Rroxscaffold_5G00356460

Peptidyl-prolyl

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0014948
Physical Location & Seq
Reverse (-)
35779166 .. 35782426
3261 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00356460.1

Sequence Viewer

Length: 1701 bp
ATGGAAGACGACTTTGATTTCCCAACCGGCGCCAACCCCGAAGACGTTGACATGGACCTTCCTGAGGAAGACGACGACGCGATCAGCCCAGGCCCGCTCAAGGTCGGCGAAGAGAAGGAGATTGGGAAAAATGGGCTGAAGAAGAAGCTGCTCAAGCAAGGTGAAGGGTGGGAGACGCCTGGCTCCGGCGACGAGGTTGAAGTTCATTATACTGGGACTCTGCTTGATGGCACCAAGTTTGATTCCAGCCGTGATCGGGGGACGCCTTTCAAGTTCAGTCTTGGTCAAGGACAAGTGATCAAGGGATGGGATGAGGGTATTAAGACCATGAAGAAGGGTGAGAATGCAATTTTCACCATACCACCTGAGTTGGCTTATGGCGAGTCTGGATCCCCTCCAACTATTCCTCCCAATGCCACACTCCAGTTTGATGTCGAGTTGCTTTCCTGGACTAGTGTCAAGGACATATGCAAGGATGGCGGAGTTATAAAGAAAATTCTTACTGAAGGGGAGAAATGGGAGAATCCGAAAGACCTTGATGAAGTATTTGTTAAGTACGAGGCTCGACTTGAAGACGGGACTCTTGTTTCAAAATCTGATGGGGTGGAGTTTACTGTTGAAGATGGCTATTTCTGCCCAGCCTTGGCAAAAGCTGTGAAAACAATGAAGAAAAATGAAAAGGTCCATTTGACCGTAAAACCACAATATGGATTTGGTGAGGCTGGAAGACCAGCTGCAGGGGATGAAGGTGCAGTGCCTCCAAATGCTACTCTTGGGATAACCCTAGAGTTGGTCTCGTGGAAGACAGTTTCAGATGTTACAAAGGACAAGAAGGTCCTAAAAAAGGCCTTAAAGGAGGGAGAGGGATATGAGCGTCCTAATGATGGGGCGGTAGTTCAAGTGAAACTTGTTGGGAAGTTACAGGATGGCACTATCTTTATGAAGAAGGGACATGATAATGAGCCATTTGAATTCAAGATAGATGAAGAGCAAGTTATTGATGGACTTGATAGAGCGGTGAAGAGCATGAAGAAAGGGGAGGTGGCGCTGGTCACCATTCAACCTGAATATGCTTTTGGGTCATCTGATTCTGCACAAGAATTGGCCATTGTCCCTGCAAATTCAACTGTGTATTATGAGGTGGAGCTGGTCTCCTTTGTGAAGGAGAAGGAATCTTGGGACATGAACACACAAGAAAAAATTGAAGCGGCTGGTAAGAAGAAGGAAGAAGGCAACACTCTCTTTAAGGCTGCCAAATATGAAAGGGCCTCAAAGAGATATGAAAAGGCTGTGAGATATATAGATTATGACTCAAGCTTCAGTGATGAAGAGAAGCAGCAGGCGAAGGTACTGAAGATTACCTGCAATCTGAATGATGCTGCATGCAAGCTTAAACTTAAACAGTACAAAGATGCTGAAAAGCTCTGCACAAAGGTTCTGGAACTTGACAGTCGGAATGTGAAAGCCTTGTACAGAAGGGCACAAGCCTATATCCAGCTTGTTGATTTGGACTTGGCAGAGCTGGACATCAAGAAGGCACTGGAGATAGACCCAAACAACAAGGACGTGAAACAGGAGTACAAGCTTCTGAAGGAGAAAATTAGAGAGTACAACAAGAAGGATGCACAGTTCTATGGCAATATATTTGCAAAAATGCACAAGCACGACCCTGTTCCAATGACAATTGATAGCAAGGCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04915 map04915
Pfam Domains
Protein Families
FKBP_C TPR_1 TPR_8

Protein Analysis

566

Amino Acids

63.22

Weight (kDa)

5.16

Isoelectric Point (pI)

