MD04G1018600.v1.1

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr04
OG0009999
Physical Location & Seq
Reverse (-)
2152800 .. 2154661
1862 bp
Loading structure...
UTR
Exon/CDS
Intron
MD04G1018600.v1.1.491

Sequence Viewer

Length: 1833 bp
ATGCCAGCGTCTCACTTCCTACACCAACTGCAACTCTGCGCCCGACGCCGCGTGCCTTTTACCGCCAAAAACCTCCACGCCCAAATCATCAAAACAGGCCTCCATCTATGCGTGCCCTTACCCAACACCCTCTTGGATGCCTACGGGAAATGCGGTCTAGTCGAAGAAGCGCGCCGGGTGTTCGACGAAATGCCTCAACGAGACCTTGTCTCATGGGCTTCAATTTTTACCGCCCACAACCTAGCCAACGTCCCCCACCGAACCCTCGCCATGCTCCCTGCAATGTTCGAGTCTGATGGTTTGCAGCCGGACCATTTTGTGTTTGCTTGCATTGTCAAGGCCTGCTCTGGTTTGGAAGCTGTTAGACAAGGCAAGCAAGTGCATGGCCGATTTTTGGTGTCCCCGTTTCGCTATGATGATGTGGTTAAGTCGTCCCTGGTTGATATGTATGCGAAATGTGGATTGCCTGATAATGCTCGTGCGGTTTTTGATTCAATTGTGTCCAGAAGTCCGGTTTCTTGGACTGCTCTGATTTCGGGGTATGCCAGGAGTGGAAGGAAATCAGATGCTATCGAAATGTTTGAGAGGTTACCTCTTAAGAATTTGTTTTGTTGGACTGCTTTGATATCTGGGTTGGTACAGAGTGGACACGGCGTTGATGCATTTTATTTGTTTATTGAAATGAGGAGAGACGGGGTTGATATAGTGGACCCATTAGTTCTCTCCAGCATTGTTGGAGCTTCTGCTAATTTGGCAGTGTTGGAGCTTGGAAAGCAGGTTCATGGTCTAGTTATTGGTCTTGGCTATGAGTCTTGCTTGTTTATTAGTAATGCACTAGTTGATATGTATGCAAAATGTAGTGACATTTTAGCTGCTAAGGGTATTTTTGCTCGAATGCATCGAAGAGATGTAGTTTCTTGGACTTCTATAATTGTTGGGGCAGCTCAGCACGGGCGAGCTGAGGAAGCTTTGACTTTATATGATCAGATGATTGCAGCCGGAATAAGGCCAAATCAAGTTACCTTTGTTGGATTGATTTATGCGTGTAGCCATGTTGGTTTAGTTAGCAAAGGACGTGCTCTTTTCAGATCTATGATTGAGGATTACGGGATTAGCCCCTCCCTGCAGCACTATACATGCTTTTTGGATCTTCTTAGTCGCTCGGGGCACCTTGATGAAGCTTCGAATGTTATTGATTCAATGCCGTTTGAGCCGGATGAACCCACTTGGGCAGCTTTGTTAAGTGCTTGCAGACATCATGGAGAAACCCAAATGGGAATCAGGGTTGCCGATCATCTTTTAAGCTTAAAACCAGAAGACCCTTCAAGTTACATACTGTTGTCTAATGTCTATGCCGGTGCACGTATGTGGGAAAACGTAGCAGAAGTGAGAAAGTTGATGGTTGCTAGAGAAGTTAAGAAGAAGCCTGGTTATAGTTCCATTGGCATTGGAAAGGAAAGCCAAGTCTTTTACGCTGGAGAGACATCTCATCCTATGAAGGATGAGATTTTCGGTTTGCTCAAGGGGTTAGATGCAGAGATGAGGAGAAGAGGCTATGTGCCTGACAGTAGCTTTGTTTTACATGAAATGGAGGACCAAGAGAAGGAAAGGCAGCTCTTTTGGCACAGCGAGAGGTTGGCTGTGGCGTATGGGCTGCTTAAGGCTGTTCCGGGGACTGCTATTCGGATAGTAAAAAATCTTCGTGTCTGCGGAGATTGTCATACTGTATTGAATTTCATAAGCAGCATTGTGAAGAGGGACATCATTGTTCGAGATGCCAGCCGATACCATCATTTTACTGACGGGAAATGTTCGTGCAATGACTTCTGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DYW_deaminase PPR

Protein Analysis

611

Amino Acids

67.88

Weight (kDa)

