Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0024365.1

Orthogroup ID

OG0007851

Physical Location & Seq

Genomic Coordinates Reverse (-)

7996 .. 11482

Gene Structure 3487 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0024365.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2784 bp

atgtccgccttatccgctcgccgcctcaaagaccgcggcggcgtcgccgcacccaccaaacccgaaaggagatcctccagcgtcggcaaagaaaacccgcccgggcccactttccggacttcggcccagaagcccaccatgaggcccgttccacgtgtcgacaaggcggcggcgaataccggcggcgatgcgcgcgcgcggtggtccatgccttctgtggcgaaaggtaggagctctagcccttctgagttttttagggttgccgcgtcgggaaatgttgggccgaagaatcggaggggttcggcggatcgggtcgagaggggtccgagtccgggttcgggttcgggtgagagggaacggtccgggagtgcagggaggagtttgagtagggggagaggatcaggggttagggatttggaagtcaaagttggtcaactgggggttagggttttcagggatttgaaagatgatggtaaaattggggtgaaaaagaatggaacttgtggaggactggaagtgaaatcggtggagattgagaagaattggagtggggttaggtctagggttttgggcagttgtgatggagtagctaatttgaaaaacccagatggggttgatggtagggttttggagagatgcaatagtggaaagagtagaagtagtgatattgggaatcgggctggtttgggattgaaggagtcgagtgagaaatgtgtgagcaatgggaaggttttggagggtttgaaagagaaggggttgaaggaagagggaagtaatggcggtcgtgttggtataaaacatcctagtaagcttcatgagaagcttgctttcttggaagggaaggtgaagaggattgcgtctgatataaagaagactaaggagatattggatatgaataacccagatgcatcgaaggtgatactttctgatattcaggagaagattacagggattgagaaggccatggtacatgtttccaatggctctggtggtaaggtattgaaaggtaatgagcaggatcaccaggacgctaaagtggttgagaacggtcacatcgagcaggtgtgtaaggtgaagagttcggtaaagggtttgaatcgtgaggacttggaagctagactctttcctcatcataagttgattaggaaccgcacagccttgaaagcatcatcagaaagttctcaatgtcaagtagttgaaaccagttgtgaatcaaaagtggatgaaaagacagtgtgccttatagatgagaacccaattgctatagagttcttggcttccttggataatgagcaaactcaagttactacaatggatggacaagaggatttggaaaattgtgaggttcaagctgtggatggtgccaccactgcaggagttgaaaaatcttcaaaaatggtcactggtaagcaggatgacgagctcattctcacaactgatgaaacacttgatgagtccggtgatcaggagaatagacaagtgatagttgatgaggaaactgaggattctagcatttaccagctcaatggaataggccaaaagacctcaactggtgggtggtttatgtctgagggagagtcagttcttcttgctcatgatgatggttcgtgcaccttctatgatattgtaaactctgaggaaaaggctttgtacaagcctcctgcaggagtttcacctaatatgtggagagattgctggatcatccgagctcctagtgcagatggttgctcaggaaggtatgttgtggctgcatctgctggaaacacaatggattcaggtttttgctcgtgggatttttatgccaaagatgtgtctgctttccatattgacgacggtttagccccgtcaaggacagtacttggccccttgcccgacaacatctcatacagaagaaacactttgtctaatcttttggatccagaaactcaacaatggtggtatagaccttgtggacctcttattgtctcatctgccacctgtcagagagttgtgagaatctatgacattcgtgacggtgagcaagttatgaaatgggatgtaccgaagcctgtgttaacaatggataactcaagccccttgcagtggagaaacagaggaaaagttgttgtagctgacattgaaacaatttccatctgggatgtgaactctctcaaccctcaacctttattatctgtttcttctgctggtcggaaaatctctgctcttcatgtgaataacactgactccgaacttggtggcggagttcgccaaagagtaaggtcaggagaatcagaaggaaatgatgtagtgttctgtacccaggattcaataaacattctagattttcgcaatccgtctggtataggtctgaaaataccaaagcttggtgtaacagcacagtcagttttctctcgtggagattccatcttccttggctgtcccaatggaaggcctggatggaaaaaacagtcctcttcacaagtgcaacagttttcaattcgaaaacaaaggctaataagcacttacgccttgccagaatcaaatgctcacagccatcacacagctattactcaagtttgggggaactcaaacctagtcatgggtgtttgtggattggggctgtttgtgtttgatgccttgaaggatgacggtgtgccgtctttcaccaatgatagtggaagcactcaaaaagattgtgaagccattggcccagatgacttgtatgcaccttcttttgattacatggactctcgtgctcttatcatatcaagagatcgcccagcattatggaggcacttatcgtag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005618 GO:0005623 GO:0030312 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

