Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0008944

Physical Location & Seq

Genomic Coordinates Forward (+)

11870217 .. 11876381

Gene Structure 6165 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g09800.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2184 bp

ATGGAATTGAAGAAGGAGAGGCTTGTCAGGTTTTATTCTGATAAAAAACACCATAGAGATTCTATATGGGACAGAACTGAACCGTATCGACTTGAAAAGTCAGCCTCTCAATATAAGGTTGCATCATCTTCATTGCTCAAATCTGATAATGGACTAGTGGGGGGCAGAAGCAGATTTGCTGAAACTTTCAGAATCGGGCATTCAAAGGTGTTTCCAGAGGACCATGAGCCATGGCGCAAGAGAATACTTGACCCAGGTAGTGAGATAGTGCTGCAATGGAATCGAGTTTTCATTGTCTCATGTTTGGTTGCACTTTTTGTGGACCCATTGTACTTTTACTTGCCCATGGCTGGAGGGAGTGGAAACAGTTTTTGCATGAAGACAGACTTGAATCTGCGGATTGTTGTGACTTTTTTCCGGACTATCGCGGATTTCTTCTATTTGTTGCACATGATTATAAAGTTTAGGACAGCTTATGTTGCACCAAGCTCTCGCGTTTTCGGGAGGGGTGAACTTGTCATGGACCCAAAGAAGATTGCACAGAAGTACGTTACATCAGACTTCTCCATTGATCTCATAGCCACATTGCCGCTTCCTCAGATAGTCATATGGTTTGTCATACCTCCCCAAAATGCTCAAACGGATGACACCAACAATGCACTTGCGCTAATTGTTCTCCTCCAGTACATTCCCAGATTATATCTGATTTTCCCTTTAAGTTTGCAATTAATCAAAGCAACTGGGGTGGTGACAAAAACTGCTTGGGCAGGGGCTGCATATAATCTGCTATTATACATGCTGGCCAGCCATGTTTTAGGGGCAGCATGGTATTTGCTATCTATTGACCGGTATGCATCATGCTGGAAGAAATTTTGTAGAAAGGACCTCAGCCCCATAAAATGCTTGCCTAAATATTTAGATTGTAATACTGTTAACCAATTTGATCGTGAGACATGGGCAAATCGTACAAATGTTTTTGATAGCTGCAATCCTGAAAGCAACATATTCAAATATGGAATATTTGAGAGTGCGCTGACTAAAAATGCTGTTTCCTCCAACTTCATCACAAAGTACTTCTATTGCTTATGGTGGGGTTTACAGCAACTAAGTTCATATGGGCAAAATTTGACAACGAGCACTTTTATTGGAGAGACATCATTCGCCATTCTCATTGCCATCGTAGGTCTTGTATTATTTGCCCACTTAATTGGGAATATGCAGACCTATCTCCAATCAATCACCGTGAGGCTTGAGGAGTGGAGGCTTAAGAGAAGAGACACTGAGGAATGGATGGGACATCGTCAACTCCCTGAAGTTTTGAGACAACGTGTACGGAGGTTTGTCCAATACAAGTGGCTGGCGACTCGAGGAGTTGATGAAGAAGCCATCCTTCATGGCTTACCTGCTGATCTTCGCCGTGATATTCAACGCCACCTATGCTTAGATCTTGTTCGACGAGTACCTTTCTTCTCACAGATGGATGATCAGCTTCTTGATGCAATATGTGAGCGTCTTGTATCCTCCCTAAGCACAGCAGGCACTTACATTGTCAGAGAGGGTGACCCAGTCACAGAAATGCTTTTCATTATTAGAGGTACTCTCGATAGTTCTACTACCAATGGAGGCCGGACAGGTTTCTTCAATTCAATAACATTAAGACCTGGGGACTTCTGCGGTGAGGAGCTACTTGCATGGGCACTGCTCCCAAAATCCACAGTCAACATGCCGTCTTCTACAAGAACAGTAATAGCACTTTCTGAAGTTGAAGCTTTTGCATTGCGAGCTGAAGATCTGAAATTTGTGGCCAACCAATTTAGACGCCTGCACAGCAAGAAGCTGCAGCACACATTTCGGTTTTACTCCCACCATTGGAGAACATGGGCAGCCTGCTTCATACAGGCTGCTTGGCGTAGCCACAAGAGAAGGATGATGGCAAAAGATCTCAGCTTGAGGGAATCCTTTGCTTTGGATGAGAAAGCAGCCTATGAGACTGCACAAGAGGAAGAAGAAGAATTTGAACCGACAAGTTCCAATTCTTCACAAGTAAAAATGAATCTTGGGGTTACACTACTGGCCTCAAGATTTGCTGCAAACACAAAGAGGGGTGCTCAGAAGATCAAAGACGAGATGCCGAGGTTACCAAAACCTGCAGAACCCGACTTCTTCACTGAGCCTGAATATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005216 GO:0005244 GO:0005249 GO:0005261 GO:0005267 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0008150 GO:0008324 GO:0009987 GO:0015075 GO:0015077 GO:0015079 GO:0015267 GO:0015318 GO:0015672 GO:0016020 GO:0016021 GO:0022803 GO:0022832 GO:0022836 GO:0022838 GO:0022839 GO:0022843 GO:0022857 GO:0022890 GO:0030001 GO:0031224 GO:0031226 GO:0034220 GO:0042391 GO:0044425 GO:0044459 GO:0044464 GO:0046873 GO:0051179 GO:0051234 GO:0055085 GO:0065007 GO:0065008 GO:0071804 GO:0071805 GO:0071944 GO:0098655 GO:0098660 GO:0098662

