Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0001998

Physical Location & Seq

Genomic Coordinates Reverse (-)

2969992 .. 2971470

Gene Structure 1479 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0020100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1479 bp

ATGGAGTTCATGATTAAAACTGTATTAGTTTGCGGTTGCTTAGTGTTTGGTGGTGTGGTGATTAAGAGACTATTCCGTCACAAGCCCTGCTGGGAGACACTACCTGACGATATCATGGAGGTTATTGTGCCACACCTGAGTGTACGTGATCGTATACGCTTAAGCCTAGTTTGCAAGCCATGGAGCTTAGTTCCTATGCGCAAAGACATCCCTAGTTCTCCTCACAAACTCCCCTGGTTAGTACTCCCTCAACCTGAATCTCAAGCTCTAACTTGCAATGATACCTCCTTAAGCTTTTACGACCTCCATGACGGCAAAGTTTTTAAGTTGGAGCTGCCTGAACCTGTTCGTGGAGCGTGGTTTCGAGGGTCTTCGAAAGGTTGGTTGATTATGATTAAGGAAAGTGAACAAAACACTGCAACATTTCTGGTAAATCCAATTTCGGGAGTCCAACACCAACTTCCATCCTTGAGAACGATTCCGTCTTTCCAGAAGTTTGTAGAAACGAAGAAATGGAAACGATATGGTGCCTTTGCTTTCTACAACTGCCTTGTGCTATCTACCTCAGATATTAATTCCGATGAATGTGTGGTAGCAGCTGCTCTTGGGTGTGCCAATGATATATTGGGTTTGTGCAGACCTGGAGACAAAGAATGGAATATTTTTCGGTTATTAGATGCAGATGAAGCTTTGACTGATTTACTGTTTTGTTCTGGCAAGCTATACGCCTTGGTTGTGAGTAATAATAAGTCCGGCGTTGTTTCAACTGCTCCTACGTTGAATTTTGGAGATCATTCGGTGGAATTGAGATTAATCTACAGCGCAAATATAAACTTCAATCCTAACTTTGAATATTATGGTGACTATGAGATCGATCTACAAGGCTATGTTGACTCATATTTGATAGAGTCTGCAACCAATAATGAAGTATTGTTGATCCGCCAAAGGTTAGATGTATTTTCGAGCATAGGTGACAACAACAACAGAGAGAATGGTGGTGGCGGCAACCATGAGGAAGAGGAAGAGGAAGTCGAAGGCAATGACGGTGGTGATGACGCCAATGAGGAATGGAACAACTTGGAAGGAAATGGTGGTGATAGAGGTGACTGGGGCATCAATATTGTTGAGGAAAATGATGATGATCTAAATACATATTTGAGGACAAGTGGTTTTGATGTATACAGGCTTGATCCGCAGAATGACAATTTTGAAGTGGTACGAAGTTTGGGGGATAAGCTATTATTTTTGTCAATGGGTGGTTCATTTTCCCTTCGGGCAAGTGATATCAAAATGGAAGACTTCAGAGGGAATTGCATTTATTTTGCAACAAATAATTTCATGAGTTTACATTCTTTAGAAACATATACATGTCGGGAGATTGGTGTATTTGACTTGAATACAAGAAGAATTCAGCGATCTTTTCCGAGTGTAGAGGTGTCGATTCGGTCTCAACTCAATTGGTTCACTCCAATGTTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000245 GO:0000375 GO:0000377 GO:0000381 GO:0000389 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005684 GO:0005686 GO:0006139 GO:0006376 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0010468 GO:0016043 GO:0016070 GO:0016071 GO:0019219 GO:0019222 GO:0022607 GO:0022613 GO:0022618 GO:0030532 GO:0031323 GO:0032991 GO:0034622 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043484 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0048024 GO:0050684 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065003 GO:0065007 GO:0071004 GO:0071010 GO:0071013 GO:0071704 GO:0071826 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:0097525 GO:0120114 GO:1901360 GO:1901363 GO:1902494 GO:1903311 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

PRP21_like_P Surp ubiquitin

Protein Analysis

492

Amino Acids

55.68

Weight (kDa)

4.79

Isoelectric Point (pI)

39.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_KIB1-4	PF03478	99 - 464	1.4e-40	KIB1-4 beta-propeller

