FvH4_4g04020
ERF Family

Transducin WD40 repeat-like superfamily protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0007851
Physical Location & Seq
Forward (+)
3483099 .. 3487554
4456 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g04020.t2

Sequence Viewer

Length: 2709 bp
ATGTCGGCCTTATCGGCTCGCCGCTTCAAAGACAGGAGCGCTGTCTCCGCCGGACCCACCAAACCCAAGCCGGACAAGAGATCCCCCAGCGTCGGCAAGGAGAATCCACCGGGGCCCACTTTCCGGACCTCGGCCCAGAAGCCCACCATGCGGCCCGTTCCACGTGTCGACAAGGCGGCGGCGAGCGGCGGAGGCGAGGCGCGTGCGCGGTGGTCTATGCCTTCCGTGGCGGCGAAAGGTAGGAGCTCTAGCCCTTCTGAGTTTTTTAGAGTTGCGTCGGGGAACGTCGGGCCGAAAAGTCGGCGGGTTTCGGTGGATCGGGTCGAGAGGGGTCCGAGTCCAAATCCGGGTTTGGAGCGGTCGGGGAGTGCGGGGAGGTGTTTGAGTAGGGGGAGAGTGTCAGGGGTTAGGGATTTGGAAGTTAAAGCTAGTCAATTGGGGGTTAGGGTTAGGGATTCGAAAATTGATGAGGGTAAAATTGGGGTCAGAAAGAATGGGATTTCTGTAGAATCGGTGGAGATTGAGGCGAATTTGAATGGGTTGAATGGGAATAGGTCCAATTTGAAAAACCCAGATGGGGTTGATGGTAGGGTTTTGGAGATAAGCAGTAGTGGGAAGTGTAGAAGTAGTGATACTAGTGAGAAATGTGTGAGCAATAGGAAGGTTTGGGAGGGATCGAAAGAGAAGGGGTTGAAGGAGGAAGGTAGTAATGGCGGTCGAGTTGGTGTGAAGCATTCTAGTAAGCTTCATGAGAAGCTTGCTTTTTTGGAAGGGAAGGTGAAGAGGATTGCGTCGGATATAAAGAAGACTAAGGAGATTTTGGATATGAATAACCCAGATGCGTCGAAGGTGATACTTTCGGATATTCAGGAGAAGATTTCGGGGATTGAGAAGGCCATGGTGCATGTTTCCAATGGCTCTGGTTGTAAGATGTTGAAAGGTAACGAGCAGGACGCCAAAGTGGTTGAGAATGGGCACATTGAGCAGGTGAGTAATGCGAAGAGTTTGGTTAAAGGGTTGAACCGTGAGGAGTTAGAAGCTAGACTGTTTCCTCATCATAAGTTAATTAGAAACCGCACAGCGATGAAAGCATCGTCTGAGACCTCTCAAGGTCAAGTTGTTGAAACCAGTAGTGAATTGACAGTGGATGAGAAGAAAGTGTGCCCTGTAGATGAGAACCCTATTGCGATAGAGTTCCTGGCTTCCTTGGATAATGAGCAAACTAGAGGTACCGCAAGGGATGGACAGGAGGATATTGAAACTTGTGAGGTGCAAGCAGTAGATGGTGGCACCACTGTGGGAGTTGAAAAATCTTCAAAAATGGTCACCGGCAAGCATGATGACGATCTCATTCTCACAACTGATGAAACACTTGAAGATTCTGCTGAACAGGAGAATAGACAAGTGATCATTGATGATGAAACTGAGGATACTAGCATTTACCAGCTCAATGGAATAGGCCAAAAGACCTCAACTGGTGGGTGGTTTATGTCTGAGGGAGAGTCAGTTCTTCTTGCTCACGATGATGGTTCATGCACCTTCTATGATATTGTAAACGCTGAGGAAAAGGCTTTGTACAAGCCTCCTGCAGGAGTTTCACCTAACATTTGGAGAGATTGTTGGATAATCCGAGCTCCTAGTGCAGATGGTTGCTCGGGAAGGTATGTCGTGGCGGCATCTGCTGGAAATACGATGGATTCAGGATTTTGTTCGTGGGATTTTTATGCCAAAGATGTACGTGCTTTCCATATTGATGATGGTTTAGCCCCGTCAAGAACAGTGCTTGGCCCCCTTCCTGACAACATCTCATACAGAAGAAACACTTTGTCTAATCTTTTGGATCCAGAAACTCAACAATGGTGGTATAGACCTTGTGGACCTCTTATGGTGTCAACTGCCACCTGTCAGAGAGTTGTGAGAATCTATGACATTCGTGATGGGGAGCAAGTAATGAAATGGGATGTCCCAAAGCCTGTCTTAACAATGGATAATTCAAGCCCCTTGCAGTGGAGAAACAGAGGAAAAGTTGTTGTAGCTGACATTGAAACCATTTCCGTATGGGATGTGAACTCTCTCACCCCTCAACCTTTATTATCTGTTTCTTCTGCTGGTCAGAAAATCTCTGCTCTTCATGTGAATAACACTGATTCTGAACTTGGTGGCGGAGTTCGCCAGAGAGTAAGTTCAGCAGAAGCAGAAGGAAATGATGGAGTGTTCTGTACCCAAGATTCAATAAACATTCTAGACTTCCGCAATCCGTCTGGTATAGGTCTGAAAATACCAAAGCTTGGTGTTACTGCGCAGTCAGTTTTCTCTCGTGGAGATTCCATCTTCCTTGGCTGCTCAAATGGAAGGTCAGGATGGAAAAAACAGTCCTCTTCACAAGTGCAACAGTTCTCAATTCGAAAACAAAGGCTATCGAACACTTATGACTTGCCTGAATCAAATGCTCACAGCCATCACACAGCTATTACTCAAGTTTGGGGGAACTCAAACCTTGTGATGGGTATCTGTGGATTGGGGCTCTTTGTGTTTGATGCCCTGAAGGATGATGGTGTGCCATCTTTCACCAGTGATAGTGGAAGCACTCAGAAAGATCGTGAAGTCATTGGCCCAGATGACTTGTATGCTCCTTCTTTTGATTACTCAGACTCTCGTGCTCTTATTATATCAAGAGATCGCCCAGCATTATGGAGGCAGTTATCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005618 GO:0005623 GO:0030312 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

903

Amino Acids

98.05

Weight (kDa)

7.18

Isoelectric Point (pI)

43.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_At4g14310 PF25465 615 - 726 1.1e-62 At4g14310 8-bladed propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 976
Acc16I TGCGCA 1 cut(s) 2301
Acc36I ACCTGC 1 cut(s) 976
Acc65I GGTACC 1 cut(s) 1229
AccB1I GGYRCC 2 cut(s) 1229, 1289
AccB7I CCANNNNNTGG 1 cut(s) 2288
AccBSI CCGCTC 2 cut(s) 186, 358
AccI GTMKAC 1 cut(s) 168
AccII CGCG 2 cut(s) 202, 208
AccIII TCCGGA 1 cut(s) 123
AclWI GGATC 5 cut(s) 75, 324, 682, 1835, 1848
AcsI RAATTY 1 cut(s) 529
AcuI CTGAAG 1 cut(s) 2564
AcvI CACGTG 1 cut(s) 164
AcyI GRCGYC 1 cut(s) 954
AfaI GTAC 4 cut(s) 1231, 1577, 1737, 2221
AfeI AGCGCT 1 cut(s) 40
AflIII ACRYGT 1 cut(s) 163
AhlI ACTAGT 1 cut(s) 635
AjnI CCWGG 1 cut(s) 1197
AleI CACNNNNGTG 1 cut(s) 1295
AloI GAACNNNNNNTCC 2 cut(s) 1491, 1523
Alw21I GWGCWC 3 cut(s) 248, 1636, 2662
Alw26I GTCTC 2 cut(s) 49, 1094
AlwI GGATC 5 cut(s) 75, 324, 682, 1835, 1848
Ama87I CYCGRG 1 cut(s) 1654
Aor13HI TCCGGA 1 cut(s) 123
Aor51HI AGCGCT 1 cut(s) 40
AoxI GGCC 9 cut(s) 6, 113, 132, 152, 290, 894, 1459, 1786, 2611
ApaI GGGCCC 1 cut(s) 117
ApeKI GCWGC 1 cut(s) 2340
ApoI RAATTY 1 cut(s) 529
ArsI GACNNNNNNTTYG 2 cut(s) 2339, 2371
Asp718I GGTACC 1 cut(s) 1229
AspLEI GCGC 4 cut(s) 41, 202, 208, 2302