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

Ion_trans cNMP_binding

Protein Analysis

728

Amino Acids

83.77

Weight (kDa)

9.16

Isoelectric Point (pI)

44.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ion_trans	PF00520	93 - 416	6.3e-20	Ion transport protein
cNMP_binding	PF00027	512 - 601	9.7e-09	Cyclic nucleotide-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008944)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G30360
fragaria_vesca	FvH4_4g09800
malus_domestica	MD13G1261400.v1.1 MD16G1264100.v1.1
prunus_persica	Prupe.1G095400_v2.0.a1 Prupe.1G095400_v2.0.a1 Prupe.1G095400_v2.0.a1 Prupe.1G095400_v2.0.a1 Prupe.1G095400_v2.0.a1
pyrus_communis	pycom13g24930 pycom16g23260
rosa_chinensis	RchiOBHm_Chr4g0404621
rosa_laevigata	RLG00000008918
rosa_multiflora	Rmu_sc0002699.1_g000026
rosa_roxburghii	Rroxscaffold_5G00348770
rosa_rugosa	Rorug04G0048000
rosa_samantha	Rh4AG124000 Rh4BG117700 Rh4BG117800 Rh4CG132100 Rh4DG116900
rosa_wichuraiana	Rw4G010050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	458
Acc36I	ACCTGC	2 cut(s)	1411, 2155
AccII	CGCG	2 cut(s)	428, 495
AccIII	TCCGGA	1 cut(s)	417
AciI	CCGC	4 cut(s)	397, 428, 590, 1674
AcoI	YGGCCR	2 cut(s)	801, 1803
AcsI	RAATTY	4 cut(s)	869, 1123, 1796, 2012
AcuI	CTGAAG	3 cut(s)	1332, 1779, 1806
AcyI	GRCGYC	1 cut(s)	1819
AfaI	GTAC	8 cut(s)	332, 548, 686, 967, 1073, 1332, 1461, 1597
AfiI	CCNNNNNNNGG	2 cut(s)	350, 1869
AflII	CTTAAG	1 cut(s)	1265
AflIII	ACRYGT	1 cut(s)	1327
AgeI	ACCGGT	1 cut(s)	846
AhlI	ACTAGT	1 cut(s)	154
AjnI	CCWGG	2 cut(s)	253, 1660
AluBI	AGCT	9 cut(s)	473, 489, 984, 1489, 1684, 1769, 1784, 1837, 1947
AluI	AGCT	9 cut(s)	473, 489, 984, 1489, 1684, 1769, 1784, 1837, 1947
Alw21I	GWGCWC	2 cut(s)	1139, 2110
Alw26I	GTCTC	6 cut(s)	301, 944, 1145, 1269, 1315, 1982
AlwNI	CAGNNNCTG	1 cut(s)	773
Ama87I	CYCGRG	1 cut(s)	1365
Aor13HI	TCCGGA	1 cut(s)	417
AoxI	GGCC	4 cut(s)	801, 1624, 1803, 2073
ApoI	RAATTY	4 cut(s)	869, 1123, 1796, 2012
AseI	ATTAAT	1 cut(s)	728
AsiGI	ACCGGT	1 cut(s)	846
AspLEI	GCGC	3 cut(s)	237, 667, 1033
AspS9I	GGNCC	4 cut(s)	220, 322, 523, 883
AsuHPI	GGTGA	5 cut(s)	521, 760, 1231, 1571, 1688
AvaI	CYCGRG	1 cut(s)	1365
AvaII	GGWCC	4 cut(s)	220, 322, 523, 883
