Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0006764

Physical Location & Seq

Genomic Coordinates Reverse (-)

40190924 .. 40195717

Gene Structure 4794 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00246870.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1539 bp

ATGCATATATTCAAGCAGCTTCTGCCCGACATAAGTCGATTAAATGGTGCCAAAAAGTATTTTCAAGCATCATGTTTTGCCTTTATACATTCAAGCCCAAACTCCCCAGTAGAAGTTCATTCTCAAGATCAGGAAGTAGTGATTGCTTTGGGAAGCAATGTGGGTGACAGACTACATAATTTCAATGAAGCCTTGCAGTTGATGAAAAAATCAGGCGTGCAAATAACAAGACATGGCTGTTTGTATGAGACAGCACCAGCCTACGTAACTGACCAGCCGAACTTTTTAAACTCTGCAGTTAGAGCGGTTACAAAACTTGGGCCTCATGAGCTATTAGGAGCACTGAAGAAAATTGAAAAGGACATGGGTCGTACCCAAGGTATACGGTATGGTCCCAGGCCTATTGACTTGGATATATTGTTTTATGGGAAGTTAAGAGTCAGATCTGAGATTCTTACAATCCCTCATGAAAGAATTTGGGAAAGACCGTTTGTAATAGCCCCATTATTGGATTTGCTGGGATCAGCTATTGATAGTGATGTAGTTGCTTGTTGGCATTCTTTCTCCATGCATTCTGGTGGGCTTTTTGAGTCTTGGGAGAAGTTGGGCGGTGATTCCCTCATTGGAAAAGAAGGTCTCAAGAGGGTTTTGCCCATTGGAAATGGCTTGTGGGACTGGTCAATGAAAACCTCAGTCATGGGAATCCTTAATCTGACTCCAGATAGTTTTAGTGATGGAGGAAAATTTGAGTCTGTGGAGGCAGCGGTTTCTCAGGTTCGATTGATGATTTCAGAAGGGGCAGATATGATTGATCTTGGTGCACAGTCAACGCGGCCATTGGCTTCTAGAATTTCAGTTGAACAAGAATCGGATAGACTAATCCCAGTCCTAGAAGCAGTTGTTAGGATGCCTGAAGTAGAGGGCAAGCTTATATCTGTGGATACATTTTATTCAGAAGTTGCTTCTGAAGCAGTTAGTAAAGGGGCTCATATTGTAAATGATGTATCTGCTGGTCAGTTGGACTCTAACATGCTTAATGTTGTTGCAGGCCTTAGGGTACCTTACATTGCAATGCACATGAGGGGGGATCCTTCTACAATGCAGAACAGTGAAAACCTTCAATATGATGATGTTTGTAAGCAGGTTGCCTCCGAGCTATTATTGAGGGTGAGAGATGCAGAAGTATTAGGTATCCCAGCTTGGAGGATAATCATTGACCCTGGAATTGGATTTTCAAAGAATACTGAACAGAATCTGGATATCTTAATGGGGTTACCAAATATTCAAGAGGAAATTGGGAGGAAAAGTTTGGCATTATCTCATGCACCCATAATGATCGGATCTTCGAGAAAGAAATTCTTAGGTGAAATATGTAATCGCAAGGCTGCGATTGAGAGGGATCCTGCTACTGTTGCTTCTGTCACTGCCGGAGTTTTGGGCGGAGCAAATATGGTAAGAGTGCACAATGTGAGGGATAATCTAGATGCTGTGAAGCTATGTGATGCTATGCTGAGACGGAAGAGATCTTTTCCTCAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003848 GO:0004156 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006575 GO:0006725 GO:0006732 GO:0006760 GO:0006807 GO:0006950 GO:0006979 GO:0008150 GO:0008152 GO:0009058 GO:0009108 GO:0009396 GO:0009987 GO:0016053 GO:0016740 GO:0016765 GO:0016772 GO:0016778 GO:0018130 GO:0019438 GO:0019752 GO:0034641 GO:0042398 GO:0042558 GO:0042559 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0046483 GO:0046653 GO:0046654 GO:0050896 GO:0051186 GO:0051188 GO:0071704 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00790 ko01100 map00790 map01100