7.6

Isoelectric Point (pI)

45.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR PF01535 42 - 68 1.5e-06 PPR repeat
PPR PF01535 204 - 233 7.3e-06 PPR repeat
PPR_2 PF13041 302 - 350 1.5e-10 PPR repeat family
PPR_long PF17177 319 - 425 7.9e-09 Pentacotripeptide-repeat region of PRORP
E_motif PF20431 422 - 481 1e-15 E motif
DYW_deaminase PF14432 518 - 610 1.2e-42 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 766
AccB1I GGYRCC 1 cut(s) 1167
AccII CGCG 2 cut(s) 51, 172
AciI CCGC 6 cut(s) 49, 63, 153, 231, 482, 1710
AclWI GGATC 1 cut(s) 1155
AcoI YGGCCR 1 cut(s) 385
AcsI RAATTY 2 cut(s) 601, 1732
AcyI GRCGYC 1 cut(s) 46
AfaI GTAC 1 cut(s) 639
AfiI CCNNNNNNNGG 3 cut(s) 394, 1005, 1603
AflII CTTAAG 2 cut(s) 596, 1658
AgsI TTSAA 6 cut(s) 222, 495, 680, 1200, 1326, 1732
AhlI ACTAGT 1 cut(s) 835
AjiI CACGTC 1 cut(s) 1076
AjnI CCWGG 3 cut(s) 435, 545, 1426
AleI CACNNNNGTG 1 cut(s) 1366
AloI GAACNNNNNNTCC 2 cut(s) 762, 794
Alw21I GWGCWC 2 cut(s) 1081, 1363
Alw26I GTCTC 5 cut(s) 15, 195, 214, 684, 1475
Alw44I GTGCAC 1 cut(s) 1359
AlwI GGATC 1 cut(s) 1155
Ama87I CYCGRG 1 cut(s) 1162
AoxI GGCC 4 cut(s) 97, 339, 385, 1007
ApaLI GTGCAC 1 cut(s) 1359
ApeKI GCWGC 9 cut(s) 304, 872, 941, 995, 1126, 1232, 1612, 1654, 1743
ApoI RAATTY 2 cut(s) 601, 1732
ArsI GACNNNNNNTTYG 2 cut(s) 1556, 1588
AspLEI GCGC 3 cut(s) 41, 172, 174
AspS9I GGNCC 3 cut(s) 310, 709, 1594
AsuC2I CCSGG 2 cut(s) 176, 1671
AsuII TTCGAA 1 cut(s) 1184
AvaI CYCGRG 1 cut(s) 1162
AvaII GGWCC 3 cut(s) 310, 709, 1594
BaeGI GKGCMC 3 cut(s) 117, 1170, 1363
BanI GGYRCC 1 cut(s) 1167
BarI GAAGNNNNNNTAC 2 cut(s) 1683, 1715
BauI CACGAG 1 cut(s) 477
BbsI GAAGAC 1 cut(s) 1323
Bbv12I GWGCWC 2 cut(s) 1081, 1363
BbvCI CCTCAGC 1 cut(s) 960
BbvI GCAGC 9 cut(s) 316, 859, 953, 1007, 1138, 1244, 1624, 1641, 1755
BccI CCATC 4 cut(s) 111, 290, 1393, 1797
BceAI ACGGC 2 cut(s) 667, 1189
BciT130I CCWGG 3 cut(s) 437, 547, 1428
BclI TGATCA 1 cut(s) 982
BcnI CCSGG 2 cut(s) 176, 1671
BcoDI GTCTC 5 cut(s) 15, 195, 214, 684, 1475
BcuI ACTAGT 1 cut(s) 835
BfaI CTAG 5 cut(s) 158, 242, 788, 836, 1407
BfmI CTRYAG 1 cut(s) 1124
BfrI CTTAAG 2 cut(s) 596, 1658
BfuAI ACCTGC 1 cut(s) 766
BglII AGATCT 1 cut(s) 1088
BlpI GCTNAGC 1 cut(s) 945
Bme1390I CCNGG 5 cut(s) 176, 437, 547, 1428, 1671
Bme18I GGWCC 3 cut(s) 310, 709, 1594
BmeT110I CYCGRG 1 cut(s) 1162
BmgBI CACGTC 1 cut(s) 1076
BmgT120I GGNCC 3 cut(s) 310, 709, 1594
