Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr4

Orthogroup ID

OG0010153

Physical Location & Seq

Genomic Coordinates Reverse (-)

30571365 .. 30582666

Gene Structure 11302 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw4G013070.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1884 bp

ATGGAATTTGACGCCGATGACATTTTCAGAGACGACGAAGACGACCCAGACAATGAACTCTATCAGGAAAGGGAATCCACCAAGGACCTCGTCGTCTACCTCGTTGATGCTTCCCCTAAAATGTTCTCCACCACTACTCCAGCCGGAGACGGGAAGGATGAAACTCACTTTCATGTTGCTATCAGCTGTATCTCCGAGTCTCTCAGGAAACAAATCATTAATGCCTCCTACGATGAAGTTGCCATATGCTTCTTCAATACCAGGGAAAAGAGAAACTTGCAAGATTTAAATGGTGTTTATGTGTTTAATGTTACTGAGCGAGAGTATCTGGACAGGCCAACAGCAAGGCTGATAAAAGAAGTTAGTAATGTAGAAGAGTCATTTATGAGCAAAATTGGGAGTCAGTATGGTATTAACTCTGGGTCTCGAGAAAATTCTCTTTACAATGCCCTTTGGGTAGCCCAAGCACTTCTGCGTAAAGGATCTGCGAGGACAGCCGATAAGCGTGTTCTTTTATTTACAAATGAAGATGATCCATTTGGCAGCATTAAAGGAATCATAAAGACAGACATGATTAGAACCACATTGCAGCGGGCTAAAGATGCACAAGATCTTGGCATCTCAATTGAACTTCTTCCATTGTGTCACCCAGACAATGATTTCAATGTTTCGACTTTCTACTCCGATTTAGTTGGACTCACAGGTGATGAACTTGCTCAATTTATGCCAAAAGCGGGAGAAAAATTGGAAGATATGAAGGATCAGCTAAGAAAGCGAATGTTCAAGAAACGGATTGTTAGAAAAATCACTTTCTCAATTGCCAATGGACTTTCAATTCAACTCAGTTCATATGCTCTAATCCGTCCCACTGTTCCAGGAGCAATCACCTGGCTTGATTCGGTCACTAACCGTCCTTTGAAGGCCGAAAGATCTTTTGTTTGTGCTGATACTGGTGCACTGGTACAGGAATCTGTAAAACGGTTTCAACCCTACAAAACCGAAGATATCAAGTTCTCAGTGGAGGAACTTTCAGAGATCAAAAGAATTTCTACCGGACAACTTCGACTCCTTGGCTTCAAGCCTTTAAATTGCTTGAAAGACTATCACAACTTGAGGCCCTCGACCTTTGTGTTCCCTAGTGATCAGGAACTGATTGGTAGCACACGTGTTTTCATTGCACTACATAAATCCATGCTACGGCTAAAGCGTTTCGCAGTTGCATTTTATGGTAGTTCATCTCGTCCTCAACTGGTTGCTCTTGTTGCTCAAGATGAAATAATGAGTGCTGGTGGTCAGGTTGAGCCTCCAGGGATGCACATGATATATCTTCCATATTCCGATGACATTAGACACACTGAAGAGCTTCTTATGGGTTCAGATGCTGCAGCGTCTCATGCAAGTGATGATCAAATTAGCAAAGCTGCTGCTTTAATCAATCGTCTAGACTTGAAAGATTTCTCAGTTTTCCAATTTTCTAACCCTGCCCTGCAGAGACACTATGCAGTATTGCAGGCCCTGGCTCTGGATGAGGATGATATACCGGAAATTAAAGATGAAACTTTACCTGATGAGGAAGGCATGTCTAGACCAGGAGTTGTTAGAACAATAGAAGAATTCAAGCATTCCGTTTATGGAGAAAATTATGATGAGGAAAGTGAAGTTGGAAATGCCAAAGTAAGTGAGACCACCAAAAAGCGAAAAGCAGCTGCTGAAAATGCAGTTAAAGAGATTTCTAAGCATGACTGGGCTGACCTTGCCGATAACGGAAAGTTAAAGAATTTGACTGTTATGGACTTGAAGTGCTATTTGACAGCAAATAATCTTCCAGTAGCTGGGAAGAAGGAAGCATTGATCAGTCGAATATTGACTCACATGGGGAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000723 GO:0000726 GO:0000781 GO:0000784 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006303 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0008150 GO:0008152 GO:0009266 GO:0009408 GO:0009628 GO:0009987 GO:0016043 GO:0031974 GO:0031981 GO:0032200 GO:0033554 GO:0034641 GO:0042162 GO:0042592 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043565 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0046483 GO:0050896 GO:0051276 GO:0051716 GO:0060249 GO:0065007 GO:0065008 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:0098687 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko03450 map03450

Pfam Domains

Protein Families

Ku Ku_C Ku_N SAP

Protein Analysis

627

Amino Acids

70.52

Weight (kDa)

5.41

Isoelectric Point (pI)

43.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ku_N	PF03731	31 - 265	5e-52	Ku70/Ku80 N-terminal alpha/beta domain
Ku	PF02735	274 - 472	1.3e-37	Ku70/Ku80 beta-barrel domain
Ku_C	PF03730	486 - 567	8.1e-20	Ku70/Ku80 C-terminal arm
SAP	PF02037	591 - 624	7.8e-06	SAP domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010153)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G16970
fragaria_vesca	FvH4_4g12150 FvH4_4g12150 FvH4_4g12150 FvH4_4g12150
malus_domestica	MD13G1278700.v1.1
prunus_persica	Prupe.1G178000_v2.0.a1 Prupe.1G178000_v2.0.a1
pyrus_communis	pycom13g29490
rosa_chinensis	RchiOBHm_Chr4g0409801
rosa_laevigata	RLG00000008521
rosa_multiflora	Rmu_sc0019800.1_g000001 Rmu_sc0042987.1_g000001
rosa_roxburghii	Rroxscaffold_5G00354350
rosa_rugosa	Rorug04G0096600
rosa_samantha	Rh4AG158200 Rh4BG157900 Rh4CG168700 Rh4DG152800
rosa_wichuraiana	Rw0G017490 Rw4G013070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	92
AccB7I	CCANNNNNTGG	1 cut(s)	1832
AccI	GTMKAC	1 cut(s)	96
AciI	CCGC	2 cut(s)	592, 734
AclWI	GGATC	3 cut(s)	490, 527, 768
AcsI	RAATTY	5 cut(s)	5, 433, 1044, 1613, 1777
AcuI	CTGAAG	1 cut(s)	1377
AcvI	CACGTG	1 cut(s)	1166
AcyI	GRCGYC	1 cut(s)	12
AfaI	GTAC	1 cut(s)	963
AfiI	CCNNNNNNNGG	5 cut(s)	150, 734, 1197, 1522, 1832
AflIII	ACRYGT	2 cut(s)	1163, 1165
AjnI	CCWGG	6 cut(s)	260, 874, 887, 1306, 1515, 1588
AjuI	GAANNNNNNNTTGG	2 cut(s)	1644, 1676
AluBI	AGCT	6 cut(s)	186, 766, 1363, 1421, 1706, 1832
AluI	AGCT	6 cut(s)	186, 766, 1363, 1421, 1706, 1832
Alw21I	GWGCWC	1 cut(s)	958
Alw26I	GTCTC	7 cut(s)	24, 141, 204, 429, 1395, 1486, 1676
Alw44I	GTGCAC	1 cut(s)	954
AlwI	GGATC	3 cut(s)	490, 527, 768
AlwNI	CAGNNNCTG	5 cut(s)	1150, 1382, 1516, 1709, 1832
Ama87I	CYCGRG	1 cut(s)	426
AoxI	GGCC	4 cut(s)	335, 921, 1115, 1512
ApaLI	GTGCAC	1 cut(s)	954
ApeKI	GCWGC	8 cut(s)	543, 589, 1382, 1385, 1421, 1424, 1703, 1706
ApoI	RAATTY	5 cut(s)	5, 433, 1044, 1613, 1777
AseI	ATTAAT	1 cut(s)	219
Asp700I	GAANNNNTTC	3 cut(s)	633, 1362, 1454
AspS9I	GGNCC	3 cut(s)	85, 1116, 1513
AsuHPI	GGTGA	3 cut(s)	638, 716, 877
AvaI	CYCGRG	1 cut(s)	426
AvaII	GGWCC	1 cut(s)	85
BaeGI	GKGCMC	1 cut(s)	958
BbrPI	CACGTG	1 cut(s)	1166
BbsI	GAAGAC	1 cut(s)	45
Bbv12I	GWGCWC	1 cut(s)	958
BbvI	GCAGC	8 cut(s)	555, 601, 1369, 1397, 1408, 1411, 1693, 1715
BceAI	ACGGC	1 cut(s)	1214
BcgI	CGANNNNNNTGC	2 cut(s)	221, 255
BciT130I	CCWGG	6 cut(s)	262, 876, 889, 1308, 1517, 1590
BclI	TGATCA	3 cut(s)	1141, 1405, 1851
BcoDI	GTCTC	7 cut(s)	24, 141, 204, 429, 1395, 1486, 1676
BfaI	CTAG	3 cut(s)	1137, 1442, 1584
BfmI	CTRYAG	2 cut(s)	1383, 1487
BglII	AGATCT	2 cut(s)	610, 929
BisI	GCNGC	8 cut(s)	544, 590, 1383, 1386, 1422, 1425, 1704, 1707
BlsI	GCNGC	8 cut(s)	545, 591, 1384, 1387, 1423, 1426, 1705, 1708
Bme1390I	CCNGG	6 cut(s)	262, 876, 889, 1308, 1517, 1590
Bme18I	GGWCC	1 cut(s)	85
BmeT110I	CYCGRG	1 cut(s)	426
BmgT120I	GGNCC	3 cut(s)	85, 1116, 1513
BmrFI	CCNGG	6 cut(s)	262, 876, 889, 1308, 1517, 1590
BmrI	ACTGGG	1 cut(s)	1753
BmsI	GCATC	5 cut(s)	97, 592, 627, 1302, 1369
BmuI	ACTGGG	1 cut(s)	1753
BpiI	GAAGAC	1 cut(s)	45
BpmI	CTGGAG	2 cut(s)	123, 1290
BpuEI	CTTGAG	2 cut(s)	1132, 1251
BsaAI	YACGTR	1 cut(s)	1166
BsaHI	GRCGYC	1 cut(s)	12
BsaI	GGTCTC	2 cut(s)	429, 1676
BsaJI	CCNNGG	5 cut(s)	81, 261, 1069, 1307, 1515
BsaWI	WCCGGW	2 cut(s)	1052, 1540
BsaXI	ACNNNNNCTCC	4 cut(s)	121, 151, 1050, 1080
Bsc4I	CCNNNNNNNGG	5 cut(s)	150, 734, 1197, 1522, 1832
Bse1I	ACTGG	5 cut(s)	955, 963, 1254, 1748, 1826
Bse3DI	GCAATG	2 cut(s)	584, 1173
BseBI	CCWGG	6 cut(s)	262, 876, 889, 1308, 1517, 1590
BseDI	CCNNGG	5 cut(s)	81, 261, 1069, 1307, 1515
BseGI	GGATG	4 cut(s)	163, 1317, 1531, 1537
BseLI	CCNNNNNNNGG	5 cut(s)	150, 734, 1197, 1522, 1832
BseMI	GCAATG	2 cut(s)	584, 1173
BseMII	CTCAG	5 cut(s)	217, 306, 856, 1029, 1473
BseNI	ACTGG	5 cut(s)	955, 963, 1254, 1748, 1826
BseSI	GKGCMC	1 cut(s)	958
BseXI	GCAGC	8 cut(s)	555, 601, 1369, 1397, 1408, 1411, 1693, 1715
BseYI	CCCAGC	1 cut(s)	1832
BshFI	GGCC	4 cut(s)	337, 923, 1117, 1514
BsiHKAI	GWGCWC	1 cut(s)	958
BsiHKCI	CYCGRG	1 cut(s)	426
BsiSI	CCGG	3 cut(s)	144, 1053, 1541
BslFI	GGGAC	1 cut(s)	849
BslI	CCNNNNNNNGG	5 cut(s)	150, 734, 1197, 1522, 1832
BsmAI	GTCTC	7 cut(s)	24, 141, 204, 429, 1395, 1486, 1676
BsmBI	CGTCTC	3 cut(s)	24, 141, 1395
BsmFI	GGGAC	1 cut(s)	849
BsmI	GAATGC	1 cut(s)	1621
BsnI	GGCC	4 cut(s)	337, 923, 1117, 1514
Bso31I	GGTCTC	2 cut(s)	429, 1676
BsoBI	CYCGRG	1 cut(s)	426
Bsp1286I	GDGCHC	1 cut(s)	958
Bsp143I	GATC	9 cut(s)	482, 532, 610, 760, 929, 1035, 1141, 1405, 1851
BspACI	CCGC	2 cut(s)	592, 734
BspANI	GGCC	4 cut(s)	337, 923, 1117, 1514
BspCNI	CTCAG	5 cut(s)	216, 307, 855, 1028, 1472
BspMAI	CTGCAG	2 cut(s)	1387, 1491
BspPI	GGATC	3 cut(s)	490, 527, 768
BspQI	GCTCTTC	1 cut(s)	1353
BspTNI	GGTCTC	2 cut(s)	429, 1676
BsrDI	GCAATG	2 cut(s)	584, 1173
BsrI	ACTGG	5 cut(s)	955, 963, 1254, 1748, 1826
BssECI	CCNNGG	5 cut(s)	81, 261, 1069, 1307, 1515
BssMI	GATC	9 cut(s)	482, 532, 610, 760, 929, 1035, 1141, 1405, 1851
BssNI	GRCGYC	1 cut(s)	12
BssT1I	CCWWGG	2 cut(s)	81, 1069
Bst2UI	CCWGG	6 cut(s)	262, 876, 889, 1308, 1517, 1590
Bst4CI	ACNGT	4 cut(s)	871, 911, 981, 1786
Bst6I	CTCTTC	2 cut(s)	369, 1353
BstACI	GRCGYC	1 cut(s)	12
BstBAI	YACGTR	1 cut(s)	1166
BstC8I	GCNNGC	2 cut(s)	594, 1512
BstDEI	CTNAG	7 cut(s)	203, 315, 767, 842, 1015, 1459, 1734
BstF5I	GGATG	4 cut(s)	163, 1317, 1531, 1537
BstKTI	GATC	9 cut(s)	485, 535, 613, 763, 932, 1038, 1144, 1408, 1854
BstMAI	GTCTC	7 cut(s)	24, 141, 204, 429, 1395, 1486, 1676
BstMBI	GATC	9 cut(s)	482, 532, 610, 760, 929, 1035, 1141, 1405, 1851
BstMWI	GCNNNNNNNGC	7 cut(s)	494, 602, 772, 1262, 1394, 1715, 1754
BstNI	CCWGG	6 cut(s)	262, 876, 889, 1308, 1517, 1590
BstNSI	RCATGY	1 cut(s)	1582
BstSCI	CCNGG	6 cut(s)	260, 874, 887, 1306, 1515, 1588
BstSFI	CTRYAG	2 cut(s)	1383, 1487
BstSLI	GKGCMC	1 cut(s)	958
BstV1I	GCAGC	8 cut(s)	555, 601, 1369, 1397, 1408, 1411, 1693, 1715
BstV2I	GAAGAC	1 cut(s)	45
BstX2I	RGATCY	3 cut(s)	482, 610, 929
BstYI	RGATCY	3 cut(s)	482, 610, 929
BsuRI	GGCC	4 cut(s)	337, 923, 1117, 1514
BtsCI	GGATG	4 cut(s)	163, 1317, 1531, 1537
BtsIMutI	CAGTG	4 cut(s)	867, 956, 1023, 1353
Cac8I	GCNNGC	2 cut(s)	594, 1512
CaiI	CAGNNNCTG	5 cut(s)	1150, 1382, 1516, 1709, 1832
Cfr13I	GGNCC	3 cut(s)	85, 1116, 1513
CseI	GACGC	2 cut(s)	20, 1377
Csp6I	GTAC	1 cut(s)	962
CviAII	CATG	8 cut(s)	173, 571, 1192, 1318, 1394, 1579, 1739, 1873
CviQI	GTAC	1 cut(s)	962
DdeI	CTNAG	7 cut(s)	203, 315, 767, 842, 1015, 1459, 1734
DpnI	GATC	9 cut(s)	484, 534, 612, 762, 931, 1037, 1143, 1407, 1853
DpnII	GATC	9 cut(s)	482, 532, 610, 760, 929, 1035, 1141, 1405, 1851
DraI	TTTAAA	2 cut(s)	288, 1086
DrdI	GACNNNNNNGTC	1 cut(s)	92
DseDI	GACNNNNNNGTC	1 cut(s)	92
Eam1104I	CTCTTC	2 cut(s)	369, 1353
EarI	CTCTTC	2 cut(s)	369, 1353
Eco130I	CCWWGG	2 cut(s)	81, 1069
Eco31I	GGTCTC	2 cut(s)	429, 1676
Eco32I	GATATC	1 cut(s)	1006
Eco47I	GGWCC	1 cut(s)	85
Eco57I	CTGAAG	1 cut(s)	1377
Eco72I	CACGTG	1 cut(s)	1166
Eco88I	CYCGRG	1 cut(s)	426
EcoO109I	RGGNCCY	3 cut(s)	85, 1116, 1513
EcoRI	GAATTC	1 cut(s)	1613
EcoRII	CCWGG	6 cut(s)	260, 874, 887, 1306, 1515, 1588
EcoRV	GATATC	1 cut(s)	1006
EcoT14I	CCWWGG	2 cut(s)	81, 1069
ErhI	CCWWGG	2 cut(s)	81, 1069
Esp3I	CGTCTC	3 cut(s)	24, 141, 1395
FaeI	CATG	8 cut(s)	176, 574, 1195, 1321, 1397, 1582, 1742, 1876
FalI	AAGNNNNNCTT	4 cut(s)	260, 292, 1350, 1382
FaqI	GGGAC	1 cut(s)	849
FatI	CATG	8 cut(s)	172, 570, 1191, 1317, 1393, 1578, 1738, 1872
FauI	CCCGC	2 cut(s)	585, 727
FauNDI	CATATG	2 cut(s)	245, 850
FbaI	TGATCA	3 cut(s)	1141, 1405, 1851
FblI	GTMKAC	1 cut(s)	96
Fnu4HI	GCNGC	8 cut(s)	544, 590, 1383, 1386, 1422, 1425, 1704, 1707
FokI	GGATG	4 cut(s)	170, 1324, 1538, 1544
Fsp4HI	GCNGC	8 cut(s)	544, 590, 1383, 1386, 1422, 1425, 1704, 1707
FspBI	CTAG	3 cut(s)	1137, 1442, 1584
GluI	GCNGC	8 cut(s)	544, 590, 1383, 1386, 1422, 1425, 1704, 1707
GsaI	CCCAGC	1 cut(s)	1836
GsuI	CTGGAG	2 cut(s)	123, 1290
HaeIII	GGCC	4 cut(s)	337, 923, 1117, 1514
HapII	CCGG	3 cut(s)	144, 1053, 1541
HgaI	GACGC	2 cut(s)	20, 1377
Hin1I	GRCGYC	1 cut(s)	12
Hin1II	CATG	8 cut(s)	176, 574, 1195, 1321, 1397, 1582, 1742, 1876
HpaII	CCGG	3 cut(s)	144, 1053, 1541
HphI	GGTGA	3 cut(s)	638, 716, 877
Hpy166II	GTNNAC	2 cut(s)	97, 956
Hpy188I	TCNGA	6 cut(s)	29, 196, 685, 1033, 1339, 1378
Hpy8I	GTNNAC	2 cut(s)	97, 956
Hpy99I	CGWCG	2 cut(s)	38, 95
HpyAV	CCTTC	5 cut(s)	148, 751, 913, 1568, 1834
HpyCH4III	ACNGT	4 cut(s)	871, 911, 981, 1786
HpyCH4IV	ACGT	1 cut(s)	1165
HpyF10VI	GCNNNNNNNGC	7 cut(s)	494, 602, 772, 1262, 1394, 1715, 1754
HpyF3I	CTNAG	7 cut(s)	203, 315, 767, 842, 1015, 1459, 1734
HpySE526I	ACGT	1 cut(s)	1165
Hsp92I	GRCGYC	1 cut(s)	12
Hsp92II	CATG	8 cut(s)	176, 574, 1195, 1321, 1397, 1582, 1742, 1876
Ksp22I	TGATCA	3 cut(s)	1141, 1405, 1851
Kzo9I	GATC	9 cut(s)	482, 532, 610, 760, 929, 1035, 1141, 1405, 1851
LguI	GCTCTTC	1 cut(s)	1353
LmnI	GCTCC	1 cut(s)	878
Lsp1109I	GCAGC	8 cut(s)	555, 601, 1369, 1397, 1408, 1411, 1693, 1715
LweI	GCATC	5 cut(s)	97, 592, 627, 1302, 1369
MaeI	CTAG	3 cut(s)	1137, 1442, 1584
MaeII	ACGT	1 cut(s)	1165
MaeIII	GTNAC	3 cut(s)	310, 644, 901
MalI	GATC	9 cut(s)	484, 534, 612, 762, 931, 1037, 1143, 1407, 1853
MboI	GATC	9 cut(s)	482, 532, 610, 760, 929, 1035, 1141, 1405, 1851
MfeI	CAATTG	2 cut(s)	624, 816
MflI	RGATCY	3 cut(s)	482, 610, 929
MhlI	GDGCHC	1 cut(s)	958
MlyI	GAGTC	6 cut(s)	206, 386, 409, 690, 1059, 1861
MmeI	TCCRAC	2 cut(s)	673, 1642
MroXI	GAANNNNTTC	3 cut(s)	633, 1362, 1454
MslI	CAYNNNNRTG	2 cut(s)	171, 1398
MspA1I	CMGCKG	3 cut(s)	186, 592, 1706
MspI	CCGG	3 cut(s)	144, 1053, 1541
MspR9I	CCNGG	6 cut(s)	262, 876, 889, 1308, 1517, 1590
MunI	CAATTG	2 cut(s)	624, 816
Mva1269I	GAATGC	1 cut(s)	1621
MvaI	CCWGG	6 cut(s)	262, 876, 889, 1308, 1517, 1590
MwoI	GCNNNNNNNGC	7 cut(s)	494, 602, 772, 1262, 1394, 1715, 1754
NdeI	CATATG	2 cut(s)	245, 850
NdeII	GATC	9 cut(s)	482, 532, 610, 760, 929, 1035, 1141, 1405, 1851
NlaIII	CATG	8 cut(s)	176, 574, 1195, 1321, 1397, 1582, 1742, 1876
NmuCI	GTSAC	2 cut(s)	644, 901
NspI	RCATGY	1 cut(s)	1582
PaeR7I	CTCGAG	1 cut(s)	426
PciSI	GCTCTTC	1 cut(s)	1353
PcsI	WCGNNNNNNNCGW	3 cut(s)	39, 99, 1204
PctI	GAATGC	1 cut(s)	1621
PdmI	GAANNNNTTC	3 cut(s)	633, 1362, 1454
PfeI	GAWTC	4 cut(s)	74, 555, 896, 968
PflFI	GACNNNGTC	1 cut(s)	89
PflMI	CCANNNNNTGG	1 cut(s)	1832
PfoI	TCCNGGA	1 cut(s)	874
PkrI	GCNGC	8 cut(s)	545, 591, 1384, 1387, 1423, 1426, 1705, 1708
PleI	GAGTC	6 cut(s)	205, 385, 408, 690, 1059, 1861
PmaCI	CACGTG	1 cut(s)	1166
PmlI	CACGTG	1 cut(s)	1166
PpsI	GAGTC	6 cut(s)	205, 385, 408, 690, 1059, 1861
Ppu21I	YACGTR	1 cut(s)	1166
PpuMI	RGGWCCY	1 cut(s)	85
PshBI	ATTAAT	1 cut(s)	219
Psp5II	RGGWCCY	1 cut(s)	85
Psp6I	CCWGG	6 cut(s)	260, 874, 887, 1306, 1515, 1588
