Rh4BG178000

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4B
OG0009999
Physical Location & Seq
Forward (+)
31595325 .. 31597377
2053 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4BG178000.1

Sequence Viewer

Length: 1791 bp
ATGCATGCCGGTGTCTCTCACTATCTACACCAACTAAAGCTCTGCGCAAGAAGCCAGACATCTTCCACAGCCAAAAAACTCCATGCCCAAATCATCAAAGCAGCTCTACATCTCTGCCCGCCCTTACCCAACACCCTCTTAGACGCCTACGGCAAATGCGGTCTCGTCGGAGACGCGCTCCACCTGTTCGACGAAATGCCTCACAGAGACCACGTCTCATGGGCTTCACTTCTCACGGCACACAACCAAGCCAGCCTCCCCCACCGGACTCTCTCCATGTTCCGCATTATGTATGAGTCGGACTCTTTGCTGCCGGACCATTTTGTTTTTGCTAGTGTTGCCAAGGCATGCTGTAGCTTGGGAGCTATTAGGCAAGGCAAGCAAGTTCATGCACGCTTTATGTTATCGCAGTTTTGCGAGGATGATGTTGTCAAGTCTTCTCTGGTTGATATGTATGCGAAATGTGGATTGCCTGATAATGCTCGTGCGGTTTTTGATTCGATTTCGAAGAGGAGTGTGGTTTCTTGGACTGCTTTGATTTCCGGGTATGCTAGAAGTGGAAGGAAATTGGATGCTTTGGAAATGTTTGAGAAGCTACCGGTTAAGAGTTTGTTTTCGTGGACTGCTTTGATATCTGGATTGGTGCAAAGTGGAAATGGTGTTGATGCACTGTACTTGTTTATTGAAATGAGAAGAGAAAGGGTTGATATAGTGGATCCATTGGTTCTTTCGAGCACTGTTGGAGCTTGTGCTAATTTGGCAGTCTTGGAGCTTGGAAAGCAGGTTCATGGCCTGGTTATTGGTCTTGGGTATGGGTCGTGCTTGTTTATTAGTAATGCACTGGTGGATATGTATGCAAAATGTAGTGACATTTTAGCTGCGAAGGATATTTTCGGTGGAATGCAGCGAAAAGATGTAGTTTCTTGGACTTCCTTAATTGTTGGGGCGGCTCAGCATGGGCGAGCTGAGGAAGCATTGACTTTATATGATGGCATGGTTGGAGCTGGAATTAAGCCTAATGAAGTTACCTTTGTTGGACTGATTTATGCTTGTAGCCATGTTGGTTTTGTTAGCAAAGGACGTGCCATTTTCAGATCCATGATTGAAGATTATGGAATTCGTCCCTGTCTGCAGCACTATACATGTTTCTTGGATCTTCTTAGTCGCTCTGGGCATCTTGGTGAAGCTTTAAATGTTATTAATTCAATGCCGTTTGAGCCTGATGAACCCACTTGGGCAGCTTTACTAAGTGCTTGCAAGCATCATGGAGATACCCAAATGGGTATCAGGGTTGCTGATCATCTTTTAAGCTTAGACCCAGAAGATCCTTCAAGTTATATACTGTTATCTAATGTCTACGCTGGTGCCGGTATGTGGGAAAACGTAGCAAAAGTGAGAAAGTTGATGACAGCGAGGGAAGTAAAGAAGAATCCAGGTTACAGTTCCATCGACATTGGAAAGGAAAGCCAAGTGTTTTATGCTGGGGAGACATCTCATCCTATGAAGGATGAGATATTCGATTTGCTTAAAGAGTTGGATGCAGAGATGAGGAAAAGAGGCTATGTTCCCGACAGTAGCTTTGTTTTACATGACATGGAGCAGCAAGAGAAAGAAAAGCAGCTGTTTTGGCATAGTGAGAGGCTGGCATTGGCTTATGGGCTTCTGAAGGCTGTTCCAGGGACACCTATCCGGATAGTGAAAAATCTTCGTGTTTGTGGAGATTGTCACACGACATTGGATCTGCTTTTGGGTTTTGCTCAGGTTCATATAACTAACAGATTTGAACACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DYW_deaminase PPR

Protein Analysis

596

Amino Acids

65.8

Weight (kDa)

6.81

Isoelectric Point (pI)