BmiI GGNNCC 2 cut(s) 711, 1169
BmrFI CCNGG 5 cut(s) 176, 437, 547, 1428, 1671
BmsI GCATC 6 cut(s) 127, 556, 649, 907, 1522, 1765
BpiI GAAGAC 1 cut(s) 1323
BplI GAGNNNNNCTC 2 cut(s) 577, 609
BpmI CTGGAG 2 cut(s) 709, 1497
Bpu10I CCTNAGC 2 cut(s) 876, 960
Bpu1102I GCTNAGC 1 cut(s) 945
Bpu14I TTCGAA 1 cut(s) 1184
BpuEI CTTGAG 1 cut(s) 1505
BpuMI CCSGG 2 cut(s) 176, 1671
BsaAI YACGTR 1 cut(s) 1364
BsaHI GRCGYC 1 cut(s) 46
BsaI GGTCTC 1 cut(s) 195
BsaJI CCNNGG 2 cut(s) 435, 1670
BsaWI WCCGGW 1 cut(s) 511
Bsc4I CCNNNNNNNGG 3 cut(s) 394, 1005, 1603
Bse118I RCCGGY 1 cut(s) 1355
Bse3DI GCAATG 2 cut(s) 288, 1825
BseBI CCWGG 3 cut(s) 437, 547, 1428
BseDI CCNNGG 2 cut(s) 435, 1670
BseGI GGATG 4 cut(s) 142, 1222, 1489, 1507
BseLI CCNNNNNNNGG 3 cut(s) 394, 1005, 1603
BseMI GCAATG 2 cut(s) 288, 1825
BseMII CTCAG 2 cut(s) 951, 959
BsePI GCGCGC 1 cut(s) 170
BseRI GAGGAG 2 cut(s) 700, 1558
BseSI GKGCMC 3 cut(s) 117, 1170, 1363
BseXI GCAGC 9 cut(s) 316, 859, 953, 1007, 1138, 1244, 1624, 1641, 1755
Bsh1236I CGCG 2 cut(s) 51, 172
BshFI GGCC 4 cut(s) 99, 341, 387, 1009
BshNI GGYRCC 1 cut(s) 1167
BsiHKAI GWGCWC 2 cut(s) 1081, 1363
BsiHKCI CYCGRG 1 cut(s) 1162
BsiSI CCGG 7 cut(s) 175, 308, 512, 999, 1214, 1356, 1670
BslFI GGGAC 5 cut(s) 236, 385, 418, 1687, 1772
BslI CCNNNNNNNGG 3 cut(s) 394, 1005, 1603
BsmAI GTCTC 5 cut(s) 15, 195, 214, 684, 1475
BsmBI CGTCTC 2 cut(s) 15, 684
BsmFI GGGAC 5 cut(s) 236, 385, 418, 1687, 1772
BsmI GAATGC 1 cut(s) 900
BsnI GGCC 4 cut(s) 99, 341, 387, 1009
Bso31I GGTCTC 1 cut(s) 195
BsoBI CYCGRG 1 cut(s) 1162
Bsp119I TTCGAA 1 cut(s) 1184
Bsp1286I GDGCHC 4 cut(s) 117, 1081, 1170, 1363
Bsp143I GATC 4 cut(s) 982, 1088, 1147, 1291
Bsp1720I GCTNAGC 1 cut(s) 945
BspACI CCGC 6 cut(s) 49, 63, 153, 231, 482, 1710
BspANI GGCC 4 cut(s) 99, 341, 387, 1009
BspCNI CTCAG 2 cut(s) 952, 958
BspFNI CGCG 2 cut(s) 51, 172
BspLI GGNNCC 2 cut(s) 711, 1169
BspMAI CTGCAG 1 cut(s) 1128
BspMI ACCTGC 1 cut(s) 766
BspPI GGATC 1 cut(s) 1155
BspT104I TTCGAA 1 cut(s) 1184
BspT107I GGYRCC 1 cut(s) 1167
BspTI CTTAAG 2 cut(s) 596, 1658
BspTNI GGTCTC 1 cut(s) 195
BsrDI GCAATG 2 cut(s) 288, 1825
BsrFI RCCGGY 1 cut(s) 1355
BssAI RCCGGY 1 cut(s) 1355
BssECI CCNNGG 2 cut(s) 435, 1670
BssHII GCGCGC 1 cut(s) 170
BssMI GATC 4 cut(s) 982, 1088, 1147, 1291
BssNI GRCGYC 1 cut(s) 46
BssSI CACGAG 1 cut(s) 477
Bst2BI CACGAG 1 cut(s) 477
Bst2UI CCWGG 3 cut(s) 437, 547, 1428
