Rh4DG048300
ERF Family

Transducin WD40 repeat-like superfamily protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4D
OG0007851
Physical Location & Seq
Forward (+)
7721452 .. 7724932
3481 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4DG048300.1

Sequence Viewer

Length: 2796 bp
ATGTCCGCCTTATCCGCTCGCCGCCTCAAAGACCGCGGCGGCGTCGCCGCACCCACCAAACCCGACAAGAGATCCTCCAGCGTCGGCAAAGAAAACCCGCCCGGGCCCACTTTCCGGACTTCGGCCCAGAAGCCCACCATGCGGCCCGTTCCACGTGTCGACAAGGCGTCCGTGGCGGCTAGCGGCGGTGGAGGCGGCGAAGCGCGCGCGCGGTGGTCCATGCCTTCTGTGGCGAAAGGTAGGAGCTCTAGCCCTTCTGGGTTTTTTAGGGTTGCCGCGTCGGGAAATGTTGGGCCGAAGAGTCGGAGGGTTTCGGCGGATCGGGTCGAGAGGGGTCCGAGTCCGGGTTCGGGTTTGGGCGAGAGGGAACGGTCCGGGAGTGCAGGGAGGAGTTTGAGTAGGGGAAGAGGATCAGGGGTTAGGGATTTGGAAGTCAAAGTTGGTCAATTGGGGGTTAGGGTTTTCAGGGATTTGAAAGATGATGGTAAAATTGGGGTGAAAAAGAATGGAACTTGTGGAGAACTGGAAGTGAAATCGGTGGAGATTGAGAAGAATTTGAGTGGGATTAGGTTTAGGGTTTTGGGCAGTTGTGATGGAGTAGCTAATTTGAAAAACCCAGATGGGGTTGATGGTAGGGTTTTGGAGAGATGCAATAGTGGAAAGAGTAGAAGTAGTGATATTGGGAATCGGGCTGGTTTGGGATTGAAGGAGTCGAGTGAGAAATGTGTGAGCAATGGGAAGGTTTTGGAGGGTTTGAAAGAGAAGGGGTTGAAGGAAGAGGGAAGTAATGGCGGTCGAGTTGGTATAAAACATCCTAGTAAGCTTCATGAGAAGCTTGCTTTCTTGGAAGGGAAGGTGAAGAGGATTGCGTCTGATATAAAGAAGACTAAGGAGATATTGGATATGAATAACCCAGATGCATCGAAGGTGATACTTTCTGATATTCAGGAAAAGATTACAGGGATTGAGAAGGCCATGGTACATGTTTCCAATGGCTCTGGTGGTAAGGTGTTGAAAGGTAATGAGCAGGATCACCAGGACGCCAAAGTGGTTGAGAACGGTCACATCGAGCAGGTGTGTAATGTGAAGAGTTCGGTAAAGGGTTTGGATCGTGAGGACTTGGAAGCTAGACTCTTTCCTCATCATAAGTTGATTAGAAACCGCACAGCCTTGAAAGCATCATCAGAAAGTTCTCAATGTCAAGTAGTTGAAACCAGTTGTGAATCAAAAGTGGATGAAAAGACAGTGTGCCTTATGGATGAGAACCCAATTGCTATAGAGTTTTTGGCTTCCTTGGATAATGAGCAAACTCAAGTTACAACAAGGGATGGACACGAGGATTTGGAAAATTGTGAGGTTCAAGCTGTGGATGGTGCCACCACTGCAGGAGTTGAAAAATCTTCAAAAATGGTCACTGGTAAGCAGGATGACGAGCTCATTCTCACAACTGATGAAACACTTGATGAGTCTGGTGATCAGGAGAATAGACAAGTGATCATTGATGAGGAAACTGAGGATACTAGCATTTACCAGCTCAATGGAATAGGTCAAAAGACGTCAACTGGTGGGTGGTTTATGTCTGAGGGAGAGTCAGTTCTTCTTGCTCATGATGATGGTTCGTGCACCTTCTATGATATTGTAAACTCCGAGGAAAAGGCTTTGTACAAGCCTCCTGCAGGAGTTTCACCTAATATGTGGAGAGATTGCTGGATCATCCGAGCTCCTAGTGCAGATGGTTGCTCAGGAAGGTATGTCGTGGCTGCATCTGCTGGAAACACAATGGATTCAGGTTTTTGCTCATGGGATTTTTATGCCAAAGATGTGTGTGCTTTCCATTTTGACGATGGTTTAGCCCCGTCAAGGACAGTACTTGGCCCCTTGCCCGACAACATCTCATACAGAAGAAACACTTTGTCTAATCTTTTGGATCCAGAAACTCAACAATGGTGGTATAGACCTTGCGGACCTCTTATTGTCTCATCTGCCACCTGTCAGAGAGTTGTGAGAATCTATGACATTCGTGACGGTGAGCAAGTTATGAAATGGGATGTGCCGAAGCCTGTGTTAACAATGGATAACTCAAGCCCCTTGCAGTGGAGAAACAGAGGAAAAGTTGTTGTAGCTGACATTGAAACAATTTCCATCTGGGATGTGAACTCTCTCAACCCTCAACCTTTATTATCTGTTTCTTCTGCTGGTCGGAAAATCTCTGCTCTTCATGTGAATAACACTGACTCTGAACTTGGTGGCGGAGTTCGCCAAAGGGTAAGTTCAGCAGAAGCAGAAGGAAATGATGGAGTGTTCTGTACCCAGGATTCAATAAACATTCTAGACTTTCGCAATCCGTCTGGTATAGGTCTGAAAATACCAAAGCTTGGTGTAACAGCACAGTCAGTTTTCTCTCGTGGAGATTCCATCTTCCTTGGCTGCCCCAATGGAAGGTCTGGATGGAAAAAACAGTCCTCTTCACAAGTGCAACAGTTTTCAATTCGAAAACAAAGGCTAATAAGCACTTACGCCTTGCCAGAATCAAATGCTCACAGCCATCACACAGCTATTACGCAAGTTTGGGGGAACTCAAACGTAGTCATGGGTGTTTGTGGATTGGGGCTGTTTGTGTTTGATGCCTTAAAGGATGACGGTGTGCCGTCTTTCACCAATGATAGTGGAAGCACTCAAAAAGATTGTGAAGTCATTGGCCCAGATGACTTGTATGCACCTTCTTTTGATTACATGGACTCTCGTGCTCTTATCATATCAAGAGATCGCCCAGCATTATGGAGGCACTTATCGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005618 GO:0005623 GO:0030312 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

931

Amino Acids

100.76

Weight (kDa)

6.95

Isoelectric Point (pI)

41.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_At4g14310 PF25465 644 - 926 5.6e-156 At4g14310 8-bladed propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1063
AatII GACGTC 1 cut(s) 1559
Acc36I ACCTGC 1 cut(s) 1063
AccB1I GGYRCC 1 cut(s) 1373
AccB7I CCANNNNNTGG 1 cut(s) 2375
AccBSI CCGCTC 1 cut(s) 17
AccI GTMKAC 1 cut(s) 159
AccII CGCG 6 cut(s) 36, 205, 207, 209, 211, 278
AccIII TCCGGA 1 cut(s) 114
AclWI GGATC 8 cut(s) 66, 327, 418, 1038, 1116, 1718, 1922, 1935
AcsI RAATTY 1 cut(s) 553
AcvI CACGTG 1 cut(s) 155
AcyI GRCGYC 4 cut(s) 42, 167, 1041, 1556
AfaI GTAC 4 cut(s) 981, 1664, 1869, 2308
AflIII ACRYGT 2 cut(s) 154, 982
AhdI GACNNNNNGTC 1 cut(s) 166
AjnI CCWGG 2 cut(s) 1035, 2310
AjuI GAANNNNNNNTTGG 2 cut(s) 423, 455
AloI GAACNNNNNNTCC 2 cut(s) 1578, 1610
