Rroxscaffold_5G00339320
ERF Family

Transducin WD40 repeat-like superfamily protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0007851
Physical Location & Seq
Forward (+)
7666914 .. 7671104
4191 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00339320.1

Sequence Viewer

Length: 2712 bp
ATGTCCGCCTTATCCGCTCGCCGCCTCAAAGACCGCGGCGGCGTCGCCGCACCCACCAAACCCGACAAGAGATCCTCCAGCGTCGGCAAAGAAAACCCGCCCGGGCCCACTTTCCGGACTTCGGCCCAGAAGCCCACCATGCGGCCCGTTCCACGTGTCGACAAGGCGGTGGCGAATGCCGGCGGCGATGCGCGTGCGCGGTGGTCCATGCCTTCTGTGGCGAAAGGTAGGAGCTCTAGCCCTTCTGAGTTTTTTAGGGTTGCCGCGTCGGGAAATGTTGGGCCGAAGAATCGGAGGGGTTCGGTGGATCGGGTCGAGAGGGGTCCGAGTCCGGGTTCGGGTTTGGGCGAGAGGGAACGGTCTGGGAGTGCAGGGAGGAGTTTGAGTAGGGGAAGAGGATCAGGGGTTAGGGATTTGGAAGTCAAAGTTGGTCAATTGGGGTTTAGGGTTTTCAGGGATTTGAAAGATGATGGTAAAATTGGGGTGAAAAAGAATGGAACTTGTGGAGAATTGGAAGTGAAATCGGTGGAGATTGAGAAGAATTTGAGTGGGACTAGGTCTAGGGTTTTGGGCAGTTGTGATGGAGTAGCTAATTTGAAAAACCCAGATGGGGTTGATGGTAGGGTTTTGGAGAGATGCAATAGTGGAAAGAGTAGAAGTAGTGATATTGGGAATCGGGCTGGTTTTGGATTGAAGGAGTCGAGTGAGAAATGTGTGAGCAATGGGAAGGCTTTGGAGGGTTTGAAGGAGAAGGGGTTGAAGGAAGAGGAAGTGAAGAGGATTGCGTCTGATATAAAGAAGACCAAGGAGATATTGGATATGAATAACCCAGATGCATCGAAGGTGATACTTTCTGATATTCAGGAGAAGATTACAGGGATTGAGAAGGCCATGGTACATGTTTCCAATGGCTCTGGTGGTAAGGTGGTGAAAGGTAATGAGCAGGATCACCAGGACGCCAAAGTGGTTGAGAACGGTCAAATTGAGAAGGTGTGTAAGGTGAAGAGTTCGGTAAAGGGTTTGAATCGTGAGGACTTGGAAGCTAGACTCTTTCCTCATCATAAGTTGATTAGAAACCGCACAGCCTTGAAAGCATCATCAGAAAGTTCTCAATGTGAAGTAGTTGAAACCAGTTGTGAATCAAAAGTGGATGAGAAGACAGTGTGCCTTATAGATGAGAACCCAATTGCCATAGAGTTCTTGGCCTCCCTGGATAATGAGCAAACTCAAGTTACAACAAGGGATGAACATGAGGATTTGGAAAATTGTGAGATTCAAGCAGTGGATGGTGCTGCCACTGCAGGAGTTGAAAAATCTTCAAAAATGGTCACTGGTAAGCAGGATGACGAGCTCATTCTCACAACTGATGAAACACTTGATGAGTCTGGTGATCAGGAGAATAGACAAGTGATCAATGATGAGGAAACTGAGGATACTAGCATTTACCAGCTCAATGGAATAGGCCAAAAGACCTCAACTGGTGGGTGGTTTATGTCTGAGGGAGAGTCGGTTCTTCTTGCTCATGATGATGGTTCGTGCACCTTCTATGATATTGTAAACTCCGAGGAAAAGGCTTTGTACAAGCCTCCTGCAGGAGTTTCACCTAATATGTGGAGAGATTGCTGGATCATCCGAGCTCCTAGTGCAGATGGTTGCTCAGGAAGGTATGTTGTGGCTGCATCTGCTGGAAACACAATGGATTCAGGTTTTTGCTCGTGGGATTTTTATGCCAAAGATGTGTGTGCTTTCCATATTGACGATGGTTTAGCCCCATCAAGGACAGTACTTGGCCCTTTGCCCGACAACATCTCATACAGAAGAAACACTTTGTCTAATCTTTTGGATCCAGAAACTCAACAATGGTGGTATAGACCTTGTGGACCTCTTATTGTCTCATCTGCCACCTGTCAGAGAGTTGTGAGAATCTATGACATTCGTGATGGTGAGCAAGTTATGAAATGGGATGTCCCGAAGCCTGTGTTAACAATGGATAACTCAAGCCCCTTGCAGTGGAGAAACAGAGGAAAAGTTGTTGTAGCTGACATTGAAACAATTTCCATCTGGGATGTGAACTCTCTCAACCCTCAACCTTTATTATCTGTTTCTTCTGCTGGTCGGAAAATCTCTGCTCTTCATGTGAATAACACTGATTCTGAACTTGGTGGCGGAGTTCGCCAAAGAGTAAGTTCAGCAGAAGCAGAAGGAAATGATGGAGTGTTCTGTACCCAGGATTCAATAAACATTCTAGACTTTCGCAATCCATCTGGTATAGGTCTGAAAATACCAAAGCTTGGTGTAACAGCACAGTCAGTTTTCTCTCGTGGAGATTCCATCTTCCTTGGCTGCCCCAATGGAAGGTCTGGATGGAAAAAACAGTCCTCTTCACAAGTGCAACAGTTTTCAATTCGAAAACAAAGGCTAATAAGCACTTACGCCTTGCCAGAGTCAAATGCTCACAGCCATCACACAGCTATTACACAAGTTTGGGGGAACTCAAACCTAGTCATGGGCGTTTGTGGATTGGGGCTGTTTGTGTTTGATGCCTTGAAGGATGACGGTGTGCCGTCTTTCACCAATGATAGTGGAAGCACTCAAAAAGATCGTGAAGTCATTGGCCCAGATGACTTGTATGCACCTTCTTTTGATTACATCGACTCTCGTGCTCTTATCATATCAAGAGATCGCCCAGCATTATGGAGGCACTTATCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005618 GO:0005623 GO:0030312 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

903

Amino Acids

98.11

Weight (kDa)

6.4

Isoelectric Point (pI)

43.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_At4g14310 PF25465 616 - 898 9.9e-157 At4g14310 8-bladed propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 2291
AccBSI CCGCTC 1 cut(s) 17
AccI GTMKAC 1 cut(s) 159
AccII CGCG 4 cut(s) 36, 193, 199, 266
AccIII TCCGGA 1 cut(s) 114
AclWI GGATC 7 cut(s) 66, 315, 406, 954, 1634, 1838, 1851
AcsI RAATTY 1 cut(s) 541
AcvI CACGTG 1 cut(s) 155
AcyI GRCGYC 2 cut(s) 42, 957
AfaI GTAC 4 cut(s) 897, 1580, 1785, 2224
AflIII ACRYGT 2 cut(s) 154, 898
AjnI CCWGG 3 cut(s) 951, 1209, 2226
AjuI GAANNNNNNNTTGG 2 cut(s) 411, 443
AloI GAACNNNNNNTCC 2 cut(s) 1494, 1526
AluBI AGCT 9 cut(s) 234, 590, 1043, 1351, 1450, 1637, 2039, 2290, 2471
AluI AGCT 9 cut(s) 234, 590, 1043, 1351, 1450, 1637, 2039, 2290, 2471
Alw21I GWGCWC 5 cut(s) 236, 1353, 1541, 1639, 2665
Alw26I GTCTC 1 cut(s) 1897
