Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr13

Orthogroup ID

OG0001998

Physical Location & Seq

Genomic Coordinates Forward (+)

18258084 .. 18260368

Gene Structure 2285 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom13g21530.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2160 bp

ATGGCTAATAATACCGGAAATGCAAAGTTCAGTTTCTTGATTTCGATAGATCCCTACCATGCATATTATCAACATCGGTTGTCTGAATTCCGTGCACAGAATCAGTCTTCTGGACAGCAACCATCTACACAGCCTGCAGATTCTGCTTCACCTGAGTCTGCCCCACCAGCTCCAGCTGCAGATGGTGAAGCAGGAACCCCAAAGCCTGATCCCTCTGCCCAGTTTAGACCTGTTCGCAAAGTGCTCGAACCACCACAAGCTGAGGAGTATACTGTTCGTCTTCCTGAAGGTATTACCGGGGAAGAGTTGGATATTATTAAGCTCACAGCGCAGTTTGCAGCTCGAAATGGGAAAACATTTTTGCAAGGATTGACAAGCAGGGAAATGAATAACCACCAGTTCCATTTTCTGAAGCCTATGCATAGCATGTTCACATTTTTCACTTCTCTGGCTGATGCATATTCTAAGGTGTTGATGCCTCCGGAGAATTTGCAAGATAAGCTTAAGAAAAGTGTTGCAGACATGACAACTGTGCTCGAAAGGTGTGTCCATCGACTTGAGTGGGAGCGTTCACAAGAGCAGGCAAGACAGAAGGCTGAAGATGAGATTGAGCAGGAAAGAATACAAATGGCTATGATTGATTGGCATGATTTTGTTGTGGTTGAAACAATAGACTTTGCAGATGATGAGGATGAGGATTTACCTCCTCCGATGACCCTTGAGGAGGTTATAAGGAGAAGCAAGGTCGCCGATATGGAAGAGGACATTGTTGAGCCTGGTAAGGAGGTGGAAATGGAAATGGATGAAGAAGAGATGCAACTTGTTGAAGAGGGCTTGAGGACAGCCAGACTTGAAGAGAATGATGATGAAAAGAGGAACGAGAATATGGTGACAGAGGATCCAGAACCACCAATGAGAATTGTGAAGAACTGGAAGAGACCTGAGGACAGGATCCCTGCAGAAAGAGACCCAACAAAGTATGTCATTTCCCCAATCACTGGAGAGCTCATCCCTATCAATGAGATGTCTGAACACATGAGGATTTCTCTCATTGATCGAAAATACAAAGAGCAAAAGGAAAGGATGTTTGCTAAGATTCGGGAGACTACTCTTGCTCAAGATGATGAAATCTCAAGAAACATTGTGGGCCTTGCACGAACCCGTCCTGATATTTTTGGTACCACAGAGGAAGAAGTGTCTAATGCTGTCAAGGCTGAGATTGAGAAAAAGAAAGATGAGCAACCAAAGCAAGTCATCTGGGATGGTCACACTGGAAGTATTGGCCGCACAGCAAATCAAGCAATGTCGCAGAATATCAATGGAGAGGATCAAAATGATGGTCTTAACAATGATGCTAGGAACCTTCCTGGTCCTGCAGCTCCTCCTCCAAAGCCTGGTGTGCCTTCAATTCGTCCTCTTCCTCCACCACCTGGTCTTGCCTTGAATCTACCTCGTCCTCCAAACACAGTCCAGTATTCTGCTCCAACTAGCGGTGGTCTCCCTGCACCTCCACCAAGGCCCCCGGTTGTCCAATATCAATCAATTCGACCACCTGGACCCCCAATGCCCATGAGTTCTGGACAGCAGCCCCTTATGCTCAATCGACCACCTCCTATGCATCCATCCATGTCTATGAATGCACCTGCTATTTCTGTACCACCTCCACCTGGTTCTCAGTTTACACCAATGCAAGTTCCCCGACCTTATATGCCTCTTCCTGTTCCTCCACCTGCAATGCAAATGATGCCACCCCCACCTTTGCCTCAGGGAATGCCTCCACCACCACCCGAAGAAGCTCCTCCACCGCTTCCAGAAGAACCTGAGCCAAAGCGGCAGAAGCTTGATGATTCAATGCTTATTCCAGAAGATCAGTTTCTGGCACAGCATCCAGGACCTGTTCGCATCACAGTATCTGTGCCCAATGTTGATGAAGGTAATCTAAAGGGACAACTTTTGGAGATCTCGGTGCAGTCTTTATCAGAAACTGTTGGTAGTTTGAAAGAGAAAATTTCTGGGGAGATCCAGCTTCCAGCAAACAAACAGAAGTTGAGTGGAAAACCTGGTTTTCTGAAGGACAACATGTCACTTGCATATTACAATGTTGGAGCAGCTGAAACACTTACTCTTTCATTGAGGGAGCGTGGTGGAAGAAAGAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000245 GO:0000375 GO:0000377 GO:0000381 GO:0000389 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005684 GO:0005686 GO:0006139 GO:0006376 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0010468 GO:0016043 GO:0016070 GO:0016071 GO:0019219 GO:0019222 GO:0022607 GO:0022613 GO:0022618 GO:0030532 GO:0031323 GO:0032991 GO:0034622 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043484 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0048024 GO:0050684 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065003 GO:0065007 GO:0071004 GO:0071010 GO:0071013 GO:0071704 GO:0071826 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:0097525 GO:0120114 GO:1901360 GO:1901363 GO:1902494 GO:1903311 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