Alw21I GWGCWC 5 cut(s) 248, 1437, 1625, 1723, 2749
Alw26I GTCTC 1 cut(s) 1981
Alw44I GTGCAC 1 cut(s) 1621
AlwI GGATC 8 cut(s) 66, 327, 418, 1038, 1116, 1718, 1922, 1935
Ama87I CYCGRG 1 cut(s) 101
Aor13HI TCCGGA 1 cut(s) 114
AoxI GGCC 7 cut(s) 104, 123, 143, 293, 972, 1873, 2698
ApaI GGGCCC 1 cut(s) 108
ApaLI GTGCAC 1 cut(s) 1621
ApeKI GCWGC 2 cut(s) 1760, 2427
ApoI RAATTY 1 cut(s) 553
AspLEI GCGC 4 cut(s) 205, 207, 209, 211
AsuC2I CCSGG 4 cut(s) 102, 103, 345, 376
AsuHPI GGTGA 8 cut(s) 508, 868, 940, 1025, 1484, 1677, 2039, 2647
AsuII TTCGAA 1 cut(s) 2491
AsuNHI GCTAGC 1 cut(s) 179
AvaI CYCGRG 1 cut(s) 101
AvaII GGWCC 4 cut(s) 216, 335, 372, 1964
BaeGI GKGCMC 2 cut(s) 108, 1625
BamHI GGATCC 1 cut(s) 1927
BanI GGYRCC 1 cut(s) 1373
BanII GRGCYC 4 cut(s) 108, 248, 1437, 1723
BauI CACGAG 3 cut(s) 1334, 2403, 2742
BbrPI CACGTG 1 cut(s) 155
BbsI GAAGAC 1 cut(s) 890
Bbv12I GWGCWC 5 cut(s) 248, 1437, 1625, 1723, 2749
BbvI GCAGC 2 cut(s) 1747, 2414
BceAI ACGGC 1 cut(s) 2632
BciT130I CCWGG 2 cut(s) 1037, 2312
BciVI GTATCC 1 cut(s) 1510
BclI TGATCA 2 cut(s) 1474, 1494
BcnI CCSGG 4 cut(s) 102, 103, 345, 376
BcoDI GTCTC 1 cut(s) 1981
BfaI CTAG 7 cut(s) 180, 249, 816, 1128, 1521, 1725, 2330
BfmI CTRYAG 3 cut(s) 1275, 1383, 1674
BfuAI ACCTGC 1 cut(s) 1063
BfuI GTATCC 1 cut(s) 1510
BmcAI AGTACT 1 cut(s) 1869
Bme1390I CCNGG 6 cut(s) 102, 103, 345, 376, 1037, 2312
Bme18I GGWCC 4 cut(s) 216, 335, 372, 1964
BmeRI GACNNNNNGTC 1 cut(s) 166
BmeT110I CYCGRG 1 cut(s) 101
BmiI GGNNCC 5 cut(s) 106, 336, 1375, 1876, 1929
BmrFI CCNGG 6 cut(s) 102, 103, 345, 376, 1037, 2312
BmsI GCATC 6 cut(s) 638, 907, 929, 1187, 1772, 2614
BmtI GCTAGC 1 cut(s) 183
BpiI GAAGAC 1 cut(s) 890
BpmI CTGGAG 1 cut(s) 61
Bpu10I CCTNAGC 1 cut(s) 1741
Bpu14I TTCGAA 1 cut(s) 2491
BpuEI CTTGAG 2 cut(s) 1296, 2065
BpuMI CCSGG 4 cut(s) 102, 103, 345, 376
BsaAI YACGTR 1 cut(s) 155
BsaHI GRCGYC 4 cut(s) 42, 167, 1041, 1556
BsaJI CCNNGG 8 cut(s) 34, 101, 171, 975, 1293, 1647, 2310, 2422
BsaWI WCCGGW 1 cut(s) 114
BsaXI ACNNNNNCTCC 4 cut(s) 382, 412, 1578, 1608
Bse1I ACTGG 4 cut(s) 528, 1215, 1420, 1567
