Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000717.1

Orthogroup ID

OG0009999

Physical Location & Seq

Genomic Coordinates Reverse (-)

12225 .. 17304

Gene Structure 5080 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000717.1_g000004.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2400 bp

atgatttgtttaaggctaaccactttggcccggcagcggctacgacgaagtaacaatggacacaattcatcaattaatctctacgattatccaagcctctctagagaaacccctctccttctcttacctgtgaccacaggagccgactgtcagtgccaccaaaccctctgtcaacgtgcttcggtcctagtctcctcgggagccgactgtagtatcgcgaccacaactgttactgaatcagccaagcaaggaagcttagcaaaagtcctcaccacgaggcacaaagaattcctcaatgaggttggtgctctcctcgtccacaatcgctcaaaagaagtcaggtcatgggacaaccccgacgaccgcacccaaacggaatgtgtaatagcgtttgagccaactcgcaaagtcgtttctgctttggtgttatatagcaagcggatgaatgccagtgtctctcactatctacaccaactaaagctctgcgcaagaagccagacatcttccacagccaaaaaactccacgcccaaatcatcaaagcagctctacatctctgcccgcccttacccaacaccctcttaggcgtctacggcaaatgcggtctcgtcggagacgcactccacctgttcgacgaaatgcctcacagagaccacgtctcatgggcttcacttctcaccgcacacaaccaagccagcctcccccaccggactctctccatgttccgcattatgtatgagtcggactctttgctgccggaccattttgtttttgctagtgttgtcaaggcttgctctagcttgggagctattaggcaaggcaagcaagttcatgcacgctttatgttatcgcagttttgcgaggatgatgttgtcaagtcttctctggttgatatgtatgcgaaatgtggattgcctgataatgctcgtgcggtttttgattcgatttcaaagaggagtgtggtttcttggactgctttgatttccgggtatgctaggagcggaaggaaattggatgctttggaaatgtttgagaagctaccggttaagagtttgttttcgtggactgctttgatatctggattggtgcaaagtggaaatggtgttgatgcactgtacttgtttattgaaatgagaagagaaagggttgatatagtggatccattggttctttcgagcactgttggagcttgtgctaatttggcagtcttggagcttggaaagcaggttcatggcctggttattggtcttgggtatgggtcgtgcttgtttattagtaatgcactggtggatatgtatgcaaaatgtagtgacattttagctgcgaaggatattttcggtggaatgcaacgaaaagatgtagtttcttggacttccataattgttggggcggctcagcatgggcgagctgaggaagcattgactttatatgatggcatggttggagctggaattaagcctaatgaagttacatttgttggactgatttatgcttgtagtcatgttggtttcgttagcaaaggacgtgccattttcagatctatgattgaagattatggaattcgtccctgtctgcagcactatacatgtttcttggatcttcttagtcgctctgggcatcttagtgaagctttgaatgttattaattcaatgccgttggagcctgatgaacccacttgggcagctttactaagtgcttgcaagcagcatggagatacccaaatgggtatcagggttgctgatcatcttttaagcttaaacccagaagatccttcaagttatatactgttatctaatgtctacgctggtgctggtatgtgggaaaatgtagcaaaagtgagaaagttgatgacagcgagagaagttaagaagaatccaggttacagttccatcgacattggaaaggaaagccaagtgttttatgctggagagacatctcatcctttgaaggatgagatattcgatttgcttaaagagttggatgcagagatgaggaaaagaggttatgttcccgacagtagctttgttttacatgacatggagcagcaagagaaagaaaagcagctgttttggcatagtgaaaggctggcattggcttatgggcttctgaaggctgttccagggacacctatccggatagtgaaaaatcttcgtgtttgcggagattgtcacacggacacagctgaaagacaatatgaaggcccagactgtgatactcatctatctgtagtaactgtgagactgaatctggtgatagcagcagatcatgacagtcctgcccaaactaatgcatctgtatggagaaggcaagaagctgaagagcatacctcaccggtcaccagtttcatgtgtaagctgaatagataccttgctctctcctgtatgcttgtgtctgaggcttaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR

Protein Analysis

799

Amino Acids

88.24

Weight (kDa)

7.55

Isoelectric Point (pI)