AsuC2I CCSGG 2 cut(s) 111, 348
AsuHPI GGTGA 7 cut(s) 790, 862, 1000, 1318, 1590, 2068, 2560
AsuII TTCGAA 2 cut(s) 458, 2404
AvaI CYCGRG 1 cut(s) 1654
AvaII GGWCC 5 cut(s) 53, 126, 332, 555, 1877
BaeGI GKGCMC 3 cut(s) 117, 978, 1166
BamHI GGATCC 1 cut(s) 1840
BanI GGYRCC 2 cut(s) 1229, 1289
BanII GRGCYC 4 cut(s) 117, 248, 1636, 2526
BarI GAAGNNNNNNTAC 2 cut(s) 616, 648
BauI CACGAG 2 cut(s) 2316, 2655
BbrPI CACGTG 1 cut(s) 164
BbsI GAAGAC 1 cut(s) 812
Bbv12I GWGCWC 3 cut(s) 248, 1636, 2662
BbvCI CCTCAGC 1 cut(s) 1560
BbvI GCAGC 1 cut(s) 2327
BcgI CGANNNNNNTGC 2 cut(s) 185, 219
BciT130I CCWGG 1 cut(s) 1199
BciVI GTATCC 1 cut(s) 1423
BclI TGATCA 1 cut(s) 1407
BcnI CCSGG 2 cut(s) 111, 348
BcoDI GTCTC 2 cut(s) 49, 1094
BcuI ACTAGT 1 cut(s) 635
BfaI CTAG 9 cut(s) 249, 429, 636, 738, 1041, 1224, 1434, 1638, 2243
BfmI CTRYAG 3 cut(s) 504, 1167, 1587
BfoI RGCGCY 1 cut(s) 42
BfuAI ACCTGC 1 cut(s) 976
BfuI GTATCC 1 cut(s) 1423
BglI GCCNNNNNGGC 1 cut(s) 14
BisI GCNGC 8 cut(s) 22, 152, 177, 180, 187, 231, 1674, 2341
BlsI GCNGC 8 cut(s) 23, 153, 178, 181, 188, 232, 1675, 2342
Bme1390I CCNGG 3 cut(s) 111, 348, 1199
Bme18I GGWCC 5 cut(s) 53, 126, 332, 555, 1877
BmeT110I CYCGRG 1 cut(s) 1654
BmiI GGNNCC 8 cut(s) 55, 114, 115, 333, 1231, 1291, 1789, 1842
BmrFI CCNGG 3 cut(s) 111, 348, 1199
BmsI GCATC 4 cut(s) 829, 1100, 1685, 2527
BpiI GAAGAC 1 cut(s) 812
Bpu10I CCTNAGC 1 cut(s) 1560
Bpu14I TTCGAA 2 cut(s) 458, 2404
BpuEI CTTGAG 2 cut(s) 1092, 2460
BpuMI CCSGG 2 cut(s) 111, 348
BsaAI YACGTR 2 cut(s) 164, 1739
BsaBI GATNNNNATC 2 cut(s) 1344, 2507
BsaHI GRCGYC 1 cut(s) 954
BsaI GGTCTC 1 cut(s) 1094
BsaJI CCNNGG 6 cut(s) 110, 129, 225, 897, 1206, 2335
BsaWI WCCGGW 1 cut(s) 123
BsaXI ACNNNNNCTCC 4 cut(s) 1491, 1521, 1603, 1633
Bse118I RCCGGY 1 cut(s) 1328
Bse1I ACTGG 3 cut(s) 1128, 1480, 2571
Bse8I GATNNNNATC 2 cut(s) 1344, 2507
BseAI TCCGGA 1 cut(s) 123
BseBI CCWGG 1 cut(s) 1199
BseDI CCNNGG 6 cut(s) 110, 129, 225, 897, 1206, 2335
BseGI GGATG 6 cut(s) 1153, 1246, 1966, 2068, 2366, 2554
BseJI GATNNNNATC 2 cut(s) 1344, 2507
BseMII CTCAG 7 cut(s) 249, 1089, 1416, 1485, 1551, 2603, 2661
BseNI ACTGG 3 cut(s) 1128, 1480, 2571
BseRI GAGGAG 1 cut(s) 1043
BseSI GKGCMC 3 cut(s) 117, 978, 1166
BseXI GCAGC 1 cut(s) 2327