Bse3DI GCAATG 1 cut(s) 739
BseAI TCCGGA 1 cut(s) 114
BseBI CCWGG 2 cut(s) 1037, 2312
BseDI CCNNGG 8 cut(s) 34, 101, 171, 975, 1293, 1647, 2310, 2422
BseMI GCAATG 1 cut(s) 739
BseMII CTCAG 3 cut(s) 1503, 1572, 1755
BseNI ACTGG 4 cut(s) 528, 1215, 1420, 1567
BsePI GCGCGC 3 cut(s) 203, 205, 207
BseRI GAGGAG 1 cut(s) 403
BseSI GKGCMC 2 cut(s) 108, 1625
BseXI GCAGC 2 cut(s) 1747, 2414
BseYI CCCAGC 1 cut(s) 2770
BsgI GTGCAG 2 cut(s) 402, 1749
Bsh1236I CGCG 6 cut(s) 36, 205, 207, 209, 211, 278
Bsh1285I CGRYCG 1 cut(s) 796
BshFI GGCC 7 cut(s) 106, 125, 145, 295, 974, 1875, 2700
BshNI GGYRCC 1 cut(s) 1373
BsiEI CGRYCG 1 cut(s) 796
BsiHKAI GWGCWC 5 cut(s) 248, 1437, 1625, 1723, 2749
BsiHKCI CYCGRG 1 cut(s) 101
BsiSI CCGG 4 cut(s) 102, 115, 344, 375
BsmAI GTCTC 1 cut(s) 1981
BsnI GGCC 7 cut(s) 106, 125, 145, 295, 974, 1875, 2700
BsoBI CYCGRG 1 cut(s) 101
Bsp119I TTCGAA 1 cut(s) 2491
Bsp120I GGGCCC 1 cut(s) 104
Bsp1286I GDGCHC 6 cut(s) 108, 248, 1437, 1625, 1723, 2749
Bsp13I TCCGGA 1 cut(s) 114
Bsp1407I TGTACA 1 cut(s) 1662
Bsp19I CCATGG 1 cut(s) 975
BspANI GGCC 7 cut(s) 106, 125, 145, 295, 974, 1875, 2700
BspCNI CTCAG 3 cut(s) 1504, 1573, 1754
BspEI TCCGGA 1 cut(s) 114
BspFNI CGCG 6 cut(s) 36, 205, 207, 209, 211, 278
BspHI TCATGA 2 cut(s) 826, 1606
BspLI GGNNCC 5 cut(s) 106, 336, 1375, 1876, 1929
BspMAI CTGCAG 2 cut(s) 1387, 1678
BspMI ACCTGC 1 cut(s) 1063
BspOI GCTAGC 1 cut(s) 183
BspPI GGATC 8 cut(s) 66, 327, 418, 1038, 1116, 1718, 1922, 1935
BspQI GCTCTTC 1 cut(s) 2220
BspT104I TTCGAA 1 cut(s) 2491
BspT107I GGYRCC 1 cut(s) 1373
BsrBI CCGCTC 1 cut(s) 17
BsrDI GCAATG 1 cut(s) 739
BsrGI TGTACA 1 cut(s) 1662
BsrI ACTGG 4 cut(s) 528, 1215, 1420, 1567
BssECI CCNNGG 8 cut(s) 34, 101, 171, 975, 1293, 1647, 2310, 2422
BssHII GCGCGC 3 cut(s) 203, 205, 207
BssNI GRCGYC 4 cut(s) 42, 167, 1041, 1556
BssSI CACGAG 3 cut(s) 1334, 2403, 2742
BssT1I CCWWGG 3 cut(s) 975, 1293, 2422
Bst2BI CACGAG 3 cut(s) 1334, 2403, 2742
Bst2UI CCWGG 2 cut(s) 1037, 2312
Bst4CI ACNGT 9 cut(s) 372, 1061, 1246, 1867, 2027, 2391, 2460, 2481, 2642
