FvH4_4g10620

Folic acid synthesis protein

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
Physical Location & Seq
Forward (+)
14356436 .. 14358324
1889 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g10620.t1

Sequence Viewer

Length: 1554 bp
ATGCATATATTCAAGCAGCTTCTGCCTGGCATAAGTCAATTAAATGGTGCCAGAAAGTATTATCAAGCATCATGTTTTGCCTTTATACATTCATGCCCAAAATCCTCTGTGGAAGTCCATTCTGAAGATCAGGAAGTAGTGATTGCTTTGGGAAGCAATGTGGGTGACAGACTACATAATTTCAATGAAGCCTTGCAGTTAATGAAAAAATCAGGCATGCAAATTACAAGACATGGCTGTTTGTATGAGACCGCACCAGCCTATGTAACAGATCAGCCTAATTTCCTTAATTCTGCTGTTAGAGCAGTTACAAAACTTGGGCCTCATGAGCTATTAGGAGCACTGAAGAGAATTGAAAAGGACTTGGGTCGTACCCAAGGTATAAGGTATGGTCCCAGGCCTATTGACTTGGATATATTATTCTATGGGAAGTTAAAAGTCAGATCTGAGACTCTTACGATCCCCCATGAAAGAATTTGGGAAAGACCATTTGTCATAGCCCCACTAATGGATTTGCTGGGTTCAGCTATTGACAGTGATGTAGTTGCTTGTTGGCATTCTTTCTCCACACATTCTGGTGGGCTTTTCAAGTCTTGGGAGAAGTTAGGCGGCGATTCCCTCATCGGAAAGGAAGGTCTCAAGAGGGTCTTACCCATTGGAAATGGCTTGTGGGACTGGTCAACGAAAACCTCTATCATGGGTATTCTTAATCTGACTCCAGATAGTTTTAGCGATGGAGGAAAATTTGAATCTTTGGAGGCAGCGGTTGCTCAGGTTCAATTGATGATTTCAGAAGGGGCAGATATGATTGATATTGGTGCACAATCAACAAGGCCAATGGCATCTAGAATTTCAGTTGAACAAGAACTGGATAGACTAATCCCTGTCCTCGAAGCAGTTGTTAGGATGCCAGAAGTAGAGGGAAAGTTGGTATCTGTGGATACATTTCATTCAGAAGTTGCTTCTGAAGCGGTTAGCAAAGGGGCTCATATTGTAAATGATGTATCTGCTGGTCAGTTGGACTCTAACATGCTTAGTATTGTTGCAGGCCTCAGGGTACCTTACATTGCAATGCATATGAGGGGGGATCCTTCTACAATGCAGAACAGTGAAAACCTTCAATATGATGATGTTTGTAAGCAGGTTGCCTCTGAGCTATTATTGAGGGTGAGAGATGCAGAAGTGTTAGGCATCCCAGCTTGGCGGATAATCATTGATCCTGGAATTGGATTTTCAAAGAATACTGAACAGAATCTGGATATCTTAATGGGGTTACCAAATATTCAAGAGGAAATTGGGAGGAGAAGTTTGGCTTTATCTCACGCACCCATAATGATCGGACCTTCCAGAAAGAAATTCTTAGGTGAAGTATGTAATCGCAAGGCTGCGATCGAGAGAGATCCCGCTACTGTTGCTTCTGTGACTGCTGGTGTTTTGGCTGGAGCAAATATTGTAAGAGTGCACAATGTGAGGGATAATCTAGATGCTGTGAAGCTATGTGATGCAATGCGTAGACAGAAGAGAGCTTTTCCTCAAATTAAGAACGATTTATGA

Protein Analysis

518

Amino Acids

56.81

Weight (kDa)

6.55

Isoelectric Point (pI)