927

Amino Acids

100.51

Weight (kDa)

7.47

Isoelectric Point (pI)

43.74

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007851)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G14310 AT4G14310
fragaria_vesca	FvH4_4g04020 FvH4_4g04020
malus_domestica	MD13G1216600.v1.1 MD16G1222000.v1.1
prunus_persica	Prupe.1G042300_v2.0.a1 Prupe.1G042300_v2.0.a1 Prupe.1G042300_v2.0.a1
pyrus_communis	pycom13g19000 pycom16g18610
rosa_chinensis	RchiOBHm_Chr4g0394291
rosa_laevigata	RLG00000009707
rosa_multiflora	Rmu_sc0007246.1_g000001 Rmu_sc0024365.1_g000001 Rmu_sc0027792.1_g000001 Rmu_sc0030561.1_g000001
rosa_roxburghii	Rroxscaffold_5G00339320
rosa_rugosa	Rorug03G0367900.1
rosa_samantha	Rh4AG051400 Rh4BG048600 Rh4CG055300 Rh4DG048300
rosa_wichuraiana	Rw4G004100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1051
Acc36I	ACCTGC	1 cut(s)	1051
AccB1I	GGYRCC	1 cut(s)	1361
AccB7I	CCANNNNNTGG	1 cut(s)	2363
AccBSI	CCGCTC	1 cut(s)	17
AccI	GTMKAC	1 cut(s)	159
AccII	CGCG	6 cut(s)	36, 193, 195, 197, 199, 266
AccIII	TCCGGA	1 cut(s)	114
AclWI	GGATC	7 cut(s)	66, 315, 406, 1026, 1706, 1910, 1923
AcvI	CACGTG	1 cut(s)	155
AcyI	GRCGYC	1 cut(s)	42
AfaI	GTAC	5 cut(s)	969, 1652, 1857, 2040, 2296
AflIII	ACRYGT	2 cut(s)	154, 970
AjnI	CCWGG	3 cut(s)	1023, 2298, 2431
AjuI	GAANNNNNNNTTGG	2 cut(s)	411, 443
AloI	GAACNNNNNNTCC	2 cut(s)	1566, 1598
Alw21I	GWGCWC	5 cut(s)	236, 1425, 1613, 1711, 2737
Alw26I	GTCTC	1 cut(s)	1969
Alw44I	GTGCAC	1 cut(s)	1609
AlwI	GGATC	7 cut(s)	66, 315, 406, 1026, 1706, 1910, 1923
Ama87I	CYCGRG	1 cut(s)	101
Aor13HI	TCCGGA	1 cut(s)	114
AoxI	GGCC	9 cut(s)	104, 123, 143, 281, 960, 1534, 1861, 2429, 2686
ApaI	GGGCCC	1 cut(s)	108
ApaLI	GTGCAC	1 cut(s)	1609
ApeKI	GCWGC	1 cut(s)	1748
AspLEI	GCGC	4 cut(s)	193, 195, 197, 199
AsuC2I	CCSGG	4 cut(s)	102, 103, 333, 364
AsuII	TTCGAA	1 cut(s)	2479
AvaI	CYCGRG	1 cut(s)	101
AvaII	GGWCC	4 cut(s)	204, 323, 360, 1952
BaeGI	GKGCMC	2 cut(s)	108, 1613
BamHI	GGATCC	1 cut(s)	1915
BanI	GGYRCC	1 cut(s)	1361
BanII	GRGCYC	4 cut(s)	108, 236, 1425, 1711
BauI	CACGAG	3 cut(s)	1786, 2391, 2730
BbrPI	CACGTG	1 cut(s)	155
BbsI	GAAGAC	1 cut(s)	878
Bbv12I	GWGCWC	5 cut(s)	236, 1425, 1613, 1711, 2737
