FvH4_4g12830

Peptidyl-prolyl

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0014948
Physical Location & Seq
Reverse (-)
16488534 .. 16492271
3738 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g12830.t1

Sequence Viewer

Length: 1701 bp
ATGGAAGACGACTTTGATTTCCCAACTGGCCCCAACCCTGAAGACGTCGACATGGACATCCCCGAGGAAGAAGACGACGCCATCAGCCCGGGCCCAATAAAGGTCGGCGATGAGAAGGAGCTTGGGAAGAATGGGCTCAAGAAGAAGCTAATCAAGCAAGGTGAAGGCTGGGAGACGCCTGGCTCCGGCGACGAGGTTCAAGTTCATTATACTGGGACTCTGCTTGATGGCACCAAGTTTGATTCCAGCCGTGATCGGGGGACGCCTTTCAAGTTCAGTCTTGGTCAAGGACAAGTGATCAAAGGATGGGATGAGGGCATTAAGACCATGAAGAAAGGTGAAAATGCAATTTTCACCATACCACCTGAGTTGGCTTATGGCGAGTCTGGATCCCCTCCAACTATTCCTCCCAATGCCACACTTCAGTTTGATGTGGAGTTGCTTTCCTGGACTAGTGTCAAGGACATATGCAAGGACGGTGGAGTTATTAAGAAGATTCTTACTGAAGGGGAGAAATGGGAGAATCCAAAAGACCTTGATGAAGTATTTGTCAAGTACGAGGCTCGTCTTGAGGATGGCACTCTCGTATCAAAATCTGATGGGGTAGAGTTCACTGTTGAAGATGGCTACTTATGCCCGGCCTTGGCAAAGGCTGTGAAAACAATGAAGAAAGGTGAAAAAGTCCATTTGACTGTTAAACCACAATATGGATTTGGTGAGGCTGGAAGACCAGCTGCTGGTGATGAAGGTGCAGTGCCTCCAAATGCAACTCTTAGTATATCTCTGGAGTTGATCTCTTGGAAGACAGTTTCAGATGTTACAAAGGATAAGAAGGTCCTGAAAAAGGCCTTAAAGGAGGGAGAGGGTTATGAACGCCCTAATGATGGTGCAGTTGTTCAAGTGAAAATGGTTGGGAAGTTGCATGATGGCACAATCTTTACGAAGAAGGGACATGATAATGAGCCATTTGAATTCAAGATAGATGAAGACCAAGTTATTGATGGACTTGATAGAGCGGTGAAGAGTATGAAGAAAGGGGAAGTGGCCCTAGTCACCATTCAACCTGAATATGCTTTTGGGTCGTCTGAGTCCACACAAGAGTTGGCTATTGTCCCTGCAAATTCAACTGTATATTATGAGGTGGAGCTGGTCTCCTTTGTCAAGGAGAAGGAATCTTGGGACATGAACACACAAGAAAAAATTGAAGCGGCTGGCAAAAAGAAGGAAGAAGGCAACGCACTCTTTAAGGCTGCCAAATATGAAAGAGCCTCAAAGAGATACGAAAAGGCTGTGAGATATATAGAGTACGACTCGAGCTTCAGTGATGATGAGAAGCAGCAGGCTAGGGTGCTGAAGATCACTTGCAATCTGAATGATGCTGCATGCAAGCTCAAACTGAAAAAGTACAAAGAGGCTGAAAAGCTTTGCACAAAGGTTCTGGAACTTGATAGTCGAAATGTGAAAGCCTTGTACAGGAGGGCGCAAGCCTACATTCAGCTTGTTGATTTGGACTTAGCAGAGCAGGACATTAAGAAGGCCCTTGAGATTGAACCAAACAACAAAGATGTGAAACTTGAGTACAAGCTTCTAAAGGAAAAAGTCCGAGAGTACAACAAAAAAGATGCTCAATTCTATGGCAATATATTTGCAAAAATGAGCAAACATGATCCAGTTCCAATGACCATTGATAGCAAGGCGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04915 map04915
Pfam Domains
Protein Families
FKBP_C TPR_1 TPR_8

Protein Analysis

567

Amino Acids

63.17

