Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0013397

Physical Location & Seq

Genomic Coordinates Reverse (-)

8226086 .. 8227642

Gene Structure 1557 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g08330.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1557 bp

ATGAAAGAGTACTGGACTTCCTTGGCCTCCCTTCTGGGAGTGTTGGCCTTCTGCCAGAGCCTCCTCCAGACCGTGTTCCCGCCGGAGCTCCGGTTCGCTTTCCTGAAACTAGCCAGCAAAATCTTCCACTGGTTCTCCTCTTACTACTACTTCGACATCACCGAGATCGACGGCGTCAACACCAACGAGCTCTACAACGCCGTCCAGCTCTACCTCAGCGCCACCGTCTCCGTCACCGGCACACGCCTCAGCCTCACGCGCGCCCTCAACTCCTCCGCCATCACCTTCGGCCTCTCTAACAACGACTGCATGGTCGACACCTTCAACGGCGTCACCGTCCTCTGGGAACATGTCGTCACCCAGCGACAGTCTCAGACCTTCTCCTGGCGCCCATTGCCCGAAGAGAAGCGAGGCTTCACTTTAAGGATCAAGAAGAAAGACAAGTTCTTGATCCTCAACTCTTACTTGGACTTCATCATGGACAAGGCCAATGACATCCGCCGCAGGAACCAAGATCGCCTTCTTTACACCAACTCACGAGGTGGGTCGTTGGATTCCCGAGGCCATCCCTGGGAATCCGTGCCGTTCAAGCACCCGAGCACTTTCGACACTTTGGCTATGGACCCGAAAGTGAAGAAAGAGATCATGGAGGATTTGCAGGACTTCGCTAATGGACAGAGCTTTTATCAGAAGACCGGACGGGCCTGGAAAAGAGGGTATCTTTTGTATGGCCCACCCGGTACTGGAAAGTCCAGCATGATTGCAGCCATGGCTAATTTTCTTGGGTATGATATCTATGATCTTGAGCTCACTGAGGTTCATACCAACTCTGAGCTGAGGAAGTTGCTGATGAAGACTAGTTCCAAGTCTGTTATTGTCATTGAGGATATAGATTGCTCTATCAATCTGACTAACAGGAAGAAGAATGGTGGTGGTGATGCTAGTGGTGGTGCAGCTATGAGGACTTATTACAACTCGCCGGAAATGAGAGGCGTTTCCGGGGAGGAAGGTGGTGGGAATTCGATTACGCTTTCCGGGTTGTTGAATTTCACTGATGGATTGTGGTCATGTTGTGGGAGTGAGAGGATTTTCGTGTTTACGACGAATCATATTGAGAAGTTAGACCCTGCATTGCTGAGGAGTGGAAGGATGGATATGCATATATTCATGAGTCACTGCTCATTCCCGGCATTGAAGATACTGCTGAAGAATTATTTGGGATTTGAGGAGGGTGATTTGGATGAGGAGATTGCAAAAGAGTTTGAAGAGGTTTTGGACAAGGCGGGGATGACTCCAGCGGATGTGAGTGAAGCTTTGATCAAGAACAGACGCGATAAGGATAAGGCGGTGAGGGAGTTGTTGGAGGTGTTGAAGGTGAAGGCTGAGAAGAACAAGAAGAGCAATGCAGGTTCAGCTGAGGAGGAAGAAGAGGAGCAGGAGAAGAGGGCATTGGAGAGTCCTAAAGTTGAAGGGTGTGGCTTTGAGGAGGAGGACAGCAGCTGCAAGAAAGGTGGTGATGAGGATCAGAAGCAAGATGATGAGAAAATAGAAAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006810 GO:0008104 GO:0008150 GO:0008320 GO:0008565 GO:0009987 GO:0015031 GO:0015833 GO:0016043 GO:0022607 GO:0022857 GO:0022884 GO:0033036 GO:0034622 GO:0042886 GO:0042887 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044424 GO:0044444 GO:0044464 GO:0045184 GO:0051131 GO:0051179 GO:0051234 GO:0055085 GO:0065003 GO:0071702 GO:0071705 GO:0071806 GO:0071840 GO:1904680

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA AAA_assoc

Protein Analysis

519

Amino Acids

58.5

Weight (kDa)