38.79

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009999)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G14050
fragaria_vesca	FvH4_4g13160 FvH4_4g13160 FvH4_4g13160
malus_domestica	MD04G1018600.v1.1
prunus_persica	Prupe.1G167400_v2.0.a1
pyrus_communis	pycom04g01490
rosa_chinensis	RchiOBHm_Chr4g0413241
rosa_laevigata	RLG00000008229
rosa_multiflora	Rmu_sc0000717.1_g000004 Rmu_sc0005849.1_g000002 Rmu_sc0040119.1_g000001
rosa_roxburghii	Rroxscaffold_5G00357220
rosa_rugosa	Rorug04G0118700 Rorug04G0118800 Rorug04G0118900 Rorug04G0118900
rosa_samantha	Rh4AG178700 Rh4BG178000 Rh4CG189600
rosa_wichuraiana	Rw4G014870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	487
Acc36I	ACCTGC	1 cut(s)	1213
AccBSI	CCGCTC	1 cut(s)	999
AccI	GTMKAC	2 cut(s)	588, 1797
AccII	CGCG	1 cut(s)	218
AccIII	TCCGGA	1 cut(s)	2130
AclWI	GGATC	4 cut(s)	1151, 1164, 1602, 1760
AcsI	RAATTY	2 cut(s)	287, 1557
AcuI	CTGAAG	2 cut(s)	2126, 2334
AcyI	GRCGYC	1 cut(s)	585
AfaI	GTAC	1 cut(s)	1115
AfiI	CCNNNNNNNGG	2 cut(s)	36, 298
AflIII	ACRYGT	1 cut(s)	1583
AgeI	ACCGGT	2 cut(s)	1039, 2329
AgsI	TTSAA	7 cut(s)	948, 1127, 1547, 1633, 1647, 1773, 1945
AjiI	CACGTC	2 cut(s)	655, 1523
AjnI	CCWGG	3 cut(s)	1233, 1873, 2116
AloI	GAACNNNNNNTCC	2 cut(s)	1209, 1241
Alw21I	GWGCWC	2 cut(s)	310, 1178
Alw26I	GTCTC	8 cut(s)	196, 460, 606, 608, 642, 661, 1922, 2230
AlwI	GGATC	4 cut(s)	1151, 1164, 1602, 1760
Ama87I	CYCGRG	1 cut(s)	196
Aor13HI	TCCGGA	1 cut(s)	2130
AoxI	GGCC	3 cut(s)	27, 1231, 2197
ApoI	RAATTY	2 cut(s)	287, 1557
ArsI	GACNNNNNNTTYG	4 cut(s)	154, 186, 2003, 2035
AseI	ATTAAT	2 cut(s)	75, 1641
AsiGI	ACCGGT	2 cut(s)	1039, 2329
AspLEI	GCGC	1 cut(s)	488
AspS9I	GGNCC	4 cut(s)	28, 184, 757, 2198
AsuC2I	CCSGG	2 cut(s)	31, 985
AsuHPI	GGTGA	5 cut(s)	262, 667, 2260, 2319, 2326
AvaI	CYCGRG	1 cut(s)	196
AvaII	GGWCC	2 cut(s)	184, 757
BaeI	ACNNNNGTAYC	2 cut(s)	196, 229
BamHI	GGATCC	1 cut(s)	1156
BauI	CACGAG	2 cut(s)	274, 924
BbsI	GAAGAC	1 cut(s)	870
Bbv12I	GWGCWC	2 cut(s)	310, 1178
BbvCI	CCTCAGC	1 cut(s)	1407
BccI	CCATC	2 cut(s)	1424, 1895
BceAI	ACGGC	2 cut(s)	607, 1636
BciT130I	CCWGG	3 cut(s)	1235, 1875, 2118
BclI	TGATCA	1 cut(s)	1738
BcnI	CCSGG	2 cut(s)	31, 985