29.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FKBP_C PF00254 57 - 148 2.5e-38 FKBP-type peptidyl-prolyl cis-trans isomerase
FKBP_C PF00254 174 - 264 6.3e-17 FKBP-type peptidyl-prolyl cis-trans isomerase
FKBP_C PF00254 290 - 384 4.8e-25 FKBP-type peptidyl-prolyl cis-trans isomerase
TPR_19 PF14559 464 - 524 8.9e-06 Tetratricopeptide repeat
TPR_1 PF00515 487 - 520 6.9e-07 Tetratricopeptide repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014948)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G48570
fragaria_vesca FvH4_4g12830
malus_domestica MD04G1022400.v1.1
prunus_persica Prupe.1G172600_v2.0.a1
pyrus_communis pycom04g01940
rosa_chinensis RchiOBHm_Chr4g0412331
rosa_laevigata RLG00000008307
rosa_multiflora Rmu_co8161348.1_g000001 Rmu_sc0010364.1_g000002 Rmu_sc0024446.1_g000002 Rmu_sc0041848.1_g000001
rosa_roxburghii Rroxscaffold_5G00356460
rosa_rugosa Rorug04G0104700
rosa_samantha Rh4AG172300 Rh4CG183200
rosa_wichuraiana Rw4G014400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 488
AasI GACNNNNNNGTC 1 cut(s) 833
Acc36I ACCTGC 1 cut(s) 1370
AccB1I GGYRCC 2 cut(s) 29, 230
AccB7I CCANNNNNTGG 1 cut(s) 707
AccBSI CCGCTC 2 cut(s) 97, 1016
AccII CGCG 1 cut(s) 80
AciI CCGC 5 cut(s) 95, 480, 890, 1016, 1208
AclWI GGATC 2 cut(s) 384, 397
AcoI YGGCCR 1 cut(s) 1104
AcsI RAATTY 3 cut(s) 495, 971, 1120
AcuI CTGAAG 5 cut(s) 158, 525, 1303, 1373, 1610
AcyI GRCGYC 3 cut(s) 30, 176, 263
AfaI GTAC 6 cut(s) 557, 1350, 1406, 1472, 1580, 1610
AhlI ACTAGT 1 cut(s) 452
AjiI CACGTC 1 cut(s) 1567
AjnI CCWGG 3 cut(s) 88, 178, 446
AjuI GAANNNNNNNTTGG 2 cut(s) 1059, 1091
AloI GAACNNNNNNTCC 2 cut(s) 1613, 1645
Alw26I GTCTC 3 cut(s) 167, 799, 1156
AlwI GGATC 2 cut(s) 384, 397
AoxI GGCC 4 cut(s) 91, 846, 1104, 1266
ApeKI GCWGC 5 cut(s) 148, 734, 1250, 1336, 1379
ApoI RAATTY 3 cut(s) 495, 971, 1120
AspLEI GCGC 2 cut(s) 32, 1048
AspS9I GGNCC 5 cut(s) 55, 92, 682, 835, 1266
AsuHPI GGTGA 6 cut(s) 173, 346, 350, 728, 1030, 1045
AvaII GGWCC 3 cut(s) 55, 682, 835
AxyI CCTNAGG 1 cut(s) 63
BaeGI GKGCMC 1 cut(s) 1483
BalI TGGCCA 1 cut(s) 1106
BamHI GGATCC 1 cut(s) 389
BanI GGYRCC 2 cut(s) 29, 230
BauI CACGAG 1 cut(s) 796
BbsI GAAGAC 6 cut(s) 12, 48, 75, 579, 733, 809
