MD04G1022400.v1.1

Peptidyl-prolyl

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr04
OG0014948
Physical Location & Seq
Forward (+)
2630451 .. 2633859
3409 bp
Loading structure...
UTR
Exon/CDS
Intron
MD04G1022400.v1.1.491

Sequence Viewer

Length: 1704 bp
ATGGAAGACGACTTTGATTTCTCAGCTGCCACCAACAACCTCAACGACGCCGGTGACTTGGACCTTCCCGACGCCGAGGACGACGCAACTAGCCCAACTCTCAAGGTTGGTGATGAGAAGGAGATCGGGAAGAACGGCCTCAAGAAGAAGCTCCTTAAAGAAGGTGAAGGCTGGGACACTCCCGGCTCCGGCGACGAAGTTGAAGTGCATTACACTGGGACTCTGCTGGACGGAACGAAATTCGATTCGAGCCGTGACCGTGGGACCCCTTTCAAGTTCAATCTCGGACAAGGACAAGTGATTAAGGGATGGGATGAAGGAATCAAAACCATGAAGAAGGGCGAAAATGCGGTTTTCACCATACCGCCTGAGTTGGCCTACGGTGAGTCTGGATCCCCTCCAACGATTCCTCCGAATGCCACACTTCAGTTCGATGTGGAGTTGCTTTCCTGGACGAGTGTGAAGGACATTCTCAAGGACGGCGGAGTTATGAAGAAAATTATCACCGAAGGAGAGAAATGGGAGAATCCGAAAGACCTTGACGAAGTGTTTGTTAAGTACGAGGCTCGGCTTGAAGATGGGACTCTTGTTTCGAAATCCAATGGGGTCGAGTTTACTGTCCAGGATGGCTATTTCTGCCCCGCCTTGGCAAAAGCTGTGAAAACAATGAAGAAAGGCGAAAAGGTCCTTTTGACTGTAAAGCCACAATATGGATTTGGAGAGGCGGGCAGGCCAGCTATAGGGGATGAAGGCGCAGTGCCGCCAAATGCGACCCTTGAGATAGCGCTCGAGTTGGTATCGTGGAAGACGGTTTCTGATGTTACCAAAGATAAGAAGGTCCTCAAAAAGACATTGAAGGAGGGAGAGGGGTATGAGCGCCCGAATGATGGGGCGGTTGTTAAAGTGAAACTTGTTGGGAAGTTGCCTGATGGCACGATCTTCACAAAGAAGGGCCATGATGACGAGCCATTCGAGTTCAAGACGGATGAAGAGCAAGTAATTGAGGGACTCGATAGAGCTGTGAAGAACATGAAGAAAGGTGAAGGGGCTCTTGTGACCATTCAACCAGAATATGCATTCGGGTCGACCGAATCAGCACAAGATTTGGCTGTGGTTCCTGCAAATTCGACGGTCCATTATGAGGTGGAGCTGGTCTCCTTTGTCAAGGACAAGGAGTCTTGGGACATGAACACACAAGAAAAAATCGAAAGCGCTGGGAAGAAGAAGGAAGAAGGGAATGCACTCTTCAAGGCTGGTAAATACGAAAGAGCCTCCAAGAGATACGAAAAGGCTGTGAGGTTTATCGAATATGACTCCACTTTCGGCGACGAGGAGAAGCAGCAGGCGAAGGCGCTGAAAATAACCTGCAATCTGAATGATGCTGCGTGCAAGCTGAAACTCAAGGACTACAAGCAGGCTGAGAAGCTCTGCACAAAGGTTTTGGATTTAGACAGCCGGAATGTTAAGGCTTTGTACAGGAGGGCGCAAGCGTATATCCAACTTGTGGATTTGGACTTAGCAGAGCTGGATATCAAGAAGGCCCTTGAGATAGACCCCGACAACAGGGATGTGAAACAGGAGTATAAGGTATTGAAGCAGAAAGTGAGAGAGTACAACAAGAAGGACGCGCAGTTCTACGGCAACATATTTGCAAAAATGAACAAGCAGGAGCCGGTGCCGATGACCATCGACAGCAAGGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04915 map04915
Pfam Domains
Protein Families
FKBP_C TPR_1 TPR_8

Protein Analysis

568

Amino Acids

63.05

Weight (kDa)

5.16

Isoelectric Point (pI)