BcoDI	GTCTC	8 cut(s)	196, 460, 606, 608, 642, 661, 1922, 2230
BfaI	CTAG	5 cut(s)	102, 188, 774, 795, 993
BfmI	CTRYAG	3 cut(s)	208, 1571, 2223
BfuAI	ACCTGC	1 cut(s)	1213
BglII	AGATCT	1 cut(s)	1535
BlpI	GCTNAGC	2 cut(s)	256, 1392
Bme1390I	CCNGG	5 cut(s)	31, 985, 1235, 1875, 2118
Bme18I	GGWCC	2 cut(s)	184, 757
BmeT110I	CYCGRG	1 cut(s)	196
BmgBI	CACGTC	2 cut(s)	655, 1523
BmgT120I	GGNCC	4 cut(s)	28, 184, 757, 2198
BmiI	GGNNCC	4 cut(s)	142, 202, 1158, 1659
BmrFI	CCNGG	5 cut(s)	31, 985, 1235, 1875, 2118
BmsI	GCATC	5 cut(s)	1003, 1096, 1624, 1969, 2297
BpiI	GAAGAC	1 cut(s)	870
BplI	GAGNNNNNCTC	6 cut(s)	603, 635, 728, 760, 2309, 2341
BpmI	CTGGAG	1 cut(s)	1944
Bpu10I	CCTNAGC	1 cut(s)	1407
Bpu1102I	GCTNAGC	2 cut(s)	256, 1392
BpuMI	CCSGG	2 cut(s)	31, 985
BsaBI	GATNNNNATC	1 cut(s)	2214
BsaHI	GRCGYC	1 cut(s)	585
BsaI	GGTCTC	2 cut(s)	608, 642
BsaJI	CCNNGG	2 cut(s)	195, 2117
BsaWI	WCCGGW	4 cut(s)	705, 1039, 2130, 2329
Bsc4I	CCNNNNNNNGG	2 cut(s)	36, 298
Bse118I	RCCGGY	2 cut(s)	1039, 2329
Bse1I	ACTGG	3 cut(s)	450, 1287, 2337
Bse8I	GATNNNNATC	1 cut(s)	2214
BseAI	TCCGGA	1 cut(s)	2130
BseBI	CCWGG	3 cut(s)	1235, 1875, 2118
BseDI	CCNNGG	2 cut(s)	195, 2117
BseGI	GGATG	6 cut(s)	447, 868, 1018, 1936, 1954, 1984
BseJI	GATNNNNATC	1 cut(s)	2214
BseLI	CCNNNNNNNGG	2 cut(s)	36, 298
BseMII	CTCAG	3 cut(s)	1398, 1406, 2382
BseNI	ACTGG	3 cut(s)	450, 1287, 2337
BseRI	GAGGAG	3 cut(s)	184, 302, 967
Bsh1236I	CGCG	1 cut(s)	218
Bsh1285I	CGRYCG	1 cut(s)	364
BshFI	GGCC	3 cut(s)	29, 1233, 2199
BshTI	ACCGGT	2 cut(s)	1039, 2329
BsiEI	CGRYCG	1 cut(s)	364
BsiHKAI	GWGCWC	2 cut(s)	310, 1178
BsiHKCI	CYCGRG	1 cut(s)	196
BsiSI	CCGG	7 cut(s)	31, 706, 755, 984, 1040, 2131, 2330
BslFI	GGGAC	3 cut(s)	362, 1548, 2134
BslI	CCNNNNNNNGG	2 cut(s)	36, 298
BsmAI	GTCTC	8 cut(s)	196, 460, 606, 608, 642, 661, 1922, 2230
BsmBI	CGTCTC	2 cut(s)	606, 661
BsmFI	GGGAC	3 cut(s)	362, 1548, 2134
BsmI	GAATGC	2 cut(s)	451, 1347
BsnI	GGCC	3 cut(s)	29, 1233, 2199
Bso31I	GGTCTC	2 cut(s)	608, 642
BsoBI	CYCGRG	1 cut(s)	196
Bsp1286I	GDGCHC	2 cut(s)	310, 1178
Bsp13I	TCCGGA	1 cut(s)	2130
Bsp143I	GATC	6 cut(s)	1156, 1535, 1594, 1738, 1765, 2260
Bsp1720I	GCTNAGC	2 cut(s)	256, 1392
Bsp68I	TCGCGA	1 cut(s)	218
BspANI	GGCC	3 cut(s)	29, 1233, 2199