5.49

Isoelectric Point (pI)

49.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA_assoc	PF14363	26 - 118	8.7e-22	Domain associated at C-terminal with AAA
AAA	PF00004	240 - 390	6.3e-18	ATPase family associated with various cellular activities (AAA)
AAA_lid_At3g28540	PF25568	393 - 466	2.2e-12	At3g28540-like, AAA+ ATPase lid domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013397)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G25835 AT4G30250 AT4G30250 AT5G57480
fragaria_vesca	FvH4_4g08330
malus_domestica	MD13G1255400.v1.1
prunus_persica	Prupe.1G086500_v2.0.a1
pyrus_communis	pycom13g22720
rosa_chinensis	RchiOBHm_Chr4g0402591
rosa_laevigata	RLG00000009064
rosa_multiflora	Rmu_co8332339.1_g000001 Rmu_sc0004921.1_g000012
rosa_roxburghii	Rroxscaffold_5G00347310
rosa_rugosa	Rorug04G0036900
rosa_samantha	Rh4AG114500 Rh4BG106800 Rh4DG106700
rosa_wichuraiana	Rw4G009130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	311
Acc36I	ACCTGC	1 cut(s)	1397
AccB1I	GGYRCC	1 cut(s)	387
AccI	GTMKAC	1 cut(s)	315
AccII	CGCG	3 cut(s)	259, 261, 1332
AciI	CCGC	7 cut(s)	80, 276, 499, 502, 1283, 1298, 1346
AclWI	GGATC	3 cut(s)	434, 445, 1530
AcsI	RAATTY	2 cut(s)	1018, 1045
AcuI	CTGAAG	1 cut(s)	1226
AcyI	GRCGYC	3 cut(s)	174, 330, 388
AdeI	CACNNNGTG	1 cut(s)	542
AfaI	GTAC	2 cut(s)	11, 742
AfiI	CCNNNNNNNGG	4 cut(s)	342, 384, 571, 743
AflIII	ACRYGT	1 cut(s)	349
AgsI	TTSAA	7 cut(s)	325, 589, 1045, 1195, 1265, 1372, 1469
AhlI	ACTAGT	1 cut(s)	857
AjnI	CCWGG	3 cut(s)	383, 569, 704
AjuI	GAANNNNNNNTTGG	6 cut(s)	504, 536, 1199, 1231, 1433, 1465
AloI	GAACNNNNNNTCC	2 cut(s)	77, 109
Alw21I	GWGCWC	4 cut(s)	90, 192, 602, 810
Alw26I	GTCTC	2 cut(s)	232, 375
AlwI	GGATC	3 cut(s)	434, 445, 1530
AlwNI	CAGNNNCTG	1 cut(s)	1500
Ama87I	CYCGRG	2 cut(s)	558, 595
AoxI	GGCC	7 cut(s)	24, 45, 289, 486, 562, 702, 730
ApeKI	GCWGC	4 cut(s)	764, 953, 1497, 1500
ApoI	RAATTY	2 cut(s)	1018, 1045
AspLEI	GCGC	4 cut(s)	221, 261, 263, 390
AspS9I	GGNCC	3 cut(s)	622, 702, 731
AsuC2I	CCSGG	4 cut(s)	738, 1000, 1036, 1187
AvaI	CYCGRG	2 cut(s)	558, 595
AvaII	GGWCC	1 cut(s)	622
BanI	GGYRCC	1 cut(s)	387
BanII	GRGCYC	3 cut(s)	90, 192, 810
BauI	CACGAG	1 cut(s)	537
BbsI	GAAGAC	2 cut(s)	698, 860
Bbv12I	GWGCWC	4 cut(s)	90, 192, 602, 810
BbvCI	CCTCAGC	5 cut(s)	215, 248, 836, 1136, 1416