BseYI CCCAGC 2 cut(s) 86, 2683
BsgI GTGCAG 1 cut(s) 1662
Bsh1236I CGCG 2 cut(s) 202, 208
Bsh1285I CGRYCG 2 cut(s) 362, 718
BshFI GGCC 9 cut(s) 8, 115, 134, 154, 292, 896, 1461, 1788, 2613
BshNI GGYRCC 2 cut(s) 1229, 1289
BsiEI CGRYCG 2 cut(s) 362, 718
BsiHKAI GWGCWC 3 cut(s) 248, 1636, 2662
BsiHKCI CYCGRG 1 cut(s) 1654
BsiSI CCGG 6 cut(s) 51, 71, 110, 124, 347, 1329
BslFI GGGAC 1 cut(s) 1949
BsmAI GTCTC 2 cut(s) 49, 1094
BsmFI GGGAC 1 cut(s) 1949
BsmI GAATGC 1 cut(s) 733
BsnI GGCC 9 cut(s) 8, 115, 134, 154, 292, 896, 1461, 1788, 2613
Bso31I GGTCTC 1 cut(s) 1094
BsoBI CYCGRG 1 cut(s) 1654
Bsp119I TTCGAA 2 cut(s) 458, 2404
Bsp120I GGGCCC 1 cut(s) 113
Bsp1286I GDGCHC 7 cut(s) 117, 248, 978, 1166, 1636, 2526, 2662
Bsp13I TCCGGA 1 cut(s) 123
Bsp1407I TGTACA 1 cut(s) 1575
Bsp143I GATC 8 cut(s) 80, 316, 674, 1345, 1407, 1840, 2596, 2677
Bsp19I CCATGG 1 cut(s) 897
BspANI GGCC 9 cut(s) 8, 115, 134, 154, 292, 896, 1461, 1788, 2613
BspCNI CTCAG 7 cut(s) 250, 1090, 1417, 1486, 1552, 2602, 2660
BspEI TCCGGA 1 cut(s) 123
BspFNI CGCG 2 cut(s) 202, 208
BspHI TCATGA 1 cut(s) 748
BspLI GGNNCC 8 cut(s) 55, 114, 115, 333, 1231, 1291, 1789, 1842
BspMAI CTGCAG 1 cut(s) 1591
BspMI ACCTGC 1 cut(s) 976
BspPI GGATC 5 cut(s) 75, 324, 682, 1835, 1848
BspQI GCTCTTC 1 cut(s) 2133
BspT104I TTCGAA 2 cut(s) 458, 2404
BspT107I GGYRCC 2 cut(s) 1229, 1289
BspTNI GGTCTC 1 cut(s) 1094
BsrBI CCGCTC 2 cut(s) 186, 358
BsrFI RCCGGY 1 cut(s) 1328
BsrGI TGTACA 1 cut(s) 1575
BsrI ACTGG 3 cut(s) 1128, 1480, 2571
BssAI RCCGGY 1 cut(s) 1328
BssECI CCNNGG 6 cut(s) 110, 129, 225, 897, 1206, 2335
BssMI GATC 8 cut(s) 80, 316, 674, 1345, 1407, 1840, 2596, 2677
BssNI GRCGYC 1 cut(s) 954
BssSI CACGAG 2 cut(s) 2316, 2655
BssT1I CCWWGG 3 cut(s) 897, 1206, 2335
Bst2BI CACGAG 2 cut(s) 2316, 2655
Bst2UI CCWGG 1 cut(s) 1199
Bst4CI ACNGT 7 cut(s) 1025, 1047, 1144, 1297, 1780, 2373, 2394
Bst6I CTCTTC 4 cut(s) 776, 995, 2133, 2383
BstACI GRCGYC 1 cut(s) 954
BstAUI TGTACA 1 cut(s) 1575
BstBAI YACGTR 2 cut(s) 164, 1739
BstBI TTCGAA 2 cut(s) 458, 2404
BstC8I GCNNGC 6 cut(s) 19, 184, 204, 759, 1275, 1334
BstDEI CTNAG 8 cut(s) 258, 810, 1098, 1425, 1494, 1560, 2589, 2647
BstDSI CCRYGG 2 cut(s) 225, 897
BstEII GGTNACC 1 cut(s) 1324