Bst4CI ACNGT 3 cut(s) 1338, 1568, 1726
Bst6I CTCTTC 3 cut(s) 898, 1543, 1748
BstACI GRCGYC 1 cut(s) 46
BstAFI CTTAAG 2 cut(s) 596, 1658
BstBAI YACGTR 1 cut(s) 1364
BstBI TTCGAA 1 cut(s) 1184
BstDEI CTNAG 4 cut(s) 876, 945, 960, 1154
BstEII GGTNACC 1 cut(s) 588
BstF5I GGATG 4 cut(s) 142, 1222, 1489, 1507
BstFNI CGCG 2 cut(s) 51, 172
BstHHI GCGC 3 cut(s) 41, 172, 174
BstKTI GATC 4 cut(s) 985, 1091, 1150, 1294
BstMAI GTCTC 5 cut(s) 15, 195, 214, 684, 1475
BstMBI GATC 4 cut(s) 982, 1088, 1147, 1291
BstMWI GCNNNNNNNGC 6 cut(s) 45, 752, 772, 965, 1210, 1621
BstNI CCWGG 3 cut(s) 437, 547, 1428
BstNSI RCATGY 1 cut(s) 1140
BstPI GGTNACC 1 cut(s) 588
BstSCI CCNGG 5 cut(s) 174, 435, 545, 1426, 1669
BstSFI CTRYAG 1 cut(s) 1124
BstSLI GKGCMC 3 cut(s) 117, 1170, 1363
BstUI CGCG 2 cut(s) 51, 172
BstV1I GCAGC 9 cut(s) 316, 859, 953, 1007, 1138, 1244, 1624, 1641, 1755
BstV2I GAAGAC 1 cut(s) 1323
BstX2I RGATCY 2 cut(s) 1088, 1147
BstYI RGATCY 2 cut(s) 1088, 1147
BsuRI GGCC 4 cut(s) 99, 341, 387, 1009
BtrI CACGTC 1 cut(s) 1076
BtsCI GGATG 4 cut(s) 142, 1222, 1489, 1507
BtsI GCAGTG 1 cut(s) 762
BtsIMutI CAGTG 1 cut(s) 762
BveI ACCTGC 1 cut(s) 766
CfoI GCGC 3 cut(s) 41, 172, 174
Cfr10I RCCGGY 1 cut(s) 1355
Cfr13I GGNCC 3 cut(s) 310, 709, 1594
CseI GACGC 1 cut(s) 54
Csp6I GTAC 1 cut(s) 638
CviAII CATG 8 cut(s) 213, 271, 383, 782, 1052, 1137, 1259, 1583
CviQI GTAC 1 cut(s) 638
DdeI CTNAG 4 cut(s) 876, 945, 960, 1154
DpnI GATC 4 cut(s) 984, 1090, 1149, 1293
DpnII GATC 4 cut(s) 982, 1088, 1147, 1291
EaeI YGGCCR 1 cut(s) 385
Eam1104I CTCTTC 3 cut(s) 898, 1543, 1748
EarI CTCTTC 3 cut(s) 898, 1543, 1748
Eco147I AGGCCT 2 cut(s) 99, 341
Eco31I GGTCTC 1 cut(s) 195
Eco32I GATATC 1 cut(s) 627
Eco47I GGWCC 3 cut(s) 310, 709, 1594
Eco88I CYCGRG 1 cut(s) 1162
Eco91I GGTNACC 1 cut(s) 588
EcoO65I GGTNACC 1 cut(s) 588
EcoRII CCWGG 3 cut(s) 435, 545, 1426
EcoRV GATATC 1 cut(s) 627
EcoT22I ATGCAT 2 cut(s) 664, 900
Esp3I CGTCTC 2 cut(s) 15, 684
FaeI CATG 8 cut(s) 216, 274, 386, 785, 1055, 1140, 1262, 1586
FaqI GGGAC 5 cut(s) 236, 385, 418, 1687, 1772
FatI CATG 8 cut(s) 212, 270, 382, 781, 1051, 1136, 1258, 1582
FbaI TGATCA 1 cut(s) 982
FokI GGATG 4 cut(s) 149, 1229, 1476, 1514
FspBI CTAG 5 cut(s) 158, 242, 788, 836, 1407
GlaI GCGC 3 cut(s) 40, 171, 173
GsuI CTGGAG 2 cut(s) 709, 1497
HaeIII GGCC 4 cut(s) 99, 341, 387, 1009
HapII CCGG 7 cut(s) 175, 308, 512, 999, 1214, 1356, 1670