BbvI GCAGC 5 cut(s) 135, 721, 1237, 1348, 1366
BccI CCATC 8 cut(s) 221, 300, 470, 593, 617, 878, 920, 995
BceAI ACGGC 1 cut(s) 234
BciT130I CCWGG 3 cut(s) 90, 180, 448
BclI TGATCA 1 cut(s) 297
BcoDI GTCTC 3 cut(s) 167, 799, 1156
BcuI ACTAGT 1 cut(s) 452
BfaI CTAG 2 cut(s) 453, 785
BfmI CTRYAG 1 cut(s) 735
BfoI RGCGCY 2 cut(s) 33, 1049
BfuAI ACCTGC 1 cut(s) 1370
BisI GCNGC 6 cut(s) 149, 735, 1209, 1251, 1337, 1380
BlsI GCNGC 6 cut(s) 150, 736, 1210, 1252, 1338, 1381
Bme1390I CCNGG 3 cut(s) 90, 180, 448
Bme18I GGWCC 3 cut(s) 55, 682, 835
BmgBI CACGTC 1 cut(s) 1567
BmgT120I GGNCC 5 cut(s) 55, 92, 682, 835, 1266
BmiI GGNNCC 4 cut(s) 31, 184, 232, 391
BmrFI CCNGG 3 cut(s) 90, 180, 448
BmrI ACTGGG 1 cut(s) 222
BmsI GCATC 3 cut(s) 1366, 1402, 1612
BmuI ACTGGG 1 cut(s) 222
BoxI GACNNNNGTC 1 cut(s) 455
BpiI GAAGAC 6 cut(s) 12, 48, 75, 579, 733, 809
BplI GAGNNNNNCTC 4 cut(s) 779, 811, 1136, 1168
BpmI CTGGAG 2 cut(s) 407, 1562
BpuEI CTTGAG 3 cut(s) 83, 137, 1297
BsaHI GRCGYC 3 cut(s) 30, 176, 263
BsaI GGTCTC 2 cut(s) 799, 1156
BsaJI CCNNGG 2 cut(s) 88, 642
BsaXI ACNNNNNCTCC 2 cut(s) 391, 421
Bse118I RCCGGY 1 cut(s) 26
Bse1I ACTGG 3 cut(s) 217, 424, 1545
Bse21I CCTNAGG 1 cut(s) 63
BseBI CCWGG 3 cut(s) 90, 180, 448
BseDI CCNNGG 2 cut(s) 88, 642
BseGI GGATG 6 cut(s) 311, 316, 481, 748, 931, 1627
BseMII CTCAG 2 cut(s) 54, 357
BseNI ACTGG 3 cut(s) 217, 424, 1545
BseSI GKGCMC 1 cut(s) 1483
BseXI GCAGC 5 cut(s) 135, 721, 1237, 1348, 1366
BseYI CCCAGC 1 cut(s) 637
BsgI GTGCAG 3 cut(s) 771, 1077, 1411
Bsh1236I CGCG 1 cut(s) 80
BshFI GGCC 4 cut(s) 93, 848, 1106, 1268
BshNI GGYRCC 2 cut(s) 29, 230
BsiSI CCGG 2 cut(s) 27, 186
BslFI GGGAC 6 cut(s) 229, 274, 592, 963, 1097, 1193
BsmAI GTCTC 3 cut(s) 167, 799, 1156
BsmBI CGTCTC 1 cut(s) 167
BsmFI GGGAC 6 cut(s) 229, 274, 592, 963, 1097, 1193
BsmI GAATGC 1 cut(s) 349
BsnI GGCC 4 cut(s) 93, 848, 1106, 1268
Bso31I GGTCTC 2 cut(s) 799, 1156
Bsp1286I GDGCHC 1 cut(s) 1483
Bsp1407I TGTACA 1 cut(s) 1470
Bsp143I GATC 4 cut(s) 81, 253, 297, 389
BspACI CCGC 5 cut(s) 95, 480, 890, 1016, 1208
BspANI GGCC 4 cut(s) 93, 848, 1106, 1268
BspCNI CTCAG 2 cut(s) 55, 358
BspFNI CGCG 1 cut(s) 80