BbvI	GCAGC	1 cut(s)	1735
BceAI	ACGGC	1 cut(s)	2620
BciT130I	CCWGG	3 cut(s)	1025, 2300, 2433
BclI	TGATCA	1 cut(s)	1462
BcnI	CCSGG	4 cut(s)	102, 103, 333, 364
BcoDI	GTCTC	1 cut(s)	1969
BfaI	CTAG	8 cut(s)	237, 561, 804, 1116, 1509, 1713, 2318, 2573
BfmI	CTRYAG	3 cut(s)	1263, 1371, 1662
BfuAI	ACCTGC	1 cut(s)	1051
BisI	GCNGC	9 cut(s)	22, 37, 40, 48, 168, 171, 184, 264, 1749
BlsI	GCNGC	9 cut(s)	23, 38, 41, 49, 169, 172, 185, 265, 1750
BmcAI	AGTACT	1 cut(s)	1857
Bme1390I	CCNGG	7 cut(s)	102, 103, 333, 364, 1025, 2300, 2433
Bme18I	GGWCC	4 cut(s)	204, 323, 360, 1952
BmeT110I	CYCGRG	1 cut(s)	101
BmiI	GGNNCC	6 cut(s)	106, 324, 1148, 1363, 1864, 1917
BmrFI	CCNGG	7 cut(s)	102, 103, 333, 364, 1025, 2300, 2433
BmrI	ACTGGG	1 cut(s)	446
BmsI	GCATC	7 cut(s)	178, 626, 895, 917, 1175, 1760, 2602
BmuI	ACTGGG	1 cut(s)	446
BpiI	GAAGAC	1 cut(s)	878
BpmI	CTGGAG	1 cut(s)	61
Bpu10I	CCTNAGC	1 cut(s)	1729
Bpu14I	TTCGAA	1 cut(s)	2479
BpuEI	CTTGAG	3 cut(s)	1284, 2053, 2535
BpuMI	CCSGG	4 cut(s)	102, 103, 333, 364
BsaAI	YACGTR	1 cut(s)	155
BsaHI	GRCGYC	1 cut(s)	42
BsaJI	CCNNGG	6 cut(s)	34, 101, 963, 1281, 2298, 2410
BsaWI	WCCGGW	2 cut(s)	114, 1457
BsaXI	ACNNNNNCTCC	6 cut(s)	370, 400, 1566, 1596, 2207, 2237
Bse118I	RCCGGY	1 cut(s)	179
Bse1I	ACTGG	5 cut(s)	441, 516, 1203, 1408, 1555
Bse3DI	GCAATG	1 cut(s)	727
BseAI	TCCGGA	1 cut(s)	114
BseBI	CCWGG	3 cut(s)	1025, 2300, 2433
BseDI	CCNNGG	6 cut(s)	34, 101, 963, 1281, 2298, 2410
BseMI	GCAATG	1 cut(s)	727
BseMII	CTCAG	5 cut(s)	237, 1491, 1560, 1626, 1743
BseNI	ACTGG	5 cut(s)	441, 516, 1203, 1408, 1555
BsePI	GCGCGC	3 cut(s)	191, 193, 195
BseRI	GAGGAG	1 cut(s)	391
BseSI	GKGCMC	2 cut(s)	108, 1613
BseXI	GCAGC	1 cut(s)	1735
BseYI	CCCAGC	1 cut(s)	2758
BsgI	GTGCAG	2 cut(s)	390, 1737
Bsh1236I	CGCG	6 cut(s)	36, 193, 195, 197, 199, 266
Bsh1285I	CGRYCG	1 cut(s)	784
BshFI	GGCC	9 cut(s)	106, 125, 145, 283, 962, 1536, 1863, 2431, 2688
BshNI	GGYRCC	1 cut(s)	1361
BsiEI	CGRYCG	1 cut(s)	784
BsiHKAI	GWGCWC	5 cut(s)	236, 1425, 1613, 1711, 2737
BsiHKCI	CYCGRG	1 cut(s)	101
BsiSI	CCGG	6 cut(s)	102, 115, 180, 332, 363, 1458
BslFI	GGGAC	1 cut(s)	2403
BsmAI	GTCTC	1 cut(s)	1969
BsmFI	GGGAC	1 cut(s)	2403
