Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0001998

Physical Location & Seq

Genomic Coordinates Forward (+)

6806695 .. 6811507

Gene Structure 4813 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g07440.t5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2394 bp

ATGTTCGGTTCCATATTACCCTTGCCAGCTCCTCCTACCGATGGAAACTTGGGGCCACTTCCGCTCTCGCAGGTCACTGAAGCGAAGACTGAAGAGACTGAGTTGAATGAGGAGCTGAACAGAGCCAACTCGGTGCCTGCTCCGGTTGCTACGCATACTAGGACGATCGGTATCATACATCCTCCTCCGGATATCAGAAACATTGTCGACAAAACCTCCCAATTTGTGGCAAAGAACGGACCCGACTTTGAGAAGAGGATTATAGCTAGTAATGCCGGAAATCCAAAGTTCAAGTTTTTGATTTCCTCAGATCCGTACCATGCCTATTATCAGCACCGGTTGTCTGAATTTCGAGCCCAGGTTCAGTCTGGCCAGCAACCTTCGTCGGAGCCTGATGATACCGCTGCACCTGAAACTGGCGCGCCAGCTCCAGCTGCTGATGGTGAAGTGGAAGCAGCTAAGCCTGATCCATCTGCCCCGTTTAGACCGGTACGAAAAGTTCTTGAACCACCAGAAGCTGAGCAGTATACTGTTAGGCTTCCAGAAGGGATTACTGGCGAAGAATTGGATGTTATTAAGCTTACGGCCCAGTTTGTAGCTCGAAATGGGAAATCATTTTTGAATGGATTGTCAAACAGAGAGAACAATAACCCCCAGTTCCATTTTCTGAAGCCTACCCATAGTATGTTCATGTTTTTCACTTCCCTGGCTGATGCATATTCAAAGGTCTTGATGCCTCCAAAAGGTTTGACGGAGAAGCTTAAGAACAGTGTTGCAGACATGACAACTGTGCTTGAACGCTGTGTGCATCGGCTGGAGTGGGAGCGATCTCAAGAGCAGGCAAGGCAGAAGGCTGAAGATGAGATAGAACAGGAAAGGATACAAATGGCTATGATTGATTGGCATGATTTTGTTGTGGTTGAAACAATAGACTTTGCTGATGATGAGGATGAGGATTTACCTCCTCCAATGACCCTTGAGGAGGTTATTAGAAGAAGCAAGGTTACAGATATGGAAGAAGATATTATTGAGCCTGGGAAGGAGGTGGAAATGGAAATGGATGAAGAAGAAATGCAGCTCGTTGAAGAGGGCATGAGGCAATCAAGACTTGAAGAGAACAATGAGAAGAAGGTAACAGATGATCCTGAACCCCCAATGAGAATTGTGAAGAACTGGAAGAGACCTGAGGAGAGGATTCCTGCCGAAAGAGATCCAACAAAGGTTGTCATCTCCCCGATTACTGGGGAGCTTATCCCTATCAATGAGATGTCTGAACACATGAGGATTTCCCTCATTGATCCAAAATACAAAGAGCAAAAAGAAAGGATGTTTGCTAAGATTAGGGAGACTACTCTGGCTCAGGATGATGAAATCTCAAGGAACATTGTGGGCCTTGCACGGACCCGTCCGGATATTTTTGGTACTACAGAAGAAGAAGTTTCTAATGCTGTCAAGGCTGAGATTGAGAAAAAGAAAGATGAGCAACCAAAGCAGGTCATATGGGACGGTCACACCGGAAGCATTGGCCGCACAGCGAATCAGGCCATGTCACAGAATATCAATGGAGAGGATCAGAACGATGTTAACAATCTTCCTGGTCCAGCAGCGCCTCCTCCAAGACCTGGTGTGCCTTCAATTCGACCCCTTCCCCCACCACCAGGTCTCGCCTTGAATCTTCCTCGTGTTCCTCCAAACACAGTCCAGTATCCTGCTCCATCTAGTGGTGGCCTCCCAGTACCTCAACTGAGGCCCCCAGTCCAATATTCATCGGTTCGACCACCTGGACCTCCAATGCCCATGAGTTCTGGACAGCAGTCACTCATGGTGAATCGGCCACCTCCTATGCATCCATCAATGTCTATGAATGCTCCCAGTAATCCTGTACCACCTCCACCTGGTTCTCAGTTTACACCTATGCAAGTTCCCAGACCTTATATGCATCATCCTGTTCCACCACCTACAATGCAAATGATGCCTCCACCACCTATGCCTCATGGAATGATGCCTCCGCCGCCACCACCTGAGGAAGCTCCTCCTCCGCTCCCAGAAGAACCTGAGCCAAAGCGGCAGAAGCTTGATGACTCCATGCTTACTGCAGAAGATAAGTTTTTAGCGCAGCATCCGGGGCCTGTTCGTATCACTGTATCTGTTCCCAATGTTGATGAAGGCAATCTTAAAGGACAAGTTTTGGAGATCACAGTGCAGTCTTTATCTGAAACTGTTGGAAGTCTGAAAGAGAAAATTTCTGGGGAGATCCAGCTTCCGGCAAACAAACAGAAATTGAGTGGAAAACCTGGCTTTCTCAAGGACAATTTGTCTCTTGCGTATTACAATGTTGGAGCAGGAGAAACACTTGCTCTTTCATTGAGAGAACGTGGTGGTAGAAAGCGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000245 GO:0000375 GO:0000377 GO:0000381 GO:0000389 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005684 GO:0005686 GO:0006139 GO:0006376 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0010468 GO:0016043 GO:0016070 GO:0016071 GO:0019219 GO:0019222 GO:0022607 GO:0022613 GO:0022618 GO:0030532 GO:0031323 GO:0032991 GO:0034622 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043484 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0048024 GO:0050684 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065003 GO:0065007 GO:0071004 GO:0071010 GO:0071013 GO:0071704 GO:0071826 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:0097525 GO:0120114 GO:1901360 GO:1901363 GO:1902494 GO:1903311 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