35.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR PF01535 205 - 234 6.9e-06 PPR repeat
PPR_2 PF13041 304 - 352 2e-10 PPR repeat family
PPR_long PF17177 321 - 427 1.8e-08 Pentacotripeptide-repeat region of PRORP
E_motif PF20431 423 - 483 1.3e-17 E motif
DYW_deaminase PF14432 520 - 590 6e-23 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 46
Acc36I ACCTGC 1 cut(s) 772
AccB1I GGYRCC 1 cut(s) 1364
AccI GTMKAC 1 cut(s) 1356
AccII CGCG 1 cut(s) 176
AccIII TCCGGA 1 cut(s) 1689
AciI CCGC 5 cut(s) 119, 159, 283, 488, 947
AclWI GGATC 6 cut(s) 710, 723, 1089, 1161, 1319, 1746
AcsI RAATTY 1 cut(s) 1116
AcuI CTGAAG 1 cut(s) 1685
AcyI GRCGYC 1 cut(s) 144
AfaI GTAC 1 cut(s) 674
AfiI CCNNNNNNNGG 1 cut(s) 1374
AflIII ACRYGT 1 cut(s) 1142
AgeI ACCGGT 1 cut(s) 598
AgsI TTSAA 5 cut(s) 686, 1106, 1206, 1332, 1784
AjiI CACGTC 2 cut(s) 214, 1082
AjnI CCWGG 3 cut(s) 792, 1432, 1675
AloI GAACNNNNNNTCC 2 cut(s) 768, 800
Alw21I GWGCWC 1 cut(s) 737
Alw26I GTCTC 6 cut(s) 19, 165, 167, 201, 220, 1481
AlwI GGATC 6 cut(s) 710, 723, 1089, 1161, 1319, 1746
Aor13HI TCCGGA 1 cut(s) 1689
AoxI GGCC 1 cut(s) 790
ApeKI GCWGC 8 cut(s) 101, 310, 878, 904, 1132, 1238, 1600, 1618
ApoI RAATTY 1 cut(s) 1116
ArsI GACNNNNNNTTYG 2 cut(s) 1562, 1594
AseI ATTAAT 1 cut(s) 1200
AsiGI ACCGGT 1 cut(s) 598
AspLEI GCGC 2 cut(s) 47, 178
AspS9I GGNCC 1 cut(s) 316
AsuC2I CCSGG 1 cut(s) 544
AsuHPI GGTGA 1 cut(s) 1193
AsuII TTCGAA 1 cut(s) 506
AvaII GGWCC 1 cut(s) 316
BamHI GGATCC 1 cut(s) 715
BanI GGYRCC 1 cut(s) 1364
BauI CACGAG 1 cut(s) 483
BbsI GAAGAC 1 cut(s) 429
Bbv12I GWGCWC 1 cut(s) 737
BbvCI CCTCAGC 1 cut(s) 966
BbvI GCAGC 8 cut(s) 113, 297, 865, 916, 1144, 1250, 1612, 1630
BccI CCATC 2 cut(s) 983, 1454
BceAI ACGGC 3 cut(s) 166, 252, 1195
BciT130I CCWGG 3 cut(s) 794, 1434, 1677
BclI TGATCA 1 cut(s) 1297
BcnI CCSGG 1 cut(s) 544
BcoDI GTCTC 6 cut(s) 19, 165, 167, 201, 220, 1481
BfaI CTAG 3 cut(s) 333, 552, 1789
BfmI CTRYAG 2 cut(s) 352, 1130
BfuAI ACCTGC 1 cut(s) 772
BisI GCNGC 9 cut(s) 102, 311, 879, 905, 948, 1133, 1239, 1601, 1619
BlpI GCTNAGC 1 cut(s) 951
BlsI GCNGC 9 cut(s) 103, 312, 880, 906, 949, 1134, 1240, 1602, 1620
Bme1390I CCNGG 4 cut(s) 544, 794, 1434, 1677
Bme18I GGWCC 1 cut(s) 316
BmgBI CACGTC 2 cut(s) 214, 1082
BmgT120I GGNCC 1 cut(s) 316
BmiI GGNNCC 2 cut(s) 717, 1366