BsnI	GGCC	9 cut(s)	106, 125, 145, 283, 962, 1536, 1863, 2431, 2688
BsoBI	CYCGRG	1 cut(s)	101
Bsp119I	TTCGAA	1 cut(s)	2479
Bsp120I	GGGCCC	1 cut(s)	104
Bsp1286I	GDGCHC	6 cut(s)	108, 236, 1425, 1613, 1711, 2737
Bsp13I	TCCGGA	1 cut(s)	114
Bsp1407I	TGTACA	1 cut(s)	1650
Bsp143I	GATC	8 cut(s)	71, 307, 398, 1018, 1462, 1698, 1915, 2752
Bsp19I	CCATGG	1 cut(s)	963
BspANI	GGCC	9 cut(s)	106, 125, 145, 283, 962, 1536, 1863, 2431, 2688
BspCNI	CTCAG	5 cut(s)	238, 1492, 1561, 1627, 1742
BspEI	TCCGGA	1 cut(s)	114
BspFNI	CGCG	6 cut(s)	36, 193, 195, 197, 199, 266
BspHI	TCATGA	2 cut(s)	814, 1594
BspLI	GGNNCC	6 cut(s)	106, 324, 1148, 1363, 1864, 1917
BspMAI	CTGCAG	2 cut(s)	1375, 1666
BspMI	ACCTGC	1 cut(s)	1051
BspPI	GGATC	7 cut(s)	66, 315, 406, 1026, 1706, 1910, 1923
BspQI	GCTCTTC	1 cut(s)	2208
BspT104I	TTCGAA	1 cut(s)	2479
BspT107I	GGYRCC	1 cut(s)	1361
BsrBI	CCGCTC	1 cut(s)	17
BsrDI	GCAATG	1 cut(s)	727
BsrFI	RCCGGY	1 cut(s)	179
BsrGI	TGTACA	1 cut(s)	1650
BsrI	ACTGG	5 cut(s)	441, 516, 1203, 1408, 1555
BssAI	RCCGGY	1 cut(s)	179
BssECI	CCNNGG	6 cut(s)	34, 101, 963, 1281, 2298, 2410
BssHII	GCGCGC	3 cut(s)	191, 193, 195
BssMI	GATC	8 cut(s)	71, 307, 398, 1018, 1462, 1698, 1915, 2752
BssNI	GRCGYC	1 cut(s)	42
BssSI	CACGAG	3 cut(s)	1786, 2391, 2730
BssT1I	CCWWGG	3 cut(s)	963, 1281, 2410
Bst2BI	CACGAG	3 cut(s)	1786, 2391, 2730
Bst2UI	CCWGG	3 cut(s)	1025, 2300, 2433
Bst6I	CTCTTC	5 cut(s)	759, 842, 1070, 2208, 2458
BstACI	GRCGYC	1 cut(s)	42
BstAUI	TGTACA	1 cut(s)	1650
BstBAI	YACGTR	1 cut(s)	155
BstBI	TTCGAA	1 cut(s)	2479
BstC8I	GCNNGC	5 cut(s)	19, 193, 195, 197, 825
BstDEI	CTNAG	6 cut(s)	246, 876, 1500, 1569, 1635, 1729
BstDSI	CCRYGG	2 cut(s)	34, 963
BstENI	CCTNNNNNAGG	1 cut(s)	1662
BstFNI	CGCG	6 cut(s)	36, 193, 195, 197, 199, 266
BstHHI	GCGC	4 cut(s)	193, 195, 197, 199
BstKTI	GATC	8 cut(s)	74, 310, 401, 1021, 1465, 1701, 1918, 2755
BstMAI	GTCTC	1 cut(s)	1969
BstMBI	GATC	8 cut(s)	71, 307, 398, 1018, 1462, 1698, 1915, 2752
BstMCI	CGRYCG	1 cut(s)	784
BstMWI	GCNNNNNNNGC	7 cut(s)	14, 192, 1163, 1370, 1715, 1754, 2244
BstNI	CCWGG	3 cut(s)	1025, 2300, 2433
BstNSI	RCATGY	1 cut(s)	974
BstSCI	CCNGG	7 cut(s)	100, 101, 331, 362, 1023, 2298, 2431
