FvH4_4g13160

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0009999
Physical Location & Seq
Forward (+)
16772762 .. 16776624
3863 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g13160.t3

Sequence Viewer

Length: 1833 bp
ATGCCAGTGTCTCGCTATCTCCACCAACTGAAGCTCTGCGCAAGAAACCACACACCTTCCACCGCCAAAACCCTTCACGCTCAGCTCATCAAAACCGCCCTCCACCAATGCGTCCCTTTACCCAACACCCTCTTACACGTCTACGCCAAATGCGGCCTCCTCCAAGACGCCCTCCACCTGTTCGACGAAATGCCTCACCGAGACCACGTCACCTGGGCTTCACTCCTCACCGCTCTCAACCAAGCCAACCTCTCCCACCGCACTCTCTCCATCTTCCCCACCATGTTTCAGTCAGACTCTTTGCTTCCGGACCACTTCGTTTTCGCTAGCCTCGTCAAGGCCTGCTCTAGCTTGGGAGCTCTTAGGCAAGGGAAGCAGGTTCACGCGCGGTTTATGTTGTCGCCGTTTTGTGGGGATGATGTTGCGAAGTCGTCTCTGGTTGACATGTATGTGAAATGTGGGTTGCCGGATAATGCTCGTGCGGTTTTTGATTCGAGTGGGGAGAAGAGTGTGGTTGCTTGGACGGCGTTGGTTTCCGGGTATGCTAGAAGTGGGAGGAAGAAGGATGCTTTGGAGATGTTTGGGAAGATGCCGGTGAAGAGCTTGTTTTCGTGGACTGCGTTGATATCCGGGTTGGTGCAGAGTGGAAATGGTGTTGATGCATTGTACTTGTTTATTGAGATGAGAAGAGAGAGGGTTGATATTGTAGACCCGTTGGTTTTGTCAAGCACGGTTGGCGCTTGTGCTAATTTGGCAGTGTTGGAGCTTGGCAAGCAGGTTCATGGGCTGGTTATTCGTCTTGGTTATGGTTCGTGCTTGTTTGTTAGTAATGCACTGGTGGATATGTATGCGAAATGTAGTGATATTTTAGCTGCTAGGGATATTTTCGGTGGAATGCAGCGAAAAGATGTGGTTTCTTGGACTTCCATAATTGTTGGGGCGGCTCAGCATGGTCGAGCTGTGGAAGCATTGACTTTATATGATGGGATGGTGGAAGCTGGAATTAAGCCTAATGAAGTTACGTTCGTTGGACTTATTTATGCTTGCAGCCATGTTGGTTTTGTTAGCAAAGGACGTGCCATTTTCAGATCCATGATTGAGGATTATGGAATTCGTCCCTGTCTGCAGCACTATACATGTTTCTTGGATCTTCTTAGTCGCTCTGGGCATCTTGTTGAAGCTTTAAATGTTATTAGTTCAATGCCGTTTGAGCCTGATGAACCCACTTGGGCAGCTTTACTAAGTGCTTGCAAGCATCATGGTGATACCCAAATGGGTATCAGGGTTGCTGATCATCTTTTAAGCTTAAACCCAGAAGACCCTTCAAGTTATATATTGTTATCTAATGTCTATGCTGGTGCCGGTATGTGGCAAAATGTAGCGAAAGTGAGGACATTGATGACAGAGAGAGAAGTTAAGAAAAATCCTGGTTACAGTTCCATTGATGTTGGAAAGGAAAGCCAAGTGTTTTATGCTGGAGAGACGTCTCATCCTCTGAAGGATGACATATTCGGTTTGCTTAAAGAGTTGGATGCAGAGATGAGGAAAAGAGGCTATGTTCCCGACAGTAGCTTTGTTTTACATGACATGGAGCAGCAAGAGAAGGAAAGGCAGCTTTTTTGGCATAGTGAGAGATTGGCATTGGCTTATGGGCTTCTGAAGGCTGTTCCAGGGACACCTATCCGGATAGTGAAAAATCTTCGTGTTTGTGGAGATTGTCACACGGTGTTGAAATTCATAAGCAGTATTGTGAAGAGGGATATTATTGTTAGAGATGCCACTAGATACCACCATTTTAGTAAGGGAGAATGTTCGTGCAATGACTTTTGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DYW_deaminase PPR