BbvI	GCAGC	4 cut(s)	776, 965, 1487, 1509
BccI	CCATC	4 cut(s)	287, 573, 1049, 1144
BceAI	ACGGC	4 cut(s)	185, 187, 343, 568
BciT130I	CCWGG	3 cut(s)	385, 571, 706
BclI	TGATCA	1 cut(s)	1317
BcnI	CCSGG	4 cut(s)	738, 1000, 1036, 1187
BcoDI	GTCTC	2 cut(s)	232, 375
BcuI	ACTAGT	1 cut(s)	857
BfaI	CTAG	3 cut(s)	110, 858, 942
BfoI	RGCGCY	2 cut(s)	222, 391
BfuAI	ACCTGC	1 cut(s)	1397
BisI	GCNGC	5 cut(s)	502, 765, 954, 1498, 1501
BlsI	GCNGC	5 cut(s)	503, 766, 955, 1499, 1502
BmcAI	AGTACT	1 cut(s)	11
Bme1390I	CCNGG	7 cut(s)	385, 571, 706, 738, 1000, 1036, 1187
Bme18I	GGWCC	1 cut(s)	622
BmeT110I	CYCGRG	2 cut(s)	558, 595
BmgT120I	GGNCC	3 cut(s)	622, 702, 731
BmiI	GGNNCC	3 cut(s)	389, 509, 624
BmrFI	CCNGG	7 cut(s)	385, 571, 706, 738, 1000, 1036, 1187
BmsI	GCATC	1 cut(s)	928
BpiI	GAAGAC	2 cut(s)	698, 860
BpmI	CTGGAG	2 cut(s)	50, 1278
Bpu10I	CCTNAGC	5 cut(s)	215, 248, 836, 1136, 1416
BpuEI	CTTGAG	1 cut(s)	824
BpuMI	CCSGG	4 cut(s)	738, 1000, 1036, 1187
BsaBI	GATNNNNATC	1 cut(s)	1521
BsaHI	GRCGYC	3 cut(s)	174, 330, 388
BsaJI	CCNNGG	6 cut(s)	21, 559, 569, 570, 768, 999
BsaWI	WCCGGW	2 cut(s)	90, 695
BsaXI	ACNNNNNCTCC	4 cut(s)	77, 107, 119, 149
Bsc4I	CCNNNNNNNGG	4 cut(s)	342, 384, 571, 743
Bse118I	RCCGGY	1 cut(s)	236
Bse1I	ACTGG	3 cut(s)	17, 134, 748
Bse3DI	GCAATG	3 cut(s)	392, 1130, 1408
Bse8I	GATNNNNATC	1 cut(s)	1521
BseBI	CCWGG	3 cut(s)	385, 571, 706
BseDI	CCNNGG	6 cut(s)	21, 559, 569, 570, 768, 999
BseGI	GGATG	6 cut(s)	495, 565, 1155, 1246, 1293, 1306
BseJI	GATNNNNATC	1 cut(s)	1521
BseLI	CCNNNNNNNGG	4 cut(s)	342, 384, 571, 743
BseMI	GCAATG	3 cut(s)	392, 1130, 1408
BseMII	CTCAG	9 cut(s)	229, 262, 386, 804, 822, 827, 1127, 1374, 1407
BseNI	ACTGG	3 cut(s)	17, 134, 748
BsePI	GCGCGC	1 cut(s)	259
BseXI	GCAGC	4 cut(s)	776, 965, 1487, 1509
BseYI	CCCAGC	1 cut(s)	360
BsgI	GTGCAG	1 cut(s)	972
Bsh1236I	CGCG	3 cut(s)	259, 261, 1332
BshFI	GGCC	7 cut(s)	26, 47, 291, 488, 564, 704, 732
BshNI	GGYRCC	1 cut(s)	387
BsiHKAI	GWGCWC	4 cut(s)	90, 192, 602, 810
BsiHKCI	CYCGRG	2 cut(s)	558, 595
BsiSI	CCGG	9 cut(s)	83, 91, 237, 696, 738, 980, 999, 1035, 1187
BslI	CCNNNNNNNGG	4 cut(s)	342, 384, 571, 743
BsmAI	GTCTC	2 cut(s)	232, 375
BsmBI	CGTCTC	1 cut(s)	232
BsnI	GGCC	7 cut(s)	26, 47, 291, 488, 564, 704, 732
BsoBI	CYCGRG	2 cut(s)	558, 595
