, 1063, 1246, 1330, 1347, 1474
Bsp19I CCATGG 1 cut(s) 752
BspACI CCGC 6 cut(s) 131, 206, 318, 603, 657, 1571
BspANI GGCC 5 cut(s) 451, 566, 825, 1463, 1661
BspCNI CTCAG 5 cut(s) 28, 340, 661, 763, 958
BspEI TCCGGA 2 cut(s) 706, 933
BspFNI CGCG 3 cut(s) 96, 102, 318
BspHI TCATGA 1 cut(s) 303
BspLI GGNNCC 8 cut(s) 190, 203, 263, 600, 601, 696, 1387, 1607
BspOI GCTAGC 1 cut(s) 426
BspPI GGATC 2 cut(s) 410, 1241
BspTNI GGTCTC 1 cut(s) 862
BsrDI GCAATG 1 cut(s) 669
BsrFI RCCGGY 1 cut(s) 825
BsrI ACTGG 5 cut(s) 34, 84, 499, 1188, 1234
BssAI RCCGGY 1 cut(s) 825
BssECI CCNNGG 4 cut(s) 752, 1256, 1464, 1677
BssMI GATC 8 cut(s) 415, 844, 948, 1063, 1246, 1330, 1347, 1474
BssSI CACGAG 3 cut(s) 226, 453, 848
BssT1I CCWWGG 2 cut(s) 752, 1464
Bst2BI CACGAG 3 cut(s) 226, 453, 848
Bst2UI CCWGG 3 cut(s) 1257, 1610, 1679
Bst4CI ACNGT 4 cut(s) 342, 651, 889, 895
Bst6I CTCTTC 3 cut(s) 436, 784, 996
BstBAI YACGTR 1 cut(s) 470
BstC8I GCNNGC 5 cut(s) 424, 624, 827, 1286, 1290
BstDEI CTNAG 5 cut(s) 15, 348, 669, 771, 945
BstDSI CCRYGG 1 cut(s) 752
BstEII GGTNACC 1 cut(s) 1312
BstENI CCTNNNNNAGG 1 cut(s) 196
BstF5I GGATG 5 cut(s) 10, 358, 715, 1252, 1660
BstFNI CGCG 3 cut(s) 96, 102, 318
BstH2I RGCGCY 1 cut(s) 14
BstHHI GCGC 1 cut(s) 13
BstKTI GATC 8 cut(s) 418, 847, 951, 1066, 1249, 1333, 1350, 1477
BstMAI GTCTC 2 cut(s) 28, 862
BstMBI GATC 8 cut(s) 415, 844, 948, 1063, 1246, 1330, 1347, 1474
BstMWI GCNNNNNNNGC 3 cut(s) 679, 748, 1535
BstNI CCWGG 3 cut(s) 1257, 1610, 1679
BstPI GGTNACC 1 cut(s) 1312
BstSCI CCNGG 4 cut(s) 120, 1255, 1608, 1677
BstSFI CTRYAG 1 cut(s) 954
BstUI CGCG 3 cut(s) 96, 102, 318
BstV1I GCAGC 7 cut(s) 20, 646, 660, 781, 784, 998, 1538
BstV2I GAAGAC 2 cut(s) 294, 305
BstX2I RGATCY 3 cut(s) 844, 948, 1063
BstYI RGATCY 3 cut(s) 844, 948, 1063
BsuRI GGCC 5 cut(s) 451, 566, 825, 1463, 1661
BtgI CCRYGG 1 cut(s) 752
BtgZI GCGATG 1 cut(s) 153
BtrI CACGTC 1 cut(s) 512
BtsCI GGATG 5 cut(s) 10, 358, 715, 1252, 1660
BtsI GCAGTG 1 cut(s) 397
BtsIMutI CAGTG 3 cut(s) 27, 397, 1227
Cac8I GCNNGC 5 cut(s) 424, 624, 827, 1286, 1290
CaiI CAGNNNCTG 2 cut(s) 179, 893
CciI TCATGA 1 cut(s) 303
CfoI GCGC 1 cut(s) 13
Cfr10I RCCGGY 1 cut(s) 825
Cfr13I GGNCC 6 cut(s) 201, 262, 564, 599, 823, 1606
Csp6I GTAC 3 cut(s) 1082, 1161, 1688
CspCI CAANNNNNGTGG 2 cut(s) 214, 249
CviAII CATG 4 cut(s) 304, 753, 1131, 1241
CviQI GTAC 3 cut(s) 1082, 1161, 1688
DdeI CTNAG 5 cut(s) 15, 348, 669, 771, 945