28.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FKBP_C PF00254 59 - 149 4.1e-38 FKBP-type peptidyl-prolyl cis-trans isomerase
FKBP_C PF00254 175 - 266 5.3e-18 FKBP-type peptidyl-prolyl cis-trans isomerase
FKBP_C PF00254 291 - 385 6.9e-24 FKBP-type peptidyl-prolyl cis-trans isomerase
TPR_19 PF14559 465 - 525 3.1e-06 Tetratricopeptide repeat
TPR_1 PF00515 488 - 521 1.1e-06 Tetratricopeptide repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014948)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G48570
fragaria_vesca FvH4_4g12830
malus_domestica MD04G1022400.v1.1
prunus_persica Prupe.1G172600_v2.0.a1
pyrus_communis pycom04g01940
rosa_chinensis RchiOBHm_Chr4g0412331
rosa_laevigata RLG00000008307
rosa_multiflora Rmu_co8161348.1_g000001 Rmu_sc0010364.1_g000002 Rmu_sc0024446.1_g000002 Rmu_sc0041848.1_g000001
rosa_roxburghii Rroxscaffold_5G00356460
rosa_rugosa Rorug04G0104700
rosa_samantha Rh4AG172300 Rh4CG183200
rosa_wichuraiana Rw4G014400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1373
AccB1I GGYRCC 1 cut(s) 1675
AccB7I CCANNNNNTGG 2 cut(s) 710, 1504
AccI GTMKAC 1 cut(s) 1085
AccII CGCG 1 cut(s) 1628
AciI CCGC 7 cut(s) 350, 365, 483, 642, 725, 761, 893
AclWI GGATC 2 cut(s) 387, 400
AcsI RAATTY 2 cut(s) 239, 1123
AcuI CTGAAG 1 cut(s) 410
AcyI GRCGYC 2 cut(s) 48, 72
AfaI GTAC 3 cut(s) 560, 1475, 1613
AfeI AGCGCT 2 cut(s) 786, 1213
AfiI CCNNNNNNNGG 8 cut(s) 188, 646, 710, 740, 887, 1141, 1504, 1563
AgsI TTSAA 9 cut(s) 203, 274, 280, 575, 856, 979, 1064, 1249, 1594
AhdI GACNNNNNGTC 1 cut(s) 1174
AjnI CCWGG 2 cut(s) 449, 621
AloI GAACNNNNNNTCC 2 cut(s) 1616, 1648
AluBI AGCT 9 cut(s) 26, 151, 656, 737, 1019, 1150, 1393, 1426, 1525
AluI AGCT 9 cut(s) 26, 151, 656, 737, 1019, 1150, 1393, 1426, 1525
Alw26I GTCTC 1 cut(s) 1159
AlwI GGATC 2 cut(s) 387, 400
Ama87I CYCGRG 1 cut(s) 788
Aor51HI AGCGCT 2 cut(s) 786, 1213
AoxI GGCC 5 cut(s) 136, 375, 731, 952, 1539
ApeKI GCWGC 3 cut(s) 26, 1339, 1382
ApoI RAATTY 2 cut(s) 239, 1123
ArsI GACNNNNNNTTYG 8 cut(s) 533, 565, 574, 606, 953, 985, 1304, 1336
AspLEI GCGC 7 cut(s) 755, 787, 879, 1214, 1354, 1486, 1630
AspS9I GGNCC 7 cut(s) 61, 264, 685, 838, 952, 1132, 1540