Weight (kDa)

5.24

Isoelectric Point (pI)

28.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FKBP_C PF00254 57 - 148 2.1e-38 FKBP-type peptidyl-prolyl cis-trans isomerase
FKBP_C PF00254 174 - 264 1.4e-17 FKBP-type peptidyl-prolyl cis-trans isomerase
FKBP_C PF00254 290 - 384 1.5e-24 FKBP-type peptidyl-prolyl cis-trans isomerase
TPR_19 PF14559 464 - 524 1.9e-06 Tetratricopeptide repeat
TPR_1 PF00515 487 - 520 3.6e-07 Tetratricopeptide repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014948)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G48570
fragaria_vesca FvH4_4g12830
malus_domestica MD04G1022400.v1.1
prunus_persica Prupe.1G172600_v2.0.a1
pyrus_communis pycom04g01940
rosa_chinensis RchiOBHm_Chr4g0412331
rosa_laevigata RLG00000008307
rosa_multiflora Rmu_co8161348.1_g000001 Rmu_sc0010364.1_g000002 Rmu_sc0024446.1_g000002 Rmu_sc0041848.1_g000001
rosa_roxburghii Rroxscaffold_5G00356460
rosa_rugosa Rorug04G0104700
rosa_samantha Rh4AG172300 Rh4CG183200
rosa_wichuraiana Rw4G014400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 48
AccB1I GGYRCC 1 cut(s) 230
AccB7I CCANNNNNTGG 2 cut(s) 707, 737
AccBSI CCGCTC 1 cut(s) 1016
AccI GTMKAC 1 cut(s) 48
AciI CCGC 2 cut(s) 1016, 1208
AclWI GGATC 3 cut(s) 384, 397, 1661
AcsI RAATTY 2 cut(s) 971, 1120
AcuI CTGAAG 5 cut(s) 60, 407, 525, 1303, 1373
AcyI GRCGYC 4 cut(s) 45, 78, 176, 263
AfaI GTAC 6 cut(s) 557, 1307, 1406, 1472, 1580, 1610
AfiI CCNNNNNNNGG 9 cut(s) 100, 185, 256, 643, 707, 737, 844, 884, 1473
AhlI ACTAGT 1 cut(s) 452
AjnI CCWGG 2 cut(s) 178, 446
AjuI GAANNNNNNNTTGG 2 cut(s) 1059, 1091
AluBI AGCT 9 cut(s) 121, 148, 734, 1147, 1317, 1390, 1423, 1498, 1585
AluI AGCT 9 cut(s) 121, 148, 734, 1147, 1317, 1390, 1423, 1498, 1585
Alw26I GTCTC 2 cut(s) 167, 1156
AlwI GGATC 3 cut(s) 384, 397, 1661
AlwNI CAGNNNCTG 1 cut(s) 737
Ama87I CYCGRG 3 cut(s) 62, 88, 1312
AoxI GGCC 6 cut(s) 28, 91, 639, 846, 1044, 1536
ApaI GGGCCC 1 cut(s) 95
ApeKI GCWGC 4 cut(s) 734, 1250, 1336, 1379
ApoI RAATTY 2 cut(s) 971, 1120
AspLEI GCGC 1 cut(s) 1483
AspS9I GGNCC 6 cut(s) 29, 91, 92, 835, 1045, 1537
AsuC2I CCSGG 3 cut(s) 89, 90, 638