PRP21_like_P Surp ubiquitin

Protein Analysis

720

Amino Acids

80.22

Weight (kDa)

5.01

Isoelectric Point (pI)

63.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Surp	PF01805	1 - 30	1.9e-06	Surp module
Surp	PF01805	103 - 154	2.8e-15	Surp module
PRP21_like_P	PF12230	173 - 386	2.6e-53	Pre-mRNA splicing factor PRP21 like protein
ubiquitin	PF00240	648 - 714	3e-07	Ubiquitin family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001998)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G14650 AT1G14650 AT1G14650
fragaria_vesca	FvH4_4g07440 FvH4_4g07440 FvH4_4g07440 FvH4_4g07440 FvH4_4g07440 FvH4_4g07440 FvH4_4g07440 FvH4_4g07440 FvH4_4g07440 FvH4_4g07440 FvH4_4g07440 FvH4_4g07440 FvH4_4g07440 FvH4_4g07440
malus_domestica	MD13G1244100.v1.1 MD16G1250800.v1.1
prunus_persica	Prupe.1G077400_v2.0.a1 Prupe.1G077400_v2.0.a1 Prupe.1G077400_v2.0.a1 Prupe.1G077400_v2.0.a1 Prupe.1G077400_v2.0.a1 Prupe.1G077400_v2.0.a1 Prupe.1G077400_v2.0.a1 Prupe.1G077400_v2.0.a1 Prupe.1G077400_v2.0.a1 Prupe.1G077400_v2.0.a1 Prupe.1G077400_v2.0.a1
pyrus_communis	pycom13g21530 pycom16g21040
rosa_chinensis	RchiOBHm_Chr4g0399901
rosa_laevigata	RLG00000009234
rosa_multiflora	Rmu_co8505131.1_g000001 Rmu_sc0014676.1_g000002
rosa_roxburghii	Rroxscaffold_5G00344760
rosa_rugosa	Rorug04G0020000 Rorug04G0020100 Rorug04G0020200 Rorug04G0020200
rosa_samantha	Rh4AG097000 Rh4BG094600 Rh4CG106100
rosa_wichuraiana	Rw4G008020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	731
AarI	CACCTGC	2 cut(s)	1651, 1738
Acc36I	ACCTGC	2 cut(s)	1651, 1738
Acc65I	GGTACC	1 cut(s)	1178
AccB1I	GGYRCC	1 cut(s)	1178
AccB7I	CCANNNNNTGG	3 cut(s)	998, 1394, 1430
AccI	GTMKAC	1 cut(s)	269
AccIII	TCCGGA	1 cut(s)	481
AciI	CCGC	4 cut(s)	1285, 1491, 1805, 1831
AclWI	GGATC	8 cut(s)	44, 203, 893, 906, 946, 959, 1335, 2014
AcoI	YGGCCR	1 cut(s)	1282
AcsI	RAATTY	3 cut(s)	86, 487, 2007
AcuI	CTGAAG	4 cut(s)	306, 431, 618, 2090
AfaI	GTAC	2 cut(s)	1180, 1656
AfiI	CCNNNNNNNGG	6 cut(s)	724, 998, 1394, 1430, 1490, 1667
AflII	CTTAAG	1 cut(s)	503
AflIII	ACRYGT	1 cut(s)	2079