BmrFI CCNGG 4 cut(s) 544, 794, 1434, 1677
BmsI GCATC 5 cut(s) 562, 655, 1183, 1270, 1528
BpiI GAAGAC 1 cut(s) 429
BplI GAGNNNNNCTC 4 cut(s) 162, 194, 287, 319
Bpu10I CCTNAGC 2 cut(s) 966, 1758
Bpu1102I GCTNAGC 1 cut(s) 951
Bpu14I TTCGAA 1 cut(s) 506
BpuMI CCSGG 1 cut(s) 544
BsaHI GRCGYC 1 cut(s) 144
BsaI GGTCTC 2 cut(s) 167, 201
BsaJI CCNNGG 2 cut(s) 342, 1676
BsaWI WCCGGW 3 cut(s) 264, 598, 1689
Bsc4I CCNNNNNNNGG 1 cut(s) 1374
Bse118I RCCGGY 3 cut(s) 8, 598, 1367
Bse1I ACTGG 1 cut(s) 846
BseAI TCCGGA 1 cut(s) 1689
BseBI CCWGG 3 cut(s) 794, 1434, 1677
BseDI CCNNGG 2 cut(s) 342, 1676
BseGI GGATG 5 cut(s) 427, 577, 1495, 1513, 1543
BseLI CCNNNNNNNGG 1 cut(s) 1374
BseMII CTCAG 3 cut(s) 957, 965, 1772
BseNI ACTGG 1 cut(s) 846
BseRI GAGGAG 1 cut(s) 526
BseXI GCAGC 8 cut(s) 113, 297, 865, 916, 1144, 1250, 1612, 1630
BseYI CCCAGC 1 cut(s) 1481
Bsh1236I CGCG 1 cut(s) 176
BshFI GGCC 1 cut(s) 792
BshNI GGYRCC 1 cut(s) 1364
BshTI ACCGGT 1 cut(s) 598
BsiHKAI GWGCWC 1 cut(s) 737
BsiSI CCGG 7 cut(s) 9, 265, 314, 543, 599, 1368, 1690
BslFI GGGAC 2 cut(s) 1107, 1693
BslI CCNNNNNNNGG 1 cut(s) 1374
BsmAI GTCTC 6 cut(s) 19, 165, 167, 201, 220, 1481
BsmBI CGTCTC 2 cut(s) 165, 220
BsmFI GGGAC 2 cut(s) 1107, 1693
BsmI GAATGC 1 cut(s) 906
BsnI GGCC 1 cut(s) 792
Bso31I GGTCTC 2 cut(s) 167, 201
Bsp119I TTCGAA 1 cut(s) 506
Bsp1286I GDGCHC 1 cut(s) 737
Bsp13I TCCGGA 1 cut(s) 1689
Bsp143I GATC 6 cut(s) 715, 1094, 1153, 1297, 1324, 1738
Bsp1720I GCTNAGC 1 cut(s) 951
BspACI CCGC 5 cut(s) 119, 159, 283, 488, 947
BspANI GGCC 1 cut(s) 792
BspCNI CTCAG 3 cut(s) 958, 964, 1771
BspEI TCCGGA 1 cut(s) 1689
BspFNI CGCG 1 cut(s) 176
BspLI GGNNCC 2 cut(s) 717, 1366
BspMAI CTGCAG 1 cut(s) 1134
BspMI ACCTGC 1 cut(s) 772
BspPI GGATC 6 cut(s) 710, 723, 1089, 1161, 1319, 1746
BspT104I TTCGAA 1 cut(s) 506
BspT107I GGYRCC 1 cut(s) 1364
BspTNI GGTCTC 2 cut(s) 167, 201
BsrFI RCCGGY 3 cut(s) 8, 598, 1367
BsrI ACTGG 1 cut(s) 846
BssAI RCCGGY 3 cut(s) 8, 598, 1367
BssECI CCNNGG 2 cut(s) 342, 1676
BssMI GATC 6 cut(s) 715, 1094, 1153, 1297, 1324, 1738
BssNI GRCGYC 1 cut(s) 144
BssSI CACGAG 1 cut(s) 483
BssT1I CCWWGG 1 cut(s) 342
Bst2BI CACGAG 1 cut(s) 483
Bst2UI CCWGG 3 cut(s) 794, 1434, 1677
Bst4CI ACNGT 5 cut(s) 672, 739, 1344, 1442, 1574
Bst6I CTCTTC 2 cut(s) 503, 688
BstACI GRCGYC 1 cut(s) 144
BstBI TTCGAA 1 cut(s) 506