Protein Analysis

611

Amino Acids

67.61

Weight (kDa)

8.22

Isoelectric Point (pI)

35.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR PF01535 203 - 232 7.1e-06 PPR repeat
PPR_2 PF13041 302 - 350 4.8e-10 PPR repeat family
PPR_long PF17177 320 - 425 1.8e-07 Pentacotripeptide-repeat region of PRORP
E_motif PF20431 421 - 481 4.3e-17 E motif
DYW_deaminase PF14432 518 - 610 4e-42 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1487
Acc16I TGCGCA 1 cut(s) 40
Acc36I ACCTGC 2 cut(s) 367, 766
AccB1I GGYRCC 1 cut(s) 1358
AccBSI CCGCTC 1 cut(s) 233
AccI GTMKAC 2 cut(s) 141, 708
AccII CGCG 2 cut(s) 386, 388
AccIII TCCGGA 2 cut(s) 307, 1683
AciI CCGC 8 cut(s) 63, 96, 153, 231, 259, 388, 482, 941
AclWI GGATC 2 cut(s) 1083, 1155
AcsI RAATTY 2 cut(s) 1110, 1733
AcuI CTGAAG 3 cut(s) 50, 1517, 1679
AcyI GRCGYC 2 cut(s) 168, 1484
AdeI CACNNNGTG 1 cut(s) 1726
AfaI GTAC 1 cut(s) 668
AfiI CCNNNNNNNGG 3 cut(s) 337, 410, 1368
AflIII ACRYGT 3 cut(s) 136, 444, 1136
AgsI TTSAA 4 cut(s) 1178, 1200, 1326, 1732
AjiI CACGTC 3 cut(s) 139, 208, 1076
AjnI CCWGG 3 cut(s) 212, 1426, 1669
AjuI GAANNNNNNNTTGG 2 cut(s) 554, 586
Alw21I GWGCWC 1 cut(s) 361
Alw26I GTCTC 5 cut(s) 15, 195, 438, 1475, 1491
AlwI GGATC 2 cut(s) 1083, 1155
Aor13HI TCCGGA 2 cut(s) 307, 1683
AoxI GGCC 2 cut(s) 154, 339
ApeKI GCWGC 7 cut(s) 872, 898, 1047, 1126, 1232, 1594, 1612
ApoI RAATTY 2 cut(s) 1110, 1733
ArsI GACNNNNNNTTYG 2 cut(s) 1556, 1588
AspLEI GCGC 3 cut(s) 41, 388, 740
AspS9I GGNCC 1 cut(s) 310
AsuC2I CCSGG 2 cut(s) 538, 631
AsuHPI GGTGA 5 cut(s) 188, 202, 220, 607, 1274
AsuNHI GCTAGC 1 cut(s) 326
AvaII GGWCC 1 cut(s) 310
BanI GGYRCC 1 cut(s) 1358
BanII GRGCYC 1 cut(s) 361
BauI CACGAG 1 cut(s) 477
BbsI GAAGAC 1 cut(s) 1323
Bbv12I GWGCWC 1 cut(s) 361
BbvI GCAGC 7 cut(s) 859, 910, 1059, 1138, 1244, 1606, 1624
BccI CCATC 3 cut(s) 278, 977, 982
BceAI ACGGC 3 cut(s) 388, 540, 1189
BciT130I CCWGG 3 cut(s) 214, 1428, 1671
BclI TGATCA 1 cut(s) 1291