Alw44I GTGCAC 1 cut(s) 1537
AlwI GGATC 7 cut(s) 66, 315, 406, 954, 1634, 1838, 1851
Ama87I CYCGRG 1 cut(s) 101
Aor13HI TCCGGA 1 cut(s) 114
AoxI GGCC 9 cut(s) 104, 123, 143, 281, 888, 1203, 1462, 1789, 2614
ApaI GGGCCC 1 cut(s) 108
ApaLI GTGCAC 1 cut(s) 1537
ApeKI GCWGC 3 cut(s) 1292, 1676, 2343
ApoI RAATTY 1 cut(s) 541
AspLEI GCGC 2 cut(s) 193, 199
AsuC2I CCSGG 3 cut(s) 102, 103, 333
AsuHPI GGTGA 9 cut(s) 496, 856, 940, 941, 1012, 1400, 1593, 1955, 2563
AsuII TTCGAA 1 cut(s) 2407
AvaI CYCGRG 1 cut(s) 101
AvaII GGWCC 3 cut(s) 204, 323, 1880
BaeGI GKGCMC 2 cut(s) 108, 1541
BamHI GGATCC 1 cut(s) 1843
BanII GRGCYC 4 cut(s) 108, 236, 1353, 1639
BauI CACGAG 3 cut(s) 1714, 2319, 2658
BbrPI CACGTG 1 cut(s) 155
BbsI GAAGAC 2 cut(s) 806, 1163
Bbv12I GWGCWC 5 cut(s) 236, 1353, 1541, 1639, 2665
BbvI GCAGC 3 cut(s) 1279, 1663, 2330
BceAI ACGGC 1 cut(s) 2548
BcgI CGANNNNNNTGC 4 cut(s) 176, 210, 2642, 2676
BciT130I CCWGG 3 cut(s) 953, 1211, 2228
BciVI GTATCC 1 cut(s) 1426
BclI TGATCA 2 cut(s) 1390, 1410
BcnI CCSGG 3 cut(s) 102, 103, 333
BcoDI GTCTC 1 cut(s) 1897
BfaI CTAG 8 cut(s) 237, 555, 561, 1044, 1437, 1641, 2246, 2501
BfmI CTRYAG 2 cut(s) 1299, 1590
BfuI GTATCC 1 cut(s) 1426
BmcAI AGTACT 1 cut(s) 1785
Bme1390I CCNGG 6 cut(s) 102, 103, 333, 953, 1211, 2228
Bme18I GGWCC 3 cut(s) 204, 323, 1880
BmeT110I CYCGRG 1 cut(s) 101
BmiI GGNNCC 3 cut(s) 106, 324, 1845
BmrFI CCNGG 6 cut(s) 102, 103, 333, 953, 1211, 2228
BmsI GCATC 7 cut(s) 178, 626, 823, 845, 1103, 1688, 2530
BpiI GAAGAC 2 cut(s) 806, 1163
BpmI CTGGAG 1 cut(s) 61
Bpu10I CCTNAGC 1 cut(s) 1657
Bpu14I TTCGAA 1 cut(s) 2407
BpuEI CTTGAG 2 cut(s) 1212, 1981
BpuMI CCSGG 3 cut(s) 102, 103, 333
BsaAI YACGTR 1 cut(s) 155
BsaHI GRCGYC 2 cut(s) 42, 957
BsaJI CCNNGG 8 cut(s) 34, 101, 804, 891, 1209, 1563, 2226, 2338
BsaWI WCCGGW 1 cut(s) 114
BsaXI ACNNNNNCTCC 6 cut(s) 370, 400, 740, 770, 1494, 1524
Bse118I RCCGGY 1 cut(s) 179
Bse1I ACTGG 3 cut(s) 1131, 1336, 1483
Bse3DI GCAATG 1 cut(s) 727
BseAI TCCGGA 1 cut(s) 114
BseBI CCWGG 3 cut(s) 953, 1211, 2228