PRP21_like_P Surp ubiquitin

Protein Analysis

798

Amino Acids

88.48

Weight (kDa)

5.12

Isoelectric Point (pI)

60.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Surp	PF01805	66 - 117	3.2e-20	Surp module
Surp	PF01805	189 - 240	2.1e-17	Surp module
PRP21_like_P	PF12230	259 - 467	2e-56	Pre-mRNA splicing factor PRP21 like protein
ubiquitin	PF00240	725 - 792	4.3e-08	Ubiquitin family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001998)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G14650 AT1G14650 AT1G14650
fragaria_vesca	FvH4_4g07440 FvH4_4g07440 FvH4_4g07440 FvH4_4g07440 FvH4_4g07440 FvH4_4g07440 FvH4_4g07440 FvH4_4g07440 FvH4_4g07440 FvH4_4g07440 FvH4_4g07440 FvH4_4g07440 FvH4_4g07440 FvH4_4g07440
malus_domestica	MD13G1244100.v1.1 MD16G1250800.v1.1
prunus_persica	Prupe.1G077400_v2.0.a1 Prupe.1G077400_v2.0.a1 Prupe.1G077400_v2.0.a1 Prupe.1G077400_v2.0.a1 Prupe.1G077400_v2.0.a1 Prupe.1G077400_v2.0.a1 Prupe.1G077400_v2.0.a1 Prupe.1G077400_v2.0.a1 Prupe.1G077400_v2.0.a1 Prupe.1G077400_v2.0.a1 Prupe.1G077400_v2.0.a1
pyrus_communis	pycom13g21530 pycom16g21040
rosa_chinensis	RchiOBHm_Chr4g0399901
rosa_laevigata	RLG00000009234
rosa_multiflora	Rmu_co8505131.1_g000001 Rmu_sc0014676.1_g000002
rosa_roxburghii	Rroxscaffold_5G00344760
rosa_rugosa	Rorug04G0020000 Rorug04G0020100 Rorug04G0020200 Rorug04G0020200
rosa_samantha	Rh4AG097000 Rh4BG094600 Rh4CG106100
rosa_wichuraiana	Rw4G008020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	61, 1483
AccB1I	GGYRCC	1 cut(s)	133
AccB7I	CCANNNNNTGG	3 cut(s)	226, 1622, 1721
AccBSI	CCGCTC	2 cut(s)	64, 2041
AccI	GTMKAC	2 cut(s)	207, 527
AccII	CGCG	1 cut(s)	422
AccIII	TCCGGA	2 cut(s)	187, 1408
AciI	CCGC	8 cut(s)	62, 402, 1528, 2009, 2012, 2039, 2065, 2389
AclWI	GGATC	7 cut(s)	305, 461, 1136, 1205, 1292, 1578, 2248
AcoI	YGGCCR	3 cut(s)	370, 1525, 1832
AcsI	RAATTY	2 cut(s)	347, 2241
AcuI	CTGAAG	4 cut(s)	99, 111, 689, 876
AfaI	GTAC	5 cut(s)	317, 492, 1423, 1737, 1884
AflII	CTTAAG	1 cut(s)	761
AgeI	ACCGGT	2 cut(s)	336, 487
AhdI	GACNNNNNGTC	1 cut(s)	2314
AjnI	CCWGG	9 cut(s)	357, 705, 1033, 1594, 1621, 1657, 1780, 1894, 2293
Alw26I	GTCTC	5 cut(s)	89, 1174, 1340, 1667, 2322
AlwI	GGATC	7 cut(s)	305, 461, 1136, 1205, 1292, 1578, 2248
AlwNI	CAGNNNCTG	2 cut(s)	437, 518
Aor13HI	TCCGGA	2 cut(s)	187, 1408