BaeGI	GKGCMC	1 cut(s)	1699
BalI	TGGCCA	2 cut(s)	803, 1805
BbsI	GAAGAC	2 cut(s)	386, 1722
Bbv12I	GWGCWC	2 cut(s)	1139, 2110
BbvCI	CCTCAGC	1 cut(s)	887
BccI	CCATC	5 cut(s)	1184, 1285, 1394, 1471, 1924
BceAI	ACGGC	2 cut(s)	1401, 1711
BcgI	CGANNNNNNTGC	4 cut(s)	263, 297, 1832, 1866
BciT130I	CCWGG	2 cut(s)	255, 1662
BciVI	GTATCC	1 cut(s)	1528
BclI	TGATCA	1 cut(s)	1483
BcoDI	GTCTC	6 cut(s)	301, 944, 1145, 1269, 1315, 1982
BcuI	ACTAGT	1 cut(s)	154
BfaI	CTAG	1 cut(s)	155
BfmI	CTRYAG	2 cut(s)	1838, 2148
BfrI	CTTAAG	1 cut(s)	1265
BfuAI	ACCTGC	2 cut(s)	1411, 2155
BfuI	GTATCC	1 cut(s)	1528
BglII	AGATCT	3 cut(s)	1444, 1789, 1939
BmcAI	AGTACT	1 cut(s)	1073
Bme1390I	CCNGG	2 cut(s)	255, 1662
Bme18I	GGWCC	4 cut(s)	220, 322, 523, 883
BmeT110I	CYCGRG	1 cut(s)	1365
BmgT120I	GGNCC	4 cut(s)	220, 322, 523, 883
BmiI	GGNNCC	2 cut(s)	324, 525
BmrFI	CCNGG	2 cut(s)	255, 1662
BmrI	ACTGGG	2 cut(s)	750, 1559
BmsI	GCATC	4 cut(s)	131, 863, 1486, 2118
BmuI	ACTGGG	2 cut(s)	750, 1559
BpiI	GAAGAC	2 cut(s)	386, 1722
BplI	GAGNNNNNCTC	4 cut(s)	1584, 1616, 2092, 2124
BpmI	CTGGAG	2 cut(s)	372, 665
Bpu10I	CCTNAGC	2 cut(s)	887, 1526
BpuEI	CTTGAG	3 cut(s)	1271, 1969, 2062
BsaHI	GRCGYC	1 cut(s)	1819
BsaJI	CCNNGG	5 cut(s)	230, 253, 345, 1661, 2132
BsaWI	WCCGGW	2 cut(s)	417, 846
Bsc4I	CCNNNNNNNGG	2 cut(s)	350, 1869
Bse118I	RCCGGY	1 cut(s)	846
Bse1I	ACTGG	4 cut(s)	682, 745, 1565, 2076
Bse3DI	GCAATG	5 cut(s)	131, 281, 584, 1170, 1775
BseAI	TCCGGA	1 cut(s)	417
BseBI	CCWGG	2 cut(s)	255, 1662
BseDI	CCNNGG	5 cut(s)	230, 253, 345, 1661, 2132
BseGI	GGATG	6 cut(s)	649, 1296, 1386, 1486, 1932, 1975
BseLI	CCNNNNNNNGG	2 cut(s)	350, 1869
BseMI	GCAATG	5 cut(s)	131, 281, 584, 1170, 1775
BseMII	CTCAG	6 cut(s)	611, 901, 1272, 1957, 2123, 2160
BseNI	ACTGG	4 cut(s)	682, 745, 1565, 2076
BseRI	GAGGAG	4 cut(s)	668, 1268, 1383, 1694
BseSI	GKGCMC	1 cut(s)	1699
BsgI	GTGCAG	2 cut(s)	1808, 1977
Bsh1236I	CGCG	2 cut(s)	428, 495
BshFI	GGCC	4 cut(s)	803, 1626, 1805, 2075
BshTI	ACCGGT	1 cut(s)	846
BsiHKAI	GWGCWC	2 cut(s)	1139, 2110
BsiHKCI	CYCGRG	1 cut(s)	1365
BsiSI	CCGG	3 cut(s)	418, 847, 1627
BslFI	GGGAC	3 cut(s)	83, 1308, 1679
BslI	CCNNNNNNNGG	2 cut(s)	350, 1869
BsmAI	GTCTC	6 cut(s)	301, 944, 1145, 1269, 1315, 1982