BstDEI CTNAG 7 cut(s) 139, 951, 966, 1160, 1247, 1312, 1758
BstF5I GGATG 5 cut(s) 427, 577, 1495, 1513, 1543
BstFNI CGCG 1 cut(s) 176
BstHHI GCGC 2 cut(s) 47, 178
BstKTI GATC 6 cut(s) 718, 1097, 1156, 1300, 1327, 1741
BstMAI GTCTC 6 cut(s) 19, 165, 167, 201, 220, 1481
BstMBI GATC 6 cut(s) 715, 1094, 1153, 1297, 1324, 1738
BstMWI GCNNNNNNNGC 8 cut(s) 51, 338, 379, 758, 778, 971, 1216, 1627
BstNI CCWGG 3 cut(s) 794, 1434, 1677
BstNSI RCATGY 3 cut(s) 8, 351, 1146
BstSCI CCNGG 4 cut(s) 542, 792, 1432, 1675
BstSFI CTRYAG 2 cut(s) 352, 1130
BstUI CGCG 1 cut(s) 176
BstV1I GCAGC 8 cut(s) 113, 297, 865, 916, 1144, 1250, 1612, 1630
BstV2I GAAGAC 1 cut(s) 429
BstX2I RGATCY 5 cut(s) 715, 1094, 1153, 1324, 1738
BstYI RGATCY 5 cut(s) 715, 1094, 1153, 1324, 1738
BsuRI GGCC 1 cut(s) 792
BtrI CACGTC 2 cut(s) 214, 1082
BtsCI GGATG 5 cut(s) 427, 577, 1495, 1513, 1543
BtsIMutI CAGTG 3 cut(s) 668, 735, 839
BveI ACCTGC 1 cut(s) 772
CfoI GCGC 2 cut(s) 47, 178
Cfr10I RCCGGY 3 cut(s) 8, 598, 1367
Cfr13I GGNCC 1 cut(s) 316
CseI GACGC 2 cut(s) 152, 182
Csp6I GTAC 1 cut(s) 673
CspAI ACCGGT 1 cut(s) 598
CviQI GTAC 1 cut(s) 673
DdeI CTNAG 7 cut(s) 139, 951, 966, 1160, 1247, 1312, 1758
DpnI GATC 6 cut(s) 717, 1096, 1155, 1299, 1326, 1740
DpnII GATC 6 cut(s) 715, 1094, 1153, 1297, 1324, 1738
DraI TTTAAA 1 cut(s) 1191
Eam1104I CTCTTC 2 cut(s) 503, 688
EarI CTCTTC 2 cut(s) 503, 688
Eco130I CCWWGG 1 cut(s) 342
Eco31I GGTCTC 2 cut(s) 167, 201
Eco32I GATATC 1 cut(s) 633
Eco47I GGWCC 1 cut(s) 316
Eco57I CTGAAG 1 cut(s) 1685
EcoRI GAATTC 1 cut(s) 1116
EcoRII CCWGG 3 cut(s) 792, 1432, 1675
EcoRV GATATC 1 cut(s) 633
EcoT14I CCWWGG 1 cut(s) 342
EcoT22I ATGCAT 1 cut(s) 6
ErhI CCWWGG 1 cut(s) 342
Esp3I CGTCTC 2 cut(s) 165, 220
FaqI GGGAC 2 cut(s) 1107, 1693
FauI CCCGC 1 cut(s) 126
FbaI TGATCA 1 cut(s) 1297
FblI GTMKAC 1 cut(s) 1356
Fnu4HI GCNGC 9 cut(s) 102, 311, 879, 905, 948, 1133, 1239, 1601, 1619
FokI GGATG 5 cut(s) 434, 584, 1482, 1520, 1550
Fsp4HI GCNGC 9 cut(s) 102, 311, 879, 905, 948, 1133, 1239, 1601, 1619
FspBI CTAG 3 cut(s) 333, 552, 1789
FspI TGCGCA 1 cut(s) 46
GlaI GCGC 2 cut(s) 46, 177
GluI GCNGC 9 cut(s) 102, 311, 879, 905, 948, 1133, 1239, 1601, 1619
GsaI CCCAGC 1 cut(s) 1485
HaeIII GGCC 1 cut(s) 792
HapII CCGG 7 cut(s) 9, 265, 314, 543, 599, 1368, 1690
HgaI GACGC 2 cut(s) 152, 182