Pfam Domains

Protein Families

HPPK Pterin_bind

Protein Analysis

512

Amino Acids

56.3

Weight (kDa)

6.38

Isoelectric Point (pI)

47.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HPPK	PF01288	47 - 172	2.6e-35	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
Pterin_bind	PF00809	233 - 488	6.8e-81	Pterin binding enzyme

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006764)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G30000 AT4G30000
fragaria_vesca	FvH4_4g10620
malus_domestica	MD06G1024100.v1.1 MD16G1281400.v1.1
prunus_persica	Prupe.1G566200_v2.0.a1 Prupe.1G566200_v2.0.a1
pyrus_communis	pycom1546g00020 pycom15g25320 pycom16g22310
rosa_chinensis	RchiOBHm_Chr2g0139531 RchiOBHm_Chr2g0139541 RchiOBHm_Chr7g0212391
rosa_laevigata	RLG00000002893
rosa_multiflora	Rmu_sc0038441.1_g000001
rosa_roxburghii	Rroxscaffold_3G00246870
rosa_rugosa	Rorug07G0133500 Rorug07G0133600 Rorug07G0133700
rosa_samantha	Rh2BG418400 Rh2DG427200 Rh7AG266500 Rh7BG260600 Rh7CG283400 Rh7DG273500
rosa_wichuraiana	Rw7G022790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1132
Acc65I	GGTACC	1 cut(s)	1057
AccB1I	GGYRCC	2 cut(s)	47, 1057
AccBSI	CCGCTC	1 cut(s)	305
AccI	GTMKAC	1 cut(s)	382
AccII	CGCG	1 cut(s)	832
AciI	CCGC	5 cut(s)	305, 609, 764, 832, 1440
AclWI	GGATC	6 cut(s)	529, 1082, 1095, 1348, 1394, 1407
AcoI	YGGCCR	1 cut(s)	833
AcsI	RAATTY	4 cut(s)	474, 743, 849, 1355
AcuI	CTGAAG	3 cut(s)	365, 933, 987
AdeI	CACNNNGTG	1 cut(s)	1468
AfaI	GTAC	2 cut(s)	373, 1059
AfiI	CCNNNNNNNGG	2 cut(s)	508, 1226
AgsI	TTSAA	9 cut(s)	13, 65, 93, 184, 356, 860, 1121, 1236, 1286
AjnI	CCWGG	2 cut(s)	395, 1219
AluBI	AGCT	7 cut(s)	19, 331, 527, 928, 1156, 1199, 1495
AluI	AGCT	7 cut(s)	19, 331, 527, 928, 1156, 1199, 1495
Alw21I	GWGCWC	3 cut(s)	343, 823, 1464
Alw26I	GTCTC	3 cut(s)	242, 641, 1507
Alw44I	GTGCAC	2 cut(s)	819, 1460
AlwI	GGATC	6 cut(s)	529, 1082, 1095, 1348, 1394, 1407
AlwNI	CAGNNNCTG	2 cut(s)	22, 1255
AoxI	GGCC	4 cut(s)	320, 398, 833, 1048
ApaLI	GTGCAC	2 cut(s)	819, 1460