43.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HPPK PF01288 47 - 172 4e-35 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
Pterin_bind PF00809 233 - 488 1.1e-82 Pterin binding enzyme
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1132
Acc65I GGTACC 1 cut(s) 1057
AccB1I GGYRCC 2 cut(s) 47, 1057
AccI GTMKAC 1 cut(s) 1513
AciI CCGC 6 cut(s) 252, 609, 764, 971, 1204, 1404
AclWI GGATC 5 cut(s) 454, 1082, 1095, 1211, 1394
AcsI RAATTY 4 cut(s) 474, 743, 849, 1355
AcuI CTGAAG 3 cut(s) 144, 365, 987
AdeI CACNNNGTG 1 cut(s) 1468
AfaI GTAC 2 cut(s) 373, 1059
AfiI CCNNNNNNNGG 2 cut(s) 508, 1226
AhdI GACNNNNNGTC 1 cut(s) 491
AjnI CCWGG 3 cut(s) 25, 395, 1219
AluBI AGCT 7 cut(s) 19, 331, 527, 1156, 1199, 1495, 1526
AluI AGCT 7 cut(s) 19, 331, 527, 1156, 1199, 1495, 1526
Alw21I GWGCWC 3 cut(s) 343, 823, 1464
Alw26I GTCTC 3 cut(s) 242, 443, 641
Alw44I GTGCAC 2 cut(s) 819, 1460
AlwI GGATC 5 cut(s) 454, 1082, 1095, 1211, 1394
AlwNI CAGNNNCTG 2 cut(s) 22, 1255
AoxI GGCC 4 cut(s) 320, 398, 833, 1048
ApaLI GTGCAC 2 cut(s) 819, 1460
ApeKI GCWGC 3 cut(s) 16, 761, 1385
ApoI RAATTY 4 cut(s) 474, 743, 849, 1355
Asp700I GAANNNNTTC 1 cut(s) 1116
Asp718I GGTACC 1 cut(s) 1057
AspS9I GGNCC 3 cut(s) 320, 392, 1340
AsuHPI GGTGA 3 cut(s) 176, 1180, 1376
AvaII GGWCC 2 cut(s) 392, 1340
AxyI CCTNAGG 1 cut(s) 1052
BaeGI GKGCMC 2 cut(s) 823, 1464
BamHI GGATCC 1 cut(s) 1087
BanI GGYRCC 2 cut(s) 47, 1057
BanII GRGCYC 1 cut(s) 988
Bbv12I GWGCWC 3 cut(s) 343, 823, 1464
BbvI GCAGC 3 cut(s) 28, 773, 1372
BccI CCATC 1 cut(s) 728
BciT130I CCWGG 3 cut(s) 27, 397, 1221
BciVI GTATCC 1 cut(s) 934
BcoDI GTCTC 3 cut(s) 242, 443, 641
BfaI CTAG 2 cut(s) 846, 1481
BfuAI ACCTGC 1 cut(s) 1132
BfuI GTATCC 1 cut(s) 934
BglII AGATCT 1 cut(s) 443
BisI GCNGC 4 cut(s) 17, 610, 762, 1386
BlsI GCNGC 4 cut(s) 18, 611, 763, 1387
Bme1390I CCNGG 3 cut(s) 27, 397, 1221
Bme18I GGWCC 2 cut(s) 392, 1340
BmeRI GACNNNNNGTC 1 cut(s) 491
BmgT120I GGNCC 3 cut(s) 320, 392, 1340
BmiI GGNNCC 4 cut(s) 49, 394, 1059, 1089
BmrFI CCNGG 3 cut(s) 27, 397, 1221
BmsI GCATC 7 cut(s) 77, 851, 897, 1165, 1200, 1474, 1492
BoxI GACNNNNGTC 1 cut(s) 366
BpmI CTGGAG 2 cut(s) 702, 1461