HhaI GCGC 2 cut(s) 47, 178
Hin1I GRCGYC 1 cut(s) 144
Hin6I GCGC 2 cut(s) 45, 176
HinP1I GCGC 2 cut(s) 45, 176
HindIII AAGCTT 2 cut(s) 1185, 1309
HinfI GANTC 5 cut(s) 268, 296, 302, 497, 1429
HpaII CCGG 7 cut(s) 9, 265, 314, 543, 599, 1368, 1690
HphI GGTGA 1 cut(s) 1193
Hpy166II GTNNAC 2 cut(s) 621, 1357
Hpy188I TCNGA 4 cut(s) 170, 301, 1094, 1665
Hpy188III TCNNGA 3 cut(s) 636, 1568, 1690
Hpy8I GTNNAC 2 cut(s) 621, 1357
Hpy99I CGWCG 2 cut(s) 170, 194
HpyAV CCTTC 5 cut(s) 555, 877, 1338, 1498, 1660
HpyCH4III ACNGT 5 cut(s) 672, 739, 1344, 1442, 1574
HpyCH4IV ACGT 3 cut(s) 213, 1081, 1383
HpyF10VI GCNNNNNNNGC 8 cut(s) 51, 338, 379, 758, 778, 971, 1216, 1627
HpyF3I CTNAG 7 cut(s) 139, 951, 966, 1160, 1247, 1312, 1758
HpySE526I ACGT 3 cut(s) 213, 1081, 1383
Hsp92I GRCGYC 1 cut(s) 144
HspAI GCGC 2 cut(s) 45, 176
Kpn2I TCCGGA 1 cut(s) 1689
Ksp22I TGATCA 1 cut(s) 1297
Kzo9I GATC 6 cut(s) 715, 1094, 1153, 1297, 1324, 1738
LmnI GCTCC 6 cut(s) 183, 362, 743, 769, 1001, 1597
Lsp1109I GCAGC 8 cut(s) 113, 297, 865, 916, 1144, 1250, 1612, 1630
LweI GCATC 5 cut(s) 562, 655, 1183, 1270, 1528
MaeI CTAG 3 cut(s) 333, 552, 1789
MaeII ACGT 3 cut(s) 213, 1081, 1383
MaeIII GTNAC 4 cut(s) 866, 1024, 1436, 1724
MalI GATC 6 cut(s) 717, 1096, 1155, 1299, 1326, 1740
MboI GATC 6 cut(s) 715, 1094, 1153, 1297, 1324, 1738
MboII GAAGA 9 cut(s) 54, 429, 520, 705, 1118, 1148, 1334, 1438, 1697
MflI RGATCY 5 cut(s) 715, 1094, 1153, 1324, 1738
MhlI GDGCHC 1 cut(s) 737
MluCI AATT 6 cut(s) 566, 754, 936, 1008, 1116, 1201
MlyI GAGTC 3 cut(s) 262, 296, 305
MmeI TCCRAC 6 cut(s) 148, 279, 721, 979, 1015, 1515
Mph1103I ATGCAT 1 cut(s) 6
MroI TCCGGA 1 cut(s) 1689
MseI TTAA 7 cut(s) 603, 935, 1011, 1190, 1200, 1307, 1527
MslI CAYNNNNRTG 2 cut(s) 9, 1179
MspA1I CMGCKG 1 cut(s) 1621
MspI CCGG 7 cut(s) 9, 265, 314, 543, 599, 1368, 1690
MspR9I CCNGG 4 cut(s) 544, 794, 1434, 1677
Mva1269I GAATGC 1 cut(s) 906
MvaI CCWGG 3 cut(s) 794, 1434, 1677
MvnI CGCG 1 cut(s) 176
MwoI GCNNNNNNNGC 8 cut(s) 51, 338, 379, 758, 778, 971, 1216, 1627
NciI CCSGG 1 cut(s) 544
NdeII GATC 6 cut(s) 715, 1094, 1153, 1297, 1324, 1738
NlaIV GGNNCC 2 cut(s) 717, 1366
NmuCI GTSAC 2 cut(s) 866, 1724
NsbI TGCGCA 1 cut(s) 46
NsiI ATGCAT 1 cut(s) 6
NspI RCATGY 3 cut(s) 8, 351, 1146
NspV TTCGAA 1 cut(s) 506
PaeI GCATGC 2 cut(s) 8, 351