ApeKI	GCWGC	6 cut(s)	404, 434, 455, 1075, 1604, 2116
ApoI	RAATTY	2 cut(s)	347, 2241
AscI	GGCGCGCC	1 cut(s)	420
AsiGI	ACCGGT	2 cut(s)	336, 487
AspLEI	GCGC	4 cut(s)	422, 424, 1609, 2116
AspS9I	GGNCC	9 cut(s)	53, 239, 586, 1390, 1401, 1598, 1749, 1784, 2126
AsuC2I	CCSGG	1 cut(s)	2124
AsuHPI	GGTGA	2 cut(s)	455, 1837
AvaII	GGWCC	4 cut(s)	239, 1401, 1598, 1784
AxyI	CCTNAGG	2 cut(s)	1185, 2022
BalI	TGGCCA	1 cut(s)	372
BanI	GGYRCC	1 cut(s)	133
BanII	GRGCYC	1 cut(s)	358
BarI	GAAGNNNNNNTAC	2 cut(s)	988, 1020
BauI	CACGAG	1 cut(s)	1680
BbsI	GAAGAC	1 cut(s)	92
BbvI	GCAGC	6 cut(s)	391, 421, 467, 1087, 1616, 2128
BccI	CCATC	5 cut(s)	35, 434, 478, 1723, 1858
BceAI	ACGGC	1 cut(s)	600
BciT130I	CCWGG	9 cut(s)	359, 707, 1035, 1596, 1623, 1659, 1782, 1896, 2295
BciVI	GTATCC	2 cut(s)	873, 1716
BcnI	CCSGG	1 cut(s)	2124
BcoDI	GTCTC	5 cut(s)	89, 1174, 1340, 1667, 2322
BfaI	CTAG	3 cut(s)	159, 267, 1719
BfmI	CTRYAG	2 cut(s)	1425, 2094
BfoI	RGCGCY	1 cut(s)	1610
BfrI	CTTAAG	1 cut(s)	761
BfuAI	ACCTGC	2 cut(s)	61, 1483
BfuI	GTATCC	2 cut(s)	873, 1716
BglI	GCCNNNNNGGC	1 cut(s)	2065
BisI	GCNGC	9 cut(s)	405, 435, 456, 1076, 1528, 1605, 2012, 2066, 2117
BlpI	GCTNAGC	2 cut(s)	459, 519
BlsI	GCNGC	9 cut(s)	406, 436, 457, 1077, 1529, 1606, 2013, 2067, 2118
Bme18I	GGWCC	4 cut(s)	239, 1401, 1598, 1784
BmeRI	GACNNNNNGTC	1 cut(s)	2314
BmgT120I	GGNCC	9 cut(s)	53, 239, 586, 1390, 1401, 1598, 1749, 1784, 2126
BmiI	GGNNCC	8 cut(s)	10, 54, 135, 241, 390, 1403, 1751, 2127
BmrI	ACTGGG	6 cut(s)	583, 649, 1251, 1727, 1748, 1866
BmsI	GCATC	8 cut(s)	703, 723, 817, 1855, 1948, 1962, 1992, 2128
BmuI	ACTGGG	6 cut(s)	583, 649, 1251, 1727, 1748, 1866
BoxI	GACNNNNGTC	1 cut(s)	1813
BpiI	GAAGAC	1 cut(s)	92
BpmI	CTGGAG	2 cut(s)	414, 836
Bpu10I	CCTNAGC	2 cut(s)	1359, 2055
Bpu1102I	GCTNAGC	2 cut(s)	459, 519
BpuEI	CTTGAG	4 cut(s)	816, 998, 1360, 2288
BpuMI	CCSGG	1 cut(s)	2124
BsaBI	GATNNNNATC	1 cut(s)	170
BsaI	GGTCTC	2 cut(s)	1174, 1667
BsaJI	CCNNGG	4 cut(s)	357, 705, 1034, 2123
BsaWI	WCCGGW	6 cut(s)	142, 187, 336, 487, 1408, 1514
BsaXI	ACNNNNNCTCC	2 cut(s)	200, 230
Bse118I	RCCGGY	2 cut(s)	336, 487
Bse21I	CCTNAGG	2 cut(s)	1185, 2022
Bse8I	GATNNNNATC	1 cut(s)	170
BseAI	TCCGGA	2 cut(s)	187, 1408
BseBI	CCWGG	9 cut(s)	359, 707, 1035, 1596, 1623, 1659, 1782, 1896, 2295
BseDI	CCNNGG	4 cut(s)	357, 705, 1034, 2123