HgaI GACGC 1 cut(s) 54
HhaI GCGC 3 cut(s) 41, 172, 174
Hin1I GRCGYC 1 cut(s) 46
Hin1II CATG 8 cut(s) 216, 274, 386, 785, 1055, 1140, 1262, 1586
Hin6I GCGC 3 cut(s) 39, 170, 172
HinP1I GCGC 3 cut(s) 39, 170, 172
HindIII AAGCTT 3 cut(s) 966, 1179, 1303
HinfI GANTC 5 cut(s) 290, 491, 809, 1196, 1278
HpaII CCGG 7 cut(s) 175, 308, 512, 999, 1214, 1356, 1670
Hpy166II GTNNAC 3 cut(s) 647, 709, 1361
Hpy188I TCNGA 6 cut(s) 295, 531, 565, 987, 1088, 1686
Hpy188III TCNNGA 2 cut(s) 504, 1772
Hpy8I GTNNAC 3 cut(s) 647, 709, 1361
Hpy99I CGWCG 2 cut(s) 48, 188
HpyAV CCTTC 4 cut(s) 549, 1332, 1492, 1597
HpyCH4III ACNGT 3 cut(s) 1338, 1568, 1726
HpyCH4IV ACGT 4 cut(s) 249, 1075, 1363, 1377
HpyF10VI GCNNNNNNNGC 6 cut(s) 45, 752, 772, 965, 1210, 1621
HpyF3I CTNAG 4 cut(s) 876, 945, 960, 1154
HpySE526I ACGT 4 cut(s) 249, 1075, 1363, 1377
Hsp92I GRCGYC 1 cut(s) 46
Hsp92II CATG 8 cut(s) 216, 274, 386, 785, 1055, 1140, 1262, 1586
HspAI GCGC 3 cut(s) 39, 170, 172
Ksp22I TGATCA 1 cut(s) 982
Kzo9I GATC 4 cut(s) 982, 1088, 1147, 1291
LmnI GCTCC 3 cut(s) 279, 737, 763
Lsp1109I GCAGC 9 cut(s) 316, 859, 953, 1007, 1138, 1244, 1624, 1641, 1755
LweI GCATC 6 cut(s) 127, 556, 649, 907, 1522, 1765
MaeI CTAG 5 cut(s) 158, 242, 788, 836, 1407
MaeII ACGT 4 cut(s) 249, 1075, 1363, 1377
MaeIII GTNAC 4 cut(s) 588, 860, 1018, 1328
MalI GATC 4 cut(s) 984, 1090, 1149, 1293
MboI GATC 4 cut(s) 982, 1088, 1147, 1291
MboII GAAGA 8 cut(s) 176, 915, 1142, 1328, 1432, 1560, 1691, 1765
MfeI CAATTG 1 cut(s) 495
MflI RGATCY 2 cut(s) 1088, 1147
MhlI GDGCHC 4 cut(s) 117, 1081, 1170, 1363
MluCI AATT 6 cut(s) 222, 495, 601, 748, 930, 1732
MlyI GAGTC 2 cut(s) 299, 818
MmeI TCCRAC 4 cut(s) 593, 715, 741, 1009
Mph1103I ATGCAT 2 cut(s) 664, 900
MseI TTAA 7 cut(s) 426, 597, 1241, 1301, 1307, 1416, 1659
MslI CAYNNNNRTG 2 cut(s) 1173, 1366
MspCI CTTAAG 2 cut(s) 596, 1658
MspI CCGG 7 cut(s) 175, 308, 512, 999, 1214, 1356, 1670
MspR9I CCNGG 5 cut(s) 176, 437, 547, 1428, 1671
MunI CAATTG 1 cut(s) 495
Mva1269I GAATGC 1 cut(s) 900
MvaI CCWGG 3 cut(s) 437, 547, 1428
MvnI CGCG 2 cut(s) 51, 172
MwoI GCNNNNNNNGC 6 cut(s) 45, 752, 772, 965, 1210, 1621
NciI CCSGG 2 cut(s) 176, 1671
NdeII GATC 4 cut(s) 982, 1088, 1147, 1291
NlaIII CATG 8 cut(s) 216, 274, 386, 785, 1055, 1140, 1262, 1586
NlaIV GGNNCC 2 cut(s) 711, 1169
NmuCI GTSAC 1 cut(s) 860
NsiI ATGCAT 2 cut(s) 664, 900
NspI RCATGY 1 cut(s) 1140
NspV TTCGAA 1 cut(s) 1184