PciI ACATGT 1 cut(s) 1142
PctI GAATGC 1 cut(s) 906
PfeI GAWTC 2 cut(s) 497, 1429
PflFI GACNNNGTC 1 cut(s) 212
PinAI ACCGGT 1 cut(s) 598
PkrI GCNGC 9 cut(s) 103, 312, 880, 906, 949, 1134, 1240, 1602, 1620
PleI GAGTC 3 cut(s) 262, 296, 304
PpsI GAGTC 3 cut(s) 262, 296, 304
PscI ACATGT 1 cut(s) 1142
PshBI ATTAAT 1 cut(s) 1200
Psp6I CCWGG 3 cut(s) 792, 1432, 1675
PspFI CCCAGC 1 cut(s) 1481
PspGI CCWGG 3 cut(s) 792, 1432, 1675
PspN4I GGNNCC 2 cut(s) 717, 1366
PspPI GGNCC 1 cut(s) 316
PstI CTGCAG 1 cut(s) 1134
PsuI RGATCY 5 cut(s) 715, 1094, 1153, 1324, 1738
PsyI GACNNNGTC 1 cut(s) 212
PvuII CAGCTG 1 cut(s) 1621
RsaI GTAC 1 cut(s) 674
RsaNI GTAC 1 cut(s) 673
RseI CAYNNNNRTG 2 cut(s) 9, 1179
SaqAI TTAA 7 cut(s) 603, 935, 1011, 1190, 1200, 1307, 1527
SatI GCNGC 9 cut(s) 102, 311, 879, 905, 948, 1133, 1239, 1601, 1619
Sau3AI GATC 6 cut(s) 715, 1094, 1153, 1297, 1324, 1738
Sau96I GGNCC 1 cut(s) 316
SchI GAGTC 3 cut(s) 262, 296, 305
ScrFI CCNGG 4 cut(s) 544, 794, 1434, 1677
SduI GDGCHC 1 cut(s) 737
SfaNI GCATC 5 cut(s) 562, 655, 1183, 1270, 1528
SfcI CTRYAG 2 cut(s) 352, 1130
SfuI TTCGAA 1 cut(s) 506
SinI GGWCC 1 cut(s) 316
SmiMI CAYNNNNRTG 2 cut(s) 9, 1179
SphI GCATGC 2 cut(s) 8, 351
Sse9I AATT 6 cut(s) 566, 754, 936, 1008, 1116, 1201
SsiI CCGC 5 cut(s) 119, 159, 283, 488, 947
SspMI CTAG 3 cut(s) 333, 552, 1789
StyD4I CCNGG 4 cut(s) 542, 792, 1432, 1675
StyI CCWWGG 1 cut(s) 342
TaaI ACNGT 5 cut(s) 672, 739, 1344, 1442, 1574
TaiI ACGT 3 cut(s) 216, 1084, 1386
TaqI TCGA 6 cut(s) 189, 500, 506, 731, 1449, 1518
TasI AATT 6 cut(s) 566, 754, 936, 1008, 1116, 1201
TatI WGTACW 1 cut(s) 672
TauI GCSGC 1 cut(s) 950
TfiI GAWTC 2 cut(s) 497, 1429
Tru1I TTAA 7 cut(s) 603, 935, 1011, 1190, 1200, 1307, 1527
Tru9I TTAA 7 cut(s) 603, 935, 1011, 1190, 1200, 1307, 1527
TscAI CASTG 3 cut(s) 675, 742, 846
TseFI GTSAC 2 cut(s) 866, 1724
TseI GCWGC 8 cut(s) 101, 310, 878, 904, 1132, 1238, 1600, 1618
Tsp45I GTSAC 2 cut(s) 866, 1724
TspDTI ATGAA 6 cut(s) 377, 776, 1035, 1239, 1517, 1754
TspRI CASTG 3 cut(s) 675, 742, 846
Tth111I GACNNNGTC 1 cut(s) 212
VpaK11BI GGWCC 1 cut(s) 316
VspI ATTAAT 1 cut(s) 1200
XapI RAATTY 1 cut(s) 1116
XceI RCATGY 3 cut(s) 8, 351, 1146
XmiI GTMKAC 1 cut(s) 1356
XspI CTAG 3 cut(s) 333, 552, 1789
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.