BseDI CCNNGG 8 cut(s) 34, 101, 804, 891, 1209, 1563, 2226, 2338
BseGI GGATG 9 cut(s) 1156, 1249, 1291, 1348, 1629, 1969, 2071, 2369, 2557
BseMI GCAATG 1 cut(s) 727
BseMII CTCAG 4 cut(s) 237, 1419, 1488, 1671
BseNI ACTGG 3 cut(s) 1131, 1336, 1483
BseRI GAGGAG 1 cut(s) 391
BseSI GKGCMC 2 cut(s) 108, 1541
BseXI GCAGC 3 cut(s) 1279, 1663, 2330
BseYI CCCAGC 1 cut(s) 2686
BsgI GTGCAG 2 cut(s) 390, 1665
Bsh1236I CGCG 4 cut(s) 36, 193, 199, 266
BshFI GGCC 9 cut(s) 106, 125, 145, 283, 890, 1205, 1464, 1791, 2616
BsiHKAI GWGCWC 5 cut(s) 236, 1353, 1541, 1639, 2665
BsiHKCI CYCGRG 1 cut(s) 101
BsiSI CCGG 4 cut(s) 102, 115, 180, 332
BslFI GGGAC 2 cut(s) 565, 1952
BsmAI GTCTC 1 cut(s) 1897
BsmFI GGGAC 2 cut(s) 565, 1952
BsmI GAATGC 1 cut(s) 181
BsnI GGCC 9 cut(s) 106, 125, 145, 283, 890, 1205, 1464, 1791, 2616
BsoBI CYCGRG 1 cut(s) 101
Bsp119I TTCGAA 1 cut(s) 2407
Bsp120I GGGCCC 1 cut(s) 104
Bsp1286I GDGCHC 6 cut(s) 108, 236, 1353, 1541, 1639, 2665
Bsp13I TCCGGA 1 cut(s) 114
Bsp1407I TGTACA 1 cut(s) 1578
Bsp19I CCATGG 1 cut(s) 891
BspANI GGCC 9 cut(s) 106, 125, 145, 283, 890, 1205, 1464, 1791, 2616
BspCNI CTCAG 4 cut(s) 238, 1420, 1489, 1670
BspEI TCCGGA 1 cut(s) 114
BspFNI CGCG 4 cut(s) 36, 193, 199, 266
BspHI TCATGA 1 cut(s) 1522
BspLI GGNNCC 3 cut(s) 106, 324, 1845
BspMAI CTGCAG 2 cut(s) 1303, 1594
BspPI GGATC 7 cut(s) 66, 315, 406, 954, 1634, 1838, 1851
BspQI GCTCTTC 1 cut(s) 2136
BspT104I TTCGAA 1 cut(s) 2407
BsrBI CCGCTC 1 cut(s) 17
BsrDI GCAATG 1 cut(s) 727
BsrFI RCCGGY 1 cut(s) 179
BsrGI TGTACA 1 cut(s) 1578
BsrI ACTGG 3 cut(s) 1131, 1336, 1483
BssAI RCCGGY 1 cut(s) 179
BssECI CCNNGG 8 cut(s) 34, 101, 804, 891, 1209, 1563, 2226, 2338
BssNI GRCGYC 2 cut(s) 42, 957
BssSI CACGAG 3 cut(s) 1714, 2319, 2658
BssT1I CCWWGG 3 cut(s) 804, 891, 2338
Bst2BI CACGAG 3 cut(s) 1714, 2319, 2658
Bst2UI CCWGG 3 cut(s) 953, 1211, 2228
Bst4CI ACNGT 8 cut(s) 360, 977, 1162, 1783, 2307, 2376, 2397, 2558
Bst6I CTCTTC 6 cut(s) 388, 759, 770, 998, 2136, 2386
BstACI GRCGYC 2 cut(s) 42, 957
BstAUI TGTACA 1 cut(s) 1578
BstBAI YACGTR 1 cut(s) 155