BstSFI	CTRYAG	3 cut(s)	1263, 1371, 1662
BstSLI	GKGCMC	2 cut(s)	108, 1613
BstUI	CGCG	6 cut(s)	36, 193, 195, 197, 199, 266
BstV1I	GCAGC	1 cut(s)	1735
BstV2I	GAAGAC	1 cut(s)	878
BstX2I	RGATCY	2 cut(s)	71, 1915
BstXI	CCANNNNNNTGG	2 cut(s)	1526, 2766
BstYI	RGATCY	2 cut(s)	71, 1915
BsuRI	GGCC	9 cut(s)	106, 125, 145, 283, 962, 1536, 1863, 2431, 2688
BtgI	CCRYGG	2 cut(s)	34, 963
BtgZI	GCGATG	1 cut(s)	201
BtsI	GCAGTG	2 cut(s)	1368, 2087
BtsIMutI	CAGTG	5 cut(s)	1239, 1368, 1401, 2087, 2217
BveI	ACCTGC	1 cut(s)	1051
Cac8I	GCNNGC	5 cut(s)	19, 193, 195, 197, 825
CciI	TCATGA	2 cut(s)	814, 1594
CfoI	GCGC	4 cut(s)	193, 195, 197, 199
Cfr10I	RCCGGY	1 cut(s)	179
Cfr42I	CCGCGG	1 cut(s)	37
Cfr9I	CCCGGG	1 cut(s)	101
CpoI	CGGWCCG	1 cut(s)	360
CseI	GACGC	5 cut(s)	31, 70, 255, 846, 1037
Csp6I	GTAC	5 cut(s)	968, 1651, 1856, 2039, 2295
CspCI	CAANNNNNGTGG	4 cut(s)	1916, 1951, 2635, 2670
CspI	CGGWCCG	1 cut(s)	360
CviAII	CATG	9 cut(s)	139, 208, 815, 964, 971, 1595, 2207, 2578, 2722
CviQI	GTAC	5 cut(s)	968, 1651, 1856, 2039, 2295
DdeI	CTNAG	6 cut(s)	246, 876, 1500, 1569, 1635, 1729
DpnI	GATC	8 cut(s)	73, 309, 400, 1020, 1464, 1700, 1917, 2754
DpnII	GATC	8 cut(s)	71, 307, 398, 1018, 1462, 1698, 1915, 2752
Eam1104I	CTCTTC	5 cut(s)	759, 842, 1070, 2208, 2458
EarI	CTCTTC	5 cut(s)	759, 842, 1070, 2208, 2458
EciI	GGCGGA	2 cut(s)	320, 2253
Ecl136II	GAGCTC	3 cut(s)	234, 1423, 1709
Eco130I	CCWWGG	3 cut(s)	963, 1281, 2410
Eco147I	AGGCCT	1 cut(s)	2431
Eco24I	GRGCYC	4 cut(s)	108, 236, 1425, 1711
Eco47I	GGWCC	4 cut(s)	204, 323, 360, 1952
Eco53kI	GAGCTC	3 cut(s)	234, 1423, 1709
Eco72I	CACGTG	1 cut(s)	155
Eco88I	CYCGRG	1 cut(s)	101
EcoICRI	GAGCTC	3 cut(s)	234, 1423, 1709
EcoNI	CCTNNNNNAGG	1 cut(s)	1662
EcoRII	CCWGG	3 cut(s)	1023, 2298, 2431
EcoT14I	CCWWGG	3 cut(s)	963, 1281, 2410
EcoT22I	ATGCAT	1 cut(s)	910
EcoT38I	GRGCYC	4 cut(s)	108, 236, 1425, 1711
ErhI	CCWWGG	3 cut(s)	963, 1281, 2410
FaeI	CATG	9 cut(s)	142, 211, 818, 967, 974, 1598, 2210, 2581, 2725
FalI	AAGNNNNNCTT	2 cut(s)	1882, 1914
FaqI	GGGAC	1 cut(s)	2403
FatI	CATG	9 cut(s)	138, 207, 814, 963, 970, 1594, 2206, 2577, 2721
FauI	CCCGC	1 cut(s)	105
FbaI	TGATCA	1 cut(s)	1462
FblI	GTMKAC	1 cut(s)	159