AgsI	TTSAA	7 cut(s)	665, 827, 854, 1407, 1444, 1851, 1999
AhdI	GACNNNNNGTC	1 cut(s)	2080
AjnI	CCWGG	8 cut(s)	775, 1366, 1393, 1429, 1552, 1666, 1888, 2059
Alw21I	GWGCWC	4 cut(s)	97, 246, 537, 1008
Alw26I	GTCTC	4 cut(s)	931, 960, 1097, 1502
Alw44I	GTGCAC	1 cut(s)	93
AlwI	GGATC	8 cut(s)	44, 203, 893, 906, 946, 959, 1335, 2014
AlwNI	CAGNNNCTG	5 cut(s)	143, 1876, 1895, 1913, 1985
Aor13HI	TCCGGA	1 cut(s)	481
AoxI	GGCC	3 cut(s)	1147, 1282, 1517
ApaLI	GTGCAC	1 cut(s)	93
ApeKI	GCWGC	5 cut(s)	176, 338, 1376, 1585, 2108
ApoI	RAATTY	3 cut(s)	86, 487, 2007
ArsI	GACNNNNNNTTYG	4 cut(s)	531, 563, 1324, 1356
Asp718I	GGTACC	1 cut(s)	1178
AspLEI	GCGC	1 cut(s)	331
AspS9I	GGNCC	5 cut(s)	1147, 1370, 1518, 1556, 1892
AsuC2I	CCSGG	2 cut(s)	298, 1523
AsuHPI	GGTGA	3 cut(s)	141, 197, 901
AvaII	GGWCC	3 cut(s)	1370, 1556, 1892
AxyI	CCTNAGG	2 cut(s)	942, 1764
BaeGI	GKGCMC	2 cut(s)	97, 1920
BamHI	GGATCC	2 cut(s)	898, 951
BanI	GGYRCC	1 cut(s)	1178
BanII	GRGCYC	1 cut(s)	1008
BbsI	GAAGAC	2 cut(s)	99, 272
Bbv12I	GWGCWC	4 cut(s)	97, 246, 537, 1008
BbvCI	CCTCAGC	1 cut(s)	261
BbvI	GCAGC	5 cut(s)	163, 350, 1388, 1597, 2120
BccI	CCATC	6 cut(s)	130, 176, 558, 1256, 1331, 1630
BcgI	CGANNNNNNTGC	2 cut(s)	226, 260
BciT130I	CCWGG	8 cut(s)	777, 1368, 1395, 1431, 1554, 1668, 1890, 2061
BcnI	CCSGG	2 cut(s)	298, 1523
BcoDI	GTCTC	4 cut(s)	931, 960, 1097, 1502
BfaI	CTAG	2 cut(s)	1356, 1488
BfmI	CTRYAG	4 cut(s)	135, 177, 957, 1374
BfrI	CTTAAG	1 cut(s)	503
BfuAI	ACCTGC	2 cut(s)	1651, 1738
BglI	GCCNNNNNGGC	1 cut(s)	1831
BglII	AGATCT	1 cut(s)	1959
BisI	GCNGC	7 cut(s)	177, 339, 1285, 1377, 1586, 1832, 2109
BlsI	GCNGC	7 cut(s)	178, 340, 1286, 1378, 1587, 1833, 2110
Bme18I	GGWCC	3 cut(s)	1370, 1556, 1892
BmeRI	GACNNNNNGTC	1 cut(s)	2080
BmgT120I	GGNCC	5 cut(s)	1147, 1370, 1518, 1556, 1892
BmiI	GGNNCC	7 cut(s)	196, 900, 953, 1180, 1361, 1520, 1558
BmrI	ACTGGG	1 cut(s)	214
BmsI	GCATC	8 cut(s)	445, 465, 804, 1342, 1627, 1734, 1894, 1911
BmuI	ACTGGG	1 cut(s)	214
BpiI	GAAGAC	2 cut(s)	99, 272
BplI	GAGNNNNNCTC	2 cut(s)	1030, 1062
BpmI	CTGGAG	2 cut(s)	156, 1020
Bpu10I	CCTNAGC	2 cut(s)	261, 1821