BseGI	GGATG	9 cut(s)	178, 574, 955, 1066, 1332, 1369, 1846, 1942, 2119
BseJI	GATNNNNATC	1 cut(s)	170
BsePI	GCGCGC	1 cut(s)	420
BseRI	GAGGAG	9 cut(s)	21, 125, 174, 954, 995, 1202, 1602, 2022, 2025
BseXI	GCAGC	6 cut(s)	391, 421, 467, 1087, 1616, 2128
BsgI	GTGCAG	2 cut(s)	390, 2222
Bsh1236I	CGCG	1 cut(s)	422
Bsh1285I	CGRYCG	1 cut(s)	168
BshNI	GGYRCC	1 cut(s)	133
BshTI	ACCGGT	2 cut(s)	336, 487
BsiEI	CGRYCG	1 cut(s)	168
BsiSI	CCGG	9 cut(s)	143, 188, 276, 337, 488, 1409, 1515, 2123, 2264
BslFI	GGGAC	1 cut(s)	1517
BsmAI	GTCTC	5 cut(s)	89, 1174, 1340, 1667, 2322
BsmFI	GGGAC	1 cut(s)	1517
BsmI	GAATGC	1 cut(s)	1870
Bso31I	GGTCTC	2 cut(s)	1174, 1667
Bsp1286I	GDGCHC	1 cut(s)	358
Bsp13I	TCCGGA	2 cut(s)	187, 1408
Bsp1720I	GCTNAGC	2 cut(s)	459, 519
BspACI	CCGC	8 cut(s)	62, 402, 1528, 2009, 2012, 2039, 2065, 2389
BspEI	TCCGGA	2 cut(s)	187, 1408
BspFNI	CGCG	1 cut(s)	422
BspLI	GGNNCC	8 cut(s)	10, 54, 135, 241, 390, 1403, 1751, 2127
BspMAI	CTGCAG	1 cut(s)	2098
BspMI	ACCTGC	2 cut(s)	61, 1483
BspPI	GGATC	7 cut(s)	305, 461, 1136, 1205, 1292, 1578, 2248
BspT107I	GGYRCC	1 cut(s)	133
BspTI	CTTAAG	1 cut(s)	761
BspTNI	GGTCTC	2 cut(s)	1174, 1667
BsrBI	CCGCTC	2 cut(s)	64, 2041
BsrFI	RCCGGY	2 cut(s)	336, 487
BssAI	RCCGGY	2 cut(s)	336, 487
BssECI	CCNNGG	4 cut(s)	357, 705, 1034, 2123
BssHII	GCGCGC	1 cut(s)	420
BssNAI	GTATAC	1 cut(s)	528
BssSI	CACGAG	1 cut(s)	1680
Bst1107I	GTATAC	1 cut(s)	528
Bst2BI	CACGAG	1 cut(s)	1680
Bst2UI	CCWGG	9 cut(s)	359, 707, 1035, 1596, 1623, 1659, 1782, 1896, 2295
Bst4CI	ACNGT	8 cut(s)	532, 770, 790, 1508, 1699, 2143, 2200, 2221
Bst6I	CTCTTC	5 cut(s)	87, 248, 1080, 1107, 1172
BstAFI	CTTAAG	1 cut(s)	761
BstAPI	GCANNNNNTGC	1 cut(s)	1972
BstC8I	GCNNGC	6 cut(s)	27, 138, 374, 422, 426, 840
BstENI	CCTNNNNNAGG	2 cut(s)	741, 980
BstF5I	GGATG	9 cut(s)	178, 574, 955, 1066, 1332, 1369, 1846, 1942, 2119
BstFNI	CGCG	1 cut(s)	422
BstH2I	RGCGCY	1 cut(s)	1610
BstHHI	GCGC	4 cut(s)	422, 424, 1609, 2116
BstMAI	GTCTC	5 cut(s)	89, 1174, 1340, 1667, 2322
BstMCI	CGRYCG	1 cut(s)	168
BstNI	CCWGG	9 cut(s)	359, 707, 1035, 1596, 1623, 1659, 1782, 1896, 2295
BstPAI	GACNNNNGTC	1 cut(s)	1813
BstSFI	CTRYAG	2 cut(s)	1425, 2094
BstUI	CGCG	1 cut(s)	422
BstV1I	GCAGC	6 cut(s)	391, 421, 467, 1087, 1616, 2128
BstV2I	GAAGAC	1 cut(s)	92