BstENI CCTNNNNNAGG 1 cut(s) 1587
BstF5I GGATG 6 cut(s) 1153, 1246, 1966, 2068, 2366, 2554
BstFNI CGCG 2 cut(s) 202, 208
BstH2I RGCGCY 1 cut(s) 42
BstHHI GCGC 4 cut(s) 41, 202, 208, 2302
BstKTI GATC 8 cut(s) 83, 319, 677, 1348, 1410, 1843, 2599, 2680
BstMAI GTCTC 2 cut(s) 49, 1094
BstMBI GATC 8 cut(s) 80, 316, 674, 1345, 1407, 1840, 2596, 2677
BstMCI CGRYCG 2 cut(s) 362, 718
BstMWI GCNNNNNNNGC 9 cut(s) 14, 47, 148, 192, 982, 1088, 1640, 1679, 2169
BstNI CCWGG 1 cut(s) 1199
BstNSI RCATGY 1 cut(s) 908
BstPI GGTNACC 1 cut(s) 1324
BstSCI CCNGG 3 cut(s) 109, 346, 1197
BstSFI CTRYAG 3 cut(s) 504, 1167, 1587
BstSLI GKGCMC 3 cut(s) 117, 978, 1166
BstUI CGCG 2 cut(s) 202, 208
BstV1I GCAGC 1 cut(s) 2327
BstV2I GAAGAC 1 cut(s) 812
BstX2I RGATCY 2 cut(s) 80, 1840
BstXI CCANNNNNNTGG 2 cut(s) 1451, 2691
BstYI RGATCY 2 cut(s) 80, 1840
BsuI GTATCC 1 cut(s) 1423
BsuRI GGCC 9 cut(s) 8, 115, 134, 154, 292, 896, 1461, 1788, 2613
BtgI CCRYGG 2 cut(s) 225, 897
BtgZI GCGATG 1 cut(s) 1097
BtsCI GGATG 6 cut(s) 1153, 1246, 1966, 2068, 2366, 2554
BtsI GCAGTG 1 cut(s) 2012
BtsIMutI CAGTG 6 cut(s) 1149, 1293, 1785, 2012, 2142, 2578
BveI ACCTGC 1 cut(s) 976
Cac8I GCNNGC 6 cut(s) 19, 184, 204, 759, 1275, 1334
CciI TCATGA 1 cut(s) 748
CfoI GCGC 4 cut(s) 41, 202, 208, 2302
Cfr10I RCCGGY 1 cut(s) 1328
CseI GACGC 5 cut(s) 79, 264, 780, 831, 962
Csp6I GTAC 4 cut(s) 1230, 1576, 1736, 2220
CspCI CAANNNNNGTGG 2 cut(s) 1841, 1876
CviAII CATG 7 cut(s) 148, 749, 898, 905, 1337, 1533, 2132
CviQI GTAC 4 cut(s) 1230, 1576, 1736, 2220
DdeI CTNAG 8 cut(s) 258, 810, 1098, 1425, 1494, 1560, 2589, 2647
DpnI GATC 8 cut(s) 82, 318, 676, 1347, 1409, 1842, 2598, 2679
DpnII GATC 8 cut(s) 80, 316, 674, 1345, 1407, 1840, 2596, 2677
Eam1104I CTCTTC 4 cut(s) 776, 995, 2133, 2383
EarI CTCTTC 4 cut(s) 776, 995, 2133, 2383
EciI GGCGGA 3 cut(s) 37, 204, 2178
Ecl136II GAGCTC 2 cut(s) 246, 1634
Eco130I CCWWGG 3 cut(s) 897, 1206, 2335
Eco24I GRGCYC 4 cut(s) 117, 248, 1636, 2526
Eco31I GGTCTC 1 cut(s) 1094
Eco47I GGWCC 5 cut(s) 53, 126, 332, 555, 1877
Eco47III AGCGCT 1 cut(s) 40
Eco53kI GAGCTC 2 cut(s) 246, 1634
Eco57I CTGAAG 1 cut(s) 2564
Eco72I CACGTG 1 cut(s) 164
Eco88I CYCGRG 1 cut(s) 1654
Eco91I GGTNACC 1 cut(s) 1324
EcoICRI GAGCTC 2 cut(s) 246, 1634