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001998)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G14650 AT1G14650 AT1G14650
fragaria_vesca	FvH4_4g07440 FvH4_4g07440 FvH4_4g07440 FvH4_4g07440 FvH4_4g07440 FvH4_4g07440 FvH4_4g07440 FvH4_4g07440 FvH4_4g07440 FvH4_4g07440 FvH4_4g07440 FvH4_4g07440 FvH4_4g07440 FvH4_4g07440
malus_domestica	MD13G1244100.v1.1 MD16G1250800.v1.1
prunus_persica	Prupe.1G077400_v2.0.a1 Prupe.1G077400_v2.0.a1 Prupe.1G077400_v2.0.a1 Prupe.1G077400_v2.0.a1 Prupe.1G077400_v2.0.a1 Prupe.1G077400_v2.0.a1 Prupe.1G077400_v2.0.a1 Prupe.1G077400_v2.0.a1 Prupe.1G077400_v2.0.a1 Prupe.1G077400_v2.0.a1 Prupe.1G077400_v2.0.a1
pyrus_communis	pycom13g21530 pycom16g21040
rosa_chinensis	RchiOBHm_Chr4g0399901
rosa_laevigata	RLG00000009234
rosa_multiflora	Rmu_co8505131.1_g000001 Rmu_sc0014676.1_g000002
rosa_roxburghii	Rroxscaffold_5G00344760
rosa_rugosa	Rorug04G0020000 Rorug04G0020100 Rorug04G0020200 Rorug04G0020200
rosa_samantha	Rh4AG097000 Rh4BG094600 Rh4CG106100
rosa_wichuraiana	Rw4G008020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1477
AasI	GACNNNNNNGTC	1 cut(s)	75
Acc16I	TGCGCA	1 cut(s)	200
AccB1I	GGYRCC	1 cut(s)	527
AccI	GTMKAC	2 cut(s)	154, 1179
AciI	CCGC	4 cut(s)	33, 940, 1002, 1193
AclWI	GGATC	2 cut(s)	931, 1184
AcsI	RAATTY	2 cut(s)	781, 1407
AcuI	CTGAAG	1 cut(s)	1285
AcyI	GRCGYC	1 cut(s)	1056
AfaI	GTAC	3 cut(s)	144, 243, 1218
AfiI	CCNNNNNNNGG	2 cut(s)	350, 443
AflII	CTTAAG	2 cut(s)	160, 289
AflIII	ACRYGT	1 cut(s)	1367
AgsI	TTSAA	6 cut(s)	765, 781, 838, 851, 1211, 1396
AjnI	CCWGG	2 cut(s)	233, 640
AjuI	GAANNNNNNNTTGG	2 cut(s)	444, 476
AleI	CACNNNNGTG	1 cut(s)	138
AluBI	AGCT	8 cut(s)	186, 266, 294, 334, 599, 689, 721, 1237
AluI	AGCT	8 cut(s)	186, 266, 294, 334, 599, 689, 721, 1237
Alw26I	GTCTC	4 cut(s)	61, 89, 639, 1452
AlwI	GGATC	2 cut(s)	931, 1184
ApeKI	GCWGC	3 cut(s)	334, 596, 599
ApoI	RAATTY	2 cut(s)	781, 1407
AseI	ATTAAT	2 cut(s)	573, 812
Asp700I	GAANNNNTTC	1 cut(s)	345
AspLEI	GCGC	2 cut(s)	201, 824
AsuHPI	GGTGA	6 cut(s)	70, 872, 983, 1061, 1106, 1115
AsuII	TTCGAA	1 cut(s)	374
BanI	GGYRCC	1 cut(s)	527
BbsI	GAAGAC	2 cut(s)	363, 1302
BbvI	GCAGC	3 cut(s)	321, 586, 608
BccI	CCATC	1 cut(s)	472
BceAI	ACGGC	1 cut(s)	328
BciT130I	CCWGG	2 cut(s)	235, 642