BcnI CCSGG 2 cut(s) 538, 631
BcoDI GTCTC 5 cut(s) 15, 195, 438, 1475, 1491
BfaI CTAG 5 cut(s) 327, 348, 546, 876, 1782
BfmI CTRYAG 1 cut(s) 1124
BfoI RGCGCY 1 cut(s) 741
BfuAI ACCTGC 2 cut(s) 367, 766
BisI GCNGC 9 cut(s) 154, 873, 899, 942, 1048, 1127, 1233, 1595, 1613
BlpI GCTNAGC 2 cut(s) 81, 945
BlsI GCNGC 9 cut(s) 155, 874, 900, 943, 1049, 1128, 1234, 1596, 1614
Bme1390I CCNGG 5 cut(s) 214, 538, 631, 1428, 1671
Bme18I GGWCC 1 cut(s) 310
BmgBI CACGTC 3 cut(s) 139, 208, 1076
BmgT120I GGNCC 1 cut(s) 310
BmiI GGNNCC 1 cut(s) 1360
BmrFI CCNGG 5 cut(s) 214, 538, 631, 1428, 1671
BmsI GCATC 7 cut(s) 556, 579, 649, 1177, 1264, 1522, 1765
BmtI GCTAGC 1 cut(s) 330
BpiI GAAGAC 1 cut(s) 1323
BpmI CTGGAG 1 cut(s) 1497
Bpu1102I GCTNAGC 2 cut(s) 81, 945
BpuMI CCSGG 2 cut(s) 538, 631
BsaHI GRCGYC 2 cut(s) 168, 1484
BsaI GGTCTC 1 cut(s) 195
BsaJI CCNNGG 2 cut(s) 213, 1670
BsaWI WCCGGW 2 cut(s) 307, 1683
Bsc4I CCNNNNNNNGG 3 cut(s) 337, 410, 1368
Bse118I RCCGGY 2 cut(s) 592, 1361
Bse1I ACTGG 2 cut(s) 5, 840
Bse3DI GCAATG 1 cut(s) 1825
BseAI TCCGGA 2 cut(s) 307, 1683
BseBI CCWGG 3 cut(s) 214, 1428, 1671
BseDI CCNNGG 2 cut(s) 213, 1670
BseGI GGATG 6 cut(s) 421, 571, 993, 1489, 1507, 1537
BseLI CCNNNNNNNGG 3 cut(s) 337, 410, 1368
BseMI GCAATG 1 cut(s) 1825
BseMII CTCAG 2 cut(s) 95, 959
BseNI ACTGG 2 cut(s) 5, 840
BseRI GAGGAG 2 cut(s) 149, 215
BseXI GCAGC 7 cut(s) 859, 910, 1059, 1138, 1244, 1606, 1624
BsgI GTGCAG 1 cut(s) 659
Bsh1236I CGCG 2 cut(s) 386, 388
BshFI GGCC 2 cut(s) 156, 341
BshNI GGYRCC 1 cut(s) 1358
BsiHKAI GWGCWC 1 cut(s) 361
BsiSI CCGG 7 cut(s) 308, 467, 537, 593, 630, 1362, 1684
BslFI GGGAC 3 cut(s) 98, 1101, 1687
BslI CCNNNNNNNGG 3 cut(s) 337, 410, 1368
BsmAI GTCTC 5 cut(s) 15, 195, 438, 1475, 1491
BsmBI CGTCTC 3 cut(s) 438, 1475, 1491
BsmFI GGGAC 3 cut(s) 98, 1101, 1687
BsmI GAATGC 1 cut(s) 900
BsnI GGCC 2 cut(s) 156, 341
Bso31I GGTCTC 1 cut(s) 195
Bsp1286I GDGCHC 1 cut(s) 361
Bsp13I TCCGGA 2 cut(s) 307, 1683
Bsp143I GATC 3 cut(s) 1088, 1147, 1291
Bsp1720I GCTNAGC 2 cut(s) 81, 945