EcoNI CCTNNNNNAGG 1 cut(s) 1587
EcoO109I RGGNCCY 1 cut(s) 113
EcoO65I GGTNACC 1 cut(s) 1324
EcoRII CCWGG 1 cut(s) 1197
EcoT14I CCWWGG 3 cut(s) 897, 1206, 2335
EcoT38I GRGCYC 4 cut(s) 117, 248, 1636, 2526
ErhI CCWWGG 3 cut(s) 897, 1206, 2335
FaeI CATG 7 cut(s) 151, 752, 901, 908, 1340, 1536, 2135
FalI AAGNNNNNCTT 4 cut(s) 1807, 1839, 1961, 1993
FaqI GGGAC 1 cut(s) 1949
FatI CATG 7 cut(s) 147, 748, 897, 904, 1336, 1532, 2131
FauI CCCGC 2 cut(s) 297, 364
FbaI TGATCA 1 cut(s) 1407
FblI GTMKAC 1 cut(s) 168
Fnu4HI GCNGC 8 cut(s) 22, 152, 177, 180, 187, 231, 1674, 2341
FokI GGATG 6 cut(s) 1160, 1253, 1973, 2075, 2373, 2561
FriOI GRGCYC 4 cut(s) 117, 248, 1636, 2526
Fsp4HI GCNGC 8 cut(s) 22, 152, 177, 180, 187, 231, 1674, 2341
FspBI CTAG 9 cut(s) 249, 429, 636, 738, 1041, 1224, 1434, 1638, 2243
FspI TGCGCA 1 cut(s) 2301
GlaI GCGC 4 cut(s) 40, 201, 207, 2301
GluI GCNGC 8 cut(s) 22, 152, 177, 180, 187, 231, 1674, 2341
GsaI CCCAGC 2 cut(s) 90, 2687
HaeII RGCGCY 1 cut(s) 42
HaeIII GGCC 9 cut(s) 8, 115, 134, 154, 292, 896, 1461, 1788, 2613
HapII CCGG 6 cut(s) 51, 71, 110, 124, 347, 1329
HgaI GACGC 5 cut(s) 79, 264, 780, 831, 962
HhaI GCGC 4 cut(s) 41, 202, 208, 2302
Hin1I GRCGYC 1 cut(s) 954
Hin1II CATG 7 cut(s) 151, 752, 901, 908, 1340, 1536, 2135
Hin6I GCGC 4 cut(s) 39, 200, 206, 2300
HinP1I GCGC 4 cut(s) 39, 200, 206, 2300
HincII GTYRAC 2 cut(s) 169, 1893
HindII GTYRAC 2 cut(s) 169, 1893
HindIII AAGCTT 3 cut(s) 743, 755, 2285
HpaII CCGG 6 cut(s) 51, 71, 110, 124, 347, 1329
HphI GGTGA 7 cut(s) 790, 862, 1000, 1318, 1590, 2068, 2560
Hpy166II GTNNAC 5 cut(s) 169, 1555, 1877, 1893, 2068
Hpy8I GTNNAC 5 cut(s) 169, 1555, 1877, 1893, 2068
Hpy99I CGWCG 5 cut(s) 95, 280, 290, 796, 847
HpyCH4III ACNGT 7 cut(s) 1025, 1047, 1144, 1297, 1780, 2373, 2394
HpyCH4IV ACGT 3 cut(s) 163, 285, 1738
HpyCH4V TGCA 7 cut(s) 904, 1273, 1536, 1589, 1643, 2005, 2389
HpyF10VI GCNNNNNNNGC 9 cut(s) 14, 47, 148, 192, 982, 1088, 1640, 1679, 2169
HpyF3I CTNAG 8 cut(s) 258, 810, 1098, 1425, 1494, 1560, 2589, 2647
HpySE526I ACGT 3 cut(s) 163, 285, 1738
Hsp92I GRCGYC 1 cut(s) 954
Hsp92II CATG 7 cut(s) 151, 752, 901, 908, 1340, 1536, 2135
HspAI GCGC 4 cut(s) 39, 200, 206, 2300
Kpn2I TCCGGA 1 cut(s) 123
KpnI GGTACC 1 cut(s) 1233