BstBI TTCGAA 1 cut(s) 2407
BstC8I GCNNGC 3 cut(s) 19, 181, 195
BstDEI CTNAG 4 cut(s) 246, 1428, 1497, 1657
BstDSI CCRYGG 2 cut(s) 34, 891
BstENI CCTNNNNNAGG 1 cut(s) 1590
BstF5I GGATG 9 cut(s) 1156, 1249, 1291, 1348, 1629, 1969, 2071, 2369, 2557
BstFNI CGCG 4 cut(s) 36, 193, 199, 266
BstHHI GCGC 2 cut(s) 193, 199
BstMAI GTCTC 1 cut(s) 1897
BstMWI GCNNNNNNNGC 7 cut(s) 14, 139, 1091, 1298, 1643, 1682, 2172
BstNI CCWGG 3 cut(s) 953, 1211, 2228
BstNSI RCATGY 1 cut(s) 902
BstSCI CCNGG 6 cut(s) 100, 101, 331, 951, 1209, 2226
BstSFI CTRYAG 2 cut(s) 1299, 1590
BstSLI GKGCMC 2 cut(s) 108, 1541
BstUI CGCG 4 cut(s) 36, 193, 199, 266
BstV1I GCAGC 3 cut(s) 1279, 1663, 2330
BstV2I GAAGAC 2 cut(s) 806, 1163
BstX2I RGATCY 2 cut(s) 71, 1843
BstXI CCANNNNNNTGG 2 cut(s) 1454, 2694
BstYI RGATCY 2 cut(s) 71, 1843
BsuI GTATCC 1 cut(s) 1426
BsuRI GGCC 9 cut(s) 106, 125, 145, 283, 890, 1205, 1464, 1791, 2616
BtgI CCRYGG 2 cut(s) 34, 891
BtgZI GCGATG 1 cut(s) 201
BtsCI GGATG 9 cut(s) 1156, 1249, 1291, 1348, 1629, 1969, 2071, 2369, 2557
BtsI GCAGTG 3 cut(s) 1287, 1296, 2015
BtsIMutI CAGTG 6 cut(s) 1167, 1287, 1296, 1329, 2015, 2145
Cac8I GCNNGC 3 cut(s) 19, 181, 195
CciI TCATGA 1 cut(s) 1522
CfoI GCGC 2 cut(s) 193, 199
Cfr10I RCCGGY 1 cut(s) 179
Cfr42I CCGCGG 1 cut(s) 37
Cfr9I CCCGGG 1 cut(s) 101
CseI GACGC 5 cut(s) 31, 70, 255, 774, 965
Csp6I GTAC 4 cut(s) 896, 1579, 1784, 2223
CspCI CAANNNNNGTGG 4 cut(s) 1844, 1879, 2563, 2598
CviAII CATG 8 cut(s) 139, 208, 892, 899, 1250, 1523, 2135, 2506
CviQI GTAC 4 cut(s) 896, 1579, 1784, 2223
DdeI CTNAG 4 cut(s) 246, 1428, 1497, 1657
Eam1104I CTCTTC 6 cut(s) 388, 759, 770, 998, 2136, 2386
EarI CTCTTC 6 cut(s) 388, 759, 770, 998, 2136, 2386
EciI GGCGGA 1 cut(s) 2181
Ecl136II GAGCTC 3 cut(s) 234, 1351, 1637
Eco130I CCWWGG 3 cut(s) 804, 891, 2338
Eco24I GRGCYC 4 cut(s) 108, 236, 1353, 1639
Eco47I GGWCC 3 cut(s) 204, 323, 1880
Eco53kI GAGCTC 3 cut(s) 234, 1351, 1637
Eco72I CACGTG 1 cut(s) 155
Eco88I CYCGRG 1 cut(s) 101
EcoICRI GAGCTC 3 cut(s) 234, 1351, 1637
EcoNI CCTNNNNNAGG 1 cut(s) 1590