AsuHPI GGTGA 8 cut(s) 173, 346, 350, 686, 728, 752, 1030, 1045
AvaI CYCGRG 3 cut(s) 62, 88, 1312
AvaII GGWCC 1 cut(s) 835
BaeGI GKGCMC 1 cut(s) 95
BaeI ACNNNNGTAYC 2 cut(s) 570, 603
BamHI GGATCC 1 cut(s) 389
BanI GGYRCC 1 cut(s) 230
BanII GRGCYC 2 cut(s) 95, 138
BbsI GAAGAC 6 cut(s) 12, 48, 78, 733, 809, 993
BbvI GCAGC 4 cut(s) 721, 1237, 1348, 1366
BccI CCATC 9 cut(s) 89, 221, 300, 569, 593, 617, 878, 920, 995
BceAI ACGGC 1 cut(s) 234
BciT130I CCWGG 2 cut(s) 180, 448
BclI TGATCA 1 cut(s) 297
BcnI CCSGG 3 cut(s) 89, 90, 638
BcoDI GTCTC 2 cut(s) 167, 1156
BcuI ACTAGT 1 cut(s) 452
BfaI CTAG 3 cut(s) 453, 1049, 1344
BisI GCNGC 5 cut(s) 735, 1209, 1251, 1337, 1380
BlsI GCNGC 5 cut(s) 736, 1210, 1252, 1338, 1381
Bme1390I CCNGG 5 cut(s) 89, 90, 180, 448, 638
Bme18I GGWCC 1 cut(s) 835
BmeT110I CYCGRG 3 cut(s) 62, 88, 1312
BmgT120I GGNCC 6 cut(s) 29, 91, 92, 835, 1045, 1537
BmiI GGNNCC 5 cut(s) 31, 93, 184, 232, 391
BmrFI CCNGG 5 cut(s) 89, 90, 180, 448, 638
BmrI ACTGGG 1 cut(s) 222
BmsI GCATC 2 cut(s) 1366, 1612
BmuI ACTGGG 1 cut(s) 222
BoxI GACNNNNGTC 1 cut(s) 455
BpiI GAAGAC 6 cut(s) 12, 48, 78, 733, 809, 993
BplI GAGNNNNNCTC 6 cut(s) 779, 811, 1136, 1168, 1295, 1327
BpmI CTGGAG 1 cut(s) 806
BpuEI CTTGAG 4 cut(s) 122, 590, 1562, 1595
BpuMI CCSGG 3 cut(s) 89, 90, 638
BsaHI GRCGYC 4 cut(s) 45, 78, 176, 263
BsaI GGTCTC 1 cut(s) 1156
BsaJI CCNNGG 3 cut(s) 63, 88, 642
BsaXI ACNNNNNCTCC 2 cut(s) 391, 421
Bsc4I CCNNNNNNNGG 9 cut(s) 100, 185, 256, 643, 707, 737, 844, 884, 1473
Bse1I ACTGG 3 cut(s) 31, 217, 1670
BseBI CCWGG 2 cut(s) 180, 448
BseDI CCNNGG 3 cut(s) 63, 88, 642
BseGI GGATG 4 cut(s) 57, 311, 316, 580
BseLI CCNNNNNNNGG 9 cut(s) 100, 185, 256, 643, 707, 737, 844, 884, 1473
BseMII CTCAG 2 cut(s) 357, 1077
BseNI ACTGG 3 cut(s) 31, 217, 1670
BseSI GKGCMC 1 cut(s) 95
BseXI GCAGC 4 cut(s) 721, 1237, 1348, 1366
BseYI CCCAGC 1 cut(s) 168
BsgI GTGCAG 2 cut(s) 771, 909
BshFI GGCC 6 cut(s) 30, 93, 641, 848, 1046, 1538
BshNI GGYRCC 1 cut(s) 230
BsiHKCI CYCGRG 3 cut(s) 62, 88, 1312
BsiSI CCGG 3 cut(s) 89, 186, 638
BslFI GGGAC 5 cut(s) 229, 274, 963, 1097, 1193
BslI CCNNNNNNNGG 9 cut(s) 100, 185, 256, 643, 707, 737, 844, 884, 1473
BsmAI GTCTC 2 cut(s) 167, 1156
BsmBI CGTCTC 1 cut(s) 167
BsmFI GGGAC 5 cut(s) 229, 274, 963, 1097, 1193
BsnI GGCC 6 cut(s) 30, 93, 641, 848, 1046, 1538
Bso31I GGTCTC 1 cut(s) 1156
BsoBI CYCGRG 3 cut(s) 62, 88, 1312
Bsp120I GGGCCC 1 cut(s) 91
Bsp1286I GDGCHC 2 cut(s) 95, 138
Bsp1407I TGTACA 1 cut(s) 1470
Bsp143I GATC 6 cut(s) 253, 297, 389, 792, 1356, 1666
BspACI CCGC 2 cut(s) 1016, 1208
BspANI GGCC 6 cut(s) 30, 93, 641, 848, 1046, 1538
BspCNI CTCAG 2 cut(s) 358, 1078
BspLI GGNNCC 5 cut(s) 31, 93, 184, 232, 391
BspPI GGATC 3 cut(s) 384, 397, 1661
BspT107I GGYRCC 1 cut(s) 230
BspTNI GGTCTC 1 cut(s) 1156
BsrBI CCGCTC 1 cut(s) 1016
BsrGI TGTACA 1 cut(s) 1470
BsrI ACTGG 3 cut(s) 31, 217, 1670
BssECI CCNNGG 3 cut(s) 63, 88, 642
BssMI GATC 6 cut(s) 253, 297, 389, 792, 1356, 1666
BssNI GRCGYC 4 cut(s) 45, 78, 176, 263
BssT1I CCWWGG 1 cut(s) 642
Bst2UI CCWGG 2 cut(s) 180, 448
Bst4CI ACNGT 5 cut(s) 479, 616, 694, 808, 1129
Bst6I CTCTTC 1 cut(s) 1016
BstACI GRCGYC 4 cut(s) 45, 78, 176, 263
BstAUI TGTACA 1 cut(s) 1470
BstC8I GCNNGC 5 cut(s) 1213, 1341, 1384, 1388, 1485
BstDEI CTNAG 4 cut(s) 366, 773, 1086, 1513
BstENI CCTNNNNNAGG 2 cut(s) 842, 1471
BstF5I GGATG 4 cut(s) 57, 311, 316, 580
BstHHI GCGC 1 cut(s) 1483
BstKTI GATC 6 cut(s) 256, 300, 392, 795, 1359, 1669
BstMAI GTCTC 2 cut(s) 167, 1156
BstMBI GATC 6 cut(s) 253, 297, 389, 792, 1356, 1666
BstMWI GCNNNNNNNGC 2 cut(s) 154, 633
BstNI CCWGG 2 cut(s) 180, 448
BstNSI RCATGY 1 cut(s) 1386
BstPAI GACNNNNGTC 1 cut(s) 455
BstSCI CCNGG 5 cut(s) 87, 88, 178, 446, 636
BstSLI GKGCMC 1 cut(s) 95
BstV1I GCAGC 4 cut(s) 721, 1237, 1348, 1366
BstV2I GAAGAC 6 cut(s) 12, 48, 78, 733, 809, 993
BstX2I RGATCY 1 cut(s) 389
BstYI RGATCY 1 cut(s) 389
BsuRI GGCC 6 cut(s) 30, 93, 641, 848, 1046, 1538
BtgZI GCGATG 1 cut(s) 123
BtsCI GGATG 4 cut(s) 57, 311, 316, 580
BtsI GCAGTG 1 cut(s) 759
BtsIMutI CAGTG 3 cut(s) 612, 759, 1327
Cac8I GCNNGC 5 cut(s) 1213, 1341, 1384, 1388, 1485
CaiI CAGNNNCTG 1 cut(s) 737
CfoI GCGC 1 cut(s) 1483
Cfr13I GGNCC 6 cut(s) 29, 91, 92, 835, 1045, 1537
Cfr9I CCCGGG 1 cut(s) 88
CseI GACGC 3 cut(s) 86, 184, 271
Csp6I GTAC 6 cut(s) 556, 1306, 1405, 1471, 1579, 1609
CspCI CAANNNNNGTGG 4 cut(s) 351, 386, 460, 495
CviAII CATG 7 cut(s) 52, 328, 923, 953, 1183, 1383, 1664
CviQI GTAC 6 cut(s) 556, 1306, 1405, 1471, 1579, 1609
DdeI CTNAG 4 cut(s) 366, 773, 1086, 1513
DpnI GATC 6 cut(s) 255, 299, 391, 794, 1358, 1668
DpnII GATC 6 cut(s) 253, 297, 389, 792, 1356, 1666
Eam1104I CTCTTC 1 cut(s) 1016
EarI CTCTTC 1 cut(s) 1016
Eco130I CCWWGG 1 cut(s) 642
Eco147I AGGCCT 1 cut(s) 848
Eco24I GRGCYC 2 cut(s) 95, 138
Eco31I GGTCTC 1 cut(s) 1156
Eco47I GGWCC 1 cut(s) 835
Eco57I CTGAAG 5 cut(s) 60, 407, 525, 1303, 1373
Eco88I CYCGRG 3 cut(s) 62, 88, 1312
EcoNI CCTNNNNNAGG 2 cut(s) 842, 1471
EcoO109I RGGNCCY 2 cut(s) 835, 1537
EcoRI GAATTC 1 cut(s) 971
EcoRII CCWGG 2 cut(s) 178, 446
EcoT14I CCWWGG 1 cut(s) 642
EcoT38I GRGCYC 2 cut(s) 95, 138
ErhI CCWWGG 1 cut(s) 642
Esp3I CGTCTC 1 cut(s) 167
FaeI CATG 7 cut(s) 55, 331, 926, 956, 1186, 1386, 1667
FaqI GGGAC 5 cut(s) 229, 274, 963, 1097, 1193
FatI CATG 7 cut(s) 51, 327, 922, 952, 1182, 1382, 1663
FauNDI CATATG 1 cut(s) 467
FbaI TGATCA 1 cut(s) 297
FblI GTMKAC 1 cut(s) 48
Fnu4HI GCNGC 5 cut(s) 735, 1209, 1251, 1337, 1380
FokI GGATG 4 cut(s) 44, 318, 323, 587
FriOI GRGCYC 2 cut(s) 95, 138
Fsp4HI GCNGC 5 cut(s) 735, 1209, 1251, 1337, 1380
FspBI CTAG 3 cut(s) 453, 1049, 1344
GlaI GCGC 1 cut(s) 1482
GluI GCNGC 5 cut(s) 735, 1209, 1251, 1337, 1380
GsaI CCCAGC 1 cut(s) 172
GsuI CTGGAG 1 cut(s) 806
HaeIII GGCC 6 cut(s) 30, 93, 641, 848, 1046, 1538
HapII CCGG 3 cut(s) 89, 186, 638
HgaI GACGC 3 cut(s) 86, 184, 271
HhaI GCGC 1 cut(s) 1483
Hin1I GRCGYC 4 cut(s) 45, 78, 176, 263
Hin1II CATG 7 cut(s) 55, 331, 926, 956, 1186, 1386, 1667
Hin6I GCGC 1 cut(s) 1481
HinP1I GCGC 1 cut(s) 1481
HincII GTYRAC 1 cut(s) 49
HindII GTYRAC 1 cut(s) 49
HindIII AAGCTT 2 cut(s) 1421, 1583
HinfI GANTC 8 cut(s) 217, 242, 383, 496, 523, 1088, 1172, 1310
HpaII CCGG 3 cut(s) 89, 186, 638
HphI GGTGA 8 cut(s) 173, 346, 350, 686, 728, 752, 1030, 1045
Hpy166II GTNNAC 3 cut(s) 49, 612, 1092
Hpy188I TCNGA 5 cut(s) 598, 814, 1087, 1371, 1604
Hpy188III TCNNGA 7 cut(s) 139, 387, 569, 785, 838, 976, 1439
Hpy8I GTNNAC 3 cut(s) 49, 612, 1092
Hpy99I CGWCG 3 cut(s) 50, 80, 194
HpyCH4III ACNGT 5 cut(s) 479, 616, 694, 808, 1129
HpyCH4IV ACGT 1 cut(s) 45
HpyF10VI GCNNNNNNNGC 2 cut(s) 154, 633
HpyF3I CTNAG 4 cut(s) 366, 773, 1086, 1513
HpySE526I ACGT 1 cut(s) 45
Hsp92I GRCGYC 4 cut(s) 45, 78, 176, 263
Hsp92II CATG 7 cut(s) 55, 331, 926, 956, 1186, 1386, 1667
HspAI GCGC 1 cut(s) 1481
Ksp22I TGATCA 1 cut(s) 297
Kzo9I GATC 6 cut(s) 253, 297, 389, 792, 1356, 1666
LmnI GCTCC 3 cut(s) 118, 188, 1144
Lsp1109I GCAGC 4 cut(s) 721, 1237, 1348, 1366
LweI GCATC 2 cut(s) 1366, 1612
MaeI CTAG 3 cut(s) 453, 1049, 1344
MaeII ACGT 1 cut(s) 45
MaeIII GTNAC 2 cut(s) 817, 1051
MalI GATC 6 cut(s) 255, 299, 391, 794, 1358, 1668
MbiI CCGCTC 1 cut(s) 1016
MboI GATC 6 cut(s) 253, 297, 389, 792, 1356, 1666
MflI RGATCY 1 cut(s) 389
MhlI GDGCHC 2 cut(s) 95, 138
MluCI AATT 5 cut(s) 348, 971, 1120, 1200, 1628
MlyI GAGTC 4 cut(s) 211, 392, 1097, 1304
MmeI TCCRAC 1 cut(s) 422
MseI TTAA 6 cut(s) 321, 489, 696, 851, 1245, 1530
MslI CAYNNNNRTG 1 cut(s) 957
MspA1I CMGCKG 1 cut(s) 734
MspI CCGG 3 cut(s) 89, 186, 638
MspR9I CCNGG 5 cut(s) 89, 90, 180, 448, 638
MvaI CCWGG 2 cut(s) 180, 448
MwoI GCNNNNNNNGC 2 cut(s) 154, 633
NciI CCSGG 3 cut(s) 89, 90, 638
NdeI CATATG 1 cut(s) 467
NdeII GATC 6 cut(s) 253, 297, 389, 792, 1356, 1666
NlaIII CATG 7 cut(s) 55, 331, 926, 956, 1186, 1386, 1667
NlaIV GGNNCC 5 cut(s) 31, 93, 184, 232, 391
NmuCI GTSAC 1 cut(s) 1051
NspI RCATGY 1 cut(s) 1386
PaeI GCATGC 1 cut(s) 1386
PaeR7I CTCGAG 1 cut(s) 1312
PceI AGGCCT 1 cut(s) 848
PfeI GAWTC 4 cut(s) 242, 496, 523, 1172
PflMI CCANNNNNTGG 2 cut(s) 707, 737
PfoI TCCNGGA 1 cut(s) 446
PkrI GCNGC 5 cut(s) 736, 1210, 1252, 1338, 1381
PleI GAGTC 4 cut(s) 211, 391, 1096, 1304
PpsI GAGTC 4 cut(s) 211, 391, 1096, 1304
PpuMI RGGWCCY 1 cut(s) 835
PshAI GACNNNNGTC 1 cut(s) 455
Psp5II RGGWCCY 1 cut(s) 835
Psp6I CCWGG 2 cut(s) 178, 446
PspFI CCCAGC 1 cut(s) 168
PspGI CCWGG 2 cut(s) 178, 446
PspN4I GGNNCC 5 cut(s) 31, 93, 184, 232, 391
PspOMI GGGCCC 1 cut(s) 91
PspPI GGNCC 6 cut(s) 29, 91, 92, 835, 1045, 1537
PspPPI RGGWCCY 1 cut(s) 835
PspXI VCTCGAGB 1 cut(s) 1312
PstNI CAGNNNCTG 1 cut(s) 737
PsuI RGATCY 1 cut(s) 389
PvuII CAGCTG 1 cut(s) 734
RsaI GTAC 6 cut(s) 557, 1307, 1406, 1472, 1580, 1610
RsaNI GTAC 6 cut(s) 556, 1306, 1405, 1471, 1579, 1609
RseI CAYNNNNRTG 1 cut(s) 957
SalI GTCGAC 1 cut(s) 47
SaqAI TTAA 6 cut(s) 321, 489, 696, 851, 1245, 1530
SatI GCNGC 5 cut(s) 735, 1209, 1251, 1337, 1380
Sau3AI GATC 6 cut(s) 253, 297, 389, 792, 1356, 1666
Sau96I GGNCC 6 cut(s) 29, 91, 92, 835, 1045, 1537
SchI GAGTC 4 cut(s) 211, 392, 1097, 1304
ScrFI CCNGG 5 cut(s) 89, 90, 180, 448, 638
SduI GDGCHC 2 cut(s) 95, 138
SfaNI GCATC 2 cut(s) 1366, 1612
Sfr274I CTCGAG 1 cut(s) 1312
SinI GGWCC 1 cut(s) 835
SlaI CTCGAG 1 cut(s) 1312
SmaI CCCGGG 1 cut(s) 90
SmiMI CAYNNNNRTG 1 cut(s) 957
SmlI CTYRAG 5 cut(s) 137, 569, 1312, 1541, 1574
SmoI CTYRAG 5 cut(s) 137, 569, 1312, 1541, 1574
SpeI ACTAGT 1 cut(s) 452
SphI GCATGC 1 cut(s) 1386
SrfI GCCCGGGC 1 cut(s) 90
Sse9I AATT 5 cut(s) 348, 971, 1120, 1200, 1628
SseBI AGGCCT 1 cut(s) 848
SsiI CCGC 2 cut(s) 1016, 1208
SspMI CTAG 3 cut(s) 453, 1049, 1344
StuI AGGCCT 1 cut(s) 848
StyD4I CCNGG 5 cut(s) 87, 88, 178, 446, 636
StyI CCWWGG 1 cut(s) 642
TaaI ACNGT 5 cut(s) 479, 616, 694, 808, 1129
TaiI ACGT 1 cut(s) 48
TaqI TCGA 3 cut(s) 48, 1313, 1453
TasI AATT 5 cut(s) 348, 971, 1120, 1200, 1628
TatI WGTACW 4 cut(s) 1404, 1470, 1578, 1608
TauI GCSGC 1 cut(s) 1211
TfiI GAWTC 4 cut(s) 242, 496, 523, 1172
Tru1I TTAA 6 cut(s) 321, 489, 696, 851, 1245, 1530
Tru9I TTAA 6 cut(s) 321, 489, 696, 851, 1245, 1530
TscAI CASTG 3 cut(s) 619, 759, 1327
TseFI GTSAC 1 cut(s) 1051
TseI GCWGC 4 cut(s) 734, 1250, 1336, 1379
Tsp45I GTSAC 1 cut(s) 1051
TspMI CCCGGG 1 cut(s) 88
TspRI CASTG 3 cut(s) 619, 759, 1327
Van91I CCANNNNNTGG 2 cut(s) 707, 737
VpaK11BI GGWCC 1 cut(s) 835
XagI CCTNNNNNAGG 2 cut(s) 842, 1471
XapI RAATTY 2 cut(s) 971, 1120
XceI RCATGY 1 cut(s) 1386
XcmI CCANNNNNNNNNTGG 2 cut(s) 998, 1099
XhoI CTCGAG 1 cut(s) 1312
XmaI CCCGGG 1 cut(s) 88
XmiI GTMKAC 1 cut(s) 48
XspI CTAG 3 cut(s) 453, 1049, 1344
ZraI GACGTC 1 cut(s) 46
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.