BsmFI	GGGAC	3 cut(s)	83, 1308, 1679
BsmI	GAATGC	1 cut(s)	199
BsnI	GGCC	4 cut(s)	803, 1626, 1805, 2075
BsoBI	CYCGRG	1 cut(s)	1365
Bsp1286I	GDGCHC	3 cut(s)	1139, 1699, 2110
Bsp13I	TCCGGA	1 cut(s)	417
Bsp143I	GATC	8 cut(s)	571, 943, 1408, 1444, 1483, 1789, 1939, 2115
Bsp19I	CCATGG	2 cut(s)	230, 345
BspACI	CCGC	4 cut(s)	397, 428, 590, 1674
BspANI	GGCC	4 cut(s)	803, 1626, 1805, 2075
BspCNI	CTCAG	6 cut(s)	610, 900, 1273, 1956, 2122, 2161
BspEI	TCCGGA	1 cut(s)	417
BspFNI	CGCG	2 cut(s)	428, 495
BspLI	GGNNCC	2 cut(s)	324, 525
BspMAI	CTGCAG	2 cut(s)	1842, 2152
BspMI	ACCTGC	2 cut(s)	1411, 2155
BspTI	CTTAAG	1 cut(s)	1265
BsrDI	GCAATG	5 cut(s)	131, 281, 584, 1170, 1775
BsrFI	RCCGGY	1 cut(s)	846
BsrI	ACTGG	4 cut(s)	682, 745, 1565, 2076
BssAI	RCCGGY	1 cut(s)	846
BssECI	CCNNGG	5 cut(s)	230, 253, 345, 1661, 2132
BssMI	GATC	8 cut(s)	571, 943, 1408, 1444, 1483, 1789, 1939, 2115
BssNI	GRCGYC	1 cut(s)	1819
BssT1I	CCWWGG	2 cut(s)	230, 345
Bst2UI	CCWGG	2 cut(s)	255, 1662
Bst4CI	ACNGT	6 cut(s)	84, 368, 931, 1243, 1717, 1744
Bst6I	CTCTTC	1 cut(s)	1267
BstACI	GRCGYC	1 cut(s)	1819
BstAFI	CTTAAG	1 cut(s)	1265
BstAPI	GCANNNNNTGC	1 cut(s)	773
BstC8I	GCNNGC	8 cut(s)	801, 805, 905, 1359, 1537, 1782, 1823, 1888
BstDEI	CTNAG	9 cut(s)	597, 887, 1106, 1281, 1441, 1526, 1943, 2109, 2169
BstDSI	CCRYGG	2 cut(s)	230, 345
BstEII	GGTNACC	2 cut(s)	1559, 2136
BstF5I	GGATG	6 cut(s)	649, 1296, 1386, 1486, 1932, 1975
BstFNI	CGCG	2 cut(s)	428, 495
BstHHI	GCGC	3 cut(s)	237, 667, 1033
BstKTI	GATC	8 cut(s)	574, 946, 1411, 1447, 1486, 1792, 1942, 2118
BstMAI	GTCTC	6 cut(s)	301, 944, 1145, 1269, 1315, 1982
BstMBI	GATC	8 cut(s)	571, 943, 1408, 1444, 1483, 1789, 1939, 2115
BstMWI	GCNNNNNNNGC	6 cut(s)	479, 773, 1437, 1536, 1781, 1827
BstNI	CCWGG	2 cut(s)	255, 1662
BstNSI	RCATGY	2 cut(s)	799, 1726
BstPI	GGTNACC	2 cut(s)	1559, 2136
BstSCI	CCNGG	2 cut(s)	253, 1660
BstSFI	CTRYAG	2 cut(s)	1838, 2148
BstSLI	GKGCMC	1 cut(s)	1699
BstUI	CGCG	2 cut(s)	428, 495
BstV2I	GAAGAC	2 cut(s)	386, 1722
BstX2I	RGATCY	3 cut(s)	1444, 1789, 1939
BstXI	CCANNNNNNTGG	1 cut(s)	1208
BstYI	RGATCY	3 cut(s)	1444, 1789, 1939
BsuI	GTATCC	1 cut(s)	1528
BsuRI	GGCC	4 cut(s)	803, 1626, 1805, 2075
BtgI	CCRYGG	2 cut(s)	230, 345