BstX2I	RGATCY	3 cut(s)	310, 1210, 2253
BstYI	RGATCY	3 cut(s)	310, 1210, 2253
BstZ17I	GTATAC	1 cut(s)	528
Bsu36I	CCTNAGG	2 cut(s)	1185, 2022
BsuI	GTATCC	2 cut(s)	873, 1716
BtsCI	GGATG	9 cut(s)	178, 574, 955, 1066, 1332, 1369, 1846, 1942, 2119
BtsIMutI	CAGTG	4 cut(s)	75, 775, 2139, 2205
BveI	ACCTGC	2 cut(s)	61, 1483
Cac8I	GCNNGC	6 cut(s)	27, 138, 374, 422, 426, 840
CaiI	CAGNNNCTG	2 cut(s)	437, 518
CfoI	GCGC	4 cut(s)	422, 424, 1609, 2116
Cfr10I	RCCGGY	2 cut(s)	336, 487
Cfr13I	GGNCC	9 cut(s)	53, 239, 586, 1390, 1401, 1598, 1749, 1784, 2126
CsiI	ACCWGGT	3 cut(s)	1621, 1657, 1894
Csp6I	GTAC	5 cut(s)	316, 491, 1422, 1736, 1883
CspAI	ACCGGT	2 cut(s)	336, 487
CviQI	GTAC	5 cut(s)	316, 491, 1422, 1736, 1883
DriI	GACNNNNNGTC	1 cut(s)	2314
EaeI	YGGCCR	3 cut(s)	370, 1525, 1832
Eam1104I	CTCTTC	5 cut(s)	87, 248, 1080, 1107, 1172
Eam1105I	GACNNNNNGTC	1 cut(s)	2314
EarI	CTCTTC	5 cut(s)	87, 248, 1080, 1107, 1172
EciI	GGCGGA	1 cut(s)	1998
Eco24I	GRGCYC	1 cut(s)	358
Eco31I	GGTCTC	2 cut(s)	1174, 1667
Eco32I	GATATC	1 cut(s)	193
Eco47I	GGWCC	4 cut(s)	239, 1401, 1598, 1784
Eco57I	CTGAAG	4 cut(s)	99, 111, 689, 876
Eco81I	CCTNAGG	2 cut(s)	1185, 2022
EcoNI	CCTNNNNNAGG	2 cut(s)	741, 980
EcoO109I	RGGNCCY	2 cut(s)	1749, 2126
EcoRII	CCWGG	9 cut(s)	357, 705, 1033, 1594, 1621, 1657, 1780, 1894, 2293
EcoRV	GATATC	1 cut(s)	193
EcoT22I	ATGCAT	3 cut(s)	718, 1848, 1941
EcoT38I	GRGCYC	1 cut(s)	358
FalI	AAGNNNNNCTT	2 cut(s)	2157, 2189
FaqI	GGGAC	1 cut(s)	1517
FauNDI	CATATG	1 cut(s)	1499
FblI	GTMKAC	2 cut(s)	207, 527
Fnu4HI	GCNGC	9 cut(s)	405, 435, 456, 1076, 1528, 1605, 2012, 2066, 2117
FokI	GGATG	9 cut(s)	165, 581, 962, 1073, 1339, 1376, 1833, 1929, 2106
FriOI	GRGCYC	1 cut(s)	358
Fsp4HI	GCNGC	9 cut(s)	405, 435, 456, 1076, 1528, 1605, 2012, 2066, 2117
FspBI	CTAG	3 cut(s)	159, 267, 1719
GlaI	GCGC	4 cut(s)	421, 423, 1608, 2115
GluI	GCNGC	9 cut(s)	405, 435, 456, 1076, 1528, 1605, 2012, 2066, 2117
GsuI	CTGGAG	2 cut(s)	414, 836
HaeII	RGCGCY	1 cut(s)	1610
HapII	CCGG	9 cut(s)	143, 188, 276, 337, 488, 1409, 1515, 2123, 2264
HhaI	GCGC	4 cut(s)	422, 424, 1609, 2116
Hin6I	GCGC	4 cut(s)	420, 422, 1607, 2114
HinP1I	GCGC	4 cut(s)	420, 422, 1607, 2114
HincII	GTYRAC	2 cut(s)	208, 1585
HindII	GTYRAC	2 cut(s)	208, 1585
HindIII	AAGCTT	3 cut(s)	578, 758, 2072
HinfI	GANTC	5 cut(s)	1195, 1537, 1672, 1828, 2081