Bst6I CTCTTC 7 cut(s) 293, 400, 771, 854, 1082, 2220, 2470
BstACI GRCGYC 4 cut(s) 42, 167, 1041, 1556
BstAUI TGTACA 1 cut(s) 1662
BstBAI YACGTR 1 cut(s) 155
BstBI TTCGAA 1 cut(s) 2491
BstC8I GCNNGC 6 cut(s) 19, 181, 205, 207, 209, 837
BstDEI CTNAG 4 cut(s) 888, 1512, 1581, 1741
BstDSI CCRYGG 3 cut(s) 34, 171, 975
BstENI CCTNNNNNAGG 1 cut(s) 1674
BstFNI CGCG 6 cut(s) 36, 205, 207, 209, 211, 278
BstHHI GCGC 4 cut(s) 205, 207, 209, 211
BstMAI GTCTC 1 cut(s) 1981
BstMCI CGRYCG 1 cut(s) 796
BstNI CCWGG 2 cut(s) 1037, 2312
BstNSI RCATGY 1 cut(s) 986
BstSCI CCNGG 6 cut(s) 100, 101, 343, 374, 1035, 2310
BstSFI CTRYAG 3 cut(s) 1275, 1383, 1674
BstSLI GKGCMC 2 cut(s) 108, 1625
BstUI CGCG 6 cut(s) 36, 205, 207, 209, 211, 278
BstV1I GCAGC 2 cut(s) 1747, 2414
BstV2I GAAGAC 1 cut(s) 890
BstX2I RGATCY 2 cut(s) 71, 1927
BstXI CCANNNNNNTGG 2 cut(s) 1538, 2778
BstYI RGATCY 2 cut(s) 71, 1927
BsuI GTATCC 1 cut(s) 1510
BsuRI GGCC 7 cut(s) 106, 125, 145, 295, 974, 1875, 2700
BtgI CCRYGG 3 cut(s) 34, 171, 975
BtsI GCAGTG 2 cut(s) 1380, 2099
BtsIMutI CAGTG 5 cut(s) 1251, 1380, 1413, 2099, 2229
BveI ACCTGC 1 cut(s) 1063
Cac8I GCNNGC 6 cut(s) 19, 181, 205, 207, 209, 837
CciI TCATGA 2 cut(s) 826, 1606
CfoI GCGC 4 cut(s) 205, 207, 209, 211
Cfr42I CCGCGG 1 cut(s) 37
Cfr9I CCCGGG 1 cut(s) 101
CpoI CGGWCCG 1 cut(s) 372
CseI GACGC 6 cut(s) 31, 70, 156, 267, 858, 1049
Csp6I GTAC 4 cut(s) 980, 1663, 1868, 2307
CspCI CAANNNNNGTGG 4 cut(s) 1928, 1963, 2647, 2682
CspI CGGWCCG 1 cut(s) 372
CviQI GTAC 4 cut(s) 980, 1663, 1868, 2307
DdeI CTNAG 4 cut(s) 888, 1512, 1581, 1741
DriI GACNNNNNGTC 1 cut(s) 166
Eam1104I CTCTTC 7 cut(s) 293, 400, 771, 854, 1082, 2220, 2470
Eam1105I GACNNNNNGTC 1 cut(s) 166
EarI CTCTTC 7 cut(s) 293, 400, 771, 854, 1082, 2220, 2470
EciI GGCGGA 2 cut(s) 332, 2265
Ecl136II GAGCTC 3 cut(s) 246, 1435, 1721
Eco130I CCWWGG 3 cut(s) 975, 1293, 2422
Eco24I GRGCYC 4 cut(s) 108, 248, 1437, 1723
Eco47I GGWCC 4 cut(s) 216, 335, 372, 1964
Eco53kI GAGCTC 3 cut(s) 246, 1435, 1721
Eco72I CACGTG 1 cut(s) 155
Eco88I CYCGRG 1 cut(s) 101
EcoICRI GAGCTC 3 cut(s) 246, 1435, 1721
EcoNI CCTNNNNNAGG 1 cut(s) 1674
EcoRII CCWGG 2 cut(s) 1035, 2310
EcoT14I CCWWGG 3 cut(s) 975, 1293, 2422
EcoT22I ATGCAT 1 cut(s) 922
EcoT38I GRGCYC 4 cut(s) 108, 248, 1437, 1723
ErhI CCWWGG 3 cut(s) 975, 1293, 2422
FalI AAGNNNNNCTT 2 cut(s) 1894, 1926
FauI CCCGC 1 cut(s) 105
FbaI TGATCA 2 cut(s) 1474, 1494
FblI GTMKAC 1 cut(s) 159
FriOI GRGCYC 4 cut(s) 108, 248, 1437, 1723
FspBI CTAG 7 cut(s) 180, 249, 816, 1128, 1521, 1725, 2330
GlaI GCGC 4 cut(s) 204, 206, 208, 210
GsaI CCCAGC 1 cut(s) 2774
GsuI CTGGAG 1 cut(s) 61
HaeIII GGCC 7 cut(s) 106, 125, 145, 295, 974, 1875, 2700
HapII CCGG 4 cut(s) 102, 115, 344, 375
HgaI GACGC 6 cut(s) 31, 70, 156, 267, 858, 1049
HhaI GCGC 4 cut(s) 205, 207, 209, 211
Hin1I GRCGYC 4 cut(s) 42, 167, 1041, 1556
Hin6I GCGC 4 cut(s) 203, 205, 207, 209
HinP1I GCGC 4 cut(s) 203, 205, 207, 209
HincII GTYRAC 3 cut(s) 160, 1560, 2067
HindII GTYRAC 3 cut(s) 160, 1560, 2067
HindIII AAGCTT 3 cut(s) 821, 833, 2372
HpaI GTTAAC 1 cut(s) 2067
HpaII CCGG 4 cut(s) 102, 115, 344, 375
HphI GGTGA 8 cut(s) 508, 868, 940, 1025, 1484, 1677, 2039, 2647
Hpy166II GTNNAC 6 cut(s) 160, 1560, 1623, 1642, 2067, 2155
Hpy8I GTNNAC 6 cut(s) 160, 1560, 1623, 1642, 2067, 2155
Hpy99I CGWCG 3 cut(s) 47, 86, 283
HpyCH4III ACNGT 9 cut(s) 372, 1061, 1246, 1867, 2027, 2391, 2460, 2481, 2642
HpyCH4IV ACGT 3 cut(s) 154, 1556, 2583
HpyF3I CTNAG 4 cut(s) 888, 1512, 1581, 1741
HpySE526I ACGT 3 cut(s) 154, 1556, 2583
Hsp92I GRCGYC 4 cut(s) 42, 167, 1041, 1556
HspAI GCGC 4 cut(s) 203, 205, 207, 209
Kpn2I TCCGGA 1 cut(s) 114
Ksp22I TGATCA 2 cut(s) 1474, 1494
KspAI GTTAAC 1 cut(s) 2067
KspI CCGCGG 1 cut(s) 37
LguI GCTCTTC 1 cut(s) 2220
LmnI GCTCC 2 cut(s) 243, 1726
Lsp1109I GCAGC 2 cut(s) 1747, 2414
LweI GCATC 6 cut(s) 638, 907, 929, 1187, 1772, 2614
MaeI CTAG 7 cut(s) 180, 249, 816, 1128, 1521, 1725, 2330
MaeII ACGT 3 cut(s) 154, 1556, 2583
MaeIII GTNAC 5 cut(s) 1061, 1315, 1411, 2021, 2380
MauBI CGCGCGCG 2 cut(s) 205, 207
MbiI CCGCTC 1 cut(s) 17
MfeI CAATTG 2 cut(s) 446, 1269
MflI RGATCY 2 cut(s) 71, 1927
