Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0010153

Physical Location & Seq

Genomic Coordinates Reverse (-)

15828338 .. 15839243

Gene Structure 10906 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g12150.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1884 bp

ATGGAGTACGACGCCGATGACATTTTCCGAGACGATGAAGACGACTCAGACAACGAGTTCTATCAGGAAAGGGCATCGACCAAGGAGCTCGTGGTCTACCTCGTCGACGCTTCCCCCAAAATGTTCAGCACTACTTCTCCGGCCGAAGACGGGGAGGATGTGACTGATTTTCATGTTGCTATGAGTTGTATCTCGGAGTCTCTGAGGAAGCAGATTATTAATTCTTCGTATGATGAAGTTGCTGTATGCTTCTTTAATACTAGGGAAAAGAGAAACTTGCAAGATTTAAATGGTGTTTATGTGTTTAATGTTGATGAGCGAGATAATCTGGACAGGCCAACAGCAAGGCTGATAAAAGAAGTTAGTAATGTAGAAGAATCATTTATGAGCAATATTGGGAGTCAGTATGGTATTAATTCTGGGTCTCGTGAAAATTCTCTTTACAATGCTCTTTGGGTAGCTCAAGCACTGCTGCATAAAGGATCTGCGAGGACAGCTGATAAGCGGGTTCTTTTATTTACAAATGAGGATGATCCATTTGGCAGCATTAAAGGAATCATAAAGACAGACATGATGAGAACCACATTGCAGCGGGCTAAAGATGCACAAGATCTTGGCATTTCAATTGAGCTTCTTCCATTGTGTCATTCAGATAATGAATTTAACGTTTCAACTTTCTACTCTGATTTAATTGGACTTACTGGTGATGAACTTGCTCAATTCATGCCAAAAGTGGGAGAAAAATTGGAAGATATGAAGGACCAGCTAAGAAGGCGAATGTTCAAGAAACGTATTGTTAGAAAAATCACTTTCTCTATTGCCAATGGGCTTTCAATTCAACTCAGTTCATATGCTTTAGTCCGTCCCACTAATCCAGGAGCAATCACCTGGCTTGATTCGGTCACTAACCGTCCTTTAAAGGGAGAAAGATCTTTAATTTGTACTGATACTGGTGCACTGGTACAGGCATCTGTACAACGGGTTCAACCCTATAAAAATGAAAATATCAAGTTCTCAGTGGAGGAACTCTCAGAGATCAAAAGAATTTCTACTGGACAACTTCGACTCCTTGGCTTCAAGCCCTTAAATTGCTTGAAAGAGTTCCATAATTTGAGGCCTTCAACCTTTGTGTTCCCTAGTGATCAGGAACTAATGGGCAGCACATGTGTTTTCATTGCACTACATAAATCCATGCTACGTCTAAAGCGTTTTGCAGTTGCATTTTACGGCAGTTCATCTCGCCCTCAACTGGTTGCTCTTGTTGCTCAAGAGGAGATAGTCAGTGCAGGTGGTCAGGTTGAGCCTCCGGGGATGCACATGATATATCTTCCATATTCTGATGACATTAGACACGCTGAAGAGCTTCTTATGGGTTCATATGCTGCAGCACCTCATGCAAGTGATGATCAAATTACAAAGGCTTCTGCTTTAATCAACCGTCTAGAGTTGAAAGATTTCTCAGTTTTCCAATTTTCTAACCCTGGCCTTCAGAGACATTATGCAATACTGCAGGCCTTAGCTCTGGACGAGGATGATATACCGGAAATTAAAGATGAAACTTTTCCTCCTGAGGAAGGCATGTCTAGACCAGCAGTTGTTAGAGTAGTAGAAGAATTCAAGCATTCCGTTTATGGAGAAAATTATGATGAGGAAACTGACGTTGCAAATGCTAAAGCAAGTGAGACCACCAAAAAGCGAAAAGCAGCCGCAGAAAATGCAGTTAAGGAGATTGCTAAGCATGACTGGGCTGACCTTGCAGATAATGGAAAGTTGAAGAATTTGACAGTCATGGACTTGAAGTGCTATTTGACAGCAAATAATCTTCCAGTAGCTGGGAAGAAGGAAGCATTGATCAGTCGAATATTGACTCACATGGGAAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000723 GO:0000726 GO:0000781 GO:0000784 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006303 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0008150 GO:0008152 GO:0009266 GO:0009408 GO:0009628 GO:0009987 GO:0016043 GO:0031974 GO:0031981 GO:0032200 GO:0033554 GO:0034641 GO:0042162 GO:0042592 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043565 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0046483 GO:0050896 GO:0051276 GO:0051716 GO:0060249 GO:0065007 GO:0065008 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:0098687 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko03450 map03450