DpnI GATC 8 cut(s) 417, 846, 950, 1065, 1248, 1332, 1349, 1476
DpnII GATC 8 cut(s) 415, 844, 948, 1063, 1246, 1330, 1347, 1474
EaeI YGGCCR 1 cut(s) 1461
Eam1104I CTCTTC 3 cut(s) 436, 784, 996
EarI CTCTTC 3 cut(s) 436, 784, 996
Ecl136II GAGCTC 2 cut(s) 54, 775
Eco130I CCWWGG 2 cut(s) 752, 1464
Eco147I AGGCCT 1 cut(s) 1661
Eco24I GRGCYC 2 cut(s) 56, 777
Eco31I GGTCTC 1 cut(s) 862
Eco47I GGWCC 4 cut(s) 201, 262, 599, 1606
Eco53kI GAGCTC 2 cut(s) 54, 775
Eco57I CTGAAG 1 cut(s) 1232
Eco72I CACGTG 1 cut(s) 470
Eco88I CYCGRG 1 cut(s) 196
Eco91I GGTNACC 1 cut(s) 1312
EcoICRI GAGCTC 2 cut(s) 54, 775
EcoNI CCTNNNNNAGG 1 cut(s) 196
EcoO109I RGGNCCY 3 cut(s) 201, 599, 1606
EcoO65I GGTNACC 1 cut(s) 1312
EcoRII CCWGG 3 cut(s) 1255, 1608, 1677
EcoT14I CCWWGG 2 cut(s) 752, 1464
EcoT38I GRGCYC 2 cut(s) 56, 777
ErhI CCWWGG 2 cut(s) 752, 1464
Esp3I CGTCTC 1 cut(s) 28
FaeI CATG 4 cut(s) 307, 756, 1134, 1244
FaqI GGGAC 2 cut(s) 187, 585
FatI CATG 4 cut(s) 303, 752, 1130, 1240
FauI CCCGC 3 cut(s) 213, 610, 664
FauNDI CATATG 1 cut(s) 1202
FbaI TGATCA 2 cut(s) 1330, 1474
Fnu4HI GCNGC 7 cut(s) 9, 660, 674, 795, 798, 987, 1527
FokI GGATG 5 cut(s) 17, 365, 722, 1239, 1667
FriOI GRGCYC 2 cut(s) 56, 777
Fsp4HI GCNGC 7 cut(s) 9, 660, 674, 795, 798, 987, 1527
FspBI CTAG 3 cut(s) 423, 561, 1439
GlaI GCGC 1 cut(s) 12
GluI GCNGC 7 cut(s) 9, 660, 674, 795, 798, 987, 1527
GsuI CTGGAG 2 cut(s) 67, 1260
HaeII RGCGCY 1 cut(s) 14
HaeIII GGCC 5 cut(s) 451, 566, 825, 1463, 1661
HapII CCGG 5 cut(s) 49, 121, 707, 826, 934
HhaI GCGC 1 cut(s) 13
Hin1II CATG 4 cut(s) 307, 756, 1134, 1244
Hin6I GCGC 1 cut(s) 11
HinP1I GCGC 1 cut(s) 11
HincII GTYRAC 1 cut(s) 1323
HindII GTYRAC 1 cut(s) 1323
HindIII AAGCTT 3 cut(s) 680, 1286, 1409
HinfI GANTC 7 cut(s) 33, 38, 176, 335, 1197, 1267, 1702
HpaI GTTAAC 1 cut(s) 1323
HpaII CCGG 5 cut(s) 49, 121, 707, 826, 934
HphI GGTGA 4 cut(s) 645, 1037, 1306, 1355
Hpy166II GTNNAC 1 cut(s) 1323
Hpy188I TCNGA 4 cut(s) 108, 266, 772, 948
Hpy8I GTNNAC 1 cut(s) 1323
HpyAV CCTTC 6 cut(s) 53, 325, 708, 1133, 1481, 1607
HpyCH4III ACNGT 4 cut(s) 342, 651, 889, 895
HpyCH4IV ACGT 3 cut(s) 357, 469, 511
HpyCH4V TGCA 6 cut(s) 8, 518, 662, 676, 800, 865
HpyF10VI GCNNNNNNNGC 3 cut(s) 679, 748, 1535
HpyF3I CTNAG 5 cut(s) 15, 348, 669, 771, 945
HpySE526I ACGT 3 cut(s) 357, 469, 511
Hsp92II CATG 4 cut(s) 307, 756, 1134, 1244
HspAI GCGC 1 cut(s) 11
KflI GGGWCCC 1 cut(s) 599
Kpn2I TCCGGA 2 cut(s) 706, 933