BspLI GGNNCC 4 cut(s) 31, 184, 232, 391
BspMAI CTGCAG 1 cut(s) 739
BspMI ACCTGC 1 cut(s) 1370
BspPI GGATC 2 cut(s) 384, 397
BspQI GCTCTTC 2 cut(s) 981, 1016
BspT107I GGYRCC 2 cut(s) 29, 230
BspTNI GGTCTC 2 cut(s) 799, 1156
BsrBI CCGCTC 2 cut(s) 97, 1016
BsrFI RCCGGY 1 cut(s) 26
BsrGI TGTACA 1 cut(s) 1470
BsrI ACTGG 3 cut(s) 217, 424, 1545
BssAI RCCGGY 1 cut(s) 26
BssECI CCNNGG 2 cut(s) 88, 642
BssMI GATC 4 cut(s) 81, 253, 297, 389
BssNI GRCGYC 3 cut(s) 30, 176, 263
BssSI CACGAG 1 cut(s) 796
BssT1I CCWWGG 1 cut(s) 642
Bst2BI CACGAG 1 cut(s) 796
Bst2UI CCWGG 3 cut(s) 90, 180, 448
Bst4CI ACNGT 7 cut(s) 616, 694, 808, 1129, 1404, 1451, 1629
Bst6I CTCTTC 4 cut(s) 105, 981, 1016, 1323
BstACI GRCGYC 3 cut(s) 30, 176, 263
BstAUI TGTACA 1 cut(s) 1470
BstC8I GCNNGC 4 cut(s) 95, 1341, 1384, 1388
BstDEI CTNAG 2 cut(s) 63, 366
BstEII GGTNACC 1 cut(s) 1051
BstENI CCTNNNNNAGG 2 cut(s) 62, 842
BstF5I GGATG 6 cut(s) 311, 316, 481, 748, 931, 1627
BstFNI CGCG 1 cut(s) 80
BstH2I RGCGCY 2 cut(s) 33, 1049
BstHHI GCGC 2 cut(s) 32, 1048
BstKTI GATC 4 cut(s) 84, 256, 300, 392
BstMAI GTCTC 3 cut(s) 167, 799, 1156
BstMBI GATC 4 cut(s) 81, 253, 297, 389
BstMWI GCNNNNNNNGC 3 cut(s) 154, 477, 633
BstNI CCWGG 3 cut(s) 90, 180, 448
BstNSI RCATGY 1 cut(s) 1386
BstPAI GACNNNNGTC 1 cut(s) 455
BstPI GGTNACC 1 cut(s) 1051
BstSCI CCNGG 3 cut(s) 88, 178, 446
BstSFI CTRYAG 1 cut(s) 735
BstSLI GKGCMC 1 cut(s) 1483
BstUI CGCG 1 cut(s) 80
BstV1I GCAGC 5 cut(s) 135, 721, 1237, 1348, 1366
BstV2I GAAGAC 6 cut(s) 12, 48, 75, 579, 733, 809
BstX2I RGATCY 1 cut(s) 389
BstYI RGATCY 1 cut(s) 389
Bsu36I CCTNAGG 1 cut(s) 63
BsuRI GGCC 4 cut(s) 93, 848, 1106, 1268
BtrI CACGTC 1 cut(s) 1567
BtsCI GGATG 6 cut(s) 311, 316, 481, 748, 931, 1627
BtsI GCAGTG 1 cut(s) 759
BtsIMutI CAGTG 3 cut(s) 759, 1327, 1538
BveI ACCTGC 1 cut(s) 1370
Cac8I GCNNGC 4 cut(s) 95, 1341, 1384, 1388
CfoI GCGC 2 cut(s) 32, 1048
Cfr10I RCCGGY 1 cut(s) 26
Cfr13I GGNCC 5 cut(s) 55, 92, 682, 835, 1266
CseI GACGC 4 cut(s) 86, 184, 271, 863
Csp6I GTAC 6 cut(s) 556, 1349, 1405, 1471, 1579, 1609
CspCI CAANNNNNGTGG 2 cut(s) 351, 386
CviAII CATG 7 cut(s) 52, 328, 953, 1027, 1183, 1383, 1698
CviQI GTAC 6 cut(s) 556, 1349, 1405, 1471, 1579, 1609
