Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0013397

Physical Location & Seq

Genomic Coordinates Reverse (-)

18640371 .. 18641951

Gene Structure 1581 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00347310.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1581 bp

ATGAAAGAGTACTGGACCTCCCTGGCATCCCTTCTAGGAGTGTTGGCCTTCTGCCAGAGCCTCCTCCAAACCGTGTTCCCGCCGGAGCTCCGGTTCGCTTTTCTGAAACTGGCCAGCAAAATCTTCCACTGGTTCTCCTCCTACTACTACTTCGACATCACCGAGATCGACGGCGTGAACACCAACGAGCTCTACAACGCCGTCCAGCTCTACCTGAGCGCCACCGTCTCCATCACCGGCACCCGCCTCAGCCTCACGCGCGCCCTCAACTCCTCCGCCATCACCTTCGGCCTCTCCAACAACGACTGCATGGTCGACACCTTCAACGGCGTCACGGTCCTCTGGGAGCACGTGGTCACCCAGAGACAGAACCAGACCTTCTCCTGGCGGCCATTGCCGGAAGAGAAGCGAGGCTTCACATTGCGAATCAAGAAGAAGGACAAGTTCTTGATCCTCAACTCCTACTTGGACTTCATCATGGACAAGGCCAATGACATCCGCCGCAAGAATCAAGACAGGCTCTTGTACACGAACTCACGAGGTGGGTCGTTGGATTCTCGAGGCCATCCTTGGGAATCTGTGCCGTTCAAGCACCCGAGCACATTCGACACGTTGGCTATGGACCCAAAAGTGAAGCAGGAGATTATGGATGATTTGAAAGACTTCGCCAGTGGAGAGAGCTTTTACCAGAAAACTGGGCGGGCTTGGAAAAGAGGGTATCTTTTGTACGGCCCACCCGGTACTGGAAAATCAAGCATGATTGCTGCAATGGCCAATTTTCTGGGGTATGATATCTATGATCTAGAGCTCACTGAGGTTCACACCAACTCCGAGCTGAGGAAGTTGCTGATGAAGACTAGTTCCAAGTCGATTATTGTGATTGAGGATATAGATTGCTCCATCACTTTGACTAATAGGAAGAAGAACAATGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGCAGCTATGAGGACTTACTATGATTCGCCGGAAATGAGAGGCGTTTCAGGGGAGGAGGGTGGTGGGAATTCGATTACGCTTTCGGGGTTGTTGAATTTTACTGATGGGTTGTGGTCTTGTTGTGGGAGTGAGAGGATTTTCGTGTTTACGACGAATCATATTGAGAAGTTAGACCCTGCATTGCTGAGGAGTGGTAGGATGGATATGCATATATTCATGAGTCACTGTTCATTCCCTGCGTTGAAGATTCTGTTGAAGAATTACTTGGGATTTCAGGAGGGTGATTTGGATGAGGAGATTGCGAAAGAGTTTGAAGAGGTTTTGGACAAGGCTGGGATCACTCCGGCTGATGTGAGTGAGGCTTTGATCAAGAATAGGCGCGATAAGGATAAGGCGGTGAGGGAATTGTTGGAGGTGTTGAAGATGAAGGCAGAGAATAAGAACAAGAAGAGCAATGCAGGTTCAGCTGAGGAGGAAGAAGAGGAGCAGGAGAAGAGGGCATTGGAGAGTCCTAAAGTTGAAGGGTGTGACTTTGAGGAGGAGGACAACAGCTGCAAGAAAGGTGATGGAGATGATGATGAGGATCAGAAGCAAGATGATGAGAAAATAGAAAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006810 GO:0008104 GO:0008150 GO:0008320 GO:0008565 GO:0009987 GO:0015031 GO:0015833 GO:0016043 GO:0022607 GO:0022857 GO:0022884 GO:0033036 GO:0034622 GO:0042886 GO:0042887 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044424 GO:0044444 GO:0044464 GO:0045184 GO:0051131 GO:0051179 GO:0051234 GO:0055085 GO:0065003 GO:0071702 GO:0071705 GO:0071806 GO:0071840 GO:1904680

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA AAA_assoc

Protein Analysis

526

Amino Acids

59.22

Weight (kDa)

5.25

Isoelectric Point (pI)