BpuEI	CTTGAG	5 cut(s)	578, 740, 856, 1101, 1117
BpuMI	CCSGG	2 cut(s)	298, 1523
BsaI	GGTCTC	3 cut(s)	931, 960, 1502
BsaJI	CCNNGG	3 cut(s)	297, 1514, 1521
BsaWI	WCCGGW	2 cut(s)	14, 481
Bsc4I	CCNNNNNNNGG	6 cut(s)	724, 998, 1394, 1430, 1490, 1667
Bse1I	ACTGG	6 cut(s)	220, 397, 935, 1003, 1276, 1471
Bse21I	CCTNAGG	2 cut(s)	942, 1764
Bse3DI	GCAATG	2 cut(s)	1308, 1740
BseAI	TCCGGA	1 cut(s)	481
BseBI	CCWGG	8 cut(s)	777, 1368, 1395, 1431, 1554, 1668, 1890, 2061
BseDI	CCNNGG	3 cut(s)	297, 1514, 1521
BseGI	GGATG	8 cut(s)	697, 808, 1008, 1089, 1267, 1618, 1622, 1885
BseLI	CCNNNNNNNGG	6 cut(s)	724, 998, 1394, 1430, 1490, 1667
BseMI	GCAATG	2 cut(s)	1308, 1740
BseMII	CTCAG	7 cut(s)	144, 252, 933, 1206, 1688, 1778, 1812
BseNI	ACTGG	6 cut(s)	220, 397, 935, 1003, 1276, 1471
BseRI	GAGGAG	6 cut(s)	278, 696, 737, 1371, 1374, 1788
BseSI	GKGCMC	2 cut(s)	97, 1920
BseXI	GCAGC	5 cut(s)	163, 350, 1388, 1597, 2120
BsgI	GTGCAG	2 cut(s)	1488, 1988
BshFI	GGCC	3 cut(s)	1149, 1284, 1519
BshNI	GGYRCC	1 cut(s)	1178
BsiHKAI	GWGCWC	4 cut(s)	97, 246, 537, 1008
BsiSI	CCGG	4 cut(s)	15, 297, 482, 1523
BslFI	GGGAC	1 cut(s)	1959
BslI	CCNNNNNNNGG	6 cut(s)	724, 998, 1394, 1430, 1490, 1667
BsmAI	GTCTC	4 cut(s)	931, 960, 1097, 1502
BsmFI	GGGAC	1 cut(s)	1959
BsmI	GAATGC	2 cut(s)	1642, 1776
BsnI	GGCC	3 cut(s)	1149, 1284, 1519
Bso31I	GGTCTC	3 cut(s)	931, 960, 1502
Bsp1286I	GDGCHC	5 cut(s)	97, 246, 537, 1008, 1920
Bsp13I	TCCGGA	1 cut(s)	481
Bsp143I	GATC	9 cut(s)	49, 208, 898, 951, 1054, 1327, 1867, 1959, 2019
BspACI	CCGC	4 cut(s)	1285, 1491, 1805, 1831
BspANI	GGCC	3 cut(s)	1149, 1284, 1519
BspCNI	CTCAG	7 cut(s)	145, 253, 934, 1207, 1687, 1777, 1813
BspEI	TCCGGA	1 cut(s)	481
BspLI	GGNNCC	7 cut(s)	196, 900, 953, 1180, 1361, 1520, 1558
BspMAI	CTGCAG	4 cut(s)	139, 181, 961, 1378
BspMI	ACCTGC	2 cut(s)	1651, 1738
BspPI	GGATC	8 cut(s)	44, 203, 893, 906, 946, 959, 1335, 2014
BspT107I	GGYRCC	1 cut(s)	1178
BspTI	CTTAAG	1 cut(s)	503
BspTNI	GGTCTC	3 cut(s)	931, 960, 1502
BsrDI	GCAATG	2 cut(s)	1308, 1740
BsrI	ACTGG	6 cut(s)	220, 397, 935, 1003, 1276, 1471
BssECI	CCNNGG	3 cut(s)	297, 1514, 1521