HpaI	GTTAAC	1 cut(s)	1585
HpaII	CCGG	9 cut(s)	143, 188, 276, 337, 488, 1409, 1515, 2123, 2264
HphI	GGTGA	2 cut(s)	455, 1837
Hpy166II	GTNNAC	4 cut(s)	208, 528, 1585, 1908
Hpy188I	TCNGA	9 cut(s)	197, 310, 346, 388, 669, 1273, 1575, 2215, 2232
Hpy8I	GTNNAC	4 cut(s)	208, 528, 1585, 1908
Hpy99I	CGWCG	1 cut(s)	388
HpyAV	CCTTC	8 cut(s)	390, 539, 844, 1033, 1123, 1641, 1655, 2159
HpyCH4III	ACNGT	8 cut(s)	532, 770, 790, 1508, 1699, 2143, 2200, 2221
HpyCH4IV	ACGT	1 cut(s)	2374
HpySE526I	ACGT	1 cut(s)	2374
HspAI	GCGC	4 cut(s)	420, 422, 1607, 2114
Kpn2I	TCCGGA	2 cut(s)	187, 1408
KspAI	GTTAAC	1 cut(s)	1585
Lsp1109I	GCAGC	6 cut(s)	391, 421, 467, 1087, 1616, 2128
LweI	GCATC	8 cut(s)	703, 723, 817, 1855, 1948, 1962, 1992, 2128
MabI	ACCWGGT	3 cut(s)	1621, 1657, 1894
MaeI	CTAG	3 cut(s)	159, 267, 1719
MaeII	ACGT	1 cut(s)	2374
MaeIII	GTNAC	6 cut(s)	73, 1003, 1132, 1508, 1548, 1815
MbiI	CCGCTC	2 cut(s)	64, 2041
MflI	RGATCY	3 cut(s)	310, 1210, 2253
MhlI	GDGCHC	1 cut(s)	358
MlsI	TGGCCA	1 cut(s)	372
MluCI	AATT	8 cut(s)	221, 347, 563, 1161, 1635, 2241, 2279, 2311
MluNI	TGGCCA	1 cut(s)	372
MlyI	GAGTC	1 cut(s)	2075
MmeI	TCCRAC	4 cut(s)	366, 1238, 2203, 2317
Mox20I	TGGCCA	1 cut(s)	372
Mph1103I	ATGCAT	3 cut(s)	718, 1848, 1941
MroI	TCCGGA	2 cut(s)	187, 1408
MscI	TGGCCA	1 cut(s)	372
MseI	TTAA	4 cut(s)	576, 762, 1584, 2175
Msp20I	TGGCCA	1 cut(s)	372
MspA1I	CMGCKG	2 cut(s)	404, 434
MspCI	CTTAAG	1 cut(s)	761
MspI	CCGG	9 cut(s)	143, 188, 276, 337, 488, 1409, 1515, 2123, 2264
Mva1269I	GAATGC	1 cut(s)	1870
MvaI	CCWGG	9 cut(s)	359, 707, 1035, 1596, 1623, 1659, 1782, 1896, 2295
MvnI	CGCG	1 cut(s)	422
NciI	CCSGG	1 cut(s)	2124
NdeI	CATATG	1 cut(s)	1499
NlaIV	GGNNCC	8 cut(s)	10, 54, 135, 241, 390, 1403, 1751, 2127
NmuCI	GTSAC	4 cut(s)	73, 1508, 1548, 1815
NsiI	ATGCAT	3 cut(s)	718, 1848, 1941
PalAI	GGCGCGCC	1 cut(s)	420
PauI	GCGCGC	1 cut(s)	420
PctI	GAATGC	1 cut(s)	1870
PfeI	GAWTC	4 cut(s)	1195, 1537, 1672, 1828
PflMI	CCANNNNNTGG	3 cut(s)	226, 1622, 1721
PinAI	ACCGGT	2 cut(s)	336, 487
PkrI	GCNGC	9 cut(s)	406, 436, 457, 1077, 1529, 1606, 2013, 2067, 2118
Ple19I	CGATCG	1 cut(s)	168
PleI	GAGTC	1 cut(s)	2075
PpsI	GAGTC	1 cut(s)	2075
PshAI	GACNNNNGTC	1 cut(s)	1813
Psp6I	CCWGG	9 cut(s)	357, 705, 1033, 1594, 1621, 1657, 1780, 1894, 2293
PspGI	CCWGG	9 cut(s)	357, 705, 1033, 1594, 1621, 1657, 1780, 1894, 2293