48.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA_assoc	PF14363	26 - 118	1.2e-21	Domain associated at C-terminal with AAA
AAA	PF00004	240 - 394	2.3e-17	ATPase family associated with various cellular activities (AAA)
AAA_lid_At3g28540	PF25568	397 - 472	3e-12	At3g28540-like, AAA+ ATPase lid domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013397)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G25835 AT4G30250 AT4G30250 AT5G57480
fragaria_vesca	FvH4_4g08330
malus_domestica	MD13G1255400.v1.1
prunus_persica	Prupe.1G086500_v2.0.a1
pyrus_communis	pycom13g22720
rosa_chinensis	RchiOBHm_Chr4g0402591
rosa_laevigata	RLG00000009064
rosa_multiflora	Rmu_co8332339.1_g000001 Rmu_sc0004921.1_g000012
rosa_roxburghii	Rroxscaffold_5G00347310
rosa_rugosa	Rorug04G0036900
rosa_samantha	Rh4AG114500 Rh4BG106800 Rh4DG106700
rosa_wichuraiana	Rw4G009130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	311
Acc36I	ACCTGC	1 cut(s)	1412
AccB1I	GGYRCC	1 cut(s)	239
AccI	GTMKAC	1 cut(s)	315
AccII	CGCG	3 cut(s)	259, 261, 1344
AciI	CCGC	8 cut(s)	80, 244, 276, 388, 499, 502, 700, 1358
AclWI	GGATC	3 cut(s)	445, 1307, 1554
AcoI	YGGCCR	3 cut(s)	111, 389, 771
AcsI	RAATTY	2 cut(s)	1030, 1057
AcvI	CACGTG	1 cut(s)	352
AcyI	GRCGYC	1 cut(s)	330
AdeI	CACNNNGTG	1 cut(s)	542
AfaI	GTAC	4 cut(s)	11, 527, 728, 742
AfiI	CCNNNNNNNGG	4 cut(s)	384, 571, 743, 837
AflIII	ACRYGT	1 cut(s)	609
AgsI	TTSAA	9 cut(s)	325, 589, 658, 1057, 1207, 1219, 1277, 1384, 1484
AhlI	ACTAGT	1 cut(s)	857
AjnI	CCWGG	2 cut(s)	21, 383
AjuI	GAANNNNNNNTTGG	4 cut(s)	1211, 1243, 1448, 1480
AloI	GAACNNNNNNTCC	2 cut(s)	77, 109
AluBI	AGCT	9 cut(s)	88, 190, 208, 681, 808, 835, 968, 1430, 1515
AluI	AGCT	9 cut(s)	88, 190, 208, 681, 808, 835, 968, 1430, 1515
Alw21I	GWGCWC	5 cut(s)	90, 192, 351, 602, 810
Alw26I	GTCTC	2 cut(s)	232, 358
AlwI	GGATC	3 cut(s)	445, 1307, 1554
Ama87I	CYCGRG	2 cut(s)	558, 595
AoxI	GGCC	8 cut(s)	45, 111, 289, 389, 486, 562, 730, 771
ApeKI	GCWGC	3 cut(s)	764, 965, 1515
ApoI	RAATTY	2 cut(s)	1030, 1057
Asp700I	GAANNNNTTC	1 cut(s)	662
AspLEI	GCGC	4 cut(s)	221, 261, 263, 1344
AspS9I	GGNCC	4 cut(s)	15, 337, 622, 731
AsuC2I	CCSGG	1 cut(s)	738
AsuHPI	GGTGA	7 cut(s)	151, 226, 274, 349, 1256, 1372, 1538
AvaI	CYCGRG	2 cut(s)	558, 595
AvaII	GGWCC	3 cut(s)	15, 337, 622