BssMI	GATC	9 cut(s)	49, 208, 898, 951, 1054, 1327, 1867, 1959, 2019
BssNAI	GTATAC	1 cut(s)	270
BssT1I	CCWWGG	1 cut(s)	1514
Bst1107I	GTATAC	1 cut(s)	270
Bst2UI	CCWGG	8 cut(s)	777, 1368, 1395, 1431, 1554, 1668, 1890, 2061
Bst4CI	ACNGT	5 cut(s)	274, 532, 1468, 1909, 1987
Bst6I	CTCTTC	8 cut(s)	297, 753, 804, 822, 849, 929, 1422, 1719
BstAFI	CTTAAG	1 cut(s)	503
BstAPI	GCANNNNNTGC	2 cut(s)	143, 1744
BstC8I	GCNNGC	2 cut(s)	135, 582
BstDEI	CTNAG	9 cut(s)	153, 261, 465, 942, 1092, 1215, 1674, 1764, 1821
BstENI	CCTNNNNNAGG	1 cut(s)	722
BstF5I	GGATG	8 cut(s)	697, 808, 1008, 1089, 1267, 1618, 1622, 1885
BstHHI	GCGC	1 cut(s)	331
BstKTI	GATC	9 cut(s)	52, 211, 901, 954, 1057, 1330, 1870, 1962, 2022
BstMAI	GTCTC	4 cut(s)	931, 960, 1097, 1502
BstMBI	GATC	9 cut(s)	49, 208, 898, 951, 1054, 1327, 1867, 1959, 2019
BstNI	CCWGG	8 cut(s)	777, 1368, 1395, 1431, 1554, 1668, 1890, 2061
BstNSI	RCATGY	2 cut(s)	430, 2083
BstSFI	CTRYAG	4 cut(s)	135, 177, 957, 1374
BstSLI	GKGCMC	2 cut(s)	97, 1920
BstV1I	GCAGC	5 cut(s)	163, 350, 1388, 1597, 2120
BstV2I	GAAGAC	2 cut(s)	99, 272
BstX2I	RGATCY	5 cut(s)	49, 898, 951, 1959, 2019
BstYI	RGATCY	5 cut(s)	49, 898, 951, 1959, 2019
BstZ17I	GTATAC	1 cut(s)	270
Bsu36I	CCTNAGG	2 cut(s)	942, 1764
BsuRI	GGCC	3 cut(s)	1149, 1284, 1519
BtsCI	GGATG	8 cut(s)	697, 808, 1008, 1089, 1267, 1618, 1622, 1885
BtsIMutI	CAGTG	2 cut(s)	996, 1269
BveI	ACCTGC	2 cut(s)	1651, 1738
Cac8I	GCNNGC	2 cut(s)	135, 582
CaiI	CAGNNNCTG	5 cut(s)	143, 1876, 1895, 1913, 1985
CfoI	GCGC	1 cut(s)	331
Cfr13I	GGNCC	5 cut(s)	1147, 1370, 1518, 1556, 1892
CsiI	ACCWGGT	3 cut(s)	1429, 1666, 2059
Csp6I	GTAC	2 cut(s)	1179, 1655
CviAII	CATG	8 cut(s)	59, 427, 523, 647, 1036, 1570, 1627, 2080
CviQI	GTAC	2 cut(s)	1179, 1655
DdeI	CTNAG	9 cut(s)	153, 261, 465, 942, 1092, 1215, 1674, 1764, 1821
DpnI	GATC	9 cut(s)	51, 210, 900, 953, 1056, 1329, 1869, 1961, 2021
DpnII	GATC	9 cut(s)	49, 208, 898, 951, 1054, 1327, 1867, 1959, 2019
DriI	GACNNNNNGTC	1 cut(s)	2080
EaeI	YGGCCR	1 cut(s)	1282
Eam1104I	CTCTTC	8 cut(s)	297, 753, 804, 822, 849, 929, 1422, 1719
Eam1105I	GACNNNNNGTC	1 cut(s)	2080