BcoDI	GTCTC	4 cut(s)	61, 89, 639, 1452
BfaI	CTAG	2 cut(s)	167, 213
BfmI	CTRYAG	1 cut(s)	817
BfrI	CTTAAG	2 cut(s)	160, 289
BisI	GCNGC	4 cut(s)	335, 597, 600, 1003
BlsI	GCNGC	4 cut(s)	336, 598, 601, 1004
BmcAI	AGTACT	1 cut(s)	243
Bme1390I	CCNGG	2 cut(s)	235, 642
BmiI	GGNNCC	1 cut(s)	529
BmrFI	CCNGG	2 cut(s)	235, 642
BmrI	ACTGGG	1 cut(s)	1117
BmsI	GCATC	2 cut(s)	667, 1122
BmuI	ACTGGG	1 cut(s)	1117
BpiI	GAAGAC	2 cut(s)	363, 1302
BpmI	CTGGAG	1 cut(s)	663
Bpu14I	TTCGAA	1 cut(s)	374
BpuEI	CTTGAG	2 cut(s)	246, 490
Bsa29I	ATCGAT	1 cut(s)	873
BsaAI	YACGTR	1 cut(s)	146
BsaBI	GATNNNNATC	1 cut(s)	1140
BsaHI	GRCGYC	1 cut(s)	1056
BsaI	GGTCTC	1 cut(s)	1452
BsaJI	CCNNGG	3 cut(s)	179, 233, 729
Bsc4I	CCNNNNNNNGG	2 cut(s)	350, 443
Bse1I	ACTGG	1 cut(s)	1112
Bse3DI	GCAATG	2 cut(s)	283, 1045
Bse8I	GATNNNNATC	1 cut(s)	1140
BseBI	CCWGG	2 cut(s)	235, 642
BseCI	ATCGAT	1 cut(s)	873
BseDI	CCNNGG	3 cut(s)	179, 233, 729
BseGI	GGATG	2 cut(s)	207, 464
BseJI	GATNNNNATC	1 cut(s)	1140
BseLI	CCNNNNNNNGG	2 cut(s)	350, 443
BseMI	GCAATG	2 cut(s)	283, 1045
BseMII	CTCAG	2 cut(s)	128, 579
BseNI	ACTGG	1 cut(s)	1112
BseRI	GAGGAG	1 cut(s)	210
BseXI	GCAGC	3 cut(s)	321, 586, 608
BseYI	CCCAGC	1 cut(s)	90
BsgI	GTGCAG	1 cut(s)	655
BshNI	GGYRCC	1 cut(s)	527
BshVI	ATCGAT	1 cut(s)	873
BsiSI	CCGG	1 cut(s)	753
BslI	CCNNNNNNNGG	2 cut(s)	350, 443
BsmAI	GTCTC	4 cut(s)	61, 89, 639, 1452
Bso31I	GGTCTC	1 cut(s)	1452
Bsp119I	TTCGAA	1 cut(s)	374
Bsp143I	GATC	8 cut(s)	148, 790, 870, 874, 936, 1141, 1189, 1415
Bsp19I	CCATGG	1 cut(s)	179
BspACI	CCGC	4 cut(s)	33, 940, 1002, 1193
BspCNI	CTCAG	2 cut(s)	129, 578
BspDI	ATCGAT	1 cut(s)	873
BspHI	TCATGA	2 cut(s)	9, 1338
BspLI	GGNNCC	1 cut(s)	529
BspPI	GGATC	2 cut(s)	931, 1184
BspT104I	TTCGAA	1 cut(s)	374
BspT107I	GGYRCC	1 cut(s)	527
BspTI	CTTAAG	2 cut(s)	160, 289
BspTNI	GGTCTC	1 cut(s)	1452
BsrDI	GCAATG	2 cut(s)	283, 1045
BsrI	ACTGG	1 cut(s)	1112
BssECI	CCNNGG	3 cut(s)	179, 233, 729
BssMI	GATC	8 cut(s)	148, 790, 870, 874, 936, 1141, 1189, 1415
BssNAI	GTATAC	2 cut(s)	155, 1180
BssNI	GRCGYC	1 cut(s)	1056
BssT1I	CCWWGG	2 cut(s)	179, 729
Bst1107I	GTATAC	2 cut(s)	155, 1180
Bst2UI	CCWGG	2 cut(s)	235, 642
Bst4CI	ACNGT	3 cut(s)	22, 705, 1046
Bst6I	CTCTTC	2 cut(s)	1011, 1017
BstACI	GRCGYC	1 cut(s)	1056
BstAFI	CTTAAG	2 cut(s)	160, 289