DdeI CTNAG 2 cut(s) 63, 366
DinI GGCGCC 1 cut(s) 31
DpnI GATC 4 cut(s) 83, 255, 299, 391
DpnII GATC 4 cut(s) 81, 253, 297, 389
DrdI GACNNNNNNGTC 1 cut(s) 833
DseDI GACNNNNNNGTC 1 cut(s) 833
EaeI YGGCCR 1 cut(s) 1104
Eam1104I CTCTTC 4 cut(s) 105, 981, 1016, 1323
EarI CTCTTC 4 cut(s) 105, 981, 1016, 1323
EciI GGCGGA 1 cut(s) 495
Eco130I CCWWGG 1 cut(s) 642
Eco147I AGGCCT 1 cut(s) 848
Eco31I GGTCTC 2 cut(s) 799, 1156
Eco47I GGWCC 3 cut(s) 55, 682, 835
Eco57I CTGAAG 5 cut(s) 158, 525, 1303, 1373, 1610
Eco81I CCTNAGG 1 cut(s) 63
Eco91I GGTNACC 1 cut(s) 1051
EcoNI CCTNNNNNAGG 2 cut(s) 62, 842
EcoO109I RGGNCCY 2 cut(s) 835, 1266
EcoO65I GGTNACC 1 cut(s) 1051
EcoRI GAATTC 1 cut(s) 971
EcoRII CCWGG 3 cut(s) 88, 178, 446
EcoT14I CCWWGG 1 cut(s) 642
EgeI GGCGCC 1 cut(s) 31
EheI GGCGCC 1 cut(s) 31
ErhI CCWWGG 1 cut(s) 642
Esp3I CGTCTC 1 cut(s) 167
FaeI CATG 7 cut(s) 55, 331, 956, 1030, 1186, 1386, 1701
FalI AAGNNNNNCTT 2 cut(s) 891, 923
FaqI GGGAC 6 cut(s) 229, 274, 592, 963, 1097, 1193
FatI CATG 7 cut(s) 51, 327, 952, 1026, 1182, 1382, 1697
FauI CCCGC 1 cut(s) 102
FauNDI CATATG 1 cut(s) 467
FbaI TGATCA 1 cut(s) 297
Fnu4HI GCNGC 6 cut(s) 149, 735, 1209, 1251, 1337, 1380
FokI GGATG 6 cut(s) 318, 323, 488, 755, 938, 1634
Fsp4HI GCNGC 6 cut(s) 149, 735, 1209, 1251, 1337, 1380
FspBI CTAG 2 cut(s) 453, 785
GlaI GCGC 2 cut(s) 31, 1047
GluI GCNGC 6 cut(s) 149, 735, 1209, 1251, 1337, 1380
GsaI CCCAGC 1 cut(s) 641
GsuI CTGGAG 2 cut(s) 407, 1562
HaeII RGCGCY 2 cut(s) 33, 1049
HaeIII GGCC 4 cut(s) 93, 848, 1106, 1268
HapII CCGG 2 cut(s) 27, 186
HgaI GACGC 4 cut(s) 86, 184, 271, 863
HhaI GCGC 2 cut(s) 32, 1048
Hin1I GRCGYC 3 cut(s) 30, 176, 263
Hin1II CATG 7 cut(s) 55, 331, 956, 1030, 1186, 1386, 1701
Hin6I GCGC 2 cut(s) 30, 1046
HinP1I GCGC 2 cut(s) 30, 1046
HincII GTYRAC 1 cut(s) 49
HindII GTYRAC 1 cut(s) 49
HindIII AAGCTT 3 cut(s) 1315, 1388, 1583
HinfI GANTC 8 cut(s) 217, 242, 383, 523, 580, 1088, 1172, 1310
HpaII CCGG 2 cut(s) 27, 186
HphI GGTGA 6 cut(s) 173, 346, 350, 728, 1030, 1045
Hpy166II GTNNAC 2 cut(s) 49, 612
Hpy188I TCNGA 7 cut(s) 528, 598, 814, 1087, 1371, 1455, 1590
Hpy188III TCNNGA 5 cut(s) 62, 387, 976, 1439, 1531
Hpy8I GTNNAC 2 cut(s) 49, 612