ApeKI	GCWGC	3 cut(s)	16, 761, 1385
ApoI	RAATTY	4 cut(s)	474, 743, 849, 1355
Asp700I	GAANNNNTTC	1 cut(s)	1116
Asp718I	GGTACC	1 cut(s)	1057
AspS9I	GGNCC	2 cut(s)	320, 392
AsuHPI	GGTGA	4 cut(s)	176, 623, 1180, 1376
AvaII	GGWCC	1 cut(s)	392
AxyI	CCTNAGG	1 cut(s)	1052
BaeGI	GKGCMC	2 cut(s)	823, 1464
BamHI	GGATCC	2 cut(s)	1087, 1399
BanI	GGYRCC	2 cut(s)	47, 1057
BanII	GRGCYC	1 cut(s)	988
Bbv12I	GWGCWC	3 cut(s)	343, 823, 1464
BbvI	GCAGC	3 cut(s)	28, 773, 1372
BccI	CCATC	1 cut(s)	728
BciT130I	CCWGG	2 cut(s)	397, 1221
BciVI	GTATCC	2 cut(s)	934, 1202
BcoDI	GTCTC	3 cut(s)	242, 641, 1507
BfaI	CTAG	3 cut(s)	846, 890, 1481
BfmI	CTRYAG	1 cut(s)	294
BfuAI	ACCTGC	1 cut(s)	1132
BfuI	GTATCC	2 cut(s)	934, 1202
BglII	AGATCT	2 cut(s)	443, 1523
BisI	GCNGC	4 cut(s)	17, 762, 833, 1386
BlsI	GCNGC	4 cut(s)	18, 763, 834, 1387
Bme1390I	CCNGG	2 cut(s)	397, 1221
Bme18I	GGWCC	1 cut(s)	392
BmgT120I	GGNCC	2 cut(s)	320, 392
BmiI	GGNNCC	5 cut(s)	49, 394, 1059, 1089, 1401
BmrFI	CCNGG	2 cut(s)	397, 1221
BmrI	ACTGGG	2 cut(s)	101, 878
BmsI	GCATC	5 cut(s)	77, 897, 1165, 1474, 1492
BmuI	ACTGGG	2 cut(s)	101, 878
BoxI	GACNNNNGTC	2 cut(s)	33, 366
BpmI	CTGGAG	1 cut(s)	702
BpuEI	CTTGAG	2 cut(s)	108, 623
BsaAI	YACGTR	1 cut(s)	265
BsaI	GGTCTC	1 cut(s)	641
BsaJI	CCNNGG	3 cut(s)	376, 395, 1219
BsaXI	ACNNNNNCTCC	2 cut(s)	1291, 1321
Bsc4I	CCNNNNNNNGG	2 cut(s)	508, 1226
Bse1I	ACTGG	3 cut(s)	107, 680, 884
Bse21I	CCTNAGG	1 cut(s)	1052
Bse3DI	GCAATG	3 cut(s)	163, 1065, 1077
BseBI	CCWGG	2 cut(s)	397, 1221
BseDI	CCNNGG	3 cut(s)	376, 395, 1219
BseGI	GGATG	1 cut(s)	912
BseLI	CCNNNNNNNGG	2 cut(s)	508, 1226
BseMI	GCAATG	3 cut(s)	163, 1065, 1077
BseMII	CTCAG	4 cut(s)	438, 705, 785, 1502
BseNI	ACTGG	3 cut(s)	107, 680, 884
BseSI	GKGCMC	2 cut(s)	823, 1464
BseXI	GCAGC	3 cut(s)	28, 773, 1372
BseYI	CCCAGC	2 cut(s)	517, 1195
Bsh1236I	CGCG	1 cut(s)	832
BshFI	GGCC	4 cut(s)	322, 400, 835, 1050
BshNI	GGYRCC	2 cut(s)	47, 1057
BsiHKAI	GWGCWC	3 cut(s)	343, 823, 1464
BsiSI	CCGG	1 cut(s)	1428
BslFI	GGGAC	2 cut(s)	378, 686
BslI	CCNNNNNNNGG	2 cut(s)	508, 1226