Fnu4HI	GCNGC	9 cut(s)	22, 37, 40, 48, 168, 171, 184, 264, 1749
FriOI	GRGCYC	4 cut(s)	108, 236, 1425, 1711
Fsp4HI	GCNGC	9 cut(s)	22, 37, 40, 48, 168, 171, 184, 264, 1749
FspBI	CTAG	8 cut(s)	237, 561, 804, 1116, 1509, 1713, 2318, 2573
GlaI	GCGC	4 cut(s)	192, 194, 196, 198
GluI	GCNGC	9 cut(s)	22, 37, 40, 48, 168, 171, 184, 264, 1749
GsaI	CCCAGC	1 cut(s)	2762
GsuI	CTGGAG	1 cut(s)	61
HaeIII	GGCC	9 cut(s)	106, 125, 145, 283, 962, 1536, 1863, 2431, 2688
HapII	CCGG	6 cut(s)	102, 115, 180, 332, 363, 1458
HgaI	GACGC	5 cut(s)	31, 70, 255, 846, 1037
HhaI	GCGC	4 cut(s)	193, 195, 197, 199
Hin1I	GRCGYC	1 cut(s)	42
Hin1II	CATG	9 cut(s)	142, 211, 818, 967, 974, 1598, 2210, 2581, 2725
Hin6I	GCGC	4 cut(s)	191, 193, 195, 197
HinP1I	GCGC	4 cut(s)	191, 193, 195, 197
HincII	GTYRAC	3 cut(s)	160, 434, 2055
HindII	GTYRAC	3 cut(s)	160, 434, 2055
HindIII	AAGCTT	3 cut(s)	809, 821, 2360
HpaI	GTTAAC	1 cut(s)	2055
HpaII	CCGG	6 cut(s)	102, 115, 180, 332, 363, 1458
Hpy166II	GTNNAC	7 cut(s)	160, 434, 1611, 1630, 1952, 2055, 2143
Hpy8I	GTNNAC	7 cut(s)	160, 434, 1611, 1630, 1952, 2055, 2143
Hpy99I	CGWCG	4 cut(s)	47, 86, 271, 1835
HpyCH4IV	ACGT	1 cut(s)	154
HpyF10VI	GCNNNNNNNGC	7 cut(s)	14, 192, 1163, 1370, 1715, 1754, 2244
HpyF3I	CTNAG	6 cut(s)	246, 876, 1500, 1569, 1635, 1729
HpySE526I	ACGT	1 cut(s)	154
Hsp92I	GRCGYC	1 cut(s)	42
Hsp92II	CATG	9 cut(s)	142, 211, 818, 967, 974, 1598, 2210, 2581, 2725
HspAI	GCGC	4 cut(s)	191, 193, 195, 197
Kpn2I	TCCGGA	1 cut(s)	114
Ksp22I	TGATCA	1 cut(s)	1462
KspAI	GTTAAC	1 cut(s)	2055
KspI	CCGCGG	1 cut(s)	37
Kzo9I	GATC	8 cut(s)	71, 307, 398, 1018, 1462, 1698, 1915, 2752
LguI	GCTCTTC	1 cut(s)	2208
LmnI	GCTCC	2 cut(s)	231, 1714
Lsp1109I	GCAGC	1 cut(s)	1735
LweI	GCATC	7 cut(s)	178, 626, 895, 917, 1175, 1760, 2602
MaeI	CTAG	8 cut(s)	237, 561, 804, 1116, 1509, 1713, 2318, 2573
MaeII	ACGT	1 cut(s)	154
MaeIII	GTNAC	5 cut(s)	1049, 1303, 1399, 2009, 2368
MalI	GATC	8 cut(s)	73, 309, 400, 1020, 1464, 1700, 1917, 2754
MauBI	CGCGCGCG	2 cut(s)	193, 195
MbiI	CCGCTC	1 cut(s)	17
MboI	GATC	8 cut(s)	71, 307, 398, 1018, 1462, 1698, 1915, 2752
MfeI	CAATTG	1 cut(s)	1257
MflI	RGATCY	2 cut(s)	71, 1915