MhlI GDGCHC 6 cut(s) 108, 248, 1437, 1625, 1723, 2749
MluCI AATT 8 cut(s) 446, 489, 553, 604, 1269, 1348, 2136, 2487
MlyI GAGTC 8 cut(s) 310, 349, 719, 1125, 1475, 1598, 2228, 2732
MmeI TCCRAC 2 cut(s) 284, 2180
Mph1103I ATGCAT 1 cut(s) 922
MroI TCCGGA 1 cut(s) 114
MseI TTAA 2 cut(s) 2066, 2630
MslI CAYNNNNRTG 1 cut(s) 1611
MspA1I CMGCKG 1 cut(s) 36
MspI CCGG 4 cut(s) 102, 115, 344, 375
MspR9I CCNGG 6 cut(s) 102, 103, 345, 376, 1037, 2312
MunI CAATTG 2 cut(s) 446, 1269
MvaI CCWGG 2 cut(s) 1037, 2312
MvnI CGCG 6 cut(s) 36, 205, 207, 209, 211, 278
NciI CCSGG 4 cut(s) 102, 103, 345, 376
NcoI CCATGG 1 cut(s) 975
NheI GCTAGC 1 cut(s) 179
NlaIV GGNNCC 5 cut(s) 106, 336, 1375, 1876, 1929
NmuCI GTSAC 3 cut(s) 1061, 1411, 2021
NsiI ATGCAT 1 cut(s) 922
NspI RCATGY 1 cut(s) 986
NspV TTCGAA 1 cut(s) 2491
PagI TCATGA 2 cut(s) 826, 1606
PaqCI CACCTGC 1 cut(s) 1063
PauI GCGCGC 3 cut(s) 203, 205, 207
PciI ACATGT 1 cut(s) 982
PciSI GCTCTTC 1 cut(s) 2220
PcsI WCGNNNNNNNCGW 1 cut(s) 1065
PfeI GAWTC 7 cut(s) 685, 1223, 1784, 2007, 2315, 2411, 2528
PflMI CCANNNNNTGG 1 cut(s) 2375
PfoI TCCNGGA 1 cut(s) 374
PleI GAGTC 8 cut(s) 309, 348, 718, 1125, 1474, 1597, 2228, 2732
PmaCI CACGTG 1 cut(s) 155
PmlI CACGTG 1 cut(s) 155
PpsI GAGTC 8 cut(s) 309, 348, 718, 1125, 1474, 1597, 2228, 2732
Ppu21I YACGTR 1 cut(s) 155
PscI ACATGT 1 cut(s) 982
Psp124BI GAGCTC 3 cut(s) 248, 1437, 1723
Psp6I CCWGG 2 cut(s) 1035, 2310
PspCI CACGTG 1 cut(s) 155
PspFI CCCAGC 1 cut(s) 2770
PspGI CCWGG 2 cut(s) 1035, 2310
PspN4I GGNNCC 5 cut(s) 106, 336, 1375, 1876, 1929
PspOMI GGGCCC 1 cut(s) 104
PstI CTGCAG 2 cut(s) 1387, 1678
PsuI RGATCY 2 cut(s) 71, 1927
PteI GCGCGC 3 cut(s) 203, 205, 207
RsaI GTAC 4 cut(s) 981, 1664, 1869, 2308
RsaNI GTAC 4 cut(s) 980, 1663, 1868, 2307
RseI CAYNNNNRTG 1 cut(s) 1611
Rsr2I CGGWCCG 1 cut(s) 372
RsrII CGGWCCG 1 cut(s) 372
SacI GAGCTC 3 cut(s) 248, 1437, 1723
SacII CCGCGG 1 cut(s) 37
SalI GTCGAC 1 cut(s) 158
SapI GCTCTTC 1 cut(s) 2220
SaqAI TTAA 2 cut(s) 2066, 2630
SbfI CCTGCAGG 1 cut(s) 1678
ScaI AGTACT 1 cut(s) 1869
SchI GAGTC 8 cut(s) 310, 349, 719, 1125, 1475, 1598, 2228, 2732