PspN4I	GGNNCC	8 cut(s)	10, 54, 135, 241, 390, 1403, 1751, 2127
PspPI	GGNCC	9 cut(s)	53, 239, 586, 1390, 1401, 1598, 1749, 1784, 2126
PsrI	GAACNNNNNNTAC	2 cut(s)	483, 515
PstI	CTGCAG	1 cut(s)	2098
PstNI	CAGNNNCTG	2 cut(s)	437, 518
PsuI	RGATCY	3 cut(s)	310, 1210, 2253
PteI	GCGCGC	1 cut(s)	420
PvuI	CGATCG	1 cut(s)	168
PvuII	CAGCTG	1 cut(s)	434
RsaI	GTAC	5 cut(s)	317, 492, 1423, 1737, 1884
RsaNI	GTAC	5 cut(s)	316, 491, 1422, 1736, 1883
SalI	GTCGAC	1 cut(s)	206
SaqAI	TTAA	4 cut(s)	576, 762, 1584, 2175
SatI	GCNGC	9 cut(s)	405, 435, 456, 1076, 1528, 1605, 2012, 2066, 2117
Sau96I	GGNCC	9 cut(s)	53, 239, 586, 1390, 1401, 1598, 1749, 1784, 2126
SchI	GAGTC	1 cut(s)	2075
SduI	GDGCHC	1 cut(s)	358
SexAI	ACCWGGT	3 cut(s)	1621, 1657, 1894
SfaNI	GCATC	8 cut(s)	703, 723, 817, 1855, 1948, 1962, 1992, 2128
SfcI	CTRYAG	2 cut(s)	1425, 2094
SgsI	GGCGCGCC	1 cut(s)	420
SinI	GGWCC	4 cut(s)	239, 1401, 1598, 1784
SmlI	CTYRAG	5 cut(s)	761, 831, 977, 1375, 2303
SmoI	CTYRAG	5 cut(s)	761, 831, 977, 1375, 2303
Sse9I	AATT	8 cut(s)	221, 347, 563, 1161, 1635, 2241, 2279, 2311
SsiI	CCGC	8 cut(s)	62, 402, 1528, 2009, 2012, 2039, 2065, 2389
SspI	AATATT	1 cut(s)	1763
SspMI	CTAG	3 cut(s)	159, 267, 1719
TaaI	ACNGT	8 cut(s)	532, 770, 790, 1508, 1699, 2143, 2200, 2221
TaiI	ACGT	1 cut(s)	2377
TaqI	TCGA	5 cut(s)	207, 352, 601, 1639, 1774
TasI	AATT	8 cut(s)	221, 347, 563, 1161, 1635, 2241, 2279, 2311
TauI	GCSGC	3 cut(s)	1530, 2014, 2068
TfiI	GAWTC	4 cut(s)	1195, 1537, 1672, 1828
Tru1I	TTAA	4 cut(s)	576, 762, 1584, 2175
Tru9I	TTAA	4 cut(s)	576, 762, 1584, 2175
TscAI	CASTG	4 cut(s)	82, 775, 2146, 2205
TseFI	GTSAC	4 cut(s)	73, 1508, 1548, 1815
TseI	GCWGC	6 cut(s)	404, 434, 455, 1075, 1604, 2116
Tsp45I	GTSAC	4 cut(s)	73, 1508, 1548, 1815
TspDTI	ATGAA	7 cut(s)	679, 1077, 1383, 1755, 1877, 2178, 2352
TspGWI	ACGGA	4 cut(s)	252, 303, 767, 1414
TspRI	CASTG	4 cut(s)	82, 775, 2146, 2205
Van91I	CCANNNNNTGG	3 cut(s)	226, 1622, 1721
Vha464I	CTTAAG	1 cut(s)	761
VpaK11BI	GGWCC	4 cut(s)	239, 1401, 1598, 1784
XagI	CCTNNNNNAGG	2 cut(s)	741, 980
XapI	RAATTY	2 cut(s)	347, 2241
XcmI	CCANNNNNNNNNTGG	1 cut(s)	365
XmiI	GTMKAC	2 cut(s)	207, 527
XspI	CTAG	3 cut(s)	159, 267, 1719
Zsp2I	ATGCAT	3 cut(s)	718, 1848, 1941

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.