BspCNI	CTCAG	3 cut(s)	1399, 1405, 2383
BspEI	TCCGGA	1 cut(s)	2130
BspFNI	CGCG	1 cut(s)	218
BspHI	TCATGA	1 cut(s)	2263
BspLI	GGNNCC	4 cut(s)	142, 202, 1158, 1659
BspMAI	CTGCAG	1 cut(s)	1575
BspMI	ACCTGC	1 cut(s)	1213
BspPI	GGATC	4 cut(s)	1151, 1164, 1602, 1760
BspQI	GCTCTTC	1 cut(s)	2310
BspTNI	GGTCTC	2 cut(s)	608, 642
BsrBI	CCGCTC	1 cut(s)	999
BsrFI	RCCGGY	2 cut(s)	1039, 2329
BsrI	ACTGG	3 cut(s)	450, 1287, 2337
BssAI	RCCGGY	2 cut(s)	1039, 2329
BssECI	CCNNGG	2 cut(s)	195, 2117
BssMI	GATC	6 cut(s)	1156, 1535, 1594, 1738, 1765, 2260
BssNI	GRCGYC	1 cut(s)	585
BssSI	CACGAG	2 cut(s)	274, 924
Bst2BI	CACGAG	2 cut(s)	274, 924
Bst2UI	CCWGG	3 cut(s)	1235, 1875, 2118
Bst6I	CTCTTC	2 cut(s)	1129, 2310
BstACI	GRCGYC	1 cut(s)	585
BstDEI	CTNAG	8 cut(s)	256, 580, 1392, 1407, 1601, 1619, 1688, 2391
BstEII	GGTNACC	1 cut(s)	2332
BstENI	CCTNNNNNAGG	1 cut(s)	296
BstF5I	GGATG	6 cut(s)	447, 868, 1018, 1936, 1954, 1984
BstFNI	CGCG	1 cut(s)	218
BstHHI	GCGC	1 cut(s)	488
BstKTI	GATC	6 cut(s)	1159, 1538, 1597, 1741, 1768, 2263
BstMAI	GTCTC	8 cut(s)	196, 460, 606, 608, 642, 661, 1922, 2230
BstMBI	GATC	6 cut(s)	1156, 1535, 1594, 1738, 1765, 2260
BstMCI	CGRYCG	1 cut(s)	364
BstMWI	GCNNNNNNNGC	8 cut(s)	492, 591, 820, 1199, 1219, 1412, 1657, 2068
BstNI	CCWGG	3 cut(s)	1235, 1875, 2118
BstNSI	RCATGY	1 cut(s)	1587
BstPI	GGTNACC	1 cut(s)	2332
BstSCI	CCNGG	5 cut(s)	29, 983, 1233, 1873, 2116
BstSFI	CTRYAG	3 cut(s)	208, 1571, 2223
BstUI	CGCG	1 cut(s)	218
BstV2I	GAAGAC	1 cut(s)	870
BstX2I	RGATCY	4 cut(s)	1156, 1535, 1594, 1765
BstYI	RGATCY	4 cut(s)	1156, 1535, 1594, 1765
BsuRI	GGCC	3 cut(s)	29, 1233, 2199
BtrI	CACGTC	2 cut(s)	655, 1523
BtsCI	GGATG	6 cut(s)	447, 868, 1018, 1936, 1954, 1984
BtsIMutI	CAGTG	5 cut(s)	158, 457, 1109, 1176, 1280
BtuMI	TCGCGA	1 cut(s)	218
BveI	ACCTGC	1 cut(s)	1213
CciI	TCATGA	1 cut(s)	2263
CfoI	GCGC	1 cut(s)	488
Cfr10I	RCCGGY	2 cut(s)	1039, 2329
Cfr13I	GGNCC	4 cut(s)	28, 184, 757, 2198
CseI	GACGC	2 cut(s)	574, 623
Csp6I	GTAC	1 cut(s)	1114
CspAI	ACCGGT	2 cut(s)	1039, 2329
CviQI	GTAC	1 cut(s)	1114
DdeI	CTNAG	8 cut(s)	256, 580, 1392, 1407, 1601, 1619, 1688, 2391
DpnI	GATC	6 cut(s)	1158, 1537, 1596, 1740, 1767, 2262
DpnII	GATC	6 cut(s)	1156, 1535, 1594, 1738, 1765, 2260