BtsCI	GGATG	6 cut(s)	649, 1296, 1386, 1486, 1932, 1975
BtsI	GCAGTG	1 cut(s)	1697
BtsIMutI	CAGTG	3 cut(s)	1278, 1697, 2166
BveI	ACCTGC	2 cut(s)	1411, 2155
Cac8I	GCNNGC	8 cut(s)	801, 805, 905, 1359, 1537, 1782, 1823, 1888
CaiI	CAGNNNCTG	1 cut(s)	773
CfoI	GCGC	3 cut(s)	237, 667, 1033
Cfr10I	RCCGGY	1 cut(s)	846
Cfr13I	GGNCC	4 cut(s)	220, 322, 523, 883
CseI	GACGC	2 cut(s)	1499, 1827
Csp6I	GTAC	8 cut(s)	331, 547, 685, 966, 1072, 1331, 1460, 1596
CspAI	ACCGGT	1 cut(s)	846
CspCI	CAANNNNNGTGG	4 cut(s)	726, 761, 1334, 1369
CviQI	GTAC	8 cut(s)	331, 547, 685, 966, 1072, 1331, 1460, 1596
DdeI	CTNAG	9 cut(s)	597, 887, 1106, 1281, 1441, 1526, 1943, 2109, 2169
DpnI	GATC	8 cut(s)	573, 945, 1410, 1446, 1485, 1791, 1941, 2117
DpnII	GATC	8 cut(s)	571, 943, 1408, 1444, 1483, 1789, 1939, 2115
EaeI	YGGCCR	2 cut(s)	801, 1803
Eam1104I	CTCTTC	1 cut(s)	1267
EarI	CTCTTC	1 cut(s)	1267
Eco130I	CCWWGG	2 cut(s)	230, 345
Eco47I	GGWCC	4 cut(s)	220, 322, 523, 883
Eco57I	CTGAAG	3 cut(s)	1332, 1779, 1806
Eco88I	CYCGRG	1 cut(s)	1365
Eco91I	GGTNACC	2 cut(s)	1559, 2136
EcoO109I	RGGNCCY	1 cut(s)	883
EcoO65I	GGTNACC	2 cut(s)	1559, 2136
EcoRII	CCWGG	2 cut(s)	253, 1660
EcoT14I	CCWWGG	2 cut(s)	230, 345
EcoT22I	ATGCAT	1 cut(s)	856
ErhI	CCWWGG	2 cut(s)	230, 345
FalI	AAGNNNNNCTT	4 cut(s)	371, 403, 1374, 1406
FaqI	GGGAC	3 cut(s)	83, 1308, 1679
FauNDI	CATATG	2 cut(s)	608, 1114
FbaI	TGATCA	1 cut(s)	1483
FokI	GGATG	6 cut(s)	656, 1303, 1373, 1493, 1939, 1982
FspBI	CTAG	1 cut(s)	155
GlaI	GCGC	3 cut(s)	236, 666, 1032
GsuI	CTGGAG	2 cut(s)	372, 665
HaeIII	GGCC	4 cut(s)	803, 1626, 1805, 2075
HapII	CCGG	3 cut(s)	418, 847, 1627
HgaI	GACGC	2 cut(s)	1499, 1827
HhaI	GCGC	3 cut(s)	237, 667, 1033
Hin1I	GRCGYC	1 cut(s)	1819
Hin6I	GCGC	3 cut(s)	235, 665, 1031
HinP1I	GCGC	3 cut(s)	235, 665, 1031
HincII	GTYRAC	3 cut(s)	934, 1304, 1720
HindII	GTYRAC	3 cut(s)	934, 1304, 1720
HindIII	AAGCTT	1 cut(s)	1767
HinfI	GANTC	7 cut(s)	59, 192, 280, 391, 1363, 1955, 2053
HpaI	GTTAAC	1 cut(s)	934
HpaII	CCGG	3 cut(s)	418, 847, 1627
HphI	GGTGA	5 cut(s)	521, 760, 1231, 1571, 1688
Hpy166II	GTNNAC	7 cut(s)	322, 512, 934, 1097, 1304, 1331, 1720
Hpy188III	TCNNGA	8 cut(s)	215, 418, 502, 947, 992, 1493, 1601, 2079