EcoRII CCWGG 3 cut(s) 951, 1209, 2226
EcoT14I CCWWGG 3 cut(s) 804, 891, 2338
EcoT22I ATGCAT 1 cut(s) 838
EcoT38I GRGCYC 4 cut(s) 108, 236, 1353, 1639
ErhI CCWWGG 3 cut(s) 804, 891, 2338
FaeI CATG 8 cut(s) 142, 211, 895, 902, 1253, 1526, 2138, 2509
FalI AAGNNNNNCTT 2 cut(s) 1810, 1842
FaqI GGGAC 2 cut(s) 565, 1952
FatI CATG 8 cut(s) 138, 207, 891, 898, 1249, 1522, 2134, 2505
FauI CCCGC 1 cut(s) 105
FbaI TGATCA 2 cut(s) 1390, 1410
FblI GTMKAC 1 cut(s) 159
FokI GGATG 9 cut(s) 1163, 1256, 1298, 1355, 1616, 1976, 2078, 2376, 2564
FriOI GRGCYC 4 cut(s) 108, 236, 1353, 1639
FspBI CTAG 8 cut(s) 237, 555, 561, 1044, 1437, 1641, 2246, 2501
GlaI GCGC 2 cut(s) 192, 198
GsaI CCCAGC 1 cut(s) 2690
GsuI CTGGAG 1 cut(s) 61
HaeIII GGCC 9 cut(s) 106, 125, 145, 283, 890, 1205, 1464, 1791, 2616
HapII CCGG 4 cut(s) 102, 115, 180, 332
HgaI GACGC 5 cut(s) 31, 70, 255, 774, 965
HhaI GCGC 2 cut(s) 193, 199
Hin1I GRCGYC 2 cut(s) 42, 957
Hin1II CATG 8 cut(s) 142, 211, 895, 902, 1253, 1526, 2138, 2509
Hin6I GCGC 2 cut(s) 191, 197
HinP1I GCGC 2 cut(s) 191, 197
HincII GTYRAC 2 cut(s) 160, 1983
HindII GTYRAC 2 cut(s) 160, 1983
HindIII AAGCTT 1 cut(s) 2288
HpaI GTTAAC 1 cut(s) 1983
HpaII CCGG 4 cut(s) 102, 115, 180, 332
HphI GGTGA 9 cut(s) 496, 856, 940, 941, 1012, 1400, 1593, 1955, 2563
Hpy166II GTNNAC 6 cut(s) 160, 1539, 1558, 1880, 1983, 2071
Hpy8I GTNNAC 6 cut(s) 160, 1539, 1558, 1880, 1983, 2071
Hpy99I CGWCG 3 cut(s) 47, 86, 271
HpyCH4III ACNGT 8 cut(s) 360, 977, 1162, 1783, 2307, 2376, 2397, 2558
HpyCH4IV ACGT 1 cut(s) 154
HpyF10VI GCNNNNNNNGC 7 cut(s) 14, 139, 1091, 1298, 1643, 1682, 2172
HpyF3I CTNAG 4 cut(s) 246, 1428, 1497, 1657
HpySE526I ACGT 1 cut(s) 154
Hsp92I GRCGYC 2 cut(s) 42, 957
Hsp92II CATG 8 cut(s) 142, 211, 895, 902, 1253, 1526, 2138, 2509
HspAI GCGC 2 cut(s) 191, 197
Kpn2I TCCGGA 1 cut(s) 114
KroI GCCGGC 1 cut(s) 179
KroNI GCCGGC 1 cut(s) 181
Ksp22I TGATCA 2 cut(s) 1390, 1410
KspAI GTTAAC 1 cut(s) 1983
KspI CCGCGG 1 cut(s) 37
LguI GCTCTTC 1 cut(s) 2136
LmnI GCTCC 2 cut(s) 231, 1642