Bsp1286I	GDGCHC	4 cut(s)	90, 192, 602, 810
Bsp143I	GATC	8 cut(s)	165, 426, 450, 514, 642, 799, 1317, 1522
Bsp19I	CCATGG	1 cut(s)	768
BspACI	CCGC	7 cut(s)	80, 276, 499, 502, 1283, 1298, 1346
BspANI	GGCC	7 cut(s)	26, 47, 291, 488, 564, 704, 732
BspCNI	CTCAG	9 cut(s)	228, 261, 385, 805, 823, 828, 1128, 1375, 1408
BspFNI	CGCG	3 cut(s)	259, 261, 1332
BspHI	TCATGA	1 cut(s)	1167
BspLI	GGNNCC	3 cut(s)	389, 509, 624
BspMI	ACCTGC	1 cut(s)	1397
BspPI	GGATC	3 cut(s)	434, 445, 1530
BspQI	GCTCTTC	1 cut(s)	1391
BspT107I	GGYRCC	1 cut(s)	387
BsrDI	GCAATG	3 cut(s)	392, 1130, 1408
BsrFI	RCCGGY	1 cut(s)	236
BsrI	ACTGG	3 cut(s)	17, 134, 748
BssAI	RCCGGY	1 cut(s)	236
BssECI	CCNNGG	6 cut(s)	21, 559, 569, 570, 768, 999
BssHII	GCGCGC	1 cut(s)	259
BssMI	GATC	8 cut(s)	165, 426, 450, 514, 642, 799, 1317, 1522
BssNI	GRCGYC	3 cut(s)	174, 330, 388
BssSI	CACGAG	1 cut(s)	537
BssT1I	CCWWGG	2 cut(s)	21, 768
Bst2BI	CACGAG	1 cut(s)	537
Bst2UI	CCWGG	3 cut(s)	385, 571, 706
Bst4CI	ACNGT	4 cut(s)	73, 226, 337, 369
Bst6I	CTCTTC	5 cut(s)	396, 1260, 1391, 1422, 1436
BstACI	GRCGYC	3 cut(s)	174, 330, 388
BstC8I	GCNNGC	2 cut(s)	115, 261
BstDEI	CTNAG	9 cut(s)	215, 248, 372, 813, 831, 836, 1136, 1383, 1416
BstDSI	CCRYGG	1 cut(s)	768
BstF5I	GGATG	6 cut(s)	495, 565, 1155, 1246, 1293, 1306
BstFNI	CGCG	3 cut(s)	259, 261, 1332
BstH2I	RGCGCY	2 cut(s)	222, 391
BstHHI	GCGC	4 cut(s)	221, 261, 263, 390
BstKTI	GATC	8 cut(s)	168, 429, 453, 517, 645, 802, 1320, 1525
BstMAI	GTCTC	2 cut(s)	232, 375
BstMBI	GATC	8 cut(s)	165, 426, 450, 514, 642, 799, 1317, 1522
BstMWI	GCNNNNNNNGC	5 cut(s)	258, 394, 589, 770, 1412
BstNI	CCWGG	3 cut(s)	385, 571, 706
BstNSI	RCATGY	1 cut(s)	353
BstSCI	CCNGG	7 cut(s)	383, 569, 704, 736, 998, 1034, 1185
BstUI	CGCG	3 cut(s)	259, 261, 1332
BstV1I	GCAGC	4 cut(s)	776, 965, 1487, 1509
BstV2I	GAAGAC	2 cut(s)	698, 860
BsuRI	GGCC	7 cut(s)	26, 47, 291, 488, 564, 704, 732
BtgI	CCRYGG	1 cut(s)	768
BtsCI	GGATG	6 cut(s)	495, 565, 1155, 1246, 1293, 1306
BtsI	GCAGTG	1 cut(s)	1174
BtsIMutI	CAGTG	4 cut(s)	127, 810, 1050, 1174
BveI	ACCTGC	1 cut(s)	1397
Cac8I	GCNNGC	2 cut(s)	115, 261
CaiI	CAGNNNCTG	1 cut(s)	1500
CciI	TCATGA	1 cut(s)	1167
CfoI	GCGC	4 cut(s)	221, 261, 263, 390
Cfr10I	RCCGGY	1 cut(s)	236
Cfr13I	GGNCC	3 cut(s)	622, 702, 731
CseI	GACGC	3 cut(s)	163, 319, 1338