Eam1104I	CTCTTC	2 cut(s)	1129, 2310
EarI	CTCTTC	2 cut(s)	1129, 2310
Eco31I	GGTCTC	2 cut(s)	608, 642
Eco32I	GATATC	1 cut(s)	1074
Eco47I	GGWCC	2 cut(s)	184, 757
Eco57I	CTGAAG	2 cut(s)	2126, 2334
Eco88I	CYCGRG	1 cut(s)	196
Eco91I	GGTNACC	1 cut(s)	2332
EcoNI	CCTNNNNNAGG	1 cut(s)	296
EcoO65I	GGTNACC	1 cut(s)	2332
EcoRI	GAATTC	2 cut(s)	287, 1557
EcoRII	CCWGG	3 cut(s)	1233, 1873, 2116
EcoRV	GATATC	1 cut(s)	1074
EcoT22I	ATGCAT	1 cut(s)	2290
Esp3I	CGTCTC	2 cut(s)	606, 661
FaqI	GGGAC	3 cut(s)	362, 1548, 2134
FauI	CCCGC	1 cut(s)	567
FbaI	TGATCA	1 cut(s)	1738
FblI	GTMKAC	2 cut(s)	588, 1797
FokI	GGATG	6 cut(s)	454, 875, 1025, 1923, 1961, 1991
FspBI	CTAG	5 cut(s)	102, 188, 774, 795, 993
FspI	TGCGCA	1 cut(s)	487
GlaI	GCGC	1 cut(s)	487
GsuI	CTGGAG	1 cut(s)	1944
HaeIII	GGCC	3 cut(s)	29, 1233, 2199
HapII	CCGG	7 cut(s)	31, 706, 755, 984, 1040, 2131, 2330
HgaI	GACGC	2 cut(s)	574, 623
HhaI	GCGC	1 cut(s)	488
Hin1I	GRCGYC	1 cut(s)	585
Hin6I	GCGC	1 cut(s)	486
HinP1I	GCGC	1 cut(s)	486
HincII	GTYRAC	1 cut(s)	173
HindII	GTYRAC	1 cut(s)	173
HindIII	AAGCTT	3 cut(s)	253, 1626, 1750
HinfI	GANTC	7 cut(s)	236, 709, 737, 743, 938, 1870, 2242
HpaII	CCGG	7 cut(s)	31, 706, 755, 984, 1040, 2131, 2330
HphI	GGTGA	5 cut(s)	262, 667, 2260, 2319, 2326
Hpy166II	GTNNAC	5 cut(s)	173, 319, 589, 1062, 1798
Hpy188I	TCNGA	5 cut(s)	611, 742, 1535, 2106, 2392
Hpy188III	TCNNGA	7 cut(s)	102, 198, 217, 1077, 2009, 2131, 2264
Hpy8I	GTNNAC	5 cut(s)	173, 319, 589, 1062, 1798
Hpy99I	CGWCG	4 cut(s)	48, 362, 611, 635
HpyAV	CCTTC	8 cut(s)	128, 996, 1318, 1779, 1939, 2101, 2189, 2295
HpyCH4IV	ACGT	3 cut(s)	175, 654, 1522
HpyF10VI	GCNNNNNNNGC	8 cut(s)	492, 591, 820, 1199, 1219, 1412, 1657, 2068
HpyF3I	CTNAG	8 cut(s)	256, 580, 1392, 1407, 1601, 1619, 1688, 2391
HpySE526I	ACGT	3 cut(s)	175, 654, 1522
Hsp92I	GRCGYC	1 cut(s)	585
HspAI	GCGC	1 cut(s)	486
Kpn2I	TCCGGA	1 cut(s)	2130
Ksp22I	TGATCA	1 cut(s)	1738
Kzo9I	GATC	6 cut(s)	1156, 1535, 1594, 1738, 1765, 2260
LguI	GCTCTTC	1 cut(s)	2310
LmnI	GCTCC	9 cut(s)	140, 200, 803, 996, 1184, 1210, 1442, 1657, 2038
LweI	GCATC	5 cut(s)	1003, 1096, 1624, 1969, 2297
MaeI	CTAG	5 cut(s)	102, 188, 774, 795, 993
MaeII	ACGT	3 cut(s)	175, 654, