Rh4CG055300
ERF Family

Transducin WD40 repeat-like superfamily protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
OG0007851
Physical Location & Seq
Forward (+)
10876822 .. 10881171
4350 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG055300.1

Sequence Viewer

Length: 2262 bp
ATGTCCGCCTTATCCGCTCGCCGCCTCAAAGACCGCGGCGGCGTCGCCGCACCCACCAAACCCGACAAGAGATCCTCCAGCGTCGGCAAGGAAAACCCGCCCGGGCCCACTTTCCGGACTTCGGCCCAGAAGCCCGCCTTGCGGCCCGTTCCACGTGTCGACAAGGCGGCGGCGAATACCGGCGGCGATGCGCGCGCGCGGTGGTCCATGCCTTCTGTGGCGAAAGGTAGGAGCTCTAGCCCTTCTGAGTTTTTTAGGGTTGCCGCGTCGGGAAATGTTGGGCCGAAGAATCGGAGGGGTTCGGCGGATCGGGTCGAGAGGGGTCCGAGTCCGGGTTCGGGTTCGGGTTCGGGAGAGAGGGAACGGTCCGGGAGTGCAGGGAGGAGTTTGAGTAGGGGGAGAGGATCAGGGGTTAGGGATTTGGAAGTCAAAGTTGGTCAATTGGGGGTTAGGGTTTTCAGGGATTTGAAAGATGATGGTAAAATTGGGGTGAAAAAGAATGGAACTTGTGGAGGACTGGAAGTGAAATCGGTGGAGATTGAGAAGAATTTGAGTGGGGTTAGGTCTAGGGTTTTGGGCAGTTGTGATGGAGTAGCTAATTTGAAAAACCCAGATGGGGTTGATGGTAGGGTTTTGGAGACATGCAATAGTGGAAAGAGTAGAAGTAGTGATATTGGGAATCGGGCTGGTTTGGGATTGAAGGAGTCGAGTGAGAAATGTGTGAGCAATGGGAAGGTTTTGGAGGGTTTGAAAGAGAAGGGGTTGAAGGAAGAGGGAAGTAATGGCGGTCGTGTTGGTATAAAACATCCTACTAAGCTTCATGAGAAGCTTGCTTTCTTGGAAGGGAAGGTGAAGAGGATTGCGTCTGATATAAAGAAGACTAAGGAGATATTGGATATGAATAACCCAGATGCATCCAAGGTGATACTTTCTGATATTCAGGAGAAGATTACAGGGATTGAGAAGGCCATGGTACATGTTTCCAATGGCTCTGGTGGTAAGGTGTTGAAAGGTAATGAGCAGGATCACCAGGACGCCAAAGTGGTTGAGAACGGTCACATTGAGCAGGTGTGTAAGGTGAAGAGTTCGGTAAAGGGTTTGAATCGTGAGGACTTGGAAGCTAGACTCTTTCCTCATCATAAGTTGATTAGAAACCGCACAGCCTTGAAAGCATCATCAGAAAGTTCTCAATGTCAAGTAGTTGAAACCAGTTGTGAATCAAAAGTGGATGAAAAGACAGTGTGCCTTATAGATGAGAACCCAATTGCTATAGAGTTCTTGGCTTCCTTGGATAATGAGCAAACTCAAGTTACTACAAGGGATGGACACGAGGATTTGGAAAATTGTGAGGTTCAAGCTGTGGATGGTGCCACCACTGCAGGAGTTGAAAAACCTTCAAAAATGGTCACTGGTAAGCAGGATGACGAGCTCATTCTCACAACTGATGAAACACTTGATGAGTCCGGTGATCAGGAGAATAGACAAGTGATCGTTGATGAGGAAACTGAGGATTCTAGCATTTACCAGCTCAATGGAATAGGCCAAAAGACCTCAACTGGTGGGTGGTTTATGTCTGAGGGAGAGTCAGTTCTTCTTGCTCATGATGATGGTTCGTGCACCTTCTATGATATTGTAAACTCTGAGGAAAAGGCTTTGTACAAGCCTCCTGCAGGAGTTTCACCTAATATGTGGAGAGATTGCTGGATCATCCGAGCTCCTAGTGCAGATGGTTGCTCAGGAAGGTATGTTGTGGCTGCATCTGCTGGAAACACAATGGATTCAGGTTTTTGCTCGTGGGATTTTTATGCCAAAGATGTGTGTGCTTTCCATATTGACGATGGTTTAGCCCCGTCAAGGACAGTACTTGGCCCCTTGCCCGACAACATCTCATACAGAAGAAACACTTTGTCTAATCTTTTGGATCCAGAAACTCAACAATGGTGGTATAGACCTTGTGGACCTCTTATTGTCTCATCTGCCACCTGTCAGAGAGTTGTGAGAATCTATGACATTCGTGACGGTGAGCAAGTTATGAAATGGGATGTACCGAAGCCTGTGTTAACAATGGATAACTCAAGCCCCTTGCAGTGGAGAAACAGAGGAAAAGTTGTTGTAGCTGACATTGAAACAATTTCCATCTGGGATGTGAACTCTCTCAACCCTCAACCTTTATTATCTGTTTCTTCTGCTGGTCGGAAAATCTCTGCTCTTCATGTGAATAACACTGACTCTGAACTTGGTGGCGGAGTTCGCCAAAGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005618 GO:0005623 GO:0030312 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

753

Amino Acids

81.29

Weight (kDa)

7.8

Isoelectric Point (pI)

41.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_At4g14310 PF25465 642 - 753 9.6e-63 At4g14310 8-bladed propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1057
Acc36I ACCTGC 1 cut(s) 1057
AccB1I GGYRCC 1 cut(s) 1367
AccBSI CCGCTC 1 cut(s) 17
AccI GTMKAC 1 cut(s) 159
AccII CGCG 6 cut(s) 36, 193, 195, 197, 199, 266
AccIII TCCGGA 1 cut(s) 114
AclWI GGATC 7 cut(s) 66, 315, 412, 1032, 1712, 1916, 1929
AcsI RAATTY 1 cut(s) 547
AcvI CACGTG 1 cut(s) 155
AcyI GRCGYC 2 cut(s) 42, 1035
AfaI GTAC 4 cut(s) 975, 1658, 1863, 2046
AfiI CCNNNNNNNGG 9 cut(s) 114, 121, 141, 332, 338, 616, 1670, 1854, 2088
AflIII ACRYGT 2 cut(s) 154, 976
AjnI CCWGG 1 cut(s) 1029
AjuI GAANNNNNNNTTGG 2 cut(s) 417, 449
AloI GAACNNNNNNTCC 2 cut(s) 1572, 1604
Alw21I GWGCWC 4 cut(s) 236, 1431, 1619, 1717
Alw26I GTCTC 2 cut(s) 632, 1975
Alw44I GTGCAC 1 cut(s) 1615
AlwI GGATC 7 cut(s) 66, 315, 412, 1032, 1712, 1916, 1929
Ama87I CYCGRG 1 cut(s) 101
Aor13HI TCCGGA 1 cut(s) 114
AoxI GGCC 7 cut(s) 104, 123, 143, 281, 966, 1540, 1867
ApaI GGGCCC 1 cut(s) 108
ApaLI GTGCAC 1 cut(s) 1615
ApeKI GCWGC 1 cut(s) 1754
ApoI RAATTY 1 cut(s) 547
AspLEI GCGC 4 cut(s) 193, 195, 197, 199
AsuC2I CCSGG 4 cut(s) 102, 103, 333, 370
AsuHPI GGTGA 8 cut(s) 502, 862, 934, 1019, 1090, 1478, 1671, 2033
AvaI CYCGRG 1 cut(s) 101
AvaII GGWCC 4 cut(s) 204, 323, 366, 1958
BaeGI GKGCMC 2 cut(s) 108, 1619
BamHI GGATCC 1 cut(s) 1921
BanI GGYRCC 1 cut(s) 1367
BanII GRGCYC 4 cut(s) 108, 236, 1431, 1717
BauI CACGAG 2 cut(s) 1328, 1792
BbrPI CACGTG 1 cut(s) 155
BbsI GAAGAC 1 cut(s) 884
Bbv12I GWGCWC 4 cut(s) 236, 1431, 1619, 1717
BbvI GCAGC 1 cut(s) 1741
BciT130I CCWGG 1 cut(s) 1031
BclI TGATCA 1 cut(s) 1468
BcnI CCSGG 4 cut(s) 102, 103, 333, 370
BcoDI GTCTC 2 cut(s) 632, 1975
BfaI CTAG 5 cut(s) 237, 567, 1122, 1515, 1719
BfmI CTRYAG 3 cut(s) 1269, 1377, 1668
BfuAI ACCTGC 1 cut(s) 1057
BmcAI AGTACT 1 cut(s) 1863
Bme1390I CCNGG 5 cut(s) 102, 103, 333, 370, 1031
Bme18I GGWCC 4 cut(s) 204, 323, 366, 1958
BmeT110I CYCGRG 1 cut(s) 101
BmiI GGNNCC 5 cut(s) 106, 324, 1369, 1870, 1923
BmrFI CCNGG 5 cut(s) 102, 103, 333, 370, 1031
BmsI GCATC 5 cut(s) 178, 901, 923, 1181, 1766
BpiI GAAGAC 1 cut(s) 884
BpmI CTGGAG 1 cut(s) 61
Bpu10I CCTNAGC 1 cut(s) 1735
BpuEI CTTGAG 2 cut(s) 1290, 2059
BpuMI CCSGG 4 cut(s) 102, 103, 333, 370
BsaAI YACGTR 1 cut(s) 155
BsaHI GRCGYC 2 cut(s) 42, 1035
BsaJI CCNNGG 5 cut(s) 34, 101, 918, 969, 1287
BsaWI WCCGGW 2 cut(s) 114, 1463
BsaXI ACNNNNNCTCC 4 cut(s) 376, 406, 1572, 1602
Bsc4I CCNNNNNNNGG 9 cut(s) 114, 121, 141, 332, 338, 616, 1670, 1854, 2088
Bse118I RCCGGY 1 cut(s) 179
Bse1I ACTGG 4 cut(s) 522, 1209, 1414, 1561
Bse3DI GCAATG 1 cut(s) 733
BseAI TCCGGA 1 cut(s) 114
BseBI CCWGG 1 cut(s) 1031
BseDI CCNNGG 5 cut(s) 34, 101, 918, 969, 1287
BseGI GGATG 9 cut(s) 805, 914, 1234, 1327, 1369, 1426, 1707, 2047, 2149
BseLI CCNNNNNNNGG 9 cut(s) 114, 121, 141, 332, 338, 616, 1670, 1854, 2088
BseMI GCAATG 1 cut(s) 733
BseMII CTCAG 5 cut(s) 237, 1497, 1566, 1632, 1749
BseNI ACTGG 4 cut(s) 522, 1209, 1414, 1561
BsePI GCGCGC 3 cut(s) 191, 193, 195
BseRI GAGGAG 1 cut(s) 397
BseSI GKGCMC 2 cut(s) 108, 1619
BseXI GCAGC 1 cut(s) 1741
BsgI GTGCAG 2 cut(s) 396, 1743
Bsh1236I CGCG 6 cut(s) 36, 193, 195, 197, 199, 266
Bsh1285I CGRYCG 1 cut(s) 790
BshFI GGCC 7 cut(s) 106, 125, 145, 283, 968, 1542, 1869
BshNI GGYRCC 1 cut(s) 1367
BsiEI CGRYCG 1 cut(s) 790
BsiHKAI GWGCWC 4 cut(s) 236, 1431, 1619, 1717
BsiHKCI CYCGRG 1 cut(s) 101
BsiSI CCGG 6 cut(s) 102, 115, 180, 332, 369, 1464
BslI CCNNNNNNNGG 9 cut(s) 114, 121, 141, 332, 338, 616, 1670, 1854, 2088
BsmAI GTCTC 2 cut(s) 632, 1975
BsnI GGCC 7 cut(s) 106, 125, 145, 283, 968, 1542, 1869
BsoBI CYCGRG 1 cut(s) 101
Bsp120I GGGCCC 1 cut(s) 104
Bsp1286I GDGCHC 5 cut(s) 108, 236, 1431, 1619, 1717
Bsp13I TCCGGA 1 cut(s) 114
Bsp1407I TGTACA 1 cut(s) 1656
Bsp143I GATC 8 cut(s) 71, 307, 404, 1024, 1468, 1488, 1704, 1921
Bsp19I CCATGG 1 cut(s) 969
BspANI GGCC 7 cut(s) 106, 125, 145, 283, 968, 1542, 1869
BspCNI CTCAG 5 cut(s) 238, 1498, 1567, 1633, 1748
BspEI TCCGGA 1 cut(s) 114
BspFNI CGCG 6 cut(s) 36, 193, 195, 197, 199, 266
BspHI TCATGA 2 cut(s) 820, 1600
BspLI GGNNCC 5 cut(s) 106, 324, 1369, 1870, 1923
BspMAI CTGCAG 2 cut(s) 1381, 1672
BspMI ACCTGC 1 cut(s) 1057
BspPI GGATC 7 cut(s) 66, 315, 412, 1032, 1712, 1916, 1929
BspQI GCTCTTC 1 cut(s) 2214
BspT107I GGYRCC 1 cut(s) 1367
BsrBI CCGCTC 1 cut(s) 17
BsrDI GCAATG 1 cut(s) 733
BsrFI RCCGGY 1 cut(s) 179
BsrGI TGTACA 1 cut(s) 1656
BsrI ACTGG 4 cut(s) 522, 1209, 1414, 1561
BssAI RCCGGY 1 cut(s) 179
BssECI CCNNGG 5 cut(s) 34, 101, 918, 969, 1287
BssHII GCGCGC 3 cut(s) 191, 193, 195
BssMI GATC 8 cut(s) 71, 307, 404, 1024, 1468, 1488, 1704, 1921
BssNI GRCGYC 2 cut(s) 42, 1035
BssSI CACGAG 2 cut(s) 1328, 1792
BssT1I CCWWGG 3 cut(s) 918, 969, 1287
Bst2BI CACGAG 2 cut(s) 1328, 1792
Bst2UI CCWGG 1 cut(s) 1031
Bst4CI ACNGT 5 cut(s) 366, 1055, 1240, 1861, 2021
Bst6I CTCTTC 4 cut(s) 765, 848, 1076, 2214
BstACI GRCGYC 2 cut(s) 42, 1035
BstAUI TGTACA 1 cut(s) 1656
BstBAI YACGTR 1 cut(s) 155
BstC8I GCNNGC 6 cut(s) 19, 135, 193, 195, 197, 831
BstDEI CTNAG 7 cut(s) 246, 813, 882, 1506, 1575, 1641, 1735
BstDSI CCRYGG 2 cut(s) 34, 969
BstENI CCTNNNNNAGG 1 cut(s) 1668
BstF5I GGATG 9 cut(s) 805, 914, 1234, 1327, 1369, 1426, 1707, 2047, 2149
BstFNI CGCG 6 cut(s) 36, 193, 195, 197, 199, 266
BstHHI GCGC 4 cut(s) 193, 195, 197, 199
BstKTI GATC 8 cut(s) 74, 310, 407, 1027, 1471, 1491, 1707, 1924
BstMAI GTCTC 2 cut(s) 632, 1975
BstMBI GATC 8 cut(s) 71, 307, 404, 1024, 1468, 1488, 1704, 1921
BstMCI CGRYCG 1 cut(s) 790
BstMWI GCNNNNNNNGC 8 cut(s) 14, 139, 192, 1169, 1376, 1721, 1760, 2250
BstNI CCWGG 1 cut(s) 1031
BstNSI RCATGY 2 cut(s) 645, 980
BstSCI CCNGG 5 cut(s) 100, 101, 331, 368, 1029
BstSFI CTRYAG 3 cut(s) 1269, 1377, 1668
BstSLI GKGCMC 2 cut(s) 108, 1619
BstUI CGCG 6 cut(s) 36, 193, 195, 197, 199, 266
BstV1I GCAGC 1 cut(s) 1741
BstV2I GAAGAC 1 cut(s) 884
BstX2I RGATCY 2 cut(s) 71, 1921
BstXI CCANNNNNNTGG 1 cut(s) 1532
BstYI RGATCY 2 cut(s) 71, 1921
BsuRI GGCC 7 cut(s) 106, 125, 145, 283, 968, 1542, 1869
BtgI CCRYGG 2 cut(s) 34, 969
BtgZI GCGATG 1 cut(s) 201
BtsCI GGATG 9 cut(s) 805, 914, 1234, 1327, 1369, 1426, 1707, 2047, 2149
BtsI GCAGTG 2 cut(s) 1374, 2093
BtsIMutI CAGTG 5 cut(s) 1245, 1374, 1407, 2093, 2223
BveI ACCTGC 1 cut(s) 1057
Cac8I GCNNGC 6 cut(s) 19, 135, 193, 195, 197, 831
CciI TCATGA 2 cut(s) 820, 1600
CfoI GCGC 4 cut(s) 193, 195, 197, 199
Cfr10I RCCGGY 1 cut(s) 179
Cfr42I CCGCGG 1 cut(s) 37
Cfr9I CCCGGG 1 cut(s) 101
CpoI CGGWCCG 1 cut(s) 366
CseI GACGC 5 cut(s) 31, 70, 255, 852, 1043
Csp6I GTAC 4 cut(s) 974, 1657, 1862, 2045
CspCI CAANNNNNGTGG 2 cut(s) 1922, 1957
CspI CGGWCCG 1 cut(s) 366
CviAII CATG 7 cut(s) 208, 642, 821, 970, 977, 1601, 2213
CviQI GTAC 4 cut(s) 974, 1657, 1862, 2045
DdeI CTNAG 7 cut(s) 246, 813, 882, 1506, 1575, 1641, 1735
DpnI GATC 8 cut(s) 73, 309, 406, 1026, 1470, 1490, 1706, 1923
DpnII GATC 8 cut(s) 71, 307, 404, 1024, 1468, 1488, 1704, 1921
Eam1104I CTCTTC 4 cut(s) 765, 848, 1076, 2214
EarI CTCTTC 4 cut(s) 765, 848, 1076, 2214
EciI GGCGGA 2 cut(s) 320, 2259
Ecl136II GAGCTC 3 cut(s) 234, 1429, 1715
Eco130I CCWWGG 3 cut(s) 918, 969, 1287
Eco24I GRGCYC 4 cut(s) 108, 236, 1431, 1717
Eco47I GGWCC 4 cut(s) 204, 323, 366, 1958
Eco53kI GAGCTC 3 cut(s) 234, 1429, 1715
Eco72I CACGTG 1 cut(s) 155
Eco88I CYCGRG 1 cut(s) 101
EcoICRI GAGCTC 3 cut(s) 234, 1429, 1715
EcoNI CCTNNNNNAGG 1 cut(s) 1668
EcoRII CCWGG 1 cut(s) 1029
EcoT14I CCWWGG 3 cut(s) 918, 969, 1287
EcoT22I ATGCAT 1 cut(s) 916
EcoT38I GRGCYC 4 cut(s) 108, 236, 1431, 1717
ErhI CCWWGG 3 cut(s) 918, 969, 1287
FaeI CATG 7 cut(s) 211, 645, 824, 973, 980, 1604, 2216
FalI AAGNNNNNCTT 4 cut(s) 122, 154, 1888, 1920
FatI CATG 7 cut(s) 207, 641, 820, 969, 976, 1600, 2212
FauI CCCGC 2 cut(s) 105, 142
FbaI TGATCA 1 cut(s) 1468
FblI GTMKAC 1 cut(s) 159
FokI GGATG 9 cut(s) 792, 901, 1241, 1334, 1376, 1433, 1694, 2054, 2156
FriOI GRGCYC 4 cut(s) 108, 236, 1431, 1717
FspBI CTAG 5 cut(s) 237, 567, 1122, 1515, 1719
GlaI GCGC 4 cut(s) 192, 194, 196, 198
GsuI CTGGAG 1 cut(s) 61
HaeIII GGCC 7 cut(s) 106, 125, 145, 283, 968, 1542, 1869
HapII CCGG 6 cut(s) 102, 115, 180, 332, 369, 1464
HgaI GACGC 5 cut(s) 31, 70, 255, 852, 1043
HhaI GCGC 4 cut(s) 193, 195, 197, 199
Hin1I GRCGYC 2 cut(s) 42, 1035
Hin1II CATG 7 cut(s) 211, 645, 824, 973, 980, 1604, 2216
Hin6I GCGC 4 cut(s) 191, 193, 195, 197
HinP1I GCGC 4 cut(s) 191, 193, 195, 197
HincII GTYRAC 2 cut(s) 160, 2061
HindII GTYRAC 2 cut(s) 160, 2061
HindIII AAGCTT 2 cut(s) 815, 827
HpaI GTTAAC 1 cut(s) 2061
HpaII CCGG 6 cut(s) 102, 115, 180, 332, 369, 1464
HphI GGTGA 8 cut(s) 502, 862, 934, 1019, 1090, 1478, 1671, 2033
Hpy166II GTNNAC 6 cut(s) 160, 1617, 1636, 1958, 2061, 2149
Hpy8I GTNNAC 6 cut(s) 160, 1617, 1636, 1958, 2061, 2149
Hpy99I CGWCG 3 cut(s) 47, 86, 271
HpyCH4III ACNGT 5 cut(s) 366, 1055, 1240, 1861, 2021
HpyCH4IV ACGT 1 cut(s) 154
HpyCH4V TGCA 9 cut(s) 377, 645, 914, 1379, 1617, 1670, 1724, 1757, 2086
HpyF10VI GCNNNNNNNGC 8 cut(s) 14, 139, 192, 1169, 1376, 1721, 1760, 2250
HpyF3I CTNAG 7 cut(s) 246, 813, 882, 1506, 1575, 1641, 1735
HpySE526I ACGT 1 cut(s) 154
Hsp92I GRCGYC 2 cut(s) 42, 1035
Hsp92II CATG 7 cut(s) 211, 645, 824, 973, 980, 1604, 2216
HspAI GCGC 4 cut(s) 191, 193, 195, 197
Kpn2I TCCGGA 1 cut(s) 114
Ksp22I TGATCA 1 cut(s) 1468
KspAI GTTAAC 1 cut(s) 2061
KspI CCGCGG 1 cut(s) 37
Kzo9I GATC 8 cut(s) 71, 307, 404, 1024, 1468, 1488, 1704, 1921
LguI GCTCTTC 1 cut(s) 2214
LmnI GCTCC 2 cut(s) 231, 1720
Lsp1109I GCAGC 1 cut(s) 1741
LweI GCATC 5 cut(s) 178, 901, 923, 1181, 1766
MaeI CTAG 5 cut(s) 237, 567, 1122, 1515, 1719
MaeII ACGT 1 cut(s) 154
MaeIII GTNAC 4 cut(s) 1055, 1309, 1405, 2015
MalI GATC 8 cut(s) 73, 309, 406, 1026, 1470, 1490, 1706, 1923
MauBI CGCGCGCG 2 cut(s) 193, 195
MbiI CCGCTC 1 cut(s) 17
MboI GATC 8 cut(s) 71, 307, 404, 1024, 1468, 1488, 1704, 1921
MfeI CAATTG 2 cut(s) 440, 1263
MflI RGATCY 2 cut(s) 71, 1921
MhlI GDGCHC 5 cut(s) 108, 236, 1431, 1619, 1717
MluCI AATT 7 cut(s) 440, 483, 547, 598, 1263, 1342, 2130
MlyI GAGTC 6 cut(s) 337, 713, 1119, 1469, 1592, 2222
MmeI TCCRAC 1 cut(s) 2174
Mph1103I ATGCAT 1 cut(s) 916
MroI TCCGGA 1 cut(s) 114
MseI TTAA 1 cut(s) 2060
MslI CAYNNNNRTG 1 cut(s) 1605
MspA1I CMGCKG 1 cut(s) 36
MspI CCGG 6 cut(s) 102, 115, 180, 332, 369, 1464
MspR9I CCNGG 5 cut(s) 102, 103, 333, 370, 1031
MunI CAATTG 2 cut(s) 440, 1263
MvaI CCWGG 1 cut(s) 1031
MvnI CGCG 6 cut(s) 36, 193, 195, 197, 199, 266
MwoI GCNNNNNNNGC 8 cut(s) 14, 139, 192, 1169, 1376, 1721, 1760, 2250
NciI CCSGG 4 cut(s) 102, 103, 333, 370
NcoI CCATGG 1 cut(s) 969
NdeII GATC 8 cut(s) 71, 307, 404, 1024, 1468, 1488, 1704, 1921
NlaIII CATG 7 cut(s) 211, 645, 824, 973, 980, 1604, 2216
NlaIV GGNNCC 5 cut(s) 106, 324, 1369, 1870, 1923
NmuCI GTSAC 3 cut(s) 1055, 1405, 2015
NsiI ATGCAT 1 cut(s) 916
NspI RCATGY 2 cut(s) 645, 980
PagI TCATGA 2 cut(s) 820, 1600
PaqCI CACCTGC 1 cut(s) 1057
PauI GCGCGC 3 cut(s) 191, 193, 195
PciI ACATGT 1 cut(s) 976
PciSI GCTCTTC 1 cut(s) 2214
PfeI GAWTC 7 cut(s) 289, 679, 1102, 1217, 1511, 1778, 2001
PfoI TCCNGGA 1 cut(s) 368
PleI GAGTC 6 cut(s) 336, 712, 1119, 1468, 1591, 2222
PmaCI CACGTG 1 cut(s) 155
PmlI CACGTG 1 cut(s) 155
PpsI GAGTC 6 cut(s) 336, 712, 1119, 1468, 1591, 2222
Ppu21I YACGTR 1 cut(s) 155
PscI ACATGT 1 cut(s) 976
Psp124BI GAGCTC 3 cut(s) 236, 1431, 1717
Psp6I CCWGG 1 cut(s) 1029
PspCI CACGTG 1 cut(s) 155
PspGI CCWGG 1 cut(s) 1029
PspN4I GGNNCC 5 cut(s) 106, 324, 1369, 1870, 1923
PspOMI GGGCCC 1 cut(s) 104
PstI CTGCAG 2 cut(s) 1381, 1672
PsuI RGATCY 2 cut(s) 71, 1921
PteI GCGCGC 3 cut(s) 191, 193, 195
RsaI GTAC 4 cut(s) 975, 1658, 1863, 2046
RsaNI GTAC 4 cut(s) 974, 1657, 1862, 2045
RseI CAYNNNNRTG 1 cut(s) 1605
Rsr2I CGGWCCG 1 cut(s) 366
RsrII CGGWCCG 1 cut(s) 366
SacI GAGCTC 3 cut(s) 236, 1431, 1717
SacII CCGCGG 1 cut(s) 37
SalI GTCGAC 1 cut(s) 158
SapI GCTCTTC 1 cut(s) 2214
SaqAI TTAA 1 cut(s) 2060
Sau3AI GATC 8 cut(s) 71, 307, 404, 1024, 1468, 1488, 1704, 1921
SbfI CCTGCAGG 1 cut(s) 1672
ScaI AGTACT 1 cut(s) 1863
SchI GAGTC 6 cut(s) 337, 713, 1119, 1469, 1592, 2222
ScrFI CCNGG 5 cut(s) 102, 103, 333, 370, 1031
SdaI CCTGCAGG 1 cut(s) 1672
SduI GDGCHC 5 cut(s) 108, 236, 1431, 1619, 1717
SfaNI GCATC 5 cut(s) 178, 901, 923, 1181, 1766
SfcI CTRYAG 3 cut(s) 1269, 1377, 1668
Sfr303I CCGCGG 1 cut(s) 37
SgrBI CCGCGG 1 cut(s) 37
SinI GGWCC 4 cut(s) 204, 323, 366, 1958
SmaI CCCGGG 1 cut(s) 103
SmiMI CAYNNNNRTG 1 cut(s) 1605
SmlI CTYRAG 2 cut(s) 1305, 2074
SmoI CTYRAG 2 cut(s) 1305, 2074
SrfI GCCCGGGC 1 cut(s) 103
Sse8387I CCTGCAGG 1 cut(s) 1672
Sse9I AATT 7 cut(s) 440, 483, 547, 598, 1263, 1342, 2130
SspMI CTAG 5 cut(s) 237, 567, 1122, 1515, 1719
SstI GAGCTC 3 cut(s) 236, 1431, 1717
StyD4I CCNGG 5 cut(s) 100, 101, 331, 368, 1029
StyI CCWWGG 3 cut(s) 918, 969, 1287
TaaI ACNGT 5 cut(s) 366, 1055, 1240, 1861, 2021
TaiI ACGT 1 cut(s) 157
TaqI TCGA 3 cut(s) 159, 315, 707
TasI AATT 7 cut(s) 440, 483, 547, 598, 1263, 1342, 2130
TatI WGTACW 2 cut(s) 1656, 1861
TauI GCSGC 9 cut(s) 24, 39, 42, 50, 145, 170, 173, 186, 266
TfiI GAWTC 7 cut(s) 289, 679, 1102, 1217, 1511, 1778, 2001
Tru1I TTAA 1 cut(s) 2060
Tru9I TTAA 1 cut(s) 2060
TscAI CASTG 5 cut(s) 1245, 1381, 1414, 2093, 2230
TseFI GTSAC 3 cut(s) 1055, 1405, 2015
TseI GCWGC 1 cut(s) 1754
Tsp45I GTSAC 3 cut(s) 1055, 1405, 2015
TspDTI ATGAA 6 cut(s) 809, 914, 1245, 1461, 2048, 2201
TspMI CCCGGG 1 cut(s) 101
TspRI CASTG 5 cut(s) 1245, 1381, 1414, 2093, 2230
VneI GTGCAC 1 cut(s) 1615
VpaK11BI GGWCC 4 cut(s) 204, 323, 366, 1958
XagI CCTNNNNNAGG 1 cut(s) 1668
XapI RAATTY 1 cut(s) 547
XceI RCATGY 2 cut(s) 645, 980
XcmI CCANNNNNNNNNTGG 2 cut(s) 214, 1835
XmaI CCCGGG 1 cut(s) 101
XmiI GTMKAC 1 cut(s) 159
XspI CTAG 5 cut(s) 237, 567, 1122, 1515, 1719
ZrmI AGTACT 1 cut(s) 1863
Zsp2I ATGCAT 1 cut(s) 916
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.