AsuC2I CCSGG 1 cut(s) 183
AsuHPI GGTGA 7 cut(s) 65, 122, 176, 349, 395, 496, 1052
AsuII TTCGAA 1 cut(s) 593
AvaI CYCGRG 1 cut(s) 788
AvaII GGWCC 5 cut(s) 61, 264, 685, 838, 1132
BamHI GGATCC 1 cut(s) 392
BanI GGYRCC 1 cut(s) 1675
BanII GRGCYC 1 cut(s) 1051
BbsI GAAGAC 2 cut(s) 12, 812
BbvI GCAGC 3 cut(s) 13, 1351, 1369
BccI CCATC 6 cut(s) 303, 572, 620, 881, 923, 1694
BceAI ACGGC 4 cut(s) 151, 237, 496, 1654
BcgI CGANNNNNNTGC 2 cut(s) 1065, 1099
BciT130I CCWGG 2 cut(s) 451, 623
BcnI CCSGG 1 cut(s) 183
BcoDI GTCTC 1 cut(s) 1159
BfaI CTAG 1 cut(s) 90
BfmI CTRYAG 1 cut(s) 738
BfoI RGCGCY 4 cut(s) 788, 880, 1215, 1355
BfuAI ACCTGC 1 cut(s) 1373
BisI GCNGC 4 cut(s) 27, 761, 1340, 1383
BlsI GCNGC 4 cut(s) 28, 762, 1341, 1384
Bme1390I CCNGG 3 cut(s) 183, 451, 623
Bme18I GGWCC 5 cut(s) 61, 264, 685, 838, 1132
BmeRI GACNNNNNGTC 1 cut(s) 1174
BmeT110I CYCGRG 1 cut(s) 788
BmgT120I GGNCC 7 cut(s) 61, 264, 685, 838, 952, 1132, 1540
BmiI GGNNCC 7 cut(s) 187, 265, 266, 394, 1116, 1671, 1677
BmrFI CCNGG 3 cut(s) 183, 451, 623
BmrI ACTGGG 1 cut(s) 225
BmsI GCATC 1 cut(s) 1369
BmuI ACTGGG 1 cut(s) 225
BpiI GAAGAC 2 cut(s) 12, 812
BplI GAGNNNNNCTC 2 cut(s) 1139, 1171
Bpu14I TTCGAA 1 cut(s) 593
BpuEI CTTGAG 6 cut(s) 86, 125, 458, 797, 1385, 1565
BpuMI CCSGG 1 cut(s) 183
BsaBI GATNNNNATC 1 cut(s) 1685
BsaHI GRCGYC 2 cut(s) 48, 72
BsaI GGTCTC 1 cut(s) 1159
BsaJI CCNNGG 3 cut(s) 75, 259, 645
BsaXI ACNNNNNCTCC 2 cut(s) 394, 424
Bsc4I CCNNNNNNNGG 8 cut(s) 188, 646, 710, 740, 887, 1141, 1504, 1563
Bse118I RCCGGY 2 cut(s) 50, 1672
Bse1I ACTGG 1 cut(s) 220
Bse8I GATNNNNATC 1 cut(s) 1685
BseBI CCWGG 2 cut(s) 451, 623
BseDI CCNNGG 3 cut(s) 75, 259, 645
BseGI GGATG 6 cut(s) 314, 319, 631, 751, 991, 1573
BseJI GATNNNNATC 1 cut(s) 1685
BseLI CCNNNNNNNGG 8 cut(s) 188, 646, 710, 740, 887, 1141, 1504, 1563
BseMII CTCAG 3 cut(s) 36, 360, 1410
BseNI ACTGG 1 cut(s) 220
BseRI GAGGAG 1 cut(s) 1346
BseXI GCAGC 3 cut(s) 13, 1351, 1369
BseYI CCCAGC 2 cut(s) 171, 1214
BsgI GTGCAG 1 cut(s) 1414
Bsh1236I CGCG 1 cut(s) 1628
Bsh1285I CGRYCG 1 cut(s) 1089
BshFI GGCC 5 cut(s) 138, 377, 733, 954, 1541
BshNI GGYRCC 1 cut(s) 1675
BsiEI CGRYCG 1 cut(s) 1089
BsiHKCI CYCGRG 1 cut(s) 788