Pfam Domains

Protein Families

Ku Ku_C Ku_N SAP

Protein Analysis

628

Amino Acids

70.46

Weight (kDa)

5.27

Isoelectric Point (pI)

46.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ku_N	PF03731	31 - 265	3.9e-54	Ku70/Ku80 N-terminal alpha/beta domain
Ku	PF02735	274 - 471	2.2e-36	Ku70/Ku80 beta-barrel domain
Ku_C	PF03730	486 - 528	3e-11	Ku70/Ku80 C-terminal arm

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0010153)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G16970
fragaria_vesca	FvH4_4g12150 FvH4_4g12150 FvH4_4g12150 FvH4_4g12150
malus_domestica	MD13G1278700.v1.1
prunus_persica	Prupe.1G178000_v2.0.a1 Prupe.1G178000_v2.0.a1
pyrus_communis	pycom13g29490
rosa_chinensis	RchiOBHm_Chr4g0409801
rosa_laevigata	RLG00000008521
rosa_multiflora	Rmu_sc0019800.1_g000001 Rmu_sc0042987.1_g000001
rosa_roxburghii	Rroxscaffold_5G00354350
rosa_rugosa	Rorug04G0096600
rosa_samantha	Rh4AG158200 Rh4BG157900 Rh4CG168700 Rh4DG152800
rosa_wichuraiana	Rw0G017490 Rw4G013070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1277
Acc36I	ACCTGC	1 cut(s)	1277
AccB7I	CCANNNNNTGG	1 cut(s)	1832
AccI	GTMKAC	2 cut(s)	96, 105
AciI	CCGC	3 cut(s)	505, 592, 1707
AclI	AACGTT	1 cut(s)	666
AclWI	GGATC	2 cut(s)	490, 527
AcoI	YGGCCR	1 cut(s)	141
AcsI	RAATTY	5 cut(s)	433, 659, 1044, 1613, 1777
AcuI	CTGAAG	2 cut(s)	1377, 1472
AcyI	GRCGYC	1 cut(s)	12
AfaI	GTAC	4 cut(s)	8, 943, 963, 975
AfiI	CCNNNNNNNGG	6 cut(s)	150, 734, 920, 1249, 1574, 1832
AflIII	ACRYGT	1 cut(s)	1163
AjnI	CCWGG	3 cut(s)	874, 887, 1480
AluBI	AGCT	8 cut(s)	88, 461, 497, 631, 766, 1363, 1520, 1832
AluI	AGCT	8 cut(s)	88, 461, 497, 631, 766, 1363, 1520, 1832
Alw21I	GWGCWC	2 cut(s)	90, 958
Alw26I	GTCTC	5 cut(s)	24, 204, 429, 1486, 1676
Alw44I	GTGCAC	1 cut(s)	954
AlwI	GGATC	2 cut(s)	490, 527
AlwNI	CAGNNNCTG	1 cut(s)	1832
AoxI	GGCC	5 cut(s)	141, 335, 1115, 1483, 1512
ApaLI	GTGCAC	1 cut(s)	954
ApeKI	GCWGC	7 cut(s)	472, 543, 589, 1158, 1382, 1385, 1703
ApoI	RAATTY	5 cut(s)	433, 659, 1044, 1613, 1777
AseI	ATTAAT	2 cut(s)	219, 414
Asp700I	GAANNNNTTC	4 cut(s)	1100, 1362, 1454, 1560
AspS9I	GGNCC	1 cut(s)	760
AsuC2I	CCSGG	1 cut(s)	1308
AsuHPI	GGTGA	2 cut(s)	716, 877