BalI	TGGCCA	2 cut(s)	113, 773
BanI	GGYRCC	1 cut(s)	239
BanII	GRGCYC	3 cut(s)	90, 192, 810
BauI	CACGAG	1 cut(s)	537
BbrPI	CACGTG	1 cut(s)	352
BbsI	GAAGAC	1 cut(s)	860
Bbv12I	GWGCWC	5 cut(s)	90, 192, 351, 602, 810
BbvCI	CCTCAGC	4 cut(s)	248, 836, 1148, 1431
BbvI	GCAGC	3 cut(s)	751, 977, 1502
BccI	CCATC	7 cut(s)	239, 287, 573, 908, 1061, 1156, 1523
BceAI	ACGGC	5 cut(s)	185, 187, 343, 568, 745
BciT130I	CCWGG	2 cut(s)	23, 385
BclI	TGATCA	1 cut(s)	1329
BcnI	CCSGG	1 cut(s)	738
BcoDI	GTCTC	2 cut(s)	232, 358
BcuI	ACTAGT	1 cut(s)	857
BfaI	CTAG	3 cut(s)	35, 803, 858
BfoI	RGCGCY	1 cut(s)	222
BfuAI	ACCTGC	1 cut(s)	1412
BisI	GCNGC	5 cut(s)	389, 502, 765, 966, 1516
BlsI	GCNGC	5 cut(s)	390, 503, 766, 967, 1517
BmcAI	AGTACT	1 cut(s)	11
Bme1390I	CCNGG	3 cut(s)	23, 385, 738
Bme18I	GGWCC	3 cut(s)	15, 337, 622
BmeT110I	CYCGRG	2 cut(s)	558, 595
BmgT120I	GGNCC	4 cut(s)	15, 337, 622, 731
BmiI	GGNNCC	2 cut(s)	241, 624
BmrFI	CCNGG	3 cut(s)	23, 385, 738
BmrI	ACTGGG	1 cut(s)	705
BmsI	GCATC	1 cut(s)	35
BmuI	ACTGGG	1 cut(s)	705
BpiI	GAAGAC	1 cut(s)	860
Bpu10I	CCTNAGC	5 cut(s)	215, 248, 836, 1148, 1431
BpuMI	CCSGG	1 cut(s)	738
BsaAI	YACGTR	1 cut(s)	352
BsaBI	GATNNNNATC	1 cut(s)	1545
BsaHI	GRCGYC	1 cut(s)	330
BsaJI	CCNNGG	2 cut(s)	21, 569
BsaWI	WCCGGW	1 cut(s)	90
BsaXI	ACNNNNNCTCC	7 cut(s)	32, 77, 107, 119, 149, 812, 842
Bsc4I	CCNNNNNNNGG	4 cut(s)	384, 571, 743, 837
Bse118I	RCCGGY	1 cut(s)	236
Bse1I	ACTGG	6 cut(s)	17, 114, 134, 669, 700, 748
Bse3DI	GCAATG	5 cut(s)	392, 419, 774, 1142, 1423
Bse8I	GATNNNNATC	1 cut(s)	1545
BseBI	CCWGG	2 cut(s)	23, 385
BseDI	CCNNGG	2 cut(s)	21, 569
BseGI	GGATG	6 cut(s)	26, 495, 565, 655, 1167, 1258
BseJI	GATNNNNATC	1 cut(s)	1545
BseLI	CCNNNNNNNGG	4 cut(s)	384, 571, 743, 837
BseMI	GCAATG	5 cut(s)	392, 419, 774, 1142, 1423
BseMII	CTCAG	6 cut(s)	206, 262, 804, 827, 1139, 1422
BseNI	ACTGG	6 cut(s)	17, 114, 134, 669, 700, 748
BsePI	GCGCGC	1 cut(s)	259
BseXI	GCAGC	3 cut(s)	751, 977, 1502
BseYI	CCCAGC	1 cut(s)	1295
BsgI	GTGCAG	1 cut(s)	984
Bsh1236I	CGCG	3 cut(s)	259, 261, 1344
BshFI	GGCC	8 cut(s)	47, 113, 291, 391, 488, 564, 732, 773
BshNI	GGYRCC	1 cut(s)	239
BsiHKAI	GWGCWC	5 cut(s)	90, 192, 351, 602, 810
BsiHKCI	CYCGRG	2 cut(s)	558, 595
BsiSI	CCGG	7 cut(s)	83, 91, 237, 398, 738, 992, 1307