BsiSI CCGG 5 cut(s) 51, 183, 189, 1456, 1673
BslFI GGGAC 6 cut(s) 188, 232, 277, 595, 1020, 1196
BslI CCNNNNNNNGG 8 cut(s) 188, 646, 710, 740, 887, 1141, 1504, 1563
BsmAI GTCTC 1 cut(s) 1159
BsmFI GGGAC 6 cut(s) 188, 232, 277, 595, 1020, 1196
BsmI GAATGC 3 cut(s) 421, 1076, 1243
BsnI GGCC 5 cut(s) 138, 377, 733, 954, 1541
Bso31I GGTCTC 1 cut(s) 1159
BsoBI CYCGRG 1 cut(s) 788
Bsp119I TTCGAA 1 cut(s) 593
Bsp1286I GDGCHC 1 cut(s) 1051
Bsp1407I TGTACA 1 cut(s) 1473
Bsp143I GATC 3 cut(s) 123, 392, 936
BspACI CCGC 7 cut(s) 350, 365, 483, 642, 725, 761, 893
BspANI GGCC 5 cut(s) 138, 377, 733, 954, 1541
BspCNI CTCAG 3 cut(s) 35, 361, 1411
BspFNI CGCG 1 cut(s) 1628
BspLI GGNNCC 7 cut(s) 187, 265, 266, 394, 1116, 1671, 1677
BspMI ACCTGC 1 cut(s) 1373
BspPI GGATC 2 cut(s) 387, 400
BspQI GCTCTTC 1 cut(s) 984
BspT104I TTCGAA 1 cut(s) 593
BspT107I GGYRCC 1 cut(s) 1675
BspTNI GGTCTC 1 cut(s) 1159
BsrFI RCCGGY 2 cut(s) 50, 1672
BsrGI TGTACA 1 cut(s) 1473
BsrI ACTGG 1 cut(s) 220
BssAI RCCGGY 2 cut(s) 50, 1672
BssECI CCNNGG 3 cut(s) 75, 259, 645
BssMI GATC 3 cut(s) 123, 392, 936
BssNI GRCGYC 2 cut(s) 48, 72
BssT1I CCWWGG 1 cut(s) 645
Bst2UI CCWGG 2 cut(s) 451, 623
Bst4CI ACNGT 6 cut(s) 260, 383, 619, 697, 811, 1132
Bst6I CTCTTC 2 cut(s) 984, 1250
BstACI GRCGYC 2 cut(s) 48, 72
BstAUI TGTACA 1 cut(s) 1473
BstBI TTCGAA 1 cut(s) 593
BstC8I GCNNGC 8 cut(s) 727, 731, 735, 1344, 1387, 1391, 1416, 1488
BstDEI CTNAG 4 cut(s) 22, 369, 1419, 1516
BstDSI CCRYGG 1 cut(s) 259
BstF5I GGATG 6 cut(s) 314, 319, 631, 751, 991, 1573
BstFNI CGCG 1 cut(s) 1628
BstH2I RGCGCY 4 cut(s) 788, 880, 1215, 1355
BstHHI GCGC 7 cut(s) 755, 787, 879, 1214, 1354, 1486, 1630
BstKTI GATC 3 cut(s) 126, 395, 939
BstMAI GTCTC 1 cut(s) 1159
BstMBI GATC 3 cut(s) 123, 392, 936
BstMCI CGRYCG 1 cut(s) 1089
BstMWI GCNNNNNNNGC 1 cut(s) 636
BstNI CCWGG 2 cut(s) 451, 623
BstSCI CCNGG 3 cut(s) 181, 449, 621
BstSFI CTRYAG 1 cut(s) 738
BstUI CGCG 1 cut(s) 1628
BstV1I GCAGC 3 cut(s) 13, 1351, 1369
BstV2I GAAGAC 2 cut(s) 12, 812
BstX2I RGATCY 1 cut(s) 392
BstYI RGATCY 1 cut(s) 392
BsuRI GGCC 5 cut(s) 138, 377, 733, 954, 1541
BtgI CCRYGG 1 cut(s) 259
BtsCI GGATG 6 cut(s) 314, 319, 631, 751, 991, 1573