BsmAI	GTCTC	3 cut(s)	242, 641, 1507
BsmBI	CGTCTC	1 cut(s)	1507
BsmFI	GGGAC	2 cut(s)	378, 686
BsmI	GAATGC	2 cut(s)	556, 571
BsnI	GGCC	4 cut(s)	322, 400, 835, 1050
Bso31I	GGTCTC	1 cut(s)	641
Bsp1286I	GDGCHC	4 cut(s)	343, 823, 988, 1464
Bsp143I	GATC	9 cut(s)	127, 443, 521, 811, 1087, 1335, 1340, 1399, 1523
BspACI	CCGC	5 cut(s)	305, 609, 764, 832, 1440
BspANI	GGCC	4 cut(s)	322, 400, 835, 1050
BspCNI	CTCAG	4 cut(s)	439, 704, 784, 1503
BspFNI	CGCG	1 cut(s)	832
BspHI	TCATGA	2 cut(s)	325, 466
BspLI	GGNNCC	5 cut(s)	49, 394, 1059, 1089, 1401
BspMAI	CTGCAG	1 cut(s)	298
BspMI	ACCTGC	1 cut(s)	1132
BspPI	GGATC	6 cut(s)	529, 1082, 1095, 1348, 1394, 1407
BspT107I	GGYRCC	2 cut(s)	47, 1057
BspTNI	GGTCTC	1 cut(s)	641
BsrBI	CCGCTC	1 cut(s)	305
BsrDI	GCAATG	3 cut(s)	163, 1065, 1077
BsrI	ACTGG	3 cut(s)	107, 680, 884
BssECI	CCNNGG	3 cut(s)	376, 395, 1219
BssMI	GATC	9 cut(s)	127, 443, 521, 811, 1087, 1335, 1340, 1399, 1523
BssNAI	GTATAC	1 cut(s)	383
BssT1I	CCWWGG	1 cut(s)	376
Bst1107I	GTATAC	1 cut(s)	383
Bst2UI	CCWGG	2 cut(s)	397, 1221
Bst4CI	ACNGT	5 cut(s)	387, 489, 825, 1109, 1411
Bst6I	CTCTTC	1 cut(s)	1514
BstAPI	GCANNNNNTGC	1 cut(s)	22
BstBAI	YACGTR	1 cut(s)	265
BstC8I	GCNNGC	3 cut(s)	218, 926, 1048
BstDEI	CTNAG	6 cut(s)	447, 691, 771, 1052, 1360, 1511
BstEII	GGTNACC	1 cut(s)	1272
BstF5I	GGATG	1 cut(s)	912
BstFNI	CGCG	1 cut(s)	832
BstKTI	GATC	9 cut(s)	130, 446, 524, 814, 1090, 1338, 1343, 1402, 1526
BstMAI	GTCTC	3 cut(s)	242, 641, 1507
BstMBI	GATC	9 cut(s)	127, 443, 521, 811, 1087, 1335, 1340, 1399, 1523
BstMWI	GCNNNNNNNGC	5 cut(s)	22, 302, 328, 968, 1412
BstNI	CCWGG	2 cut(s)	397, 1221
BstNSI	RCATGY	1 cut(s)	1033
BstPAI	GACNNNNGTC	2 cut(s)	33, 366
BstPI	GGTNACC	1 cut(s)	1272
BstSCI	CCNGG	2 cut(s)	395, 1219
BstSFI	CTRYAG	1 cut(s)	294
BstSLI	GKGCMC	2 cut(s)	823, 1464
BstSNI	TACGTA	1 cut(s)	265
BstUI	CGCG	1 cut(s)	832
BstV1I	GCAGC	3 cut(s)	28, 773, 1372
BstX2I	RGATCY	5 cut(s)	443, 1087, 1340, 1399, 1523
BstYI	RGATCY	5 cut(s)	443, 1087, 1340, 1399, 1523
BstZ17I	GTATAC	1 cut(s)	383
Bsu36I	CCTNAGG	1 cut(s)	1052