Lsp1109I GCAGC 3 cut(s) 1279, 1663, 2330
LweI GCATC 7 cut(s) 178, 626, 823, 845, 1103, 1688, 2530
MaeI CTAG 8 cut(s) 237, 555, 561, 1044, 1437, 1641, 2246, 2501
MaeII ACGT 1 cut(s) 154
MaeIII GTNAC 3 cut(s) 1231, 1327, 2296
MbiI CCGCTC 1 cut(s) 17
MfeI CAATTG 2 cut(s) 434, 1185
MflI RGATCY 2 cut(s) 71, 1843
MhlI GDGCHC 6 cut(s) 108, 236, 1353, 1541, 1639, 2665
MlyI GAGTC 7 cut(s) 337, 707, 1041, 1391, 1514, 2453, 2648
MmeI TCCRAC 1 cut(s) 2096
Mph1103I ATGCAT 1 cut(s) 838
MroI TCCGGA 1 cut(s) 114
MroNI GCCGGC 1 cut(s) 179
MseI TTAA 1 cut(s) 1982
MslI CAYNNNNRTG 1 cut(s) 1527
MspA1I CMGCKG 1 cut(s) 36
MspI CCGG 4 cut(s) 102, 115, 180, 332
MspR9I CCNGG 6 cut(s) 102, 103, 333, 953, 1211, 2228
MunI CAATTG 2 cut(s) 434, 1185
Mva1269I GAATGC 1 cut(s) 181
MvaI CCWGG 3 cut(s) 953, 1211, 2228
MvnI CGCG 4 cut(s) 36, 193, 199, 266
MwoI GCNNNNNNNGC 7 cut(s) 14, 139, 1091, 1298, 1643, 1682, 2172
NaeI GCCGGC 1 cut(s) 181
NciI CCSGG 3 cut(s) 102, 103, 333
NcoI CCATGG 1 cut(s) 891
NgoMIV GCCGGC 1 cut(s) 179
NlaIII CATG 8 cut(s) 142, 211, 895, 902, 1253, 1526, 2138, 2509
NlaIV GGNNCC 3 cut(s) 106, 324, 1845
NmuCI GTSAC 1 cut(s) 1327
NsiI ATGCAT 1 cut(s) 838
NspI RCATGY 1 cut(s) 902
NspV TTCGAA 1 cut(s) 2407
PagI TCATGA 1 cut(s) 1522
PciI ACATGT 1 cut(s) 898
PciSI GCTCTTC 1 cut(s) 2136
PctI GAATGC 1 cut(s) 181
PdiI GCCGGC 1 cut(s) 181
PflFI GACNNNGTC 1 cut(s) 556
PflMI CCANNNNNTGG 1 cut(s) 2291
PleI GAGTC 7 cut(s) 336, 706, 1041, 1390, 1513, 2452, 2648
PmaCI CACGTG 1 cut(s) 155
PmlI CACGTG 1 cut(s) 155
PpsI GAGTC 7 cut(s) 336, 706, 1041, 1390, 1513, 2452, 2648
Ppu21I YACGTR 1 cut(s) 155
PscI ACATGT 1 cut(s) 898
Psp124BI GAGCTC 3 cut(s) 236, 1353, 1639
Psp6I CCWGG 3 cut(s) 951, 1209, 2226
PspCI CACGTG 1 cut(s) 155
PspFI CCCAGC 1 cut(s) 2686
PspGI CCWGG 3 cut(s) 951, 1209, 2226
PspN4I GGNNCC 3 cut(s) 106, 324, 1845
PspOMI GGGCCC 1 cut(s) 104
PstI CTGCAG 2 cut(s) 1303, 1594
PsuI RGATCY 2 cut(s) 71, 1843
PsyI GACNNNGTC 1 cut(s) 556
RsaI GTAC 4 cut(s) 897, 1580, 1785, 2224
RsaNI GTAC 4 cut(s) 896, 1579, 1784, 2223