BspACI CCGC 8 cut(s) 63, 96, 153, 231, 259, 388, 482, 941
BspANI GGCC 2 cut(s) 156, 341
BspCNI CTCAG 2 cut(s) 94, 958
BspEI TCCGGA 2 cut(s) 307, 1683
BspFNI CGCG 2 cut(s) 386, 388
BspLI GGNNCC 1 cut(s) 1360
BspMAI CTGCAG 1 cut(s) 1128
BspMI ACCTGC 2 cut(s) 367, 766
BspOI GCTAGC 1 cut(s) 330
BspPI GGATC 2 cut(s) 1083, 1155
BspQI GCTCTTC 1 cut(s) 593
BspT107I GGYRCC 1 cut(s) 1358
BspTNI GGTCTC 1 cut(s) 195
BsrBI CCGCTC 1 cut(s) 233
BsrDI GCAATG 1 cut(s) 1825
BsrFI RCCGGY 2 cut(s) 592, 1361
BsrI ACTGG 2 cut(s) 5, 840
BssAI RCCGGY 2 cut(s) 592, 1361
BssECI CCNNGG 2 cut(s) 213, 1670
BssMI GATC 3 cut(s) 1088, 1147, 1291
BssNI GRCGYC 2 cut(s) 168, 1484
BssSI CACGAG 1 cut(s) 477
Bst2BI CACGAG 1 cut(s) 477
Bst2UI CCWGG 3 cut(s) 214, 1428, 1671
Bst4CI ACNGT 4 cut(s) 733, 1436, 1568, 1726
Bst6I CTCTTC 4 cut(s) 500, 593, 682, 1748
BstACI GRCGYC 2 cut(s) 168, 1484
BstC8I GCNNGC 6 cut(s) 328, 343, 773, 1045, 1249, 1253
BstDEI CTNAG 5 cut(s) 81, 362, 945, 1154, 1241
BstENI CCTNNNNNAGG 1 cut(s) 335
BstF5I GGATG 6 cut(s) 421, 571, 993, 1489, 1507, 1537
BstFNI CGCG 2 cut(s) 386, 388
BstH2I RGCGCY 1 cut(s) 741
BstHHI GCGC 3 cut(s) 41, 388, 740
BstKTI GATC 3 cut(s) 1091, 1150, 1294
BstMAI GTCTC 5 cut(s) 15, 195, 438, 1475, 1491
BstMBI GATC 3 cut(s) 1088, 1147, 1291
BstMWI GCNNNNNNNGC 8 cut(s) 373, 524, 735, 752, 772, 965, 1210, 1621
BstNI CCWGG 3 cut(s) 214, 1428, 1671
BstNSI RCATGY 2 cut(s) 448, 1140
BstSCI CCNGG 5 cut(s) 212, 536, 629, 1426, 1669
BstSFI CTRYAG 1 cut(s) 1124
BstUI CGCG 2 cut(s) 386, 388
BstV1I GCAGC 7 cut(s) 859, 910, 1059, 1138, 1244, 1606, 1624
BstV2I GAAGAC 1 cut(s) 1323
BstX2I RGATCY 2 cut(s) 1088, 1147
BstYI RGATCY 2 cut(s) 1088, 1147
BsuRI GGCC 2 cut(s) 156, 341
BtrI CACGTC 3 cut(s) 139, 208, 1076
BtsCI GGATG 6 cut(s) 421, 571, 993, 1489, 1507, 1537
BtsI GCAGTG 1 cut(s) 762
BtsIMutI CAGTG 3 cut(s) 12, 762, 833
BveI ACCTGC 2 cut(s) 367, 766
Cac8I GCNNGC 6 cut(s) 328, 343, 773, 1045, 1249, 1253
CfoI GCGC 3 cut(s) 41, 388, 740
Cfr10I RCCGGY 2 cut(s) 592, 1361
Cfr13I GGNCC 1 cut(s) 310
CseI GACGC 2 cut(s) 100, 176