KroI GCCGGC 1 cut(s) 825
KroNI GCCGGC 1 cut(s) 827
Ksp22I TGATCA 2 cut(s) 1330, 1474
KspAI GTTAAC 1 cut(s) 1323
Kzo9I GATC 8 cut(s) 415, 844, 948, 1063, 1246, 1330, 1347, 1474
LmnI GCTCC 6 cut(s) 51, 59, 194, 739, 1385, 1496
Lsp1109I GCAGC 7 cut(s) 20, 646, 660, 781, 784, 998, 1538
LweI GCATC 2 cut(s) 435, 809
MaeI CTAG 3 cut(s) 423, 561, 1439
MaeII ACGT 3 cut(s) 357, 469, 511
MaeIII GTNAC 6 cut(s) 463, 490, 586, 651, 889, 1312
MalI GATC 8 cut(s) 417, 846, 950, 1065, 1248, 1332, 1349, 1476
MboI GATC 8 cut(s) 415, 844, 948, 1063, 1246, 1330, 1347, 1474
MboII GAAGA 7 cut(s) 290, 299, 305, 423, 771, 1013, 1058
MfeI CAATTG 3 cut(s) 789, 1356, 1599
MflI RGATCY 3 cut(s) 844, 948, 1063
MhlI GDGCHC 3 cut(s) 56, 271, 777
MlsI TGGCCA 1 cut(s) 1463
MluNI TGGCCA 1 cut(s) 1463
MlyI GAGTC 2 cut(s) 170, 1206
MmeI TCCRAC 4 cut(s) 946, 987, 1156, 1174
Mox20I TGGCCA 1 cut(s) 1463
MroI TCCGGA 2 cut(s) 706, 933
MroNI GCCGGC 1 cut(s) 825
MroXI GAANNNNTTC 1 cut(s) 42
MscI TGGCCA 1 cut(s) 1463
MseI TTAA 8 cut(s) 117, 858, 1017, 1322, 1434, 1563, 1695, 1717
MslI CAYNNNNRTG 1 cut(s) 1697
Msp20I TGGCCA 1 cut(s) 1463
MspA1I CMGCKG 1 cut(s) 659
MspI CCGG 5 cut(s) 49, 121, 707, 826, 934
MspR9I CCNGG 4 cut(s) 122, 1257, 1610, 1679
MunI CAATTG 3 cut(s) 789, 1356, 1599
Mva1269I GAATGC 2 cut(s) 61, 633
MvaI CCWGG 3 cut(s) 1257, 1610, 1679
MvnI CGCG 3 cut(s) 96, 102, 318
MwoI GCNNNNNNNGC 3 cut(s) 679, 748, 1535
NaeI GCCGGC 1 cut(s) 827
NciI CCSGG 1 cut(s) 122
NcoI CCATGG 1 cut(s) 752
NdeI CATATG 1 cut(s) 1202
NdeII GATC 8 cut(s) 415, 844, 948, 1063, 1246, 1330, 1347, 1474
NgoMIV GCCGGC 1 cut(s) 825
NheI GCTAGC 1 cut(s) 422
NlaIII CATG 4 cut(s) 307, 756, 1134, 1244
NlaIV GGNNCC 8 cut(s) 190, 203, 263, 600, 601, 696, 1387, 1607
NmuCI GTSAC 4 cut(s) 463, 586, 651, 1312
PaeR7I CTCGAG 1 cut(s) 196
PagI TCATGA 1 cut(s) 303
PceI AGGCCT 1 cut(s) 1661
PctI GAATGC 2 cut(s) 61, 633
PdiI GCCGGC 1 cut(s) 827
PdmI GAANNNNTTC 1 cut(s) 42
PfeI GAWTC 5 cut(s) 33, 38, 335, 1267, 1702
PflFI GACNNNGTC 2 cut(s) 179, 1403
PflMI CCANNNNNTGG 1 cut(s) 1522
PfoI TCCNGGA 1 cut(s) 1608
PkrI GCNGC 7 cut(s) 10, 661, 675, 796, 799, 988, 1528
PleI GAGTC 2 cut(s) 170, 1205
PmaCI CACGTG 1 cut(s) 470
PmlI CACGTG 1 cut(s) 470
PpsI GAGTC 2 cut(s) 170, 1205
Ppu21I YACGTR 1 cut(s) 470
PpuMI RGGWCCY 3 cut(s) 201, 599, 1606
PshBI ATTAAT 2 cut(s) 1017, 1695
PsiI TTATAA 2 cut(s) 530, 1589
Psp124BI GAGCTC 2 cut(s) 56, 777
Psp5II RGGWCCY 3 cut(s) 201, 599, 1606