BslI	CCNNNNNNNGG	4 cut(s)	384, 571, 743, 837
BsmAI	GTCTC	2 cut(s)	232, 358
BsmBI	CGTCTC	1 cut(s)	232
BsnI	GGCC	8 cut(s)	47, 113, 291, 391, 488, 564, 732, 773
BsoBI	CYCGRG	2 cut(s)	558, 595
Bsp1286I	GDGCHC	5 cut(s)	90, 192, 351, 602, 810
Bsp1407I	TGTACA	1 cut(s)	525
Bsp143I	GATC	6 cut(s)	165, 450, 799, 1299, 1329, 1546
BspACI	CCGC	8 cut(s)	80, 244, 276, 388, 499, 502, 700, 1358
BspANI	GGCC	8 cut(s)	47, 113, 291, 391, 488, 564, 732, 773
BspCNI	CTCAG	6 cut(s)	207, 261, 805, 828, 1140, 1423
BspFNI	CGCG	3 cut(s)	259, 261, 1344
BspHI	TCATGA	1 cut(s)	1179
BspLI	GGNNCC	2 cut(s)	241, 624
BspMI	ACCTGC	1 cut(s)	1412
BspPI	GGATC	3 cut(s)	445, 1307, 1554
BspQI	GCTCTTC	1 cut(s)	1406
BspT107I	GGYRCC	1 cut(s)	239
BsrDI	GCAATG	5 cut(s)	392, 419, 774, 1142, 1423
BsrFI	RCCGGY	1 cut(s)	236
BsrGI	TGTACA	1 cut(s)	525
BsrI	ACTGG	6 cut(s)	17, 114, 134, 669, 700, 748
BssAI	RCCGGY	1 cut(s)	236
BssECI	CCNNGG	2 cut(s)	21, 569
BssHII	GCGCGC	1 cut(s)	259
BssMI	GATC	6 cut(s)	165, 450, 799, 1299, 1329, 1546
BssNI	GRCGYC	1 cut(s)	330
BssSI	CACGAG	1 cut(s)	537
BssT1I	CCWWGG	1 cut(s)	569
Bst2BI	CACGAG	1 cut(s)	537
Bst2UI	CCWGG	2 cut(s)	23, 385
Bst4CI	ACNGT	4 cut(s)	73, 226, 337, 1190
Bst6I	CTCTTC	5 cut(s)	396, 1272, 1406, 1437, 1451
BstACI	GRCGYC	1 cut(s)	330
BstAUI	TGTACA	1 cut(s)	525
BstBAI	YACGTR	1 cut(s)	352
BstC8I	GCNNGC	3 cut(s)	115, 261, 702
BstDEI	CTNAG	6 cut(s)	215, 248, 813, 836, 1148, 1431
BstEII	GGTNACC	1 cut(s)	355
BstF5I	GGATG	6 cut(s)	26, 495, 565, 655, 1167, 1258
BstFNI	CGCG	3 cut(s)	259, 261, 1344
BstH2I	RGCGCY	1 cut(s)	222
BstHHI	GCGC	4 cut(s)	221, 261, 263, 1344
BstKTI	GATC	6 cut(s)	168, 453, 802, 1302, 1332, 1549
BstMAI	GTCTC	2 cut(s)	232, 358
BstMBI	GATC	6 cut(s)	165, 450, 799, 1299, 1329, 1546
BstMWI	GCNNNNNNNGC	5 cut(s)	258, 394, 589, 770, 1427
BstNI	CCWGG	2 cut(s)	23, 385
BstPI	GGTNACC	1 cut(s)	355
BstSCI	CCNGG	3 cut(s)	21, 383, 736
BstUI	CGCG	3 cut(s)	259, 261, 1344
BstV1I	GCAGC	3 cut(s)	751, 977, 1502
BstV2I	GAAGAC	1 cut(s)	860
BstXI	CCANNNNNNTGG	2 cut(s)	695, 781
BsuRI	GGCC	8 cut(s)	47, 113, 291, 391, 488, 564, 732, 773
BtsCI	GGATG	6 cut(s)	26, 495, 565, 655, 1167, 1258
BtsIMutI	CAGTG	4 cut(s)	127, 676, 810, 1186
BveI	ACCTGC	1 cut(s)	1412
Cac8I	GCNNGC	3 cut(s)	115, 261, 702
CciI	TCATGA	1 cut(s)	1179