Csp6I	GTAC	2 cut(s)	10, 741
CspCI	CAANNNNNGTGG	2 cut(s)	1492, 1527
CviAII	CATG	8 cut(s)	310, 350, 478, 646, 757, 769, 1068, 1168
CviQI	GTAC	2 cut(s)	10, 741
DdeI	CTNAG	9 cut(s)	215, 248, 372, 813, 831, 836, 1136, 1383, 1416
DinI	GGCGCC	1 cut(s)	389
DpnI	GATC	8 cut(s)	167, 428, 452, 516, 644, 801, 1319, 1524
DpnII	GATC	8 cut(s)	165, 426, 450, 514, 642, 799, 1317, 1522
DraIII	CACNNNGTG	1 cut(s)	542
DrdI	GACNNNNNNGTC	1 cut(s)	311
DseDI	GACNNNNNNGTC	1 cut(s)	311
Eam1104I	CTCTTC	5 cut(s)	396, 1260, 1391, 1422, 1436
EarI	CTCTTC	5 cut(s)	396, 1260, 1391, 1422, 1436
EciI	GGCGGA	2 cut(s)	265, 488
Ecl136II	GAGCTC	3 cut(s)	88, 190, 808
Eco130I	CCWWGG	2 cut(s)	21, 768
Eco24I	GRGCYC	3 cut(s)	90, 192, 810
Eco32I	GATATC	1 cut(s)	793
Eco47I	GGWCC	1 cut(s)	622
Eco53kI	GAGCTC	3 cut(s)	88, 190, 808
Eco57I	CTGAAG	1 cut(s)	1226
Eco88I	CYCGRG	2 cut(s)	558, 595
EcoICRI	GAGCTC	3 cut(s)	88, 190, 808
EcoRI	GAATTC	1 cut(s)	1018
EcoRII	CCWGG	3 cut(s)	383, 569, 704
EcoRV	GATATC	1 cut(s)	793
EcoT14I	CCWWGG	2 cut(s)	21, 768
EcoT22I	ATGCAT	1 cut(s)	1161
EcoT38I	GRGCYC	3 cut(s)	90, 192, 810
EgeI	GGCGCC	1 cut(s)	389
EheI	GGCGCC	1 cut(s)	389
ErhI	CCWWGG	2 cut(s)	21, 768
Esp3I	CGTCTC	1 cut(s)	232
FaeI	CATG	8 cut(s)	313, 353, 481, 649, 760, 772, 1071, 1171
FalI	AAGNNNNNCTT	4 cut(s)	398, 430, 504, 536
FatI	CATG	8 cut(s)	309, 349, 477, 645, 756, 768, 1067, 1167
FauI	CCCGC	2 cut(s)	87, 1276
FbaI	TGATCA	1 cut(s)	1317
FblI	GTMKAC	1 cut(s)	315
Fnu4HI	GCNGC	5 cut(s)	502, 765, 954, 1498, 1501
FokI	GGATG	6 cut(s)	482, 552, 1162, 1253, 1300, 1313
FriOI	GRGCYC	3 cut(s)	90, 192, 810
Fsp4HI	GCNGC	5 cut(s)	502, 765, 954, 1498, 1501
FspBI	CTAG	3 cut(s)	110, 858, 942
GlaI	GCGC	4 cut(s)	220, 260, 262, 389
GluI	GCNGC	5 cut(s)	502, 765, 954, 1498, 1501
GsaI	CCCAGC	1 cut(s)	364
GsuI	CTGGAG	2 cut(s)	50, 1278
HaeII	RGCGCY	2 cut(s)	222, 391
HaeIII	GGCC	7 cut(s)	26, 47, 291, 488, 564, 704, 732
HapII	CCGG	9 cut(s)	83, 91, 237, 696, 738, 980, 999, 1035, 1187
HgaI	GACGC	3 cut(s)	163, 319, 1338
HhaI	GCGC	4 cut(s)	221, 261, 263, 390
Hin1I	GRCGYC	3 cut(s)	174, 330, 388
Hin1II	CATG	8 cut(s)	313, 353, 481, 649, 760, 772, 1071, 1171
Hin6I	GCGC	4 cut(s)	219, 259, 261, 388
HinP1I	GCGC	4 cut(s)	219, 259, 261, 388
HincII	GTYRAC	2 cut(s)	178, 316
HindII	GTYRAC	2 cut(s)	178, 316