Psp6I CCWGG 3 cut(s) 1255, 1608, 1677
PspCI CACGTG 1 cut(s) 470
PspEI GGTNACC 1 cut(s) 1312
PspGI CCWGG 3 cut(s) 1255, 1608, 1677
PspN4I GGNNCC 8 cut(s) 190, 203, 263, 600, 601, 696, 1387, 1607
PspPI GGNCC 6 cut(s) 201, 262, 564, 599, 823, 1606
PspPPI RGGWCCY 3 cut(s) 201, 599, 1606
PspXI VCTCGAGB 1 cut(s) 196
PstNI CAGNNNCTG 2 cut(s) 179, 893
PsuI RGATCY 3 cut(s) 844, 948, 1063
PsyI GACNNNGTC 2 cut(s) 179, 1403
RsaI GTAC 3 cut(s) 1083, 1162, 1689
RsaNI GTAC 3 cut(s) 1082, 1161, 1688
RseI CAYNNNNRTG 1 cut(s) 1697
SacI GAGCTC 2 cut(s) 56, 777
SaqAI TTAA 8 cut(s) 117, 858, 1017, 1322, 1434, 1563, 1695, 1717
SatI GCNGC 7 cut(s) 9, 660, 674, 795, 798, 987, 1527
Sau3AI GATC 8 cut(s) 415, 844, 948, 1063, 1246, 1330, 1347, 1474
Sau96I GGNCC 6 cut(s) 201, 262, 564, 599, 823, 1606
ScaI AGTACT 1 cut(s) 1162
SchI GAGTC 2 cut(s) 170, 1206
ScrFI CCNGG 4 cut(s) 122, 1257, 1610, 1679
SduI GDGCHC 3 cut(s) 56, 271, 777
SfaNI GCATC 2 cut(s) 435, 809
SfcI CTRYAG 1 cut(s) 954
Sfr274I CTCGAG 1 cut(s) 196
SinI GGWCC 4 cut(s) 201, 262, 599, 1606
SlaI CTCGAG 1 cut(s) 196
SmiMI CAYNNNNRTG 1 cut(s) 1697
SmlI CTYRAG 1 cut(s) 196
SmoI CTYRAG 1 cut(s) 196
SseBI AGGCCT 1 cut(s) 1661
SsiI CCGC 6 cut(s) 131, 206, 318, 603, 657, 1571
SspMI CTAG 3 cut(s) 423, 561, 1439
SstI GAGCTC 2 cut(s) 56, 777
StuI AGGCCT 1 cut(s) 1661
StyD4I CCNGG 4 cut(s) 120, 1255, 1608, 1677
StyI CCWWGG 2 cut(s) 752, 1464
TaaI ACNGT 4 cut(s) 342, 651, 889, 895
TaiI ACGT 3 cut(s) 360, 472, 514
TaqI TCGA 4 cut(s) 36, 197, 637, 1350
TatI WGTACW 2 cut(s) 1160, 1687
TfiI GAWTC 5 cut(s) 33, 38, 335, 1267, 1702
Tru1I TTAA 8 cut(s) 117, 858, 1017, 1322, 1434, 1563, 1695, 1717
Tru9I TTAA 8 cut(s) 117, 858, 1017, 1322, 1434, 1563, 1695, 1717
TscAI CASTG 3 cut(s) 34, 397, 1234
TseFI GTSAC 4 cut(s) 463, 586, 651, 1312
TseI GCWGC 7 cut(s) 8, 659, 673, 794, 797, 986, 1526
Tsp45I GTSAC 4 cut(s) 463, 586, 651, 1312
TspDTI ATGAA 8 cut(s) 54, 320, 399, 567, 690, 993, 1229, 1361
TspGWI ACGGA 1 cut(s) 928
TspRI CASTG 3 cut(s) 34, 397, 1234
Tth111I GACNNNGTC 2 cut(s) 179, 1403
Van91I CCANNNNNTGG 1 cut(s) 1522
VpaK11BI GGWCC 4 cut(s) 201, 262, 599, 1606
VspI ATTAAT 2 cut(s) 1017, 1695
XagI CCTNNNNNAGG 1 cut(s) 196
XapI RAATTY 3 cut(s) 325, 395, 1261
XbaI TCTAGA 1 cut(s) 1438
XhoI CTCGAG 1 cut(s) 196
XmnI GAANNNNTTC 1 cut(s) 42
XspI CTAG 3 cut(s) 423, 561, 1439
ZrmI AGTACT 1 cut(s) 1162
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.