Csp6I GTAC 1 cut(s) 667
CviQI GTAC 1 cut(s) 667
DdeI CTNAG 5 cut(s) 81, 362, 945, 1154, 1241
DpnI GATC 3 cut(s) 1090, 1149, 1293
DpnII GATC 3 cut(s) 1088, 1147, 1291
DraI TTTAAA 1 cut(s) 1185
DraIII CACNNNGTG 1 cut(s) 1726
Eam1104I CTCTTC 4 cut(s) 500, 593, 682, 1748
EarI CTCTTC 4 cut(s) 500, 593, 682, 1748
Ecl136II GAGCTC 1 cut(s) 359
Eco147I AGGCCT 1 cut(s) 341
Eco24I GRGCYC 1 cut(s) 361
Eco31I GGTCTC 1 cut(s) 195
Eco32I GATATC 1 cut(s) 627
Eco47I GGWCC 1 cut(s) 310
Eco53kI GAGCTC 1 cut(s) 359
Eco57I CTGAAG 3 cut(s) 50, 1517, 1679
EcoICRI GAGCTC 1 cut(s) 359
EcoNI CCTNNNNNAGG 1 cut(s) 335
EcoRI GAATTC 1 cut(s) 1110
EcoRII CCWGG 3 cut(s) 212, 1426, 1669
EcoRV GATATC 1 cut(s) 627
EcoT22I ATGCAT 1 cut(s) 664
EcoT38I GRGCYC 1 cut(s) 361
Esp3I CGTCTC 3 cut(s) 438, 1475, 1491
FaqI GGGAC 3 cut(s) 98, 1101, 1687
FbaI TGATCA 1 cut(s) 1291
FblI GTMKAC 2 cut(s) 141, 708
Fnu4HI GCNGC 9 cut(s) 154, 873, 899, 942, 1048, 1127, 1233, 1595, 1613
FokI GGATG 6 cut(s) 428, 578, 1000, 1476, 1514, 1544
FriOI GRGCYC 1 cut(s) 361
Fsp4HI GCNGC 9 cut(s) 154, 873, 899, 942, 1048, 1127, 1233, 1595, 1613
FspBI CTAG 5 cut(s) 327, 348, 546, 876, 1782
FspI TGCGCA 1 cut(s) 40
GlaI GCGC 3 cut(s) 40, 387, 739
GluI GCNGC 9 cut(s) 154, 873, 899, 942, 1048, 1127, 1233, 1595, 1613
GsuI CTGGAG 1 cut(s) 1497
HaeII RGCGCY 1 cut(s) 741
HaeIII GGCC 2 cut(s) 156, 341
HapII CCGG 7 cut(s) 308, 467, 537, 593, 630, 1362, 1684
HgaI GACGC 2 cut(s) 100, 176
HhaI GCGC 3 cut(s) 41, 388, 740
Hin1I GRCGYC 2 cut(s) 168, 1484
Hin6I GCGC 3 cut(s) 39, 386, 738
HinP1I GCGC 3 cut(s) 39, 386, 738
HincII GTYRAC 1 cut(s) 442
HindII GTYRAC 1 cut(s) 442
HindIII AAGCTT 2 cut(s) 1179, 1303
HinfI GANTC 2 cut(s) 296, 491
HpaII CCGG 7 cut(s) 308, 467, 537, 593, 630, 1362, 1684
HphI GGTGA 5 cut(s) 188, 202, 220, 607, 1274
Hpy166II GTNNAC 5 cut(s) 142, 382, 442, 615, 709
Hpy188I TCNGA 4 cut(s) 295, 1088, 1497, 1659
Hpy188III TCNNGA 3 cut(s) 308, 1562, 1684
Hpy8I GTNNAC 5 cut(s) 142, 382, 442, 615, 709
Hpy99I CGWCG 1 cut(s) 188
HpyAV CCTTC 7 cut(s) 66, 83, 556, 1332, 1492, 1597, 1654