HindIII	AAGCTT	1 cut(s)	1311
HinfI	GANTC	6 cut(s)	554, 575, 1105, 1171, 1291, 1456
HpaII	CCGG	9 cut(s)	83, 91, 237, 696, 738, 980, 999, 1035, 1187
Hpy166II	GTNNAC	3 cut(s)	178, 316, 1098
Hpy188I	TCNGA	5 cut(s)	375, 690, 832, 909, 1527
Hpy188III	TCNNGA	9 cut(s)	67, 103, 430, 448, 537, 558, 803, 1168, 1321
Hpy8I	GTNNAC	3 cut(s)	178, 316, 1098
Hpy99I	CGWCG	2 cut(s)	173, 1105
HpyCH4III	ACNGT	4 cut(s)	73, 226, 337, 369
HpyCH4V	TGCA	9 cut(s)	309, 658, 764, 953, 1130, 1159, 1253, 1406, 1503
HpyF10VI	GCNNNNNNNGC	5 cut(s)	258, 394, 589, 770, 1412
HpyF3I	CTNAG	9 cut(s)	215, 248, 372, 813, 831, 836, 1136, 1383, 1416
Hsp92I	GRCGYC	3 cut(s)	174, 330, 388
Hsp92II	CATG	8 cut(s)	313, 353, 481, 649, 760, 772, 1071, 1171
HspAI	GCGC	4 cut(s)	219, 259, 261, 388
KasI	GGCGCC	1 cut(s)	387
Ksp22I	TGATCA	1 cut(s)	1317
Kzo9I	GATC	8 cut(s)	165, 426, 450, 514, 642, 799, 1317, 1522
LguI	GCTCTTC	1 cut(s)	1391
LmnI	GCTCC	3 cut(s)	85, 93, 1432
Lsp1109I	GCAGC	4 cut(s)	776, 965, 1487, 1509
LweI	GCATC	1 cut(s)	928
MaeI	CTAG	3 cut(s)	110, 858, 942
MaeIII	GTNAC	4 cut(s)	232, 331, 355, 1172
MalI	GATC	8 cut(s)	167, 428, 452, 516, 644, 801, 1319, 1524
MboI	GATC	8 cut(s)	165, 426, 450, 514, 642, 799, 1317, 1522
MhlI	GDGCHC	4 cut(s)	90, 192, 602, 810
MluCI	AATT	4 cut(s)	775, 1018, 1045, 1210
Mly113I	GGCGCC	1 cut(s)	388
MlyI	GAGTC	3 cut(s)	1180, 1285, 1465
MmeI	TCCRAC	2 cut(s)	531, 1341
Mph1103I	ATGCAT	1 cut(s)	1161
MseI	TTAA	1 cut(s)	422
MspA1I	CMGCKG	3 cut(s)	1298, 1415, 1500
MspI	CCGG	9 cut(s)	83, 91, 237, 696, 738, 980, 999, 1035, 1187
MspR9I	CCNGG	7 cut(s)	385, 571, 706, 738, 1000, 1036, 1187
MvaI	CCWGG	3 cut(s)	385, 571, 706
MvnI	CGCG	3 cut(s)	259, 261, 1332
MwoI	GCNNNNNNNGC	5 cut(s)	258, 394, 589, 770, 1412
NarI	GGCGCC	1 cut(s)	388
NciI	CCSGG	4 cut(s)	738, 1000, 1036, 1187
NcoI	CCATGG	1 cut(s)	768
NdeII	GATC	8 cut(s)	165, 426, 450, 514, 642, 799, 1317, 1522
NlaIII	CATG	8 cut(s)	313, 353, 481, 649, 760, 772, 1071, 1171
NlaIV	GGNNCC	3 cut(s)	389, 509, 624
NmuCI	GTSAC	4 cut(s)	232, 331, 355, 1172
NsiI	ATGCAT	1 cut(s)	1161
NspI	RCATGY	1 cut(s)	353
PagI	TCATGA	1 cut(s)	1167
PasI	CCCWGGG	1 cut(s)	570
PauI	GCGCGC	1 cut(s)	259
PciI	ACATGT	1 cut(s)	349
PciSI	GCTCTTC	1 cut(s)	1391
PcsI	WCGNNNNNNNCGW	2 cut(s)	159, 333
PfeI	GAWTC	3 cut(s)	554, 575, 1105