PspCI	CACGTG	1 cut(s)	1166
PspFI	CCCAGC	1 cut(s)	1832
PspGI	CCWGG	6 cut(s)	260, 874, 887, 1306, 1515, 1588
PspPI	GGNCC	3 cut(s)	85, 1116, 1513
PspPPI	RGGWCCY	1 cut(s)	85
PstI	CTGCAG	2 cut(s)	1387, 1491
PstNI	CAGNNNCTG	5 cut(s)	1150, 1382, 1516, 1709, 1832
PsuI	RGATCY	3 cut(s)	482, 610, 929
PsyI	GACNNNGTC	1 cut(s)	89
PvuII	CAGCTG	2 cut(s)	186, 1706
RsaI	GTAC	1 cut(s)	963
RsaNI	GTAC	1 cut(s)	962
RseI	CAYNNNNRTG	2 cut(s)	171, 1398
SapI	GCTCTTC	1 cut(s)	1353
SatI	GCNGC	8 cut(s)	544, 590, 1383, 1386, 1422, 1425, 1704, 1707
Sau3AI	GATC	9 cut(s)	482, 532, 610, 760, 929, 1035, 1141, 1405, 1851
Sau96I	GGNCC	3 cut(s)	85, 1116, 1513
SchI	GAGTC	6 cut(s)	206, 386, 409, 690, 1059, 1861
ScrFI	CCNGG	6 cut(s)	262, 876, 889, 1308, 1517, 1590
SduI	GDGCHC	1 cut(s)	958
SfaNI	GCATC	5 cut(s)	97, 592, 627, 1302, 1369
SfcI	CTRYAG	2 cut(s)	1383, 1487
Sfr274I	CTCGAG	1 cut(s)	426
SinI	GGWCC	1 cut(s)	85
SlaI	CTCGAG	1 cut(s)	426
SmiI	ATTTAAAT	1 cut(s)	288
SmiMI	CAYNNNNRTG	2 cut(s)	171, 1398
SmlI	CTYRAG	3 cut(s)	426, 1111, 1266
SmoI	CTYRAG	3 cut(s)	426, 1111, 1266
SsiI	CCGC	2 cut(s)	592, 734
SspI	AATATT	1 cut(s)	1863
SspMI	CTAG	3 cut(s)	1137, 1442, 1584
StyD4I	CCNGG	6 cut(s)	260, 874, 887, 1306, 1515, 1588
StyI	CCWWGG	2 cut(s)	81, 1069
SwaI	ATTTAAAT	1 cut(s)	288
TaaI	ACNGT	4 cut(s)	871, 911, 981, 1786
TaiI	ACGT	1 cut(s)	1168
TaqI	TCGA	5 cut(s)	427, 671, 1063, 1121, 1858
TaqII	GACCGA	1 cut(s)	889
TfiI	GAWTC	4 cut(s)	74, 555, 896, 968
TscAI	CASTG	4 cut(s)	874, 963, 1023, 1360
TseFI	GTSAC	2 cut(s)	644, 901
TseI	GCWGC	8 cut(s)	543, 589, 1382, 1385, 1421, 1424, 1703, 1706
Tsp45I	GTSAC	2 cut(s)	644, 901
TspGWI	ACGGA	4 cut(s)	805, 851, 1615, 1779
TspRI	CASTG	4 cut(s)	874, 963, 1023, 1360
Tth111I	GACNNNGTC	1 cut(s)	89
Van91I	CCANNNNNTGG	1 cut(s)	1832
VneI	GTGCAC	1 cut(s)	954
VpaK11BI	GGWCC	1 cut(s)	85
VspI	ATTAAT	1 cut(s)	219
XapI	RAATTY	5 cut(s)	5, 433, 1044, 1613, 1777
XbaI	TCTAGA	2 cut(s)	1441, 1583
XceI	RCATGY	1 cut(s)	1582
XhoI	CTCGAG	1 cut(s)	426
XmiI	GTMKAC	1 cut(s)	96
XmnI	GAANNNNTTC	3 cut(s)	633, 1362, 1454
XspI	CTAG	3 cut(s)	1137, 1442, 1584

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.