ScrFI CCNGG 6 cut(s) 102, 103, 345, 376, 1037, 2312
SdaI CCTGCAGG 1 cut(s) 1678
SduI GDGCHC 6 cut(s) 108, 248, 1437, 1625, 1723, 2749
SfaNI GCATC 6 cut(s) 638, 907, 929, 1187, 1772, 2614
SfcI CTRYAG 3 cut(s) 1275, 1383, 1674
Sfr303I CCGCGG 1 cut(s) 37
SfuI TTCGAA 1 cut(s) 2491
SgrBI CCGCGG 1 cut(s) 37
SinI GGWCC 4 cut(s) 216, 335, 372, 1964
SmaI CCCGGG 1 cut(s) 103
SmiMI CAYNNNNRTG 1 cut(s) 1611
SmlI CTYRAG 2 cut(s) 1311, 2080
SmoI CTYRAG 2 cut(s) 1311, 2080
SrfI GCCCGGGC 1 cut(s) 103
Sse8387I CCTGCAGG 1 cut(s) 1678
Sse9I AATT 8 cut(s) 446, 489, 553, 604, 1269, 1348, 2136, 2487
SspMI CTAG 7 cut(s) 180, 249, 816, 1128, 1521, 1725, 2330
SstI GAGCTC 3 cut(s) 248, 1437, 1723
StyD4I CCNGG 6 cut(s) 100, 101, 343, 374, 1035, 2310
StyI CCWWGG 3 cut(s) 975, 1293, 2422
TaaI ACNGT 9 cut(s) 372, 1061, 1246, 1867, 2027, 2391, 2460, 2481, 2642
TaiI ACGT 3 cut(s) 157, 1559, 2586
TaqI TCGA 7 cut(s) 159, 327, 713, 796, 923, 1068, 2491
TasI AATT 8 cut(s) 446, 489, 553, 604, 1269, 1348, 2136, 2487
TatI WGTACW 2 cut(s) 1662, 1867
TauI GCSGC 9 cut(s) 24, 39, 42, 50, 145, 179, 186, 198, 278
TfiI GAWTC 7 cut(s) 685, 1223, 1784, 2007, 2315, 2411, 2528
Tru1I TTAA 2 cut(s) 2066, 2630
Tru9I TTAA 2 cut(s) 2066, 2630
TscAI CASTG 5 cut(s) 1251, 1387, 1420, 2099, 2236
TseFI GTSAC 3 cut(s) 1061, 1411, 2021
TseI GCWGC 2 cut(s) 1760, 2427
Tsp45I GTSAC 3 cut(s) 1061, 1411, 2021
TspDTI ATGAA 6 cut(s) 815, 920, 1251, 1467, 2054, 2207
TspGWI ACGGA 2 cut(s) 160, 2334
TspMI CCCGGG 1 cut(s) 101
TspRI CASTG 5 cut(s) 1251, 1387, 1420, 2099, 2236
Van91I CCANNNNNTGG 1 cut(s) 2375
VneI GTGCAC 1 cut(s) 1621
VpaK11BI GGWCC 4 cut(s) 216, 335, 372, 1964
XagI CCTNNNNNAGG 1 cut(s) 1674
XapI RAATTY 1 cut(s) 553
XbaI TCTAGA 1 cut(s) 2329
XceI RCATGY 1 cut(s) 986
XcmI CCANNNNNNNNNTGG 2 cut(s) 226, 1841
XmaI CCCGGG 1 cut(s) 101
XmiI GTMKAC 1 cut(s) 159
XspI CTAG 7 cut(s) 180, 249, 816, 1128, 1521, 1725, 2330
ZraI GACGTC 1 cut(s) 1557
ZrmI AGTACT 1 cut(s) 1869
Zsp2I ATGCAT 1 cut(s) 922
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.