Ksp22I TGATCA 1 cut(s) 1407
Kzo9I GATC 8 cut(s) 80, 316, 674, 1345, 1407, 1840, 2596, 2677
LguI GCTCTTC 1 cut(s) 2133
LmnI GCTCC 6 cut(s) 36, 243, 355, 1639, 1942, 2635
Lsp1109I GCAGC 1 cut(s) 2327
LweI GCATC 4 cut(s) 829, 1100, 1685, 2527
MaeI CTAG 9 cut(s) 249, 429, 636, 738, 1041, 1224, 1434, 1638, 2243
MaeII ACGT 3 cut(s) 163, 285, 1738
MaeIII GTNAC 3 cut(s) 941, 1324, 2293
MalI GATC 8 cut(s) 82, 318, 676, 1347, 1409, 1842, 2598, 2679
MbiI CCGCTC 2 cut(s) 186, 358
MboI GATC 8 cut(s) 80, 316, 674, 1345, 1407, 1840, 2596, 2677
MfeI CAATTG 1 cut(s) 434
MflI RGATCY 2 cut(s) 80, 1840
MhlI GDGCHC 7 cut(s) 117, 248, 978, 1166, 1636, 2526, 2662
MluCI AATT 9 cut(s) 434, 462, 477, 529, 559, 1065, 1136, 1990, 2400
MlyI GAGTC 3 cut(s) 346, 1511, 2645
MmeI TCCRAC 2 cut(s) 774, 1601
MroI TCCGGA 1 cut(s) 123
MseI TTAA 4 cut(s) 423, 1011, 1064, 1979
MslI CAYNNNNRTG 4 cut(s) 1082, 1295, 1524, 1752
MspI CCGG 6 cut(s) 51, 71, 110, 124, 347, 1329
MspR9I CCNGG 3 cut(s) 111, 348, 1199
MunI CAATTG 1 cut(s) 434
Mva1269I GAATGC 1 cut(s) 733
MvaI CCWGG 1 cut(s) 1199
MvnI CGCG 2 cut(s) 202, 208
MwoI GCNNNNNNNGC 9 cut(s) 14, 47, 148, 192, 982, 1088, 1640, 1679, 2169
NciI CCSGG 2 cut(s) 111, 348
NcoI CCATGG 1 cut(s) 897
NdeII GATC 8 cut(s) 80, 316, 674, 1345, 1407, 1840, 2596, 2677
NlaIII CATG 7 cut(s) 151, 752, 901, 908, 1340, 1536, 2135
NlaIV GGNNCC 8 cut(s) 55, 114, 115, 333, 1231, 1291, 1789, 1842
NmeAIII GCCGAG 1 cut(s) 110
NmuCI GTSAC 1 cut(s) 1324
NsbI TGCGCA 1 cut(s) 2301
NspI RCATGY 1 cut(s) 908
NspV TTCGAA 2 cut(s) 458, 2404
OliI CACNNNNGTG 1 cut(s) 1295
PagI TCATGA 1 cut(s) 748
PaqCI CACCTGC 1 cut(s) 976
PciSI GCTCTTC 1 cut(s) 2133
PctI GAATGC 1 cut(s) 733
PflMI CCANNNNNTGG 1 cut(s) 2288
PkrI GCNGC 8 cut(s) 23, 153, 178, 181, 188, 232, 1675, 2342
PleI GAGTC 3 cut(s) 345, 1510, 2645
PmaCI CACGTG 1 cut(s) 164
PmlI CACGTG 1 cut(s) 164
PpsI GAGTC 3 cut(s) 345, 1510, 2645
Ppu21I YACGTR 2 cut(s) 164, 1739
Psp124BI GAGCTC 2 cut(s) 248, 1636
Psp6I CCWGG 1 cut(s) 1197
PspCI CACGTG 1 cut(s) 164
PspEI GGTNACC 1 cut(s) 1324
PspFI CCCAGC 2 cut(s) 86, 2683
PspGI CCWGG 1 cut(s) 1197
PspN4I GGNNCC 8 cut(s) 55, 114, 115, 333, 1231, 1291, 1789, 1842
PspOMI GGGCCC 1 cut(s) 113
PstI CTGCAG 1 cut(s) 1591