BstBAI	YACGTR	1 cut(s)	146
BstBI	TTCGAA	1 cut(s)	374
BstC8I	GCNNGC	2 cut(s)	176, 719
BstDEI	CTNAG	4 cut(s)	40, 137, 187, 565
BstDSI	CCRYGG	1 cut(s)	179
BstF5I	GGATG	2 cut(s)	207, 464
BstHHI	GCGC	2 cut(s)	201, 824
BstKTI	GATC	8 cut(s)	151, 793, 873, 877, 939, 1144, 1192, 1418
BstMAI	GTCTC	4 cut(s)	61, 89, 639, 1452
BstMBI	GATC	8 cut(s)	148, 790, 870, 874, 936, 1141, 1189, 1415
BstMWI	GCNNNNNNNGC	3 cut(s)	171, 686, 1192
BstNI	CCWGG	2 cut(s)	235, 642
BstNSI	RCATGY	1 cut(s)	1371
BstSCI	CCNGG	2 cut(s)	233, 640
BstSFI	CTRYAG	1 cut(s)	817
BstV1I	GCAGC	3 cut(s)	321, 586, 608
BstV2I	GAAGAC	2 cut(s)	363, 1302
BstZ17I	GTATAC	2 cut(s)	155, 1180
Bsu15I	ATCGAT	1 cut(s)	873
BsuTUI	ATCGAT	1 cut(s)	873
BtgI	CCRYGG	1 cut(s)	179
BtsCI	GGATG	2 cut(s)	207, 464
BtsI	GCAGTG	1 cut(s)	414
BtsIMutI	CAGTG	1 cut(s)	414
Cac8I	GCNNGC	2 cut(s)	176, 719
CciI	TCATGA	2 cut(s)	9, 1338
CfoI	GCGC	2 cut(s)	201, 824
ClaI	ATCGAT	1 cut(s)	873
CseI	GACGC	1 cut(s)	1064
Csp6I	GTAC	3 cut(s)	143, 242, 1217
CspCI	CAANNNNNGTGG	2 cut(s)	1027, 1062
CviAII	CATG	7 cut(s)	10, 115, 180, 308, 1010, 1339, 1368
CviQI	GTAC	3 cut(s)	143, 242, 1217
DdeI	CTNAG	4 cut(s)	40, 137, 187, 565
DpnI	GATC	8 cut(s)	150, 792, 872, 876, 938, 1143, 1191, 1417
DpnII	GATC	8 cut(s)	148, 790, 870, 874, 936, 1141, 1189, 1415
DrdI	GACNNNNNNGTC	1 cut(s)	75
DseDI	GACNNNNNNGTC	1 cut(s)	75
Eam1104I	CTCTTC	2 cut(s)	1011, 1017
EarI	CTCTTC	2 cut(s)	1011, 1017
EciI	GGCGGA	1 cut(s)	929
Eco130I	CCWWGG	2 cut(s)	179, 729
Eco31I	GGTCTC	1 cut(s)	1452
Eco32I	GATATC	2 cut(s)	112, 1285
Eco57I	CTGAAG	1 cut(s)	1285
EcoRI	GAATTC	1 cut(s)	1407
EcoRII	CCWGG	2 cut(s)	233, 640
EcoRV	GATATC	2 cut(s)	112, 1285
EcoT14I	CCWWGG	2 cut(s)	179, 729
ErhI	CCWWGG	2 cut(s)	179, 729
FaeI	CATG	7 cut(s)	13, 118, 183, 311, 1013, 1342, 1371
FatI	CATG	7 cut(s)	9, 114, 179, 307, 1009, 1338, 1367
FblI	GTMKAC	2 cut(s)	154, 1179
Fnu4HI	GCNGC	4 cut(s)	335, 597, 600, 1003
FokI	GGATG	2 cut(s)	194, 451
Fsp4HI	GCNGC	4 cut(s)	335, 597, 600, 1003
FspBI	CTAG	2 cut(s)	167, 213
FspI	TGCGCA	1 cut(s)	200
GlaI	GCGC	2 cut(s)	200, 823
GluI	GCNGC	4 cut(s)	335, 597, 600, 1003
GsaI	CCCAGC	1 cut(s)	94
GsuI	CTGGAG	1 cut(s)	663
HapII	CCGG	1 cut(s)	753
HgaI	GACGC	1 cut(s)	1064
HhaI	GCGC	2 cut(s)	201, 824
Hin1I	GRCGYC	1 cut(s)	1056