Bpu10I CCTNAGC 1 cut(s) 771
BpuEI CTTGAG 1 cut(s) 623
BsaI GGTCTC 2 cut(s) 242, 641
BsaJI CCNNGG 2 cut(s) 376, 395
BsaXI ACNNNNNCTCC 2 cut(s) 1291, 1321
Bsc4I CCNNNNNNNGG 2 cut(s) 508, 1226
Bse1I ACTGG 2 cut(s) 680, 873
Bse21I CCTNAGG 1 cut(s) 1052
Bse3DI GCAATG 4 cut(s) 163, 1065, 1077, 1512
BseBI CCWGG 3 cut(s) 27, 397, 1221
BseDI CCNNGG 2 cut(s) 376, 395
BseGI GGATG 2 cut(s) 912, 1191
BseLI CCNNNNNNNGG 2 cut(s) 508, 1226
BseMI GCAATG 4 cut(s) 163, 1065, 1077, 1512
BseMII CTCAG 4 cut(s) 438, 785, 1066, 1143
BseNI ACTGG 2 cut(s) 680, 873
BseRI GAGGAG 1 cut(s) 1315
BseSI GKGCMC 2 cut(s) 823, 1464
BseXI GCAGC 3 cut(s) 28, 773, 1372
BseYI CCCAGC 2 cut(s) 517, 1195
Bsh1285I CGRYCG 1 cut(s) 1392
BshFI GGCC 4 cut(s) 322, 400, 835, 1050
BshNI GGYRCC 2 cut(s) 47, 1057
BsiEI CGRYCG 1 cut(s) 1392
BsiHKAI GWGCWC 3 cut(s) 343, 823, 1464
BslFI GGGAC 2 cut(s) 378, 686
BslI CCNNNNNNNGG 2 cut(s) 508, 1226
BsmAI GTCTC 3 cut(s) 242, 443, 641
BsmFI GGGAC 2 cut(s) 378, 686
BsmI GAATGC 1 cut(s) 556
BsnI GGCC 4 cut(s) 322, 400, 835, 1050
Bso31I GGTCTC 2 cut(s) 242, 641
Bsp1286I GDGCHC 4 cut(s) 343, 823, 988, 1464
Bsp143I GATC 9 cut(s) 127, 271, 443, 459, 1087, 1216, 1335, 1389, 1399
BspACI CCGC 6 cut(s) 252, 609, 764, 971, 1204, 1404
BspANI GGCC 4 cut(s) 322, 400, 835, 1050
BspCNI CTCAG 4 cut(s) 439, 784, 1065, 1144
BspHI TCATGA 1 cut(s) 325
BspLI GGNNCC 4 cut(s) 49, 394, 1059, 1089
BspMI ACCTGC 1 cut(s) 1132
BspPI GGATC 5 cut(s) 454, 1082, 1095, 1211, 1394
BspT107I GGYRCC 2 cut(s) 47, 1057
BspTNI GGTCTC 2 cut(s) 242, 641
BsrDI GCAATG 4 cut(s) 163, 1065, 1077, 1512
BsrI ACTGG 2 cut(s) 680, 873
BssECI CCNNGG 2 cut(s) 376, 395
BssMI GATC 9 cut(s) 127, 271, 443, 459, 1087, 1216, 1335, 1389, 1399
BssT1I CCWWGG 1 cut(s) 376
Bst2UI CCWGG 3 cut(s) 27, 397, 1221
Bst4CI ACNGT 3 cut(s) 536, 1109, 1411
Bst6I CTCTTC 2 cut(s) 341, 1514
BstAPI GCANNNNNTGC 2 cut(s) 22, 767
BstC8I GCNNGC 2 cut(s) 218, 1048
BstDEI CTNAG 6 cut(s) 447, 771, 1034, 1052, 1152, 1360
BstEII GGTNACC 1 cut(s) 1272
BstF5I GGATG 2 cut(s) 912, 1191
BstKTI GATC 9 cut(s) 130, 274, 446, 462, 1090, 1219, 1338, 1392, 1402
BstMAI GTCTC 3 cut(s) 242, 443, 641
BstMBI GATC 9 cut(s) 127, 271, 443, 459, 1087, 1216, 1335, 1389, 1399