RseI CAYNNNNRTG 1 cut(s) 1527
SacI GAGCTC 3 cut(s) 236, 1353, 1639
SacII CCGCGG 1 cut(s) 37
SalI GTCGAC 1 cut(s) 158
SapI GCTCTTC 1 cut(s) 2136
SaqAI TTAA 1 cut(s) 1982
SbfI CCTGCAGG 1 cut(s) 1594
ScaI AGTACT 1 cut(s) 1785
SchI GAGTC 7 cut(s) 337, 707, 1041, 1391, 1514, 2453, 2648
ScrFI CCNGG 6 cut(s) 102, 103, 333, 953, 1211, 2228
SdaI CCTGCAGG 1 cut(s) 1594
SduI GDGCHC 6 cut(s) 108, 236, 1353, 1541, 1639, 2665
SfaNI GCATC 7 cut(s) 178, 626, 823, 845, 1103, 1688, 2530
SfcI CTRYAG 2 cut(s) 1299, 1590
Sfr303I CCGCGG 1 cut(s) 37
SfuI TTCGAA 1 cut(s) 2407
SgrBI CCGCGG 1 cut(s) 37
SinI GGWCC 3 cut(s) 204, 323, 1880
SmaI CCCGGG 1 cut(s) 103
SmiMI CAYNNNNRTG 1 cut(s) 1527
SmlI CTYRAG 2 cut(s) 1227, 1996
SmoI CTYRAG 2 cut(s) 1227, 1996
SrfI GCCCGGGC 1 cut(s) 103
Sse8387I CCTGCAGG 1 cut(s) 1594
SspMI CTAG 8 cut(s) 237, 555, 561, 1044, 1437, 1641, 2246, 2501
SstI GAGCTC 3 cut(s) 236, 1353, 1639
StyD4I CCNGG 6 cut(s) 100, 101, 331, 951, 1209, 2226
StyI CCWWGG 3 cut(s) 804, 891, 2338
TaaI ACNGT 8 cut(s) 360, 977, 1162, 1783, 2307, 2376, 2397, 2558
TaiI ACGT 1 cut(s) 157
TaqI TCGA 6 cut(s) 159, 315, 701, 839, 2407, 2652
TatI WGTACW 2 cut(s) 1578, 1783
TauI GCSGC 7 cut(s) 24, 39, 42, 50, 145, 186, 266
Tru1I TTAA 1 cut(s) 1982
Tru9I TTAA 1 cut(s) 1982
TscAI CASTG 6 cut(s) 1167, 1287, 1303, 1336, 2015, 2152
TseFI GTSAC 1 cut(s) 1327
TseI GCWGC 3 cut(s) 1292, 1676, 2343
Tsp45I GTSAC 1 cut(s) 1327
TspDTI ATGAA 5 cut(s) 836, 1260, 1383, 1970, 2123
TspMI CCCGGG 1 cut(s) 101
TspRI CASTG 6 cut(s) 1167, 1287, 1303, 1336, 2015, 2152
Tth111I GACNNNGTC 1 cut(s) 556
Van91I CCANNNNNTGG 1 cut(s) 2291
VneI GTGCAC 1 cut(s) 1537
VpaK11BI GGWCC 3 cut(s) 204, 323, 1880
XagI CCTNNNNNAGG 1 cut(s) 1590
XapI RAATTY 1 cut(s) 541
XbaI TCTAGA 1 cut(s) 2245
XceI RCATGY 1 cut(s) 902
XcmI CCANNNNNNNNNTGG 4 cut(s) 214, 811, 1198, 1757
XmaI CCCGGG 1 cut(s) 101
XmiI GTMKAC 1 cut(s) 159
XspI CTAG 8 cut(s) 237, 555, 561, 1044, 1437, 1641, 2246, 2501
ZrmI AGTACT 1 cut(s) 1785
Zsp2I ATGCAT 1 cut(s) 838
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.