OliI CACNNNNGTG 1 cut(s) 1366
PauI GCGCGC 1 cut(s) 170
PceI AGGCCT 2 cut(s) 99, 341
PcsI WCGNNNNNNNCGW 1 cut(s) 898
PctI GAATGC 1 cut(s) 900
PfeI GAWTC 3 cut(s) 491, 1196, 1278
PflFI GACNNNGTC 1 cut(s) 206
PleI GAGTC 2 cut(s) 298, 817
PpsI GAGTC 2 cut(s) 298, 817
Ppu21I YACGTR 1 cut(s) 1364
Psp6I CCWGG 3 cut(s) 435, 545, 1426
PspEI GGTNACC 1 cut(s) 588
PspGI CCWGG 3 cut(s) 435, 545, 1426
PspN4I GGNNCC 2 cut(s) 711, 1169
PspPI GGNCC 3 cut(s) 310, 709, 1594
PstI CTGCAG 1 cut(s) 1128
PsuI RGATCY 2 cut(s) 1088, 1147
PsyI GACNNNGTC 1 cut(s) 206
PteI GCGCGC 1 cut(s) 170
RsaI GTAC 1 cut(s) 639
RsaNI GTAC 1 cut(s) 638
RseI CAYNNNNRTG 2 cut(s) 1173, 1366
SaqAI TTAA 7 cut(s) 426, 597, 1241, 1301, 1307, 1416, 1659
Sau3AI GATC 4 cut(s) 982, 1088, 1147, 1291
Sau96I GGNCC 3 cut(s) 310, 709, 1594
SchI GAGTC 2 cut(s) 299, 818
ScrFI CCNGG 5 cut(s) 176, 437, 547, 1428, 1671
SduI GDGCHC 4 cut(s) 117, 1081, 1170, 1363
SfaNI GCATC 6 cut(s) 127, 556, 649, 907, 1522, 1765
SfcI CTRYAG 1 cut(s) 1124
SfuI TTCGAA 1 cut(s) 1184
SinI GGWCC 3 cut(s) 310, 709, 1594
SmiMI CAYNNNNRTG 2 cut(s) 1173, 1366
SmlI CTYRAG 3 cut(s) 596, 1520, 1658
SmoI CTYRAG 3 cut(s) 596, 1520, 1658
SpeI ACTAGT 1 cut(s) 835
Sse9I AATT 6 cut(s) 222, 495, 601, 748, 930, 1732
SseBI AGGCCT 2 cut(s) 99, 341
SsiI CCGC 6 cut(s) 49, 63, 153, 231, 482, 1710
SspMI CTAG 5 cut(s) 158, 242, 788, 836, 1407
StuI AGGCCT 2 cut(s) 99, 341
StyD4I CCNGG 5 cut(s) 174, 435, 545, 1426, 1669
TaaI ACNGT 3 cut(s) 1338, 1568, 1726
TaiI ACGT 4 cut(s) 252, 1078, 1366, 1380
TaqI TCGA 8 cut(s) 162, 183, 288, 573, 892, 901, 1184, 1771
TasI AATT 6 cut(s) 222, 495, 601, 748, 930, 1732
TauI GCSGC 1 cut(s) 51
TfiI GAWTC 3 cut(s) 491, 1196, 1278
Tru1I TTAA 7 cut(s) 426, 597, 1241, 1301, 1307, 1416, 1659
Tru9I TTAA 7 cut(s) 426, 597, 1241, 1301, 1307, 1416, 1659
TscAI CASTG 1 cut(s) 762
TseFI GTSAC 1 cut(s) 860
TseI GCWGC 9 cut(s) 304, 872, 941, 995, 1126, 1232, 1612, 1654, 1743
Tsp45I GTSAC 1 cut(s) 860
TspDTI ATGAA 6 cut(s) 770, 1191, 1233, 1511, 1599, 1726
TspRI CASTG 1 cut(s) 762
Tth111I GACNNNGTC 1 cut(s) 206
Vha464I CTTAAG 2 cut(s) 596, 1658
VneI GTGCAC 1 cut(s) 1359
VpaK11BI GGWCC 3 cut(s) 310, 709, 1594
XapI RAATTY 2 cut(s) 601, 1732
XceI RCATGY 1 cut(s) 1140
XcmI CCANNNNNNNNNTGG 1 cut(s) 130
XspI CTAG 5 cut(s) 158, 242, 788, 836, 1407
Zsp2I ATGCAT 2 cut(s) 664, 900
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.