Hpy8I	GTNNAC	7 cut(s)	322, 512, 934, 1097, 1304, 1331, 1720
Hpy99I	CGWCG	1 cut(s)	1458
HpyAV	CCTTC	3 cut(s)	7, 1400, 1917
HpyCH4III	ACNGT	6 cut(s)	84, 368, 931, 1243, 1717, 1744
HpyCH4IV	ACGT	2 cut(s)	549, 1327
HpyF10VI	GCNNNNNNNGC	6 cut(s)	479, 773, 1437, 1536, 1781, 1827
HpyF3I	CTNAG	9 cut(s)	597, 887, 1106, 1281, 1441, 1526, 1943, 2109, 2169
HpySE526I	ACGT	2 cut(s)	549, 1327
Hsp92I	GRCGYC	1 cut(s)	1819
HspAI	GCGC	3 cut(s)	235, 665, 1031
Kpn2I	TCCGGA	1 cut(s)	417
Ksp22I	TGATCA	1 cut(s)	1483
KspAI	GTTAAC	1 cut(s)	934
Kzo9I	GATC	8 cut(s)	571, 943, 1408, 1444, 1483, 1789, 1939, 2115
LmnI	GCTCC	2 cut(s)	1681, 1707
LweI	GCATC	4 cut(s)	131, 863, 1486, 2118
MaeI	CTAG	1 cut(s)	155
MaeII	ACGT	2 cut(s)	549, 1327
MaeIII	GTNAC	7 cut(s)	406, 550, 748, 1559, 1567, 2062, 2136
MalI	GATC	8 cut(s)	573, 945, 1410, 1446, 1485, 1791, 1941, 2117
MboI	GATC	8 cut(s)	571, 943, 1408, 1444, 1483, 1789, 1939, 2115
MflI	RGATCY	3 cut(s)	1444, 1789, 1939
MhlI	GDGCHC	3 cut(s)	1139, 1699, 2110
MlsI	TGGCCA	2 cut(s)	803, 1805
MluNI	TGGCCA	2 cut(s)	803, 1805
MlyI	GAGTC	1 cut(s)	1357
MmeI	TCCRAC	1 cut(s)	1080
Mox20I	TGGCCA	2 cut(s)	803, 1805
Mph1103I	ATGCAT	1 cut(s)	856
MroI	TCCGGA	1 cut(s)	417
MscI	TGGCCA	2 cut(s)	803, 1805
MseI	TTAA	6 cut(s)	716, 728, 933, 1205, 1266, 1655
MslI	CAYNNNNRTG	1 cut(s)	1574
Msp20I	TGGCCA	2 cut(s)	803, 1805
MspCI	CTTAAG	1 cut(s)	1265
MspI	CCGG	3 cut(s)	418, 847, 1627
MspR9I	CCNGG	2 cut(s)	255, 1662
Mva1269I	GAATGC	1 cut(s)	199
MvaI	CCWGG	2 cut(s)	255, 1662
MvnI	CGCG	2 cut(s)	428, 495
MwoI	GCNNNNNNNGC	6 cut(s)	479, 773, 1437, 1536, 1781, 1827
NcoI	CCATGG	2 cut(s)	230, 345
NdeI	CATATG	2 cut(s)	608, 1114
NdeII	GATC	8 cut(s)	571, 943, 1408, 1444, 1483, 1789, 1939, 2115
NlaIV	GGNNCC	2 cut(s)	324, 525
NmeAIII	GCCGAG	1 cut(s)	2157
NmuCI	GTSAC	4 cut(s)	406, 748, 1559, 1567
NsiI	ATGCAT	1 cut(s)	856
NspI	RCATGY	2 cut(s)	799, 1726
PaeR7I	CTCGAG	1 cut(s)	1365
PctI	GAATGC	1 cut(s)	199
PfeI	GAWTC	6 cut(s)	59, 192, 280, 391, 1955, 2053
PflFI	GACNNNGTC	2 cut(s)	1299, 1565
PinAI	ACCGGT	1 cut(s)	846
PleI	GAGTC	1 cut(s)	1357
PpsI	GAGTC	1 cut(s)	1357
PpuMI	RGGWCCY	1 cut(s)	883
PshBI	ATTAAT	1 cut(s)	728
PsiI	TTATAA	1 cut(s)	458
Psp5II	RGGWCCY	1 cut(s)	883