AvaII	GGWCC	1 cut(s)	760
AxyI	CCTNAGG	1 cut(s)	1569
BaeGI	GKGCMC	1 cut(s)	958
BanII	GRGCYC	1 cut(s)	90
BauI	CACGAG	2 cut(s)	89, 426
BbsI	GAAGAC	2 cut(s)	45, 153
Bbv12I	GWGCWC	2 cut(s)	90, 958
BbvI	GCAGC	7 cut(s)	459, 555, 601, 1170, 1369, 1397, 1715
BceAI	ACGGC	1 cut(s)	1243
BciT130I	CCWGG	3 cut(s)	876, 889, 1482
BclI	TGATCA	3 cut(s)	1141, 1405, 1851
BcnI	CCSGG	1 cut(s)	1308
BcoDI	GTCTC	5 cut(s)	24, 204, 429, 1486, 1676
BfaI	CTAG	4 cut(s)	261, 1137, 1442, 1584
BfmI	CTRYAG	2 cut(s)	1383, 1508
BfuAI	ACCTGC	1 cut(s)	1277
BglII	AGATCT	2 cut(s)	610, 929
BisI	GCNGC	8 cut(s)	473, 544, 590, 1159, 1383, 1386, 1704, 1707
BlpI	GCTNAGC	1 cut(s)	1734
BlsI	GCNGC	8 cut(s)	474, 545, 591, 1160, 1384, 1387, 1705, 1708
Bme1390I	CCNGG	4 cut(s)	876, 889, 1308, 1482
Bme18I	GGWCC	1 cut(s)	760
BmgT120I	GGNCC	1 cut(s)	760
BmrFI	CCNGG	4 cut(s)	876, 889, 1308, 1482
BmrI	ACTGGG	1 cut(s)	1753
BmsI	GCATC	4 cut(s)	83, 592, 977, 1302
BmuI	ACTGGG	1 cut(s)	1753
BpiI	GAAGAC	2 cut(s)	45, 153
BplI	GAGNNNNNCTC	2 cut(s)	1013, 1045
Bpu10I	CCTNAGC	1 cut(s)	1516
Bpu1102I	GCTNAGC	1 cut(s)	1734
BpuEI	CTTGAG	2 cut(s)	447, 1251
BpuMI	CCSGG	1 cut(s)	1308
BsaHI	GRCGYC	1 cut(s)	12
BsaI	GGTCTC	2 cut(s)	429, 1676
BsaJI	CCNNGG	4 cut(s)	81, 1069, 1307, 1480
BsaWI	WCCGGW	1 cut(s)	1540
BsaXI	ACNNNNNCTCC	6 cut(s)	121, 151, 1050, 1080, 1549, 1579
Bsc4I	CCNNNNNNNGG	6 cut(s)	150, 734, 920, 1249, 1574, 1832
Bse1I	ACTGG	7 cut(s)	706, 955, 963, 1057, 1254, 1748, 1826
Bse21I	CCTNAGG	1 cut(s)	1569
Bse3DI	GCAATG	2 cut(s)	584, 1173
BseBI	CCWGG	3 cut(s)	876, 889, 1482
BseDI	CCNNGG	4 cut(s)	81, 1069, 1307, 1480
BseGI	GGATG	4 cut(s)	163, 535, 1317, 1537
BseLI	CCNNNNNNNGG	6 cut(s)	150, 734, 920, 1249, 1574, 1832
BseMI	GCAATG	2 cut(s)	584, 1173
BseMII	CTCAG	7 cut(s)	60, 194, 856, 1029, 1044, 1473, 1560
BseNI	ACTGG	7 cut(s)	706, 955, 963, 1057, 1254, 1748, 1826
BseRI	GAGGAG	1 cut(s)	1286
BseSI	GKGCMC	1 cut(s)	958
BseX3I	CGGCCG	1 cut(s)	141
BseXI	GCAGC	7 cut(s)	459, 555, 601, 1170, 1369, 1397, 1715
BseYI	CCCAGC	1 cut(s)	1832
BsgI	GTGCAG	1 cut(s)	1305
Bsh1285I	CGRYCG	1 cut(s)	144
BshFI	GGCC	5 cut(s)	143, 337, 1117, 1485, 1514
BsiEI	CGRYCG	1 cut(s)	144