Hpy99I CGWCG 3 cut(s) 77, 80, 194
HpyCH4III ACNGT 7 cut(s) 616, 694, 808, 1129, 1404, 1451, 1629
HpyCH4IV ACGT 2 cut(s) 45, 1566
HpyF10VI GCNNNNNNNGC 3 cut(s) 154, 477, 633
HpyF3I CTNAG 2 cut(s) 63, 366
HpySE526I ACGT 2 cut(s) 45, 1566
Hsp92I GRCGYC 3 cut(s) 30, 176, 263
Hsp92II CATG 7 cut(s) 55, 331, 956, 1030, 1186, 1386, 1701
HspAI GCGC 2 cut(s) 30, 1046
KasI GGCGCC 1 cut(s) 29
Ksp22I TGATCA 1 cut(s) 297
Kzo9I GATC 4 cut(s) 81, 253, 297, 389
LguI GCTCTTC 2 cut(s) 981, 1016
LmnI GCTCC 2 cut(s) 188, 1144
Lsp1109I GCAGC 5 cut(s) 135, 721, 1237, 1348, 1366
LweI GCATC 3 cut(s) 1366, 1402, 1612
MaeI CTAG 2 cut(s) 453, 785
MaeII ACGT 2 cut(s) 45, 1566
MaeIII GTNAC 3 cut(s) 817, 918, 1051
MalI GATC 4 cut(s) 83, 255, 299, 391
MbiI CCGCTC 2 cut(s) 97, 1016
MboI GATC 4 cut(s) 81, 253, 297, 389
MfeI CAATTG 1 cut(s) 1683
MflI RGATCY 1 cut(s) 389
MhlI GDGCHC 1 cut(s) 1483
MlsI TGGCCA 1 cut(s) 1106
MluCI AATT 8 cut(s) 348, 495, 971, 1100, 1120, 1200, 1599, 1683
MluNI TGGCCA 1 cut(s) 1106
Mly113I GGCGCC 1 cut(s) 30
MlyI GAGTC 4 cut(s) 211, 392, 574, 1304
MmeI TCCRAC 2 cut(s) 422, 1433
Mox20I TGGCCA 1 cut(s) 1106
MscI TGGCCA 1 cut(s) 1106
MseI TTAA 6 cut(s) 321, 552, 851, 1245, 1392, 1398
MslI CAYNNNNRTG 1 cut(s) 957
Msp20I TGGCCA 1 cut(s) 1106
MspA1I CMGCKG 1 cut(s) 734
MspI CCGG 2 cut(s) 27, 186
MspR9I CCNGG 3 cut(s) 90, 180, 448
MunI CAATTG 1 cut(s) 1683
Mva1269I GAATGC 1 cut(s) 349
MvaI CCWGG 3 cut(s) 90, 180, 448
MvnI CGCG 1 cut(s) 80
MwoI GCNNNNNNNGC 3 cut(s) 154, 477, 633
NarI GGCGCC 1 cut(s) 30
NdeI CATATG 1 cut(s) 467
NdeII GATC 4 cut(s) 81, 253, 297, 389
NlaIII CATG 7 cut(s) 55, 331, 956, 1030, 1186, 1386, 1701
NlaIV GGNNCC 4 cut(s) 31, 184, 232, 391
NmuCI GTSAC 1 cut(s) 1051
NspI RCATGY 1 cut(s) 1386
PaeI GCATGC 1 cut(s) 1386
PceI AGGCCT 1 cut(s) 848
PciSI GCTCTTC 2 cut(s) 981, 1016
PctI GAATGC 1 cut(s) 349
PfeI GAWTC 4 cut(s) 242, 523, 1088, 1172
PflMI CCANNNNNTGG 1 cut(s) 707
PfoI TCCNGGA 1 cut(s) 446
PkrI GCNGC 6 cut(s) 150, 736, 1210, 1252, 1338, 1381
PleI GAGTC 4 cut(s) 211, 391, 574, 1304
PluTI GGCGCC 1 cut(s) 33
PpsI GAGTC 4 cut(s) 211, 391, 574, 1304
PpuMI RGGWCCY 1 cut(s) 835
PshAI GACNNNNGTC 1 cut(s) 455