CfoI	GCGC	4 cut(s)	221, 261, 263, 1344
Cfr10I	RCCGGY	1 cut(s)	236
Cfr13I	GGNCC	4 cut(s)	15, 337, 622, 731
CseI	GACGC	1 cut(s)	319
Csp6I	GTAC	4 cut(s)	10, 526, 727, 741
CspCI	CAANNNNNGTGG	2 cut(s)	916, 951
CviAII	CATG	4 cut(s)	310, 478, 757, 1180
CviQI	GTAC	4 cut(s)	10, 526, 727, 741
DdeI	CTNAG	6 cut(s)	215, 248, 813, 836, 1148, 1431
DpnI	GATC	6 cut(s)	167, 452, 801, 1301, 1331, 1548
DpnII	GATC	6 cut(s)	165, 450, 799, 1299, 1329, 1546
DraIII	CACNNNGTG	1 cut(s)	542
DrdI	GACNNNNNNGTC	1 cut(s)	311
DseDI	GACNNNNNNGTC	1 cut(s)	311
EaeI	YGGCCR	3 cut(s)	111, 389, 771
Eam1104I	CTCTTC	5 cut(s)	396, 1272, 1406, 1437, 1451
EarI	CTCTTC	5 cut(s)	396, 1272, 1406, 1437, 1451
EciI	GGCGGA	2 cut(s)	265, 488
Ecl136II	GAGCTC	3 cut(s)	88, 190, 808
Eco130I	CCWWGG	1 cut(s)	569
Eco24I	GRGCYC	3 cut(s)	90, 192, 810
Eco32I	GATATC	1 cut(s)	793
Eco47I	GGWCC	3 cut(s)	15, 337, 622
Eco53kI	GAGCTC	3 cut(s)	88, 190, 808
Eco72I	CACGTG	1 cut(s)	352
Eco88I	CYCGRG	2 cut(s)	558, 595
Eco91I	GGTNACC	1 cut(s)	355
EcoICRI	GAGCTC	3 cut(s)	88, 190, 808
EcoO65I	GGTNACC	1 cut(s)	355
EcoRI	GAATTC	1 cut(s)	1030
EcoRII	CCWGG	2 cut(s)	21, 383
EcoRV	GATATC	1 cut(s)	793
EcoT14I	CCWWGG	1 cut(s)	569
EcoT22I	ATGCAT	1 cut(s)	1173
EcoT38I	GRGCYC	3 cut(s)	90, 192, 810
ErhI	CCWWGG	1 cut(s)	569
Esp3I	CGTCTC	1 cut(s)	232
FaeI	CATG	4 cut(s)	313, 481, 760, 1183
FalI	AAGNNNNNCTT	4 cut(s)	398, 430, 1211, 1243
FatI	CATG	4 cut(s)	309, 477, 756, 1179
FauI	CCCGC	3 cut(s)	87, 251, 693
FbaI	TGATCA	1 cut(s)	1329
FblI	GTMKAC	1 cut(s)	315
Fnu4HI	GCNGC	5 cut(s)	389, 502, 765, 966, 1516
FokI	GGATG	6 cut(s)	13, 482, 552, 662, 1174, 1265
FriOI	GRGCYC	3 cut(s)	90, 192, 810
Fsp4HI	GCNGC	5 cut(s)	389, 502, 765, 966, 1516
FspBI	CTAG	3 cut(s)	35, 803, 858
GlaI	GCGC	4 cut(s)	220, 260, 262, 1343
GluI	GCNGC	5 cut(s)	389, 502, 765, 966, 1516
GsaI	CCCAGC	1 cut(s)	1299
HaeII	RGCGCY	1 cut(s)	222
HaeIII	GGCC	8 cut(s)	47, 113, 291, 391, 488, 564, 732, 773
HapII	CCGG	7 cut(s)	83, 91, 237, 398, 738, 992, 1307
HgaI	GACGC	1 cut(s)	319
HhaI	GCGC	4 cut(s)	221, 261, 263, 1344
Hin1I	GRCGYC	1 cut(s)	330
Hin1II	CATG	4 cut(s)	313, 481, 760, 1183
Hin6I	GCGC	4 cut(s)	219, 259, 261, 1342
HinP1I	GCGC	4 cut(s)	219, 259, 261, 1342
HincII	GTYRAC	1 cut(s)	316
HindII	GTYRAC	1 cut(s)	316
HinfI	GANTC	9 cut(s)	426, 508, 554, 575, 986, 1117, 1183, 1210, 1471