BsiHKAI	GWGCWC	2 cut(s)	90, 958
BsiSI	CCGG	3 cut(s)	140, 1307, 1541
BslFI	GGGAC	1 cut(s)	849
BslI	CCNNNNNNNGG	6 cut(s)	150, 734, 920, 1249, 1574, 1832
BsmAI	GTCTC	5 cut(s)	24, 204, 429, 1486, 1676
BsmBI	CGTCTC	1 cut(s)	24
BsmFI	GGGAC	1 cut(s)	849
BsmI	GAATGC	1 cut(s)	1621
BsnI	GGCC	5 cut(s)	143, 337, 1117, 1485, 1514
Bso31I	GGTCTC	2 cut(s)	429, 1676
Bsp1286I	GDGCHC	2 cut(s)	90, 958
Bsp1407I	TGTACA	1 cut(s)	973
Bsp143I	GATC	8 cut(s)	482, 532, 610, 929, 1035, 1141, 1405, 1851
Bsp1720I	GCTNAGC	1 cut(s)	1734
BspACI	CCGC	3 cut(s)	505, 592, 1707
BspANI	GGCC	5 cut(s)	143, 337, 1117, 1485, 1514
BspCNI	CTCAG	7 cut(s)	59, 195, 855, 1028, 1043, 1472, 1561
BspMAI	CTGCAG	2 cut(s)	1387, 1512
BspMI	ACCTGC	1 cut(s)	1277
BspPI	GGATC	2 cut(s)	490, 527
BspQI	GCTCTTC	1 cut(s)	1353
BspTNI	GGTCTC	2 cut(s)	429, 1676
BsrDI	GCAATG	2 cut(s)	584, 1173
BsrGI	TGTACA	1 cut(s)	973
BsrI	ACTGG	7 cut(s)	706, 955, 963, 1057, 1254, 1748, 1826
BssECI	CCNNGG	4 cut(s)	81, 1069, 1307, 1480
BssMI	GATC	8 cut(s)	482, 532, 610, 929, 1035, 1141, 1405, 1851
BssNI	GRCGYC	1 cut(s)	12
BssSI	CACGAG	2 cut(s)	89, 426
BssT1I	CCWWGG	2 cut(s)	81, 1069
Bst2BI	CACGAG	2 cut(s)	89, 426
Bst2UI	CCWGG	3 cut(s)	876, 889, 1482
Bst4CI	ACNGT	3 cut(s)	911, 1439, 1786
Bst6I	CTCTTC	1 cut(s)	1353
BstACI	GRCGYC	1 cut(s)	12
BstAPI	GCANNNNNTGC	2 cut(s)	1394, 1715
BstAUI	TGTACA	1 cut(s)	973
BstC8I	GCNNGC	2 cut(s)	594, 1512
BstENI	CCTNNNNNAGG	1 cut(s)	1572
BstF5I	GGATG	4 cut(s)	163, 535, 1317, 1537
BstKTI	GATC	8 cut(s)	485, 535, 613, 932, 1038, 1144, 1408, 1854
BstMAI	GTCTC	5 cut(s)	24, 204, 429, 1486, 1676
BstMBI	GATC	8 cut(s)	482, 532, 610, 929, 1035, 1141, 1405, 1851
BstMCI	CGRYCG	1 cut(s)	144
BstMWI	GCNNNNNNNGC	7 cut(s)	494, 602, 772, 1262, 1394, 1715, 1754
BstNI	CCWGG	3 cut(s)	876, 889, 1482
BstNSI	RCATGY	2 cut(s)	1167, 1582
BstSCI	CCNGG	4 cut(s)	874, 887, 1306, 1480
BstSFI	CTRYAG	2 cut(s)	1383, 1508
BstSLI	GKGCMC	1 cut(s)	958
BstV1I	GCAGC	7 cut(s)	459, 555, 601, 1170, 1369, 1397, 1715
BstV2I	GAAGAC	2 cut(s)	45, 153
BstX2I	RGATCY	3 cut(s)	482, 610, 929
BstYI	RGATCY	3 cut(s)	482, 610, 929
BstZI	CGGCCG	1 cut(s)	141
Bsu36I	CCTNAGG	1 cut(s)	1569
BsuRI	GGCC	5 cut(s)	143, 337, 1117, 1485, 1514
BtsCI	GGATG	4 cut(s)	163, 535, 1317, 1537
BtsI	GCAGTG	1 cut(s)	467
BtsIMutI	CAGTG	4 cut(s)	467, 956, 1023, 1288
BveI	ACCTGC	1 cut(s)	1277
Cac8I	GCNNGC	2 cut(s)	594, 1512
CaiI	CAGNNNCTG	1 cut(s)	1832
Cfr13I	GGNCC	1 cut(s)	760
CseI	GACGC	2 cut(s)	20, 116
Csp6I	GTAC	4 cut(s)	7, 942, 962, 974
CviQI	GTAC	4 cut(s)	7, 942, 962, 974
DpnI	GATC	8 cut(s)	484, 534, 612, 931, 1037, 1143, 1407, 1853
DpnII	GATC	8 cut(s)	482, 532, 610, 929, 1035, 1141, 1405, 1851
DraI	TTTAAA	2 cut(s)	288, 918
EaeI	YGGCCR	1 cut(s)	141
EagI	CGGCCG	1 cut(s)	141
Eam1104I	CTCTTC	1 cut(s)	1353
EarI	CTCTTC	1 cut(s)	1353
Ecl136II	GAGCTC	1 cut(s)	88
EclXI	CGGCCG	1 cut(s)	141
Eco130I	CCWWGG	2 cut(s)	81, 1069
Eco147I	AGGCCT	2 cut(s)	1117, 1514
Eco24I	GRGCYC	1 cut(s)	90
Eco31I	GGTCTC	2 cut(s)	429, 1676
Eco47I	GGWCC	1 cut(s)	760
Eco52I	CGGCCG	1 cut(s)	141
Eco53kI	GAGCTC	1 cut(s)	88
Eco57I	CTGAAG	2 cut(s)	1377, 1472
Eco81I	CCTNAGG	1 cut(s)	1569
EcoICRI	GAGCTC	1 cut(s)	88
EcoNI	CCTNNNNNAGG	1 cut(s)	1572
EcoRI	GAATTC	1 cut(s)	1613
EcoRII	CCWGG	3 cut(s)	874, 887, 1480
EcoT14I	CCWWGG	2 cut(s)	81, 1069
EcoT38I	GRGCYC	1 cut(s)	90
ErhI	CCWWGG	2 cut(s)	81, 1069
Esp3I	CGTCTC	1 cut(s)	24
FalI	AAGNNNNNCTT	4 cut(s)	260, 292, 1350, 1382
FaqI	GGGAC	1 cut(s)	849
FauI	CCCGC	2 cut(s)	498, 585
FauNDI	CATATG	2 cut(s)	850, 1378
FbaI	TGATCA	3 cut(s)	1141, 1405, 1851
FblI	GTMKAC	2 cut(s)	96, 105
Fnu4HI	GCNGC	8 cut(s)	473, 544, 590, 1159, 1383, 1386, 1704, 1707
FokI	GGATG	4 cut(s)	170, 542, 1324, 1544
FriOI	GRGCYC	1 cut(s)	90
Fsp4HI	GCNGC	8 cut(s)	473, 544, 590, 1159, 1383, 1386, 1704, 1707
FspBI	CTAG	4 cut(s)	261, 1137, 1442, 1584
GluI	GCNGC	8 cut(s)	473, 544, 590, 1159, 1383, 1386, 1704, 1707
GsaI	CCCAGC	1 cut(s)	1836
HaeIII	GGCC	5 cut(s)	143, 337, 1117, 1485, 1514
HapII	CCGG	3 cut(s)	140, 1307, 1541
HgaI	GACGC	2 cut(s)	20, 116
Hin1I	GRCGYC	1 cut(s)	12
HincII	GTYRAC	1 cut(s)	106
HindII	GTYRAC	1 cut(s)	106
HinfI	GANTC	8 cut(s)	44, 197, 377, 400, 555, 896, 1065, 1867
HpaII	CCGG	3 cut(s)	140, 1307, 1541
HphI	GGTGA	2 cut(s)	716, 877
Hpy166II	GTNNAC	3 cut(s)	97, 106, 956
Hpy188I	TCNGA	9 cut(s)	29, 49, 196, 204, 652, 685, 1033, 1339, 1491
Hpy8I	GTNNAC	3 cut(s)	97, 106, 956