PsiI TTATAA 1 cut(s) 488
Psp5II RGGWCCY 1 cut(s) 835
Psp6I CCWGG 3 cut(s) 88, 178, 446
PspEI GGTNACC 1 cut(s) 1051
PspFI CCCAGC 1 cut(s) 637
PspGI CCWGG 3 cut(s) 88, 178, 446
PspN4I GGNNCC 4 cut(s) 31, 184, 232, 391
PspPI GGNCC 5 cut(s) 55, 92, 682, 835, 1266
PspPPI RGGWCCY 1 cut(s) 835
PstI CTGCAG 1 cut(s) 739
PsuI RGATCY 1 cut(s) 389
PvuII CAGCTG 1 cut(s) 734
RsaI GTAC 6 cut(s) 557, 1350, 1406, 1472, 1580, 1610
RsaNI GTAC 6 cut(s) 556, 1349, 1405, 1471, 1579, 1609
RseI CAYNNNNRTG 1 cut(s) 957
SapI GCTCTTC 2 cut(s) 981, 1016
SaqAI TTAA 6 cut(s) 321, 552, 851, 1245, 1392, 1398
SatI GCNGC 6 cut(s) 149, 735, 1209, 1251, 1337, 1380
Sau3AI GATC 4 cut(s) 81, 253, 297, 389
Sau96I GGNCC 5 cut(s) 55, 92, 682, 835, 1266
SchI GAGTC 4 cut(s) 211, 392, 574, 1304
ScrFI CCNGG 3 cut(s) 90, 180, 448
SduI GDGCHC 1 cut(s) 1483
SfaNI GCATC 3 cut(s) 1366, 1402, 1612
SfcI CTRYAG 1 cut(s) 735
SfoI GGCGCC 1 cut(s) 31
SinI GGWCC 3 cut(s) 55, 682, 835
SmiMI CAYNNNNRTG 1 cut(s) 957
SmlI CTYRAG 3 cut(s) 98, 152, 1312
SmoI CTYRAG 3 cut(s) 98, 152, 1312
SpeI ACTAGT 1 cut(s) 452
SphI GCATGC 1 cut(s) 1386
Sse9I AATT 8 cut(s) 348, 495, 971, 1100, 1120, 1200, 1599, 1683
SseBI AGGCCT 1 cut(s) 848
SsiI CCGC 5 cut(s) 95, 480, 890, 1016, 1208
SspDI GGCGCC 1 cut(s) 29
SspMI CTAG 2 cut(s) 453, 785
StuI AGGCCT 1 cut(s) 848
StyD4I CCNGG 3 cut(s) 88, 178, 446
StyI CCWWGG 1 cut(s) 642
TaaI ACNGT 7 cut(s) 616, 694, 808, 1129, 1404, 1451, 1629
TaiI ACGT 2 cut(s) 48, 1569
TaqI TCGA 2 cut(s) 435, 565
TasI AATT 8 cut(s) 348, 495, 971, 1100, 1120, 1200, 1599, 1683
TatI WGTACW 4 cut(s) 1404, 1470, 1578, 1608
TauI GCSGC 1 cut(s) 1211
TfiI GAWTC 4 cut(s) 242, 523, 1088, 1172
Tru1I TTAA 6 cut(s) 321, 552, 851, 1245, 1392, 1398
Tru9I TTAA 6 cut(s) 321, 552, 851, 1245, 1392, 1398
TscAI CASTG 3 cut(s) 759, 1327, 1545
TseFI GTSAC 1 cut(s) 1051
TseI GCWGC 5 cut(s) 148, 734, 1250, 1336, 1379
Tsp45I GTSAC 1 cut(s) 1051
TspRI CASTG 3 cut(s) 759, 1327, 1545
Van91I CCANNNNNTGG 1 cut(s) 707
VpaK11BI GGWCC 3 cut(s) 55, 682, 835
XagI CCTNNNNNAGG 2 cut(s) 62, 842
XapI RAATTY 3 cut(s) 495, 971, 1120
XceI RCATGY 1 cut(s) 1386
XspI CTAG 2 cut(s) 453, 785
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.