HpyCH4III ACNGT 4 cut(s) 733, 1436, 1568, 1726
HpyCH4IV ACGT 5 cut(s) 138, 207, 1022, 1075, 1484
HpyCH4V TGCA 9 cut(s) 640, 662, 833, 898, 1047, 1126, 1251, 1535, 1818
HpyF10VI GCNNNNNNNGC 8 cut(s) 373, 524, 735, 752, 772, 965, 1210, 1621
HpyF3I CTNAG 5 cut(s) 81, 362, 945, 1154, 1241
HpySE526I ACGT 5 cut(s) 138, 207, 1022, 1075, 1484
Hsp92I GRCGYC 2 cut(s) 168, 1484
HspAI GCGC 3 cut(s) 39, 386, 738
Kpn2I TCCGGA 2 cut(s) 307, 1683
Ksp22I TGATCA 1 cut(s) 1291
Kzo9I GATC 3 cut(s) 1088, 1147, 1291
LguI GCTCTTC 1 cut(s) 593
LmnI GCTCC 3 cut(s) 356, 763, 1591
Lsp1109I GCAGC 7 cut(s) 859, 910, 1059, 1138, 1244, 1606, 1624
LweI GCATC 7 cut(s) 556, 579, 649, 1177, 1264, 1522, 1765
MaeI CTAG 5 cut(s) 327, 348, 546, 876, 1782
MaeII ACGT 5 cut(s) 138, 207, 1022, 1075, 1484
MaeIII GTNAC 4 cut(s) 208, 1018, 1430, 1718
MalI GATC 3 cut(s) 1090, 1149, 1293
MbiI CCGCTC 1 cut(s) 233
MboI GATC 3 cut(s) 1088, 1147, 1291
MflI RGATCY 2 cut(s) 1088, 1147
MhlI GDGCHC 1 cut(s) 361
MluCI AATT 5 cut(s) 748, 930, 1002, 1110, 1733
MlyI GAGTC 1 cut(s) 290
MmeI TCCRAC 4 cut(s) 741, 1009, 1429, 1509
Mph1103I ATGCAT 1 cut(s) 664
MroI TCCGGA 2 cut(s) 307, 1683
MseI TTAA 6 cut(s) 1005, 1184, 1301, 1307, 1416, 1521
MslI CAYNNNNRTG 2 cut(s) 449, 1260
MspI CCGG 7 cut(s) 308, 467, 537, 593, 630, 1362, 1684
MspR9I CCNGG 5 cut(s) 214, 538, 631, 1428, 1671
Mva1269I GAATGC 1 cut(s) 900
MvaI CCWGG 3 cut(s) 214, 1428, 1671
MvnI CGCG 2 cut(s) 386, 388
MwoI GCNNNNNNNGC 8 cut(s) 373, 524, 735, 752, 772, 965, 1210, 1621
NciI CCSGG 2 cut(s) 538, 631
NdeII GATC 3 cut(s) 1088, 1147, 1291
NheI GCTAGC 1 cut(s) 326
NlaIV GGNNCC 1 cut(s) 1360
NmuCI GTSAC 2 cut(s) 208, 1718
NsbI TGCGCA 1 cut(s) 40
NsiI ATGCAT 1 cut(s) 664
NspI RCATGY 2 cut(s) 448, 1140
PceI AGGCCT 1 cut(s) 341
PciI ACATGT 2 cut(s) 444, 1136
PciSI GCTCTTC 1 cut(s) 593
PcsI WCGNNNNNNNCGW 2 cut(s) 330, 617
PctI GAATGC 1 cut(s) 900
PfeI GAWTC 1 cut(s) 491
PflFI GACNNNGTC 1 cut(s) 206
PkrI GCNGC 9 cut(s) 155, 874, 900, 943, 1049, 1128, 1234, 1596, 1614
PleI GAGTC 1 cut(s) 290
PpsI GAGTC 1 cut(s) 290