EarI	CTCTTC	8 cut(s)	297, 753, 804, 822, 849, 929, 1422, 1719
Ecl136II	GAGCTC	1 cut(s)	1006
Eco130I	CCWWGG	1 cut(s)	1514
Eco24I	GRGCYC	1 cut(s)	1008
Eco31I	GGTCTC	3 cut(s)	931, 960, 1502
Eco47I	GGWCC	3 cut(s)	1370, 1556, 1892
Eco53kI	GAGCTC	1 cut(s)	1006
Eco57I	CTGAAG	4 cut(s)	306, 431, 618, 2090
Eco81I	CCTNAGG	2 cut(s)	942, 1764
EcoICRI	GAGCTC	1 cut(s)	1006
EcoNI	CCTNNNNNAGG	1 cut(s)	722
EcoO109I	RGGNCCY	2 cut(s)	1518, 1892
EcoRI	GAATTC	1 cut(s)	86
EcoRII	CCWGG	8 cut(s)	775, 1366, 1393, 1429, 1552, 1666, 1888, 2059
EcoT14I	CCWWGG	1 cut(s)	1514
EcoT22I	ATGCAT	4 cut(s)	64, 423, 460, 1620
EcoT38I	GRGCYC	1 cut(s)	1008
ErhI	CCWWGG	1 cut(s)	1514
FaeI	CATG	8 cut(s)	62, 430, 526, 650, 1039, 1573, 1630, 2083
FalI	AAGNNNNNCTT	2 cut(s)	486, 518
FaqI	GGGAC	1 cut(s)	1959
FatI	CATG	8 cut(s)	58, 426, 522, 646, 1035, 1569, 1626, 2079
FblI	GTMKAC	1 cut(s)	269
Fnu4HI	GCNGC	7 cut(s)	177, 339, 1285, 1377, 1586, 1832, 2109
FokI	GGATG	8 cut(s)	704, 815, 995, 1096, 1274, 1605, 1609, 1872
FriOI	GRGCYC	1 cut(s)	1008
Fsp4HI	GCNGC	7 cut(s)	177, 339, 1285, 1377, 1586, 1832, 2109
FspBI	CTAG	2 cut(s)	1356, 1488
GlaI	GCGC	1 cut(s)	330
GluI	GCNGC	7 cut(s)	177, 339, 1285, 1377, 1586, 1832, 2109
GsuI	CTGGAG	2 cut(s)	156, 1020
HaeIII	GGCC	3 cut(s)	1149, 1284, 1519
HapII	CCGG	4 cut(s)	15, 297, 482, 1523
HhaI	GCGC	1 cut(s)	331
Hin1II	CATG	8 cut(s)	62, 430, 526, 650, 1039, 1573, 1630, 2083
Hin6I	GCGC	1 cut(s)	329
HinP1I	GCGC	1 cut(s)	329
HindIII	AAGCTT	2 cut(s)	500, 1838
HinfI	GANTC	6 cut(s)	100, 140, 155, 1096, 1444, 1847
HpaII	CCGG	4 cut(s)	15, 297, 482, 1523
HphI	GGTGA	3 cut(s)	141, 197, 901
Hpy166II	GTNNAC	5 cut(s)	95, 270, 432, 572, 1680
Hpy188I	TCNGA	6 cut(s)	85, 411, 711, 1030, 1981, 2070
Hpy8I	GTNNAC	5 cut(s)	95, 270, 432, 572, 1680
HpyAV	CCTTC	6 cut(s)	281, 586, 1373, 1413, 1925, 2065
HpyCH4III	ACNGT	5 cut(s)	274, 532, 1468, 1909, 1987
HpyF3I	CTNAG	9 cut(s)	153, 261, 465, 942, 1092, 1215, 1674, 1764, 1821
Hsp92II	CATG	8 cut(s)	62, 430, 526, 650, 1039, 1573, 1630, 2083
HspAI	GCGC	1 cut(s)	329
Kpn2I	TCCGGA	1 cut(s)	481
KpnI	GGTACC	1 cut(s)	1182