HpaII	CCGG	7 cut(s)	83, 91, 237, 398, 738, 992, 1307
HphI	GGTGA	7 cut(s)	151, 226, 274, 349, 1256, 1372, 1538
Hpy166II	GTNNAC	5 cut(s)	178, 316, 528, 820, 1110
Hpy188I	TCNGA	3 cut(s)	105, 832, 1551
Hpy188III	TCNNGA	9 cut(s)	430, 448, 512, 537, 558, 803, 1180, 1238, 1333
Hpy8I	GTNNAC	5 cut(s)	178, 316, 528, 820, 1110
Hpy99I	CGWCG	2 cut(s)	173, 1117
HpyAV	CCTTC	8 cut(s)	41, 58, 295, 331, 388, 430, 1384, 1478
HpyCH4III	ACNGT	4 cut(s)	73, 226, 337, 1190
HpyCH4IV	ACGT	2 cut(s)	351, 611
HpyCH4V	TGCA	7 cut(s)	309, 767, 965, 1142, 1171, 1421, 1518
HpyF10VI	GCNNNNNNNGC	5 cut(s)	258, 394, 589, 770, 1427
HpyF3I	CTNAG	6 cut(s)	215, 248, 813, 836, 1148, 1431
HpySE526I	ACGT	2 cut(s)	351, 611
Hsp92I	GRCGYC	1 cut(s)	330
Hsp92II	CATG	4 cut(s)	313, 481, 760, 1183
HspAI	GCGC	4 cut(s)	219, 259, 261, 1342
Ksp22I	TGATCA	1 cut(s)	1329
Kzo9I	GATC	6 cut(s)	165, 450, 799, 1299, 1329, 1546
LguI	GCTCTTC	1 cut(s)	1406
LmnI	GCTCC	5 cut(s)	85, 93, 346, 902, 1447
Lsp1109I	GCAGC	3 cut(s)	751, 977, 1502
LweI	GCATC	1 cut(s)	35
MaeI	CTAG	3 cut(s)	35, 803, 858
MaeII	ACGT	2 cut(s)	351, 611
MaeIII	GTNAC	4 cut(s)	331, 355, 1184, 1490
MalI	GATC	6 cut(s)	167, 452, 801, 1301, 1331, 1548
MboI	GATC	6 cut(s)	165, 450, 799, 1299, 1329, 1546
MhlI	GDGCHC	5 cut(s)	90, 192, 351, 602, 810
MlsI	TGGCCA	2 cut(s)	113, 773
MluCI	AATT	5 cut(s)	775, 1030, 1057, 1222, 1367
MluNI	TGGCCA	2 cut(s)	113, 773
MlyI	GAGTC	2 cut(s)	1192, 1480
MmeI	TCCRAC	3 cut(s)	321, 531, 1353
Mox20I	TGGCCA	2 cut(s)	113, 773
Mph1103I	ATGCAT	1 cut(s)	1173
MroXI	GAANNNNTTC	1 cut(s)	662
MscI	TGGCCA	2 cut(s)	113, 773
Msp20I	TGGCCA	2 cut(s)	113, 773
MspA1I	CMGCKG	2 cut(s)	1430, 1515
MspI	CCGG	7 cut(s)	83, 91, 237, 398, 738, 992, 1307
MspR9I	CCNGG	3 cut(s)	23, 385, 738
MvaI	CCWGG	2 cut(s)	23, 385
MvnI	CGCG	3 cut(s)	259, 261, 1344
MwoI	GCNNNNNNNGC	5 cut(s)	258, 394, 589, 770, 1427
NciI	CCSGG	1 cut(s)	738
NdeII	GATC	6 cut(s)	165, 450, 799, 1299, 1329, 1546
NlaIII	CATG	4 cut(s)	313, 481, 760, 1183
NlaIV	GGNNCC	2 cut(s)	241, 624
NmuCI	GTSAC	4 cut(s)	331, 355, 1184, 1490
NsiI	ATGCAT	1 cut(s)	1173
PaeR7I	CTCGAG	1 cut(s)	558
PagI	TCATGA	1 cut(s)	1179
PauI	GCGCGC	1 cut(s)	259
PciSI	GCTCTTC	1 cut(s)	1406
PcsI	WCGNNNNNNNCGW	1 cut(s)	159
PdmI	GAANNNNTTC	1 cut(s)	662