Hpy99I	CGWCG	3 cut(s)	14, 107, 110
HpyAV	CCTTC	6 cut(s)	751, 765, 1128, 1496, 1568, 1834
HpyCH4III	ACNGT	3 cut(s)	911, 1439, 1786
HpyCH4IV	ACGT	4 cut(s)	666, 790, 1198, 1659
HpyF10VI	GCNNNNNNNGC	7 cut(s)	494, 602, 772, 1262, 1394, 1715, 1754
HpySE526I	ACGT	4 cut(s)	666, 790, 1198, 1659
Hsp92I	GRCGYC	1 cut(s)	12
Ksp22I	TGATCA	3 cut(s)	1141, 1405, 1851
Kzo9I	GATC	8 cut(s)	482, 532, 610, 929, 1035, 1141, 1405, 1851
LguI	GCTCTTC	1 cut(s)	1353
LmnI	GCTCC	2 cut(s)	85, 878
Lsp1109I	GCAGC	7 cut(s)	459, 555, 601, 1170, 1369, 1397, 1715
LweI	GCATC	4 cut(s)	83, 592, 977, 1302
MaeI	CTAG	4 cut(s)	261, 1137, 1442, 1584
MaeII	ACGT	4 cut(s)	666, 790, 1198, 1659
MaeIII	GTNAC	2 cut(s)	160, 901
MalI	GATC	8 cut(s)	484, 534, 612, 931, 1037, 1143, 1407, 1853
MboI	GATC	8 cut(s)	482, 532, 610, 929, 1035, 1141, 1405, 1851
MfeI	CAATTG	1 cut(s)	624
MflI	RGATCY	3 cut(s)	482, 610, 929
MhlI	GDGCHC	2 cut(s)	90, 958
MlyI	GAGTC	5 cut(s)	38, 206, 409, 1059, 1861
MroXI	GAANNNNTTC	4 cut(s)	1100, 1362, 1454, 1560
MslI	CAYNNNNRTG	1 cut(s)	1398
MspA1I	CMGCKG	2 cut(s)	497, 592
MspI	CCGG	3 cut(s)	140, 1307, 1541
MspR9I	CCNGG	4 cut(s)	876, 889, 1308, 1482
MunI	CAATTG	1 cut(s)	624
Mva1269I	GAATGC	1 cut(s)	1621
MvaI	CCWGG	3 cut(s)	876, 889, 1482
MwoI	GCNNNNNNNGC	7 cut(s)	494, 602, 772, 1262, 1394, 1715, 1754
NciI	CCSGG	1 cut(s)	1308
NdeI	CATATG	2 cut(s)	850, 1378
NdeII	GATC	8 cut(s)	482, 532, 610, 929, 1035, 1141, 1405, 1851
NmuCI	GTSAC	2 cut(s)	160, 901
NspI	RCATGY	2 cut(s)	1167, 1582
PaqCI	CACCTGC	1 cut(s)	1277
PceI	AGGCCT	2 cut(s)	1117, 1514
PciI	ACATGT	1 cut(s)	1163
PciSI	GCTCTTC	1 cut(s)	1353
PcsI	WCGNNNNNNNCGW	2 cut(s)	39, 1204
PctI	GAATGC	1 cut(s)	1621
PdmI	GAANNNNTTC	4 cut(s)	1100, 1362, 1454, 1560
PfeI	GAWTC	3 cut(s)	377, 555, 896
PflMI	CCANNNNNTGG	1 cut(s)	1832
PfoI	TCCNGGA	1 cut(s)	874
PkrI	GCNGC	8 cut(s)	474, 545, 591, 1160, 1384, 1387, 1705, 1708
PleI	GAGTC	5 cut(s)	38, 205, 408, 1059, 1861
PpsI	GAGTC	5 cut(s)	38, 205, 408, 1059, 1861
PscI	ACATGT	1 cut(s)	1163
PshBI	ATTAAT	2 cut(s)	219, 414
Psp124BI	GAGCTC	1 cut(s)	90
Psp1406I	AACGTT	1 cut(s)	666
Psp6I	CCWGG	3 cut(s)	874, 887, 1480
PspFI	CCCAGC	1 cut(s)	1832