Psp6I	CCWGG	2 cut(s)	253, 1660
PspEI	GGTNACC	2 cut(s)	1559, 2136
PspGI	CCWGG	2 cut(s)	253, 1660
PspN4I	GGNNCC	2 cut(s)	324, 525
PspPI	GGNCC	4 cut(s)	220, 322, 523, 883
PspPPI	RGGWCCY	1 cut(s)	883
PspXI	VCTCGAGB	1 cut(s)	1365
PstI	CTGCAG	2 cut(s)	1842, 2152
PstNI	CAGNNNCTG	1 cut(s)	773
PsuI	RGATCY	3 cut(s)	1444, 1789, 1939
PsyI	GACNNNGTC	2 cut(s)	1299, 1565
RsaI	GTAC	8 cut(s)	332, 548, 686, 967, 1073, 1332, 1461, 1597
RsaNI	GTAC	8 cut(s)	331, 547, 685, 966, 1072, 1331, 1460, 1596
RseI	CAYNNNNRTG	1 cut(s)	1574
SaqAI	TTAA	6 cut(s)	716, 728, 933, 1205, 1266, 1655
Sau3AI	GATC	8 cut(s)	571, 943, 1408, 1444, 1483, 1789, 1939, 2115
Sau96I	GGNCC	4 cut(s)	220, 322, 523, 883
ScaI	AGTACT	1 cut(s)	1073
SchI	GAGTC	1 cut(s)	1357
ScrFI	CCNGG	2 cut(s)	255, 1662
SduI	GDGCHC	3 cut(s)	1139, 1699, 2110
SfaNI	GCATC	4 cut(s)	131, 863, 1486, 2118
SfcI	CTRYAG	2 cut(s)	1838, 2148
Sfr274I	CTCGAG	1 cut(s)	1365
SinI	GGWCC	4 cut(s)	220, 322, 523, 883
SlaI	CTCGAG	1 cut(s)	1365
SmiMI	CAYNNNNRTG	1 cut(s)	1574
SmlI	CTYRAG	5 cut(s)	1250, 1265, 1365, 1948, 2077
SmoI	CTYRAG	5 cut(s)	1250, 1265, 1365, 1948, 2077
SpeI	ACTAGT	1 cut(s)	154
SsiI	CCGC	4 cut(s)	397, 428, 590, 1674
SspI	AATATT	3 cut(s)	914, 1020, 2180
SspMI	CTAG	1 cut(s)	155
StyD4I	CCNGG	2 cut(s)	253, 1660
StyI	CCWWGG	2 cut(s)	230, 345
TaaI	ACNGT	6 cut(s)	84, 368, 931, 1243, 1717, 1744
TaiI	ACGT	2 cut(s)	552, 1330
TaqI	TCGA	5 cut(s)	88, 283, 1366, 1453, 1602
TatI	WGTACW	3 cut(s)	330, 684, 1071
TauI	GCSGC	1 cut(s)	592
TfiI	GAWTC	6 cut(s)	59, 192, 280, 391, 1955, 2053
Tru1I	TTAA	6 cut(s)	716, 728, 933, 1205, 1266, 1655
Tru9I	TTAA	6 cut(s)	716, 728, 933, 1205, 1266, 1655
TscAI	CASTG	3 cut(s)	1285, 1704, 2173
TseFI	GTSAC	4 cut(s)	406, 748, 1559, 1567
Tsp45I	GTSAC	4 cut(s)	406, 748, 1559, 1567
TspGWI	ACGGA	2 cut(s)	656, 1348
TspRI	CASTG	3 cut(s)	1285, 1704, 2173
Tth111I	GACNNNGTC	2 cut(s)	1299, 1565
Vha464I	CTTAAG	1 cut(s)	1265
VpaK11BI	GGWCC	4 cut(s)	220, 322, 523, 883
VspI	ATTAAT	1 cut(s)	728
XapI	RAATTY	4 cut(s)	869, 1123, 1796, 2012
XceI	RCATGY	2 cut(s)	799, 1726
XhoI	CTCGAG	1 cut(s)	1365
XspI	CTAG	1 cut(s)	155
ZrmI	AGTACT	1 cut(s)	1073
Zsp2I	ATGCAT	1 cut(s)	856

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.