Kzo9I	GATC	9 cut(s)	49, 208, 898, 951, 1054, 1327, 1867, 1959, 2019
LmnI	GCTCC	7 cut(s)	175, 565, 1384, 1486, 1801, 2105, 2137
Lsp1109I	GCAGC	5 cut(s)	163, 350, 1388, 1597, 2120
LweI	GCATC	8 cut(s)	445, 465, 804, 1342, 1627, 1734, 1894, 1911
MabI	ACCWGGT	3 cut(s)	1429, 1666, 2059
MaeI	CTAG	2 cut(s)	1356, 1488
MaeIII	GTNAC	3 cut(s)	889, 1265, 2082
MalI	GATC	9 cut(s)	51, 210, 900, 953, 1056, 1329, 1869, 1961, 2021
MboI	GATC	9 cut(s)	49, 208, 898, 951, 1054, 1327, 1867, 1959, 2019
MflI	RGATCY	5 cut(s)	49, 898, 951, 1959, 2019
MhlI	GDGCHC	5 cut(s)	97, 246, 537, 1008, 1920
MluCI	AATT	6 cut(s)	86, 487, 918, 1407, 1542, 2007
MlyI	GAGTC	1 cut(s)	164
MmeI	TCCRAC	3 cut(s)	288, 1508, 2083
Mph1103I	ATGCAT	4 cut(s)	64, 423, 460, 1620
MroI	TCCGGA	1 cut(s)	481
MseI	TTAA	3 cut(s)	318, 504, 1344
MslI	CAYNNNNRTG	1 cut(s)	1631
MspA1I	CMGCKG	2 cut(s)	176, 2111
MspCI	CTTAAG	1 cut(s)	503
MspI	CCGG	4 cut(s)	15, 297, 482, 1523
Mva1269I	GAATGC	2 cut(s)	1642, 1776
MvaI	CCWGG	8 cut(s)	777, 1368, 1395, 1431, 1554, 1668, 1890, 2061
NciI	CCSGG	2 cut(s)	298, 1523
NdeII	GATC	9 cut(s)	49, 208, 898, 951, 1054, 1327, 1867, 1959, 2019
NlaIII	CATG	8 cut(s)	62, 430, 526, 650, 1039, 1573, 1630, 2083
NlaIV	GGNNCC	7 cut(s)	196, 900, 953, 1180, 1361, 1520, 1558
NmuCI	GTSAC	3 cut(s)	889, 1265, 2082
NsiI	ATGCAT	4 cut(s)	64, 423, 460, 1620
NspI	RCATGY	2 cut(s)	430, 2083
PaqCI	CACCTGC	2 cut(s)	1651, 1738
PciI	ACATGT	1 cut(s)	2079
PctI	GAATGC	2 cut(s)	1642, 1776
PfeI	GAWTC	5 cut(s)	100, 140, 1096, 1444, 1847
PflMI	CCANNNNNTGG	3 cut(s)	998, 1394, 1430
PfoI	TCCNGGA	1 cut(s)	1888
PkrI	GCNGC	7 cut(s)	178, 340, 1286, 1378, 1587, 1833, 2110
PleI	GAGTC	1 cut(s)	163
PpsI	GAGTC	1 cut(s)	163
PpuMI	RGGWCCY	1 cut(s)	1892
PscI	ACATGT	1 cut(s)	2079
PsiI	TTATAA	1 cut(s)	731
Psp124BI	GAGCTC	1 cut(s)	1008
Psp5II	RGGWCCY	1 cut(s)	1892
Psp6I	CCWGG	8 cut(s)	775, 1366, 1393, 1429, 1552, 1666, 1888, 2059
PspGI	CCWGG	8 cut(s)	775, 1366, 1393, 1429, 1552, 1666, 1888, 2059
PspN4I	GGNNCC	7 cut(s)	196, 900, 953, 1180, 1361, 1520, 1558
PspPI	GGNCC	5 cut(s)	1147, 1370, 1518, 1556, 1892