MhlI	GDGCHC	6 cut(s)	108, 236, 1425, 1613, 1711, 2737
MluCI	AATT	7 cut(s)	477, 541, 592, 1257, 1336, 2124, 2475
MlyI	GAGTC	7 cut(s)	337, 707, 1113, 1463, 1586, 2216, 2720
MmeI	TCCRAC	1 cut(s)	2168
Mph1103I	ATGCAT	1 cut(s)	910
MroI	TCCGGA	1 cut(s)	114
MseI	TTAA	1 cut(s)	2054
MslI	CAYNNNNRTG	1 cut(s)	1599
MspA1I	CMGCKG	1 cut(s)	36
MspI	CCGG	6 cut(s)	102, 115, 180, 332, 363, 1458
MspR9I	CCNGG	7 cut(s)	102, 103, 333, 364, 1025, 2300, 2433
MunI	CAATTG	1 cut(s)	1257
MvaI	CCWGG	3 cut(s)	1025, 2300, 2433
MvnI	CGCG	6 cut(s)	36, 193, 195, 197, 199, 266
MwoI	GCNNNNNNNGC	7 cut(s)	14, 192, 1163, 1370, 1715, 1754, 2244
NciI	CCSGG	4 cut(s)	102, 103, 333, 364
NcoI	CCATGG	1 cut(s)	963
NdeII	GATC	8 cut(s)	71, 307, 398, 1018, 1462, 1698, 1915, 2752
NlaIII	CATG	9 cut(s)	142, 211, 818, 967, 974, 1598, 2210, 2581, 2725
NlaIV	GGNNCC	6 cut(s)	106, 324, 1148, 1363, 1864, 1917
NmuCI	GTSAC	3 cut(s)	1049, 1399, 2009
NsiI	ATGCAT	1 cut(s)	910
NspI	RCATGY	1 cut(s)	974
NspV	TTCGAA	1 cut(s)	2479
PagI	TCATGA	2 cut(s)	814, 1594
PaqCI	CACCTGC	1 cut(s)	1051
PauI	GCGCGC	3 cut(s)	191, 193, 195
PceI	AGGCCT	1 cut(s)	2431
PciI	ACATGT	1 cut(s)	970
PciSI	GCTCTTC	1 cut(s)	2208
PcsI	WCGNNNNNNNCGW	1 cut(s)	1053
PflMI	CCANNNNNTGG	1 cut(s)	2363
PfoI	TCCNGGA	1 cut(s)	362
PkrI	GCNGC	9 cut(s)	23, 38, 41, 49, 169, 172, 185, 265, 1750
PleI	GAGTC	7 cut(s)	336, 706, 1113, 1462, 1585, 2216, 2720
PmaCI	CACGTG	1 cut(s)	155
PmlI	CACGTG	1 cut(s)	155
PpsI	GAGTC	7 cut(s)	336, 706, 1113, 1462, 1585, 2216, 2720
Ppu21I	YACGTR	1 cut(s)	155
PscI	ACATGT	1 cut(s)	970
Psp124BI	GAGCTC	3 cut(s)	236, 1425, 1711
Psp6I	CCWGG	3 cut(s)	1023, 2298, 2431
PspCI	CACGTG	1 cut(s)	155
PspFI	CCCAGC	1 cut(s)	2758
PspGI	CCWGG	3 cut(s)	1023, 2298, 2431
PspN4I	GGNNCC	6 cut(s)	106, 324, 1148, 1363, 1864, 1917
PspOMI	GGGCCC	1 cut(s)	104
PstI	CTGCAG	2 cut(s)	1375, 1666
PsuI	RGATCY	2 cut(s)	71, 1915
PteI	GCGCGC	3 cut(s)	191, 193, 195
RsaI	GTAC	5 cut(s)	969, 1652, 1857, 2040, 2296
RsaNI	GTAC	5 cut(s)	968, 1651, 1856, 2039, 2295
RseI	CAYNNNNRTG	1 cut(s)	1599
Rsr2I	CGGWCCG	1 cut(s)	360
RsrII	CGGWCCG	1 cut(s)	360
SacI	GAGCTC	3 cut(s)	236, 1425, 1711
SacII	CCGCGG	1 cut(s)	37
SalI	GTCGAC	1 cut(s)	158
SapI	GCTCTTC	1 cut(s)	2208