BtsI GCAGTG 1 cut(s) 762
BtsIMutI CAGTG 2 cut(s) 213, 762
BveI ACCTGC 1 cut(s) 1373
Cac8I GCNNGC 8 cut(s) 727, 731, 735, 1344, 1387, 1391, 1416, 1488
CfoI GCGC 7 cut(s) 755, 787, 879, 1214, 1354, 1486, 1630
Cfr10I RCCGGY 2 cut(s) 50, 1672
Cfr13I GGNCC 7 cut(s) 61, 264, 685, 838, 952, 1132, 1540
CseI GACGC 4 cut(s) 56, 80, 92, 1634
Csp6I GTAC 3 cut(s) 559, 1474, 1612
CviAII CATG 4 cut(s) 331, 956, 1030, 1186
CviQI GTAC 3 cut(s) 559, 1474, 1612
DdeI CTNAG 4 cut(s) 22, 369, 1419, 1516
DpnI GATC 3 cut(s) 125, 394, 938
DpnII GATC 3 cut(s) 123, 392, 936
DriI GACNNNNNGTC 1 cut(s) 1174
Eam1104I CTCTTC 2 cut(s) 984, 1250
Eam1105I GACNNNNNGTC 1 cut(s) 1174
EarI CTCTTC 2 cut(s) 984, 1250
EciI GGCGGA 1 cut(s) 498
Eco130I CCWWGG 1 cut(s) 645
Eco24I GRGCYC 1 cut(s) 1051
Eco31I GGTCTC 1 cut(s) 1159
Eco32I GATATC 1 cut(s) 1531
Eco47I GGWCC 5 cut(s) 61, 264, 685, 838, 1132
Eco47III AGCGCT 2 cut(s) 786, 1213
Eco57I CTGAAG 1 cut(s) 410
Eco88I CYCGRG 1 cut(s) 788
EcoO109I RGGNCCY 4 cut(s) 264, 685, 838, 1540
EcoRII CCWGG 2 cut(s) 449, 621
EcoRV GATATC 1 cut(s) 1531
EcoT14I CCWWGG 1 cut(s) 645
EcoT22I ATGCAT 1 cut(s) 1078
EcoT38I GRGCYC 1 cut(s) 1051
ErhI CCWWGG 1 cut(s) 645
FaeI CATG 4 cut(s) 334, 959, 1033, 1189
FalI AAGNNNNNCTT 4 cut(s) 894, 926, 1035, 1067
FaqI GGGAC 6 cut(s) 188, 232, 277, 595, 1020, 1196
FatI CATG 4 cut(s) 330, 955, 1029, 1185
FauI CCCGC 2 cut(s) 649, 718
FblI GTMKAC 1 cut(s) 1085
Fnu4HI GCNGC 4 cut(s) 27, 761, 1340, 1383
FokI GGATG 6 cut(s) 321, 326, 638, 758, 998, 1580
FriOI GRGCYC 1 cut(s) 1051
Fsp4HI GCNGC 4 cut(s) 27, 761, 1340, 1383
FspBI CTAG 1 cut(s) 90
GlaI GCGC 7 cut(s) 754, 786, 878, 1213, 1353, 1485, 1629
GluI GCNGC 4 cut(s) 27, 761, 1340, 1383
GsaI CCCAGC 2 cut(s) 175, 1218
HaeII RGCGCY 4 cut(s) 788, 880, 1215, 1355
HaeIII GGCC 5 cut(s) 138, 377, 733, 954, 1541
HapII CCGG 5 cut(s) 51, 183, 189, 1456, 1673
HgaI GACGC 4 cut(s) 56, 80, 92, 1634
HhaI GCGC 7 cut(s) 755, 787, 879, 1214, 1354, 1486, 1630
Hin1I GRCGYC 2 cut(s) 48, 72
Hin1II CATG 4 cut(s) 334, 959, 1033, 1189
Hin6I GCGC 7 cut(s) 753, 785, 877, 1212, 1352, 1484, 1628
HinP1I GCGC 7 cut(s) 753, 785, 877, 1212, 1352, 1484, 1628