BstMCI CGRYCG 1 cut(s) 1392
BstMWI GCNNNNNNNGC 6 cut(s) 22, 302, 328, 767, 968, 1412
BstNI CCWGG 3 cut(s) 27, 397, 1221
BstNSI RCATGY 2 cut(s) 220, 1033
BstPAI GACNNNNGTC 1 cut(s) 366
BstPI GGTNACC 1 cut(s) 1272
BstSCI CCNGG 3 cut(s) 25, 395, 1219
BstSLI GKGCMC 2 cut(s) 823, 1464
BstV1I GCAGC 3 cut(s) 28, 773, 1372
BstX2I RGATCY 3 cut(s) 443, 1087, 1399
BstYI RGATCY 3 cut(s) 443, 1087, 1399
Bsu36I CCTNAGG 1 cut(s) 1052
BsuI GTATCC 1 cut(s) 934
BsuRI GGCC 4 cut(s) 322, 400, 835, 1050
BtgZI GCGATG 1 cut(s) 747
BtsCI GGATG 2 cut(s) 912, 1191
BtsIMutI CAGTG 3 cut(s) 341, 541, 1114
BveI ACCTGC 1 cut(s) 1132
Cac8I GCNNGC 2 cut(s) 218, 1048
CaiI CAGNNNCTG 2 cut(s) 22, 1255
CciI TCATGA 1 cut(s) 325
Cfr13I GGNCC 3 cut(s) 320, 392, 1340
Csp6I GTAC 2 cut(s) 372, 1058
CviAII CATG 8 cut(s) 72, 93, 217, 233, 326, 467, 697, 1030
CviQI GTAC 2 cut(s) 372, 1058
DdeI CTNAG 6 cut(s) 447, 771, 1034, 1052, 1152, 1360
DpnI GATC 9 cut(s) 129, 273, 445, 461, 1089, 1218, 1337, 1391, 1401
DpnII GATC 9 cut(s) 127, 271, 443, 459, 1087, 1216, 1335, 1389, 1399
DraIII CACNNNGTG 1 cut(s) 1468
DriI GACNNNNNGTC 1 cut(s) 491
Eam1104I CTCTTC 2 cut(s) 341, 1514
Eam1105I GACNNNNNGTC 1 cut(s) 491
EarI CTCTTC 2 cut(s) 341, 1514
EciI GGCGGA 1 cut(s) 1219
Eco130I CCWWGG 1 cut(s) 376
Eco147I AGGCCT 2 cut(s) 400, 1050
Eco24I GRGCYC 1 cut(s) 988
Eco31I GGTCTC 2 cut(s) 242, 641
Eco32I GATATC 1 cut(s) 1261
Eco47I GGWCC 2 cut(s) 392, 1340
Eco57I CTGAAG 3 cut(s) 144, 365, 987
Eco81I CCTNAGG 1 cut(s) 1052
Eco91I GGTNACC 1 cut(s) 1272
EcoO65I GGTNACC 1 cut(s) 1272
EcoRII CCWGG 3 cut(s) 25, 395, 1219
EcoRV GATATC 1 cut(s) 1261
EcoT14I CCWWGG 1 cut(s) 376
EcoT22I ATGCAT 2 cut(s) 6, 1077
EcoT38I GRGCYC 1 cut(s) 988
ErhI CCWWGG 1 cut(s) 376
FaeI CATG 8 cut(s) 75, 96, 220, 236, 329, 470, 700, 1033
FalI AAGNNNNNCTT 6 cut(s) 632, 664, 1297, 1329, 1343, 1375
FaqI GGGAC 2 cut(s) 378, 686
FatI CATG 8 cut(s) 71, 92, 216, 232, 325, 466, 696, 1029
FauI CCCGC 1 cut(s) 1411
FauNDI CATATG 1 cut(s) 1077
FblI GTMKAC 1 cut(s) 1513
Fnu4HI GCNGC 4 cut(s) 17, 610, 762, 1386
FokI GGATG 2 cut(s) 919, 1178
FriOI GRGCYC 1 cut(s) 988
Fsp4HI GCNGC 4 cut(s) 17, 610, 762, 1386