PspPPI	RGGWCCY	1 cut(s)	1892
PstI	CTGCAG	4 cut(s)	139, 181, 961, 1378
PstNI	CAGNNNCTG	5 cut(s)	143, 1876, 1895, 1913, 1985
PsuI	RGATCY	5 cut(s)	49, 898, 951, 1959, 2019
PvuII	CAGCTG	2 cut(s)	176, 2111
RsaI	GTAC	2 cut(s)	1180, 1656
RsaNI	GTAC	2 cut(s)	1179, 1655
RseI	CAYNNNNRTG	1 cut(s)	1631
SacI	GAGCTC	1 cut(s)	1008
SaqAI	TTAA	3 cut(s)	318, 504, 1344
SatI	GCNGC	7 cut(s)	177, 339, 1285, 1377, 1586, 1832, 2109
Sau3AI	GATC	9 cut(s)	49, 208, 898, 951, 1054, 1327, 1867, 1959, 2019
Sau96I	GGNCC	5 cut(s)	1147, 1370, 1518, 1556, 1892
SchI	GAGTC	1 cut(s)	164
SduI	GDGCHC	5 cut(s)	97, 246, 537, 1008, 1920
SexAI	ACCWGGT	3 cut(s)	1429, 1666, 2059
SfaNI	GCATC	8 cut(s)	445, 465, 804, 1342, 1627, 1734, 1894, 1911
SfcI	CTRYAG	4 cut(s)	135, 177, 957, 1374
SinI	GGWCC	3 cut(s)	1370, 1556, 1892
SmiMI	CAYNNNNRTG	1 cut(s)	1631
SmlI	CTYRAG	6 cut(s)	503, 557, 719, 835, 1116, 1132
SmoI	CTYRAG	6 cut(s)	503, 557, 719, 835, 1116, 1132
Sse9I	AATT	6 cut(s)	86, 487, 918, 1407, 1542, 2007
SsiI	CCGC	4 cut(s)	1285, 1491, 1805, 1831
SspMI	CTAG	2 cut(s)	1356, 1488
SstI	GAGCTC	1 cut(s)	1008
StyI	CCWWGG	1 cut(s)	1514
TaaI	ACNGT	5 cut(s)	274, 532, 1468, 1909, 1987
TaqI	TCGA	8 cut(s)	44, 246, 343, 537, 553, 1057, 1546, 1603
TasI	AATT	6 cut(s)	86, 487, 918, 1407, 1542, 2007
TauI	GCSGC	2 cut(s)	1287, 1834
TfiI	GAWTC	5 cut(s)	100, 140, 1096, 1444, 1847
Tru1I	TTAA	3 cut(s)	318, 504, 1344
Tru9I	TTAA	3 cut(s)	318, 504, 1344
TscAI	CASTG	2 cut(s)	1003, 1276
TseFI	GTSAC	3 cut(s)	889, 1265, 2082
TseI	GCWGC	5 cut(s)	176, 338, 1376, 1585, 2108
Tsp45I	GTSAC	3 cut(s)	889, 1265, 2082
TspDTI	ATGAA	7 cut(s)	401, 819, 882, 1140, 1649, 1944, 2118
TspGWI	ACGGA	1 cut(s)	80
TspRI	CASTG	2 cut(s)	1003, 1276
Van91I	CCANNNNNTGG	3 cut(s)	998, 1394, 1430
Vha464I	CTTAAG	1 cut(s)	503
VneI	GTGCAC	1 cut(s)	93
VpaK11BI	GGWCC	3 cut(s)	1370, 1556, 1892
XagI	CCTNNNNNAGG	1 cut(s)	722
XapI	RAATTY	3 cut(s)	86, 487, 2007
XceI	RCATGY	2 cut(s)	430, 2083
XmiI	GTMKAC	1 cut(s)	269
XspI	CTAG	2 cut(s)	1356, 1488
Zsp2I	ATGCAT	4 cut(s)	64, 423, 460, 1620

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.