HincII GTYRAC 1 cut(s) 1086
HindII GTYRAC 1 cut(s) 1086
HpaII CCGG 5 cut(s) 51, 183, 189, 1456, 1673
HphI GGTGA 7 cut(s) 65, 122, 176, 349, 395, 496, 1052
Hpy166II GTNNAC 2 cut(s) 615, 1086
Hpy188I TCNGA 5 cut(s) 287, 414, 531, 817, 1374
Hpy188III TCNNGA 6 cut(s) 68, 127, 142, 390, 979, 1534
Hpy8I GTNNAC 2 cut(s) 615, 1086
Hpy99I CGWCG 6 cut(s) 50, 74, 86, 197, 1132, 1331
HpyCH4III ACNGT 6 cut(s) 260, 383, 619, 697, 811, 1132
HpyCH4V TGCA 8 cut(s) 208, 1076, 1121, 1241, 1368, 1389, 1431, 1652
HpyF10VI GCNNNNNNNGC 1 cut(s) 636
HpyF3I CTNAG 4 cut(s) 22, 369, 1419, 1516
Hsp92I GRCGYC 2 cut(s) 48, 72
Hsp92II CATG 4 cut(s) 334, 959, 1033, 1189
HspAI GCGC 7 cut(s) 753, 785, 877, 1212, 1352, 1484, 1628
KflI GGGWCCC 1 cut(s) 264
Kzo9I GATC 3 cut(s) 123, 392, 936
LguI GCTCTTC 1 cut(s) 984
LmnI GCTCC 4 cut(s) 156, 191, 1147, 1669
Lsp1109I GCAGC 3 cut(s) 13, 1351, 1369
LweI GCATC 1 cut(s) 1369
MaeI CTAG 1 cut(s) 90
MaeIII GTNAC 4 cut(s) 53, 254, 820, 1054
MalI GATC 3 cut(s) 125, 394, 938
MboI GATC 3 cut(s) 123, 392, 936
MflI RGATCY 1 cut(s) 392
MhlI GDGCHC 1 cut(s) 1051
MluCI AATT 4 cut(s) 239, 498, 999, 1123
MlyI GAGTC 6 cut(s) 214, 395, 577, 1002, 1184, 1307
MmeI TCCRAC 2 cut(s) 425, 1522
Mph1103I ATGCAT 1 cut(s) 1078
MseI TTAA 5 cut(s) 156, 303, 555, 900, 1464
MspA1I CMGCKG 1 cut(s) 26
MspI CCGG 5 cut(s) 51, 183, 189, 1456, 1673
MspR9I CCNGG 3 cut(s) 183, 451, 623
Mva1269I GAATGC 3 cut(s) 421, 1076, 1243
MvaI CCWGG 2 cut(s) 451, 623
MvnI CGCG 1 cut(s) 1628
MwoI GCNNNNNNNGC 1 cut(s) 636
NciI CCSGG 1 cut(s) 183
NdeII GATC 3 cut(s) 123, 392, 936
NlaIII CATG 4 cut(s) 334, 959, 1033, 1189
NlaIV GGNNCC 7 cut(s) 187, 265, 266, 394, 1116, 1671, 1677
NmeAIII GCCGAG 2 cut(s) 100, 547
NmuCI GTSAC 3 cut(s) 53, 254, 1054
NsiI ATGCAT 1 cut(s) 1078
NspV TTCGAA 1 cut(s) 593
PaeR7I CTCGAG 1 cut(s) 788
PciSI GCTCTTC 1 cut(s) 984
PcsI WCGNNNNNNNCGW 4 cut(s) 78, 410, 969, 1086
PctI GAATGC 3 cut(s) 421, 1076, 1243
PfeI GAWTC 5 cut(s) 245, 321, 406, 526, 1091
PflMI CCANNNNNTGG 2 cut(s) 710, 1504
PfoI TCCNGGA 2 cut(s) 449, 621
PkrI GCNGC 4 cut(s) 28, 762, 1341, 1384
PleI GAGTC 6 cut(s) 214, 394, 577, 1002, 1183, 1307
PpsI GAGTC 6 cut(s) 214, 394, 577, 1002, 1183, 1307