FspBI CTAG 2 cut(s) 846, 1481
GluI GCNGC 4 cut(s) 17, 610, 762, 1386
GsaI CCCAGC 2 cut(s) 521, 1199
GsuI CTGGAG 2 cut(s) 702, 1461
HaeIII GGCC 4 cut(s) 322, 400, 835, 1050
Hin1II CATG 8 cut(s) 75, 96, 220, 236, 329, 470, 700, 1033
HincII GTYRAC 1 cut(s) 681
HindII GTYRAC 1 cut(s) 681
HinfI GANTC 6 cut(s) 451, 614, 715, 749, 1022, 1252
HphI GGTGA 3 cut(s) 176, 1180, 1376
Hpy166II GTNNAC 4 cut(s) 681, 821, 1462, 1514
Hpy8I GTNNAC 4 cut(s) 681, 821, 1462, 1514
HpyAV CCTTC 5 cut(s) 626, 788, 1101, 1127, 1353
HpyCH4III ACNGT 3 cut(s) 536, 1109, 1411
HpyF10VI GCNNNNNNNGC 6 cut(s) 22, 302, 328, 767, 968, 1412
HpyF3I CTNAG 6 cut(s) 447, 771, 1034, 1052, 1152, 1360
Hsp92II CATG 8 cut(s) 75, 96, 220, 236, 329, 470, 700, 1033
KpnI GGTACC 1 cut(s) 1061
Kzo9I GATC 9 cut(s) 127, 271, 443, 459, 1087, 1216, 1335, 1389, 1399
LmnI GCTCC 2 cut(s) 338, 1442
Lsp1109I GCAGC 3 cut(s) 28, 773, 1372
LweI GCATC 7 cut(s) 77, 851, 897, 1165, 1200, 1474, 1492
MaeI CTAG 2 cut(s) 846, 1481
MaeIII GTNAC 5 cut(s) 164, 265, 307, 1272, 1420
MalI GATC 9 cut(s) 129, 273, 445, 461, 1089, 1218, 1337, 1391, 1401
MboI GATC 9 cut(s) 127, 271, 443, 459, 1087, 1216, 1335, 1389, 1399
MboII GAAGA 3 cut(s) 137, 358, 1531
MfeI CAATTG 1 cut(s) 779
MflI RGATCY 3 cut(s) 443, 1087, 1399
MhlI GDGCHC 4 cut(s) 343, 823, 988, 1464
MlyI GAGTC 3 cut(s) 445, 709, 1016
MmeI TCCRAC 1 cut(s) 999
Mph1103I ATGCAT 2 cut(s) 6, 1077
MroXI GAANNNNTTC 1 cut(s) 1116
MseI TTAA 7 cut(s) 41, 200, 288, 434, 708, 1265, 1539
MslI CAYNNNNRTG 2 cut(s) 576, 1070
MspA1I CMGCKG 1 cut(s) 764
MspR9I CCNGG 3 cut(s) 27, 397, 1221
MunI CAATTG 1 cut(s) 779
Mva1269I GAATGC 1 cut(s) 556
MvaI CCWGG 3 cut(s) 27, 397, 1221
MwoI GCNNNNNNNGC 6 cut(s) 22, 302, 328, 767, 968, 1412
NdeI CATATG 1 cut(s) 1077
NdeII GATC 9 cut(s) 127, 271, 443, 459, 1087, 1216, 1335, 1389, 1399
NlaIII CATG 8 cut(s) 75, 96, 220, 236, 329, 470, 700, 1033
NlaIV GGNNCC 4 cut(s) 49, 394, 1059, 1089
NmuCI GTSAC 2 cut(s) 164, 1420
NsiI ATGCAT 2 cut(s) 6, 1077
NspI RCATGY 2 cut(s) 220, 1033
PaeI GCATGC 1 cut(s) 220
PagI TCATGA 1 cut(s) 325
PceI AGGCCT 2 cut(s) 400, 1050
PctI GAATGC 1 cut(s) 556
PdmI GAANNNNTTC 1 cut(s) 1116