Hin1II	CATG	7 cut(s)	13, 118, 183, 311, 1013, 1342, 1371
Hin6I	GCGC	2 cut(s)	199, 822
HinP1I	GCGC	2 cut(s)	199, 822
HincII	GTYRAC	1 cut(s)	892
HindII	GTYRAC	1 cut(s)	892
HindIII	AAGCTT	2 cut(s)	292, 687
HinfI	GANTC	6 cut(s)	257, 447, 478, 893, 908, 1441
HpaII	CCGG	1 cut(s)	753
HphI	GGTGA	6 cut(s)	70, 872, 983, 1061, 1106, 1115
Hpy166II	GTNNAC	7 cut(s)	143, 155, 407, 892, 1180, 1346, 1464
Hpy188I	TCNGA	4 cut(s)	568, 580, 1304, 1425
Hpy188III	TCNNGA	5 cut(s)	10, 444, 490, 1339, 1373
Hpy8I	GTNNAC	7 cut(s)	143, 155, 407, 892, 1180, 1346, 1464
HpyAV	CCTTC	3 cut(s)	1028, 1076, 1280
HpyCH4III	ACNGT	3 cut(s)	22, 705, 1046
HpyCH4IV	ACGT	2 cut(s)	145, 776
HpyCH4V	TGCA	8 cut(s)	174, 276, 419, 636, 680, 914, 1314, 1325
HpyF10VI	GCNNNNNNNGC	3 cut(s)	171, 686, 1192
HpyF3I	CTNAG	4 cut(s)	40, 137, 187, 565
HpySE526I	ACGT	2 cut(s)	145, 776
Hsp92I	GRCGYC	1 cut(s)	1056
Hsp92II	CATG	7 cut(s)	13, 118, 183, 311, 1013, 1342, 1371
HspAI	GCGC	2 cut(s)	199, 822
Kzo9I	GATC	8 cut(s)	148, 790, 870, 874, 936, 1141, 1189, 1415
LmnI	GCTCC	4 cut(s)	183, 331, 353, 775
Lsp1109I	GCAGC	3 cut(s)	321, 586, 608
LweI	GCATC	2 cut(s)	667, 1122
MaeI	CTAG	2 cut(s)	167, 213
MaeII	ACGT	2 cut(s)	145, 776
MaeIII	GTNAC	4 cut(s)	77, 860, 971, 1103
MalI	GATC	8 cut(s)	150, 792, 872, 876, 938, 1143, 1191, 1417
MboI	GATC	8 cut(s)	148, 790, 870, 874, 936, 1141, 1189, 1415
MboII	GAAGA	6 cut(s)	363, 520, 1028, 1034, 1307, 1416
MfeI	CAATTG	1 cut(s)	1456
MluCI	AATT	9 cut(s)	438, 574, 781, 803, 1204, 1309, 1333, 1407, 1456
MlyI	GAGTC	3 cut(s)	456, 887, 917
MmeI	TCCRAC	2 cut(s)	309, 475
MroXI	GAANNNNTTC	1 cut(s)	345
MseI	TTAA	8 cut(s)	15, 63, 161, 290, 324, 396, 573, 812
MslI	CAYNNNNRTG	3 cut(s)	138, 1366, 1469
MspA1I	CMGCKG	1 cut(s)	599
MspCI	CTTAAG	2 cut(s)	160, 289
MspI	CCGG	1 cut(s)	753
MspR9I	CCNGG	2 cut(s)	235, 642
MunI	CAATTG	1 cut(s)	1456
MvaI	CCWGG	2 cut(s)	235, 642
MwoI	GCNNNNNNNGC	3 cut(s)	171, 686, 1192
NcoI	CCATGG	1 cut(s)	179
NdeII	GATC	8 cut(s)	148, 790, 870, 874, 936, 1141, 1189, 1415
NlaIII	CATG	7 cut(s)	13, 118, 183, 311, 1013, 1342, 1371
NlaIV	GGNNCC	1 cut(s)	529
NmuCI	GTSAC	4 cut(s)	77, 860, 971, 1103
NsbI	TGCGCA	1 cut(s)	200
NspI	RCATGY	1 cut(s)	1371
NspV	TTCGAA	1 cut(s)	374
OliI	CACNNNNGTG	1 cut(s)	138
PagI	TCATGA	2 cut(s)	9, 1338
PciI	ACATGT	1 cut(s)	1367
PdmI	GAANNNNTTC	1 cut(s)	345
PfeI	GAWTC	3 cut(s)	257, 478, 1441
PkrI	GCNGC	4 cut(s)	336, 598, 601, 1004
PleI	GAGTC	3 cut(s)	455, 887, 916
PpsI	GAGTC	3 cut(s)	455, 887, 916
Ppu21I	YACGTR	1 cut(s)	146
PscI	ACATGT	1 cut(s)	1367
PshBI	ATTAAT	2 cut(s)	573, 812
PsiI	TTATAA	1 cut(s)	1477
Psp6I	CCWGG	2 cut(s)	233, 640
PspFI	CCCAGC	1 cut(s)	90
PspGI	CCWGG	2 cut(s)	233, 640
PspN4I	GGNNCC	1 cut(s)	529
PvuII	CAGCTG	1 cut(s)	599
RsaI	GTAC	3 cut(s)	144, 243, 1218
RsaNI	GTAC	3 cut(s)	143, 242, 1217
RseI	CAYNNNNRTG	3 cut(s)	138, 1366, 1469
SaqAI	TTAA	8 cut(s)	15, 63, 161, 290, 324, 396, 573, 812
SatI	GCNGC	4 cut(s)	335, 597, 600, 1003
Sau3AI	GATC	8 cut(s)	148, 790, 870, 874, 936, 1141, 1189, 1415
ScaI	AGTACT	1 cut(s)	243
SchI	GAGTC	3 cut(s)	456, 887, 917
ScrFI	CCNGG	2 cut(s)	235, 642
SfaNI	GCATC	2 cut(s)	667, 1122
SfcI	CTRYAG	1 cut(s)	817
SfuI	TTCGAA	1 cut(s)	374
SmiMI	CAYNNNNRTG	3 cut(s)	138, 1366, 1469
SmlI	CTYRAG	4 cut(s)	160, 261, 289, 469
SmoI	CTYRAG	4 cut(s)	160, 261, 289, 469
Sse9I	AATT	9 cut(s)	438, 574, 781, 803, 1204, 1309, 1333, 1407, 1456
SsiI	CCGC	4 cut(s)	33, 940, 1002, 1193
SspI	AATATT	3 cut(s)	661, 854, 1120
SspMI	CTAG	2 cut(s)	167, 213
StyD4I	CCNGG	2 cut(s)	233, 640
StyI	CCWWGG	2 cut(s)	179, 729
TaaI	ACNGT	3 cut(s)	22, 705, 1046
TaiI	ACGT	2 cut(s)	148, 779
TaqI	TCGA	6 cut(s)	364, 374, 873, 962, 1032, 1439
TaqII	GACCGA	1 cut(s)	1434
TasI	AATT	9 cut(s)	438, 574, 781, 803, 1204, 1309, 1333, 1407, 1456
TatI	WGTACW	1 cut(s)	241
TauI	GCSGC	1 cut(s)	1005
TfiI	GAWTC	3 cut(s)	257, 478, 1441
Tru1I	TTAA	8 cut(s)	15, 63, 161, 290, 324, 396, 573, 812
Tru9I	TTAA	8 cut(s)	15, 63, 161, 290, 324, 396, 573, 812
TscAI	CASTG	1 cut(s)	421
TseFI	GTSAC	4 cut(s)	77, 860, 971, 1103
TseI	GCWGC	3 cut(s)	334, 596, 599
Tsp45I	GTSAC	4 cut(s)	77, 860, 971, 1103
TspDTI	ATGAA	5 cut(s)	597, 699, 939, 1251, 1327
TspGWI	ACGGA	2 cut(s)	65, 471
TspRI	CASTG	1 cut(s)	421
Vha464I	CTTAAG	2 cut(s)	160, 289
VspI	ATTAAT	2 cut(s)	573, 812
XapI	RAATTY	2 cut(s)	781, 1407
XceI	RCATGY	1 cut(s)	1371
XcmI	CCANNNNNNNNNTGG	1 cut(s)	622
XmiI	GTMKAC	2 cut(s)	154, 1179
XmnI	GAANNNNTTC	1 cut(s)	345
XspI	CTAG	2 cut(s)	167, 213
ZrmI	AGTACT	1 cut(s)	243

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.