PsuI RGATCY 2 cut(s) 80, 1840
RsaI GTAC 4 cut(s) 1231, 1577, 1737, 2221
RsaNI GTAC 4 cut(s) 1230, 1576, 1736, 2220
RseI CAYNNNNRTG 4 cut(s) 1082, 1295, 1524, 1752
SacI GAGCTC 2 cut(s) 248, 1636
SalI GTCGAC 1 cut(s) 167
SapI GCTCTTC 1 cut(s) 2133
SaqAI TTAA 4 cut(s) 423, 1011, 1064, 1979
SatI GCNGC 8 cut(s) 22, 152, 177, 180, 187, 231, 1674, 2341
Sau3AI GATC 8 cut(s) 80, 316, 674, 1345, 1407, 1840, 2596, 2677
SbfI CCTGCAGG 1 cut(s) 1591
SchI GAGTC 3 cut(s) 346, 1511, 2645
ScrFI CCNGG 3 cut(s) 111, 348, 1199
SdaI CCTGCAGG 1 cut(s) 1591
SduI GDGCHC 7 cut(s) 117, 248, 978, 1166, 1636, 2526, 2662
SfaNI GCATC 4 cut(s) 829, 1100, 1685, 2527
SfcI CTRYAG 3 cut(s) 504, 1167, 1587
SfuI TTCGAA 2 cut(s) 458, 2404
SinI GGWCC 5 cut(s) 53, 126, 332, 555, 1877
SmiMI CAYNNNNRTG 4 cut(s) 1082, 1295, 1524, 1752
SmlI CTYRAG 2 cut(s) 1107, 2475
SmoI CTYRAG 2 cut(s) 1107, 2475
SpeI ACTAGT 1 cut(s) 635
Sse8387I CCTGCAGG 1 cut(s) 1591
Sse9I AATT 9 cut(s) 434, 462, 477, 529, 559, 1065, 1136, 1990, 2400
SspMI CTAG 9 cut(s) 249, 429, 636, 738, 1041, 1224, 1434, 1638, 2243
SstI GAGCTC 2 cut(s) 248, 1636
StyD4I CCNGG 3 cut(s) 109, 346, 1197
StyI CCWWGG 3 cut(s) 897, 1206, 2335
TaaI ACNGT 7 cut(s) 1025, 1047, 1144, 1297, 1780, 2373, 2394
TaiI ACGT 3 cut(s) 166, 288, 1741
TaqI TCGA 8 cut(s) 168, 324, 458, 677, 718, 845, 2404, 2420
TasI AATT 9 cut(s) 434, 462, 477, 529, 559, 1065, 1136, 1990, 2400
TatI WGTACW 1 cut(s) 1575
TauI GCSGC 7 cut(s) 24, 154, 179, 182, 189, 233, 1676
Tru1I TTAA 4 cut(s) 423, 1011, 1064, 1979
Tru9I TTAA 4 cut(s) 423, 1011, 1064, 1979
TscAI CASTG 6 cut(s) 1149, 1300, 1785, 2012, 2149, 2578
TseFI GTSAC 1 cut(s) 1324
TseI GCWGC 1 cut(s) 2340
Tsp45I GTSAC 1 cut(s) 1324
TspDTI ATGAA 8 cut(s) 737, 842, 1100, 1380, 1434, 1521, 1967, 2120
TspGWI ACGGA 3 cut(s) 214, 2044, 2247
TspRI CASTG 6 cut(s) 1149, 1300, 1785, 2012, 2149, 2578
Van91I CCANNNNNTGG 1 cut(s) 2288
VpaK11BI GGWCC 5 cut(s) 53, 126, 332, 555, 1877
XagI CCTNNNNNAGG 1 cut(s) 1587
XapI RAATTY 1 cut(s) 529
XbaI TCTAGA 1 cut(s) 2242
XceI RCATGY 1 cut(s) 908
XcmI CCANNNNNNNNNTGG 1 cut(s) 1754
XmiI GTMKAC 1 cut(s) 168
XspI CTAG 9 cut(s) 249, 429, 636, 738, 1041, 1224, 1434, 1638, 2243
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.