PpuMI RGGWCCY 3 cut(s) 264, 685, 838
Psp5II RGGWCCY 3 cut(s) 264, 685, 838
Psp6I CCWGG 2 cut(s) 449, 621
PspFI CCCAGC 2 cut(s) 171, 1214
PspGI CCWGG 2 cut(s) 449, 621
PspN4I GGNNCC 7 cut(s) 187, 265, 266, 394, 1116, 1671, 1677
PspPI GGNCC 7 cut(s) 61, 264, 685, 838, 952, 1132, 1540
PspPPI RGGWCCY 3 cut(s) 264, 685, 838
PspXI VCTCGAGB 1 cut(s) 788
PsuI RGATCY 1 cut(s) 392
PvuII CAGCTG 1 cut(s) 26
RsaI GTAC 3 cut(s) 560, 1475, 1613
RsaNI GTAC 3 cut(s) 559, 1474, 1612
SalI GTCGAC 1 cut(s) 1084
SapI GCTCTTC 1 cut(s) 984
SaqAI TTAA 5 cut(s) 156, 303, 555, 900, 1464
SatI GCNGC 4 cut(s) 27, 761, 1340, 1383
Sau3AI GATC 3 cut(s) 123, 392, 936
Sau96I GGNCC 7 cut(s) 61, 264, 685, 838, 952, 1132, 1540
SchI GAGTC 6 cut(s) 214, 395, 577, 1002, 1184, 1307
ScrFI CCNGG 3 cut(s) 183, 451, 623
SduI GDGCHC 1 cut(s) 1051
SfaNI GCATC 1 cut(s) 1369
SfcI CTRYAG 1 cut(s) 738
Sfr274I CTCGAG 1 cut(s) 788
SfuI TTCGAA 1 cut(s) 593
SgrAI CRCCGGYG 1 cut(s) 50
SinI GGWCC 5 cut(s) 61, 264, 685, 838, 1132
SlaI CTCGAG 1 cut(s) 788
SmlI CTYRAG 7 cut(s) 101, 140, 473, 776, 788, 1400, 1544
SmoI CTYRAG 7 cut(s) 101, 140, 473, 776, 788, 1400, 1544
Sse9I AATT 4 cut(s) 239, 498, 999, 1123
SsiI CCGC 7 cut(s) 350, 365, 483, 642, 725, 761, 893
SspMI CTAG 1 cut(s) 90
StyD4I CCNGG 3 cut(s) 181, 449, 621
StyI CCWWGG 1 cut(s) 645
TaaI ACNGT 6 cut(s) 260, 383, 619, 697, 811, 1132
TaqII GACCGA 1 cut(s) 1103
TasI AATT 4 cut(s) 239, 498, 999, 1123
TatI WGTACW 2 cut(s) 1473, 1611
TauI GCSGC 1 cut(s) 763
TfiI GAWTC 5 cut(s) 245, 321, 406, 526, 1091
Tru1I TTAA 5 cut(s) 156, 303, 555, 900, 1464
Tru9I TTAA 5 cut(s) 156, 303, 555, 900, 1464
TscAI CASTG 2 cut(s) 220, 762
TseFI GTSAC 3 cut(s) 53, 254, 1054
TseI GCWGC 3 cut(s) 26, 1339, 1382
Tsp45I GTSAC 3 cut(s) 53, 254, 1054
TspDTI ATGAA 9 cut(s) 330, 347, 506, 683, 762, 1002, 1046, 1202, 1673
TspGWI ACGGA 2 cut(s) 246, 998
TspRI CASTG 2 cut(s) 220, 762
Van91I CCANNNNNTGG 2 cut(s) 710, 1504
VpaK11BI GGWCC 5 cut(s) 61, 264, 685, 838, 1132
XapI RAATTY 2 cut(s) 239, 1123
XhoI CTCGAG 1 cut(s) 788
XmiI GTMKAC 1 cut(s) 1085
XspI CTAG 1 cut(s) 90
Zsp2I ATGCAT 1 cut(s) 1078
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.