PfeI GAWTC 3 cut(s) 614, 749, 1252
PfoI TCCNGGA 1 cut(s) 1219
PkrI GCNGC 4 cut(s) 18, 611, 763, 1387
Ple19I CGATCG 1 cut(s) 1392
PleI GAGTC 3 cut(s) 445, 709, 1016
PpsI GAGTC 3 cut(s) 445, 709, 1016
PshAI GACNNNNGTC 1 cut(s) 366
Psp6I CCWGG 3 cut(s) 25, 395, 1219
PspEI GGTNACC 1 cut(s) 1272
PspFI CCCAGC 2 cut(s) 517, 1195
PspGI CCWGG 3 cut(s) 25, 395, 1219
PspN4I GGNNCC 4 cut(s) 49, 394, 1059, 1089
PspPI GGNCC 3 cut(s) 320, 392, 1340
PstNI CAGNNNCTG 2 cut(s) 22, 1255
PsuI RGATCY 3 cut(s) 443, 1087, 1399
PvuI CGATCG 1 cut(s) 1392
RsaI GTAC 2 cut(s) 373, 1059
RsaNI GTAC 2 cut(s) 372, 1058
RseI CAYNNNNRTG 2 cut(s) 576, 1070
SaqAI TTAA 7 cut(s) 41, 200, 288, 434, 708, 1265, 1539
SatI GCNGC 4 cut(s) 17, 610, 762, 1386
Sau3AI GATC 9 cut(s) 127, 271, 443, 459, 1087, 1216, 1335, 1389, 1399
Sau96I GGNCC 3 cut(s) 320, 392, 1340
SchI GAGTC 3 cut(s) 445, 709, 1016
ScrFI CCNGG 3 cut(s) 27, 397, 1221
SduI GDGCHC 4 cut(s) 343, 823, 988, 1464
SfaNI GCATC 7 cut(s) 77, 851, 897, 1165, 1200, 1474, 1492
SinI GGWCC 2 cut(s) 392, 1340
SmiMI CAYNNNNRTG 2 cut(s) 576, 1070
SmlI CTYRAG 1 cut(s) 638
SmoI CTYRAG 1 cut(s) 638
SphI GCATGC 1 cut(s) 220
SseBI AGGCCT 2 cut(s) 400, 1050
SsiI CCGC 6 cut(s) 252, 609, 764, 971, 1204, 1404
SspI AATATT 2 cut(s) 1282, 1450
SspMI CTAG 2 cut(s) 846, 1481
StuI AGGCCT 2 cut(s) 400, 1050
StyD4I CCNGG 3 cut(s) 25, 395, 1219
StyI CCWWGG 1 cut(s) 376
TaaI ACNGT 3 cut(s) 536, 1109, 1411
TaqI TCGA 2 cut(s) 891, 1392
TauI GCSGC 1 cut(s) 612
TfiI GAWTC 3 cut(s) 614, 749, 1252
Tru1I TTAA 7 cut(s) 41, 200, 288, 434, 708, 1265, 1539
Tru9I TTAA 7 cut(s) 41, 200, 288, 434, 708, 1265, 1539
TscAI CASTG 3 cut(s) 348, 541, 1114
TseFI GTSAC 2 cut(s) 164, 1420
TseI GCWGC 3 cut(s) 16, 761, 1385
Tsp45I GTSAC 2 cut(s) 164, 1420
TspDTI ATGAA 5 cut(s) 81, 201, 218, 483, 938
TspRI CASTG 3 cut(s) 348, 541, 1114
VneI GTGCAC 2 cut(s) 819, 1460
VpaK11BI GGWCC 2 cut(s) 392, 1340
XapI RAATTY 4 cut(s) 474, 743, 849, 1355
XbaI TCTAGA 2 cut(s) 845, 1480
XceI RCATGY 2 cut(s) 220, 1033
XmiI GTMKAC 1 cut(s) 1513
XmnI GAANNNNTTC 1 cut(s) 1116
XspI CTAG 2 cut(s) 846, 1481
Zsp2I ATGCAT 2 cut(s) 6, 1077
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.