PscI ACATGT 2 cut(s) 444, 1136
Psp124BI GAGCTC 1 cut(s) 361
Psp6I CCWGG 3 cut(s) 212, 1426, 1669
PspGI CCWGG 3 cut(s) 212, 1426, 1669
PspN4I GGNNCC 1 cut(s) 1360
PspPI GGNCC 1 cut(s) 310
PstI CTGCAG 1 cut(s) 1128
PsuI RGATCY 2 cut(s) 1088, 1147
PsyI GACNNNGTC 1 cut(s) 206
RsaI GTAC 1 cut(s) 668
RsaNI GTAC 1 cut(s) 667
RseI CAYNNNNRTG 2 cut(s) 449, 1260
SacI GAGCTC 1 cut(s) 361
SapI GCTCTTC 1 cut(s) 593
SaqAI TTAA 6 cut(s) 1005, 1184, 1301, 1307, 1416, 1521
SatI GCNGC 9 cut(s) 154, 873, 899, 942, 1048, 1127, 1233, 1595, 1613
Sau3AI GATC 3 cut(s) 1088, 1147, 1291
Sau96I GGNCC 1 cut(s) 310
SchI GAGTC 1 cut(s) 290
ScrFI CCNGG 5 cut(s) 214, 538, 631, 1428, 1671
SduI GDGCHC 1 cut(s) 361
SfaNI GCATC 7 cut(s) 556, 579, 649, 1177, 1264, 1522, 1765
SfcI CTRYAG 1 cut(s) 1124
SinI GGWCC 1 cut(s) 310
SmiMI CAYNNNNRTG 2 cut(s) 449, 1260
Sse9I AATT 5 cut(s) 748, 930, 1002, 1110, 1733
SseBI AGGCCT 1 cut(s) 341
SsiI CCGC 8 cut(s) 63, 96, 153, 231, 259, 388, 482, 941
SspMI CTAG 5 cut(s) 327, 348, 546, 876, 1782
SstI GAGCTC 1 cut(s) 361
StuI AGGCCT 1 cut(s) 341
StyD4I CCNGG 5 cut(s) 212, 536, 629, 1426, 1669
TaaI ACNGT 4 cut(s) 733, 1436, 1568, 1726
TaiI ACGT 5 cut(s) 141, 210, 1025, 1078, 1487
TaqI TCGA 3 cut(s) 183, 494, 955
TasI AATT 5 cut(s) 748, 930, 1002, 1110, 1733
TatI WGTACW 1 cut(s) 666
TauI GCSGC 2 cut(s) 156, 944
TfiI GAWTC 1 cut(s) 491
Tru1I TTAA 6 cut(s) 1005, 1184, 1301, 1307, 1416, 1521
Tru9I TTAA 6 cut(s) 1005, 1184, 1301, 1307, 1416, 1521
TscAI CASTG 3 cut(s) 12, 762, 840
TseFI GTSAC 2 cut(s) 208, 1718
TseI GCWGC 7 cut(s) 872, 898, 1047, 1126, 1232, 1594, 1612
Tsp45I GTSAC 2 cut(s) 208, 1718
TspDTI ATGAA 4 cut(s) 770, 1029, 1233, 1726
TspRI CASTG 3 cut(s) 12, 762, 840
Tth111I GACNNNGTC 1 cut(s) 206
VpaK11BI GGWCC 1 cut(s) 310
XagI CCTNNNNNAGG 1 cut(s) 335
XapI RAATTY 2 cut(s) 1110, 1733
XceI RCATGY 2 cut(s) 448, 1140
XmiI GTMKAC 2 cut(s) 141, 708
XspI CTAG 5 cut(s) 327, 348, 546, 876, 1782
ZraI GACGTC 1 cut(s) 1485
Zsp2I ATGCAT 1 cut(s) 664
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.