SaqAI	TTAA	1 cut(s)	2054
SatI	GCNGC	9 cut(s)	22, 37, 40, 48, 168, 171, 184, 264, 1749
Sau3AI	GATC	8 cut(s)	71, 307, 398, 1018, 1462, 1698, 1915, 2752
SbfI	CCTGCAGG	1 cut(s)	1666
ScaI	AGTACT	1 cut(s)	1857
SchI	GAGTC	7 cut(s)	337, 707, 1113, 1463, 1586, 2216, 2720
ScrFI	CCNGG	7 cut(s)	102, 103, 333, 364, 1025, 2300, 2433
SdaI	CCTGCAGG	1 cut(s)	1666
SduI	GDGCHC	6 cut(s)	108, 236, 1425, 1613, 1711, 2737
SfaNI	GCATC	7 cut(s)	178, 626, 895, 917, 1175, 1760, 2602
SfcI	CTRYAG	3 cut(s)	1263, 1371, 1662
Sfr303I	CCGCGG	1 cut(s)	37
SfuI	TTCGAA	1 cut(s)	2479
SgrBI	CCGCGG	1 cut(s)	37
SinI	GGWCC	4 cut(s)	204, 323, 360, 1952
SmaI	CCCGGG	1 cut(s)	103
SmiMI	CAYNNNNRTG	1 cut(s)	1599
SmlI	CTYRAG	3 cut(s)	1299, 2068, 2550
SmoI	CTYRAG	3 cut(s)	1299, 2068, 2550
SrfI	GCCCGGGC	1 cut(s)	103
Sse8387I	CCTGCAGG	1 cut(s)	1666
Sse9I	AATT	7 cut(s)	477, 541, 592, 1257, 1336, 2124, 2475
SseBI	AGGCCT	1 cut(s)	2431
SspMI	CTAG	8 cut(s)	237, 561, 804, 1116, 1509, 1713, 2318, 2573
SstI	GAGCTC	3 cut(s)	236, 1425, 1711
StuI	AGGCCT	1 cut(s)	2431
StyD4I	CCNGG	7 cut(s)	100, 101, 331, 362, 1023, 2298, 2431
StyI	CCWWGG	3 cut(s)	963, 1281, 2410
TaiI	ACGT	1 cut(s)	157
TaqI	TCGA	6 cut(s)	159, 315, 701, 911, 1056, 2479
TasI	AATT	7 cut(s)	477, 541, 592, 1257, 1336, 2124, 2475
TatI	WGTACW	2 cut(s)	1650, 1855
TauI	GCSGC	8 cut(s)	24, 39, 42, 50, 170, 173, 186, 266
Tru1I	TTAA	1 cut(s)	2054
Tru9I	TTAA	1 cut(s)	2054
TscAI	CASTG	5 cut(s)	1239, 1375, 1408, 2087, 2224
TseFI	GTSAC	3 cut(s)	1049, 1399, 2009
TseI	GCWGC	1 cut(s)	1748
Tsp45I	GTSAC	3 cut(s)	1049, 1399, 2009
TspDTI	ATGAA	6 cut(s)	803, 908, 1239, 1455, 2042, 2195
TspGWI	ACGGA	1 cut(s)	2322
TspMI	CCCGGG	1 cut(s)	101
TspRI	CASTG	5 cut(s)	1239, 1375, 1408, 2087, 2224
Van91I	CCANNNNNTGG	1 cut(s)	2363
VneI	GTGCAC	1 cut(s)	1609
VpaK11BI	GGWCC	4 cut(s)	204, 323, 360, 1952
XagI	CCTNNNNNAGG	1 cut(s)	1662
XbaI	TCTAGA	1 cut(s)	2317
XceI	RCATGY	1 cut(s)	974
XcmI	CCANNNNNNNNNTGG	1 cut(s)	214
XmaI	CCCGGG	1 cut(s)	101
XmiI	GTMKAC	1 cut(s)	159
XspI	CTAG	8 cut(s)	237, 561, 804, 1116, 1509, 1713, 2318, 2573
ZrmI	AGTACT	1 cut(s)	1857
Zsp2I	ATGCAT	1 cut(s)	910

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.