BsuI	GTATCC	2 cut(s)	934, 1202
BsuRI	GGCC	4 cut(s)	322, 400, 835, 1050
BtsCI	GGATG	1 cut(s)	912
BtsI	GCAGTG	1 cut(s)	1422
BtsIMutI	CAGTG	3 cut(s)	341, 1114, 1422
BveI	ACCTGC	1 cut(s)	1132
Cac8I	GCNNGC	3 cut(s)	218, 926, 1048
CaiI	CAGNNNCTG	2 cut(s)	22, 1255
CciI	TCATGA	2 cut(s)	325, 466
Cfr13I	GGNCC	2 cut(s)	320, 392
Csp6I	GTAC	2 cut(s)	372, 1058
CviQI	GTAC	2 cut(s)	372, 1058
DdeI	CTNAG	6 cut(s)	447, 691, 771, 1052, 1360, 1511
DpnI	GATC	9 cut(s)	129, 445, 523, 813, 1089, 1337, 1342, 1401, 1525
DpnII	GATC	9 cut(s)	127, 443, 521, 811, 1087, 1335, 1340, 1399, 1523
DraI	TTTAAA	1 cut(s)	288
DraIII	CACNNNGTG	1 cut(s)	1468
EaeI	YGGCCR	1 cut(s)	833
Eam1104I	CTCTTC	1 cut(s)	1514
EarI	CTCTTC	1 cut(s)	1514
EciI	GGCGGA	1 cut(s)	1455
Eco105I	TACGTA	1 cut(s)	265
Eco130I	CCWWGG	1 cut(s)	376
Eco147I	AGGCCT	2 cut(s)	400, 1050
Eco24I	GRGCYC	1 cut(s)	988
Eco31I	GGTCTC	1 cut(s)	641
Eco32I	GATATC	1 cut(s)	1261
Eco47I	GGWCC	1 cut(s)	392
Eco57I	CTGAAG	3 cut(s)	365, 933, 987
Eco81I	CCTNAGG	1 cut(s)	1052
Eco91I	GGTNACC	1 cut(s)	1272
EcoO65I	GGTNACC	1 cut(s)	1272
EcoRII	CCWGG	2 cut(s)	395, 1219
EcoRV	GATATC	1 cut(s)	1261
EcoT14I	CCWWGG	1 cut(s)	376
EcoT22I	ATGCAT	2 cut(s)	6, 573
EcoT38I	GRGCYC	1 cut(s)	988
ErhI	CCWWGG	1 cut(s)	376
Esp3I	CGTCTC	1 cut(s)	1507
FalI	AAGNNNNNCTT	2 cut(s)	1343, 1375
FaqI	GGGAC	2 cut(s)	378, 686
FblI	GTMKAC	1 cut(s)	382
Fnu4HI	GCNGC	4 cut(s)	17, 762, 833, 1386
FokI	GGATG	1 cut(s)	919
FriOI	GRGCYC	1 cut(s)	988
Fsp4HI	GCNGC	4 cut(s)	17, 762, 833, 1386
FspBI	CTAG	3 cut(s)	846, 890, 1481
GluI	GCNGC	4 cut(s)	17, 762, 833, 1386
GsaI	CCCAGC	2 cut(s)	521, 1199
GsuI	CTGGAG	1 cut(s)	702
HaeIII	GGCC	4 cut(s)	322, 400, 835, 1050
HapII	CCGG	1 cut(s)	1428
HincII	GTYRAC	1 cut(s)	828
HindII	GTYRAC	1 cut(s)	828
HindIII	AAGCTT	1 cut(s)	926
HpaII	CCGG	1 cut(s)	1428
HphI	GGTGA	4 cut(s)	176, 623, 1180, 1376
Hpy166II	GTNNAC	4 cut(s)	383, 821, 828, 1462
Hpy188I	TCNGA	9 cut(s)	443, 448, 714, 793, 871, 955, 967, 1153, 1340
Hpy8I	GTNNAC	4 cut(s)	383, 821, 828, 1462
HpyAV	CCTTC	4 cut(s)	626, 788, 1101, 1127
HpyCH4III	ACNGT	5 cut(s)	387, 489, 825, 1109, 1411
HpyCH4IV	ACGT	1 cut(s)	264
HpyF10VI	GCNNNNNNNGC	5 cut(s)	22, 302, 328, 968, 1412
HpyF3I	CTNAG	6 cut(s)	447, 691, 771, 1052, 1360, 1511
HpySE526I	ACGT	1 cut(s)	264
KpnI	GGTACC	1 cut(s)	1061
Kzo9I	GATC	9 cut(s)	127, 443, 521, 811, 1087, 1335, 1340, 1399, 1523
LmnI	GCTCC	2 cut(s)	338, 1442
Lsp1109I	GCAGC	3 cut(s)	28, 773, 1372
LweI	GCATC	5 cut(s)	77, 897, 1165, 1474, 1492
MaeI	CTAG	3 cut(s)	846, 890, 1481
MaeII	ACGT	1 cut(s)	264
MaeIII	GTNAC	5 cut(s)	164, 265, 307, 1272, 1420
MalI	GATC	9 cut(s)	129, 445, 523, 813, 1089, 1337, 1342, 1401, 1525
MbiI	CCGCTC	1 cut(s)	305
MboI	GATC	9 cut(s)	127, 443, 521, 811, 1087, 1335, 1340, 1399, 1523
MboII	GAAGA	3 cut(s)	358, 1335, 1531
MflI	RGATCY	5 cut(s)	443, 1087, 1340, 1399, 1523
MhlI	GDGCHC	4 cut(s)	343, 823, 988, 1464
MluCI	AATT	8 cut(s)	178, 351, 474, 743, 849, 1224, 1293, 1355
MlyI	GAGTC	5 cut(s)	447, 599, 709, 758, 1016
MmeI	TCCRAC	1 cut(s)	999
Mph1103I	ATGCAT	2 cut(s)	6, 573
MroXI	GAANNNNTTC	1 cut(s)	1116
MseI	TTAA	6 cut(s)	41, 287, 434, 708, 1035, 1265
MslI	CAYNNNNRTG	2 cut(s)	576, 1070
MspA1I	CMGCKG	1 cut(s)	764
MspI	CCGG	1 cut(s)	1428
MspR9I	CCNGG	2 cut(s)	397, 1221
Mva1269I	GAATGC	2 cut(s)	556, 571
MvaI	CCWGG	2 cut(s)	397, 1221
MvnI	CGCG	1 cut(s)	832
MwoI	GCNNNNNNNGC	5 cut(s)	22, 302, 328, 968, 1412
NdeII	GATC	9 cut(s)	127, 443, 521, 811, 1087, 1335, 1340, 1399, 1523
NlaIV	GGNNCC	5 cut(s)	49, 394, 1059, 1089, 1401
NmuCI	GTSAC	2 cut(s)	164, 1420
NsiI	ATGCAT	2 cut(s)	6, 573
NspI	RCATGY	1 cut(s)	1033
PagI	TCATGA	2 cut(s)	325, 466
PceI	AGGCCT	2 cut(s)	400, 1050
PctI	GAATGC	2 cut(s)	556, 571
PdmI	GAANNNNTTC	1 cut(s)	1116
PfeI	GAWTC	5 cut(s)	451, 614, 702, 866, 1252
PkrI	GCNGC	4 cut(s)	18, 763, 834, 1387
PleI	GAGTC	5 cut(s)	446, 598, 709, 757, 1016
PpsI	GAGTC	5 cut(s)	446, 598, 709, 757, 1016
Ppu21I	YACGTR	1 cut(s)	265
PshAI	GACNNNNGTC	2 cut(s)	33, 366
Psp6I	CCWGG	2 cut(s)	395, 1219
PspEI	GGTNACC	1 cut(s)	1272
PspFI	CCCAGC	2 cut(s)	517, 1195
PspGI	CCWGG	2 cut(s)	395, 1219
PspN4I	GGNNCC	5 cut(s)	49, 394, 1059, 1089, 1401
PspPI	GGNCC	2 cut(s)	320, 392
PstI	CTGCAG	1 cut(s)	298
PstNI	CAGNNNCTG	2 cut(s)	22, 1255
PsuI	RGATCY	5 cut(s)	443, 1087, 1340, 1399, 1523
RsaI	GTAC	2 cut(s)	373, 1059
RsaNI	GTAC	2 cut(s)	372, 1058
RseI	CAYNNNNRTG	2 cut(s)	576, 1070
SaqAI	TTAA	6 cut(s)	41, 287, 434, 708, 1035, 1265
SatI	GCNGC	4 cut(s)	17, 762, 833, 1386
Sau3AI	GATC	9 cut(s)	127, 443, 521, 811, 1087, 1335, 1340, 1399, 1523
Sau96I	GGNCC	2 cut(s)	320, 392
SchI	GAGTC	5 cut(s)	447, 599, 709, 758, 1016
ScrFI	CCNGG	2 cut(s)	397, 1221
SduI	GDGCHC	4 cut(s)	343, 823, 988, 1464
SfaNI	GCATC	5 cut(s)	77, 897, 1165, 1474, 1492
SfcI	CTRYAG	1 cut(s)	294
SinI	GGWCC	1 cut(s)	392
SmiMI	CAYNNNNRTG	2 cut(s)	576, 1070
SmlI	CTYRAG	2 cut(s)	123, 638
SmoI	CTYRAG	2 cut(s)	123, 638
SnaBI	TACGTA	1 cut(s)	265
Sse9I	AATT	8 cut(s)	178, 351, 474, 743, 849, 1224, 1293, 1355
SseBI	AGGCCT	2 cut(s)	400, 1050
SsiI	CCGC	5 cut(s)	305, 609, 764, 832, 1440
SspI	AATATT	1 cut(s)	1282
SspMI	CTAG	3 cut(s)	846, 890, 1481
StuI	AGGCCT	2 cut(s)	400, 1050
StyD4I	CCNGG	2 cut(s)	395, 1219
StyI	CCWWGG	1 cut(s)	376
TaaI	ACNGT	5 cut(s)	387, 489, 825, 1109, 1411
TaiI	ACGT	1 cut(s)	267
TaqI	TCGA	3 cut(s)	37, 778, 1346
TasI	AATT	8 cut(s)	178, 351, 474, 743, 849, 1224, 1293, 1355
TauI	GCSGC	1 cut(s)	835
TfiI	GAWTC	5 cut(s)	451, 614, 702, 866, 1252
Tru1I	TTAA	6 cut(s)	41, 287, 434, 708, 1035, 1265
Tru9I	TTAA	6 cut(s)	41, 287, 434, 708, 1035, 1265
TscAI	CASTG	3 cut(s)	348, 1114, 1429
TseFI	GTSAC	2 cut(s)	164, 1420
TseI	GCWGC	3 cut(s)	16, 761, 1385
Tsp45I	GTSAC	2 cut(s)	164, 1420
TspDTI	ATGAA	5 cut(s)	107, 201, 218, 483, 698
TspGWI	ACGGA	1 cut(s)	1531
TspRI	CASTG	3 cut(s)	348, 1114, 1429
VneI	GTGCAC	2 cut(s)	819, 1460
VpaK11BI	GGWCC	1 cut(s)	392
XapI	RAATTY	4 cut(s)	474, 743, 849, 1355
XbaI	TCTAGA	2 cut(s)	845, 1480
XceI	RCATGY	1 cut(s)	1033
XmiI	GTMKAC	1 cut(s)	382
XmnI	GAANNNNTTC	1 cut(s)	1116
XspI	CTAG	3 cut(s)	846, 890, 1481
Zsp2I	ATGCAT	2 cut(s)	6, 573

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.