PfeI	GAWTC	7 cut(s)	426, 508, 554, 575, 986, 1117, 1210
PkrI	GCNGC	5 cut(s)	390, 503, 766, 967, 1517
PleI	GAGTC	2 cut(s)	1191, 1479
PmaCI	CACGTG	1 cut(s)	352
PmlI	CACGTG	1 cut(s)	352
PpsI	GAGTC	2 cut(s)	1191, 1479
Ppu21I	YACGTR	1 cut(s)	352
Psp124BI	GAGCTC	3 cut(s)	90, 192, 810
Psp6I	CCWGG	2 cut(s)	21, 383
PspCI	CACGTG	1 cut(s)	352
PspEI	GGTNACC	1 cut(s)	355
PspFI	CCCAGC	1 cut(s)	1295
PspGI	CCWGG	2 cut(s)	21, 383
PspN4I	GGNNCC	2 cut(s)	241, 624
PspPI	GGNCC	4 cut(s)	15, 337, 622, 731
PteI	GCGCGC	1 cut(s)	259
PvuII	CAGCTG	2 cut(s)	1430, 1515
RsaI	GTAC	4 cut(s)	11, 527, 728, 742
RsaNI	GTAC	4 cut(s)	10, 526, 727, 741
SacI	GAGCTC	3 cut(s)	90, 192, 810
SalI	GTCGAC	1 cut(s)	314
SapI	GCTCTTC	1 cut(s)	1406
SatI	GCNGC	5 cut(s)	389, 502, 765, 966, 1516
Sau3AI	GATC	6 cut(s)	165, 450, 799, 1299, 1329, 1546
Sau96I	GGNCC	4 cut(s)	15, 337, 622, 731
ScaI	AGTACT	1 cut(s)	11
SchI	GAGTC	2 cut(s)	1192, 1480
ScrFI	CCNGG	3 cut(s)	23, 385, 738
SduI	GDGCHC	5 cut(s)	90, 192, 351, 602, 810
SfaNI	GCATC	1 cut(s)	35
Sfr274I	CTCGAG	1 cut(s)	558
SinI	GGWCC	3 cut(s)	15, 337, 622
SlaI	CTCGAG	1 cut(s)	558
SmlI	CTYRAG	1 cut(s)	558
SmoI	CTYRAG	1 cut(s)	558
SpeI	ACTAGT	1 cut(s)	857
Sse9I	AATT	5 cut(s)	775, 1030, 1057, 1222, 1367
SsiI	CCGC	8 cut(s)	80, 244, 276, 388, 499, 502, 700, 1358
SspMI	CTAG	3 cut(s)	35, 803, 858
SstI	GAGCTC	3 cut(s)	90, 192, 810
StyD4I	CCNGG	3 cut(s)	21, 383, 736
StyI	CCWWGG	1 cut(s)	569
TaaI	ACNGT	4 cut(s)	73, 226, 337, 1190
TaiI	ACGT	2 cut(s)	354, 614
TaqI	TCGA	7 cut(s)	153, 168, 315, 559, 606, 869, 1034
TasI	AATT	5 cut(s)	775, 1030, 1057, 1222, 1367
TatI	WGTACW	2 cut(s)	9, 525
TauI	GCSGC	2 cut(s)	391, 504
TfiI	GAWTC	7 cut(s)	426, 508, 554, 575, 986, 1117, 1210
TscAI	CASTG	4 cut(s)	134, 676, 817, 1193
TseFI	GTSAC	4 cut(s)	331, 355, 1184, 1490
TseI	GCWGC	3 cut(s)	764, 965, 1515
Tsp45I	GTSAC	4 cut(s)	331, 355, 1184, 1490
TspDTI	ATGAA	6 cut(s)	17, 463, 866, 1168, 1182, 1403
TspRI	CASTG	4 cut(s)	134, 676, 817, 1193
VpaK11BI	GGWCC	3 cut(s)	15, 337, 622
XapI	RAATTY	2 cut(s)	1030, 1057
XbaI	TCTAGA	1 cut(s)	802
XhoI	CTCGAG	1 cut(s)	558
XmiI	GTMKAC	1 cut(s)	315
XmnI	GAANNNNTTC	1 cut(s)	662
XspI	CTAG	3 cut(s)	35, 803, 858
ZrmI	AGTACT	1 cut(s)	11
Zsp2I	ATGCAT	1 cut(s)	1173

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.