PspGI	CCWGG	3 cut(s)	874, 887, 1480
PspPI	GGNCC	1 cut(s)	760
PsrI	GAACNNNNNNTAC	2 cut(s)	966, 998
PstI	CTGCAG	2 cut(s)	1387, 1512
PstNI	CAGNNNCTG	1 cut(s)	1832
PsuI	RGATCY	3 cut(s)	482, 610, 929
PvuII	CAGCTG	1 cut(s)	497
RsaI	GTAC	4 cut(s)	8, 943, 963, 975
RsaNI	GTAC	4 cut(s)	7, 942, 962, 974
RseI	CAYNNNNRTG	1 cut(s)	1398
SacI	GAGCTC	1 cut(s)	90
SalI	GTCGAC	1 cut(s)	104
SapI	GCTCTTC	1 cut(s)	1353
SatI	GCNGC	8 cut(s)	473, 544, 590, 1159, 1383, 1386, 1704, 1707
Sau3AI	GATC	8 cut(s)	482, 532, 610, 929, 1035, 1141, 1405, 1851
Sau96I	GGNCC	1 cut(s)	760
SchI	GAGTC	5 cut(s)	38, 206, 409, 1059, 1861
ScrFI	CCNGG	4 cut(s)	876, 889, 1308, 1482
SduI	GDGCHC	2 cut(s)	90, 958
SfaNI	GCATC	4 cut(s)	83, 592, 977, 1302
SfcI	CTRYAG	2 cut(s)	1383, 1508
SgrDI	CGTCGACG	1 cut(s)	104
SinI	GGWCC	1 cut(s)	760
SmiI	ATTTAAAT	1 cut(s)	288
SmiMI	CAYNNNNRTG	1 cut(s)	1398
SmlI	CTYRAG	2 cut(s)	462, 1266
SmoI	CTYRAG	2 cut(s)	462, 1266
SseBI	AGGCCT	2 cut(s)	1117, 1514
SsiI	CCGC	3 cut(s)	505, 592, 1707
SspI	AATATT	2 cut(s)	394, 1863
SspMI	CTAG	4 cut(s)	261, 1137, 1442, 1584
SstI	GAGCTC	1 cut(s)	90
StuI	AGGCCT	2 cut(s)	1117, 1514
StyD4I	CCNGG	4 cut(s)	874, 887, 1306, 1480
StyI	CCWWGG	2 cut(s)	81, 1069
SwaI	ATTTAAAT	1 cut(s)	288
TaaI	ACNGT	3 cut(s)	911, 1439, 1786
TaiI	ACGT	4 cut(s)	669, 793, 1201, 1662
TaqI	TCGA	4 cut(s)	77, 105, 1063, 1858
TaqII	GACCGA	1 cut(s)	889
TatI	WGTACW	2 cut(s)	941, 973
TauI	GCSGC	1 cut(s)	1709
TfiI	GAWTC	3 cut(s)	377, 555, 896
TscAI	CASTG	4 cut(s)	474, 963, 1023, 1288
TseFI	GTSAC	2 cut(s)	160, 901
TseI	GCWGC	7 cut(s)	472, 543, 589, 1158, 1382, 1385, 1703
Tsp45I	GTSAC	2 cut(s)	160, 901
TspGWI	ACGGA	2 cut(s)	851, 1615
TspRI	CASTG	4 cut(s)	474, 963, 1023, 1288
Van91I	CCANNNNNTGG	1 cut(s)	1832
VneI	GTGCAC	1 cut(s)	954
VpaK11BI	GGWCC	1 cut(s)	760
VspI	ATTAAT	2 cut(s)	219, 414
XagI	CCTNNNNNAGG	1 cut(s)	1572
XapI	RAATTY	5 cut(s)	433, 659, 1044, 1613, 1777
XbaI	TCTAGA	2 cut(s)	1441, 1583
XceI	RCATGY	2 cut(s)	1167, 1582
XcmI	CCANNNNNNNNNTGG	1 cut(s)	88
XmiI	GTMKAC	2 cut(s)	96, 105
XmnI	GAANNNNTTC	4 cut(s)	1100, 1362, 1454, 1560
XspI	CTAG	4 cut(s)	261, 1137, 1442, 1584

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.