PflFI	GACNNNGTC	1 cut(s)	173
PkrI	GCNGC	5 cut(s)	503, 766, 955, 1499, 1502
PleI	GAGTC	3 cut(s)	1179, 1285, 1464
PluTI	GGCGCC	1 cut(s)	391
PpsI	GAGTC	3 cut(s)	1179, 1285, 1464
PscI	ACATGT	1 cut(s)	349
Psp124BI	GAGCTC	3 cut(s)	90, 192, 810
Psp6I	CCWGG	3 cut(s)	383, 569, 704
PspFI	CCCAGC	1 cut(s)	360
PspGI	CCWGG	3 cut(s)	383, 569, 704
PspN4I	GGNNCC	3 cut(s)	389, 509, 624
PspPI	GGNCC	3 cut(s)	622, 702, 731
PstNI	CAGNNNCTG	1 cut(s)	1500
PsyI	GACNNNGTC	1 cut(s)	173
PteI	GCGCGC	1 cut(s)	259
PvuII	CAGCTG	2 cut(s)	1415, 1500
RsaI	GTAC	2 cut(s)	11, 742
RsaNI	GTAC	2 cut(s)	10, 741
SacI	GAGCTC	3 cut(s)	90, 192, 810
SalI	GTCGAC	1 cut(s)	314
SapI	GCTCTTC	1 cut(s)	1391
SaqAI	TTAA	1 cut(s)	422
SatI	GCNGC	5 cut(s)	502, 765, 954, 1498, 1501
Sau3AI	GATC	8 cut(s)	165, 426, 450, 514, 642, 799, 1317, 1522
Sau96I	GGNCC	3 cut(s)	622, 702, 731
ScaI	AGTACT	1 cut(s)	11
SchI	GAGTC	3 cut(s)	1180, 1285, 1465
ScrFI	CCNGG	7 cut(s)	385, 571, 706, 738, 1000, 1036, 1187
SduI	GDGCHC	4 cut(s)	90, 192, 602, 810
SfaNI	GCATC	1 cut(s)	928
SfoI	GGCGCC	1 cut(s)	389
SinI	GGWCC	1 cut(s)	622
SmlI	CTYRAG	1 cut(s)	803
SmoI	CTYRAG	1 cut(s)	803
SpeI	ACTAGT	1 cut(s)	857
Sse9I	AATT	4 cut(s)	775, 1018, 1045, 1210
SsiI	CCGC	7 cut(s)	80, 276, 499, 502, 1283, 1298, 1346
SspDI	GGCGCC	1 cut(s)	387
SspMI	CTAG	3 cut(s)	110, 858, 942
SstI	GAGCTC	3 cut(s)	90, 192, 810
StyD4I	CCNGG	7 cut(s)	383, 569, 704, 736, 998, 1034, 1185
StyI	CCWWGG	2 cut(s)	21, 768
TaaI	ACNGT	4 cut(s)	73, 226, 337, 369
TaqI	TCGA	5 cut(s)	153, 168, 315, 606, 1022
TasI	AATT	4 cut(s)	775, 1018, 1045, 1210
TatI	WGTACW	1 cut(s)	9
TauI	GCSGC	1 cut(s)	504
TfiI	GAWTC	3 cut(s)	554, 575, 1105
Tru1I	TTAA	1 cut(s)	422
Tru9I	TTAA	1 cut(s)	422
TscAI	CASTG	4 cut(s)	134, 817, 1057, 1181
TseFI	GTSAC	4 cut(s)	232, 331, 355, 1172
TseI	GCWGC	4 cut(s)	764, 953, 1497, 1500
Tsp45I	GTSAC	4 cut(s)	232, 331, 355, 1172
TspDTI	ATGAA	5 cut(s)	17, 463, 809, 866, 1156
TspGWI	ACGGA	2 cut(s)	220, 568
TspRI	CASTG	4 cut(s)	134, 817, 1057, 1181
Tth111I	GACNNNGTC	1 cut(s)	173
VpaK11BI	GGWCC	1 cut(s)	622
XapI	RAATTY	2 cut(s)	1018, 1045
XceI	RCATGY	1 cut(s)	353
XmiI	GTMKAC	1 cut(s)	315
XspI	CTAG	3 cut(s)	110, 858, 942
ZrmI	AGTACT	1 cut(s)	11
Zsp2I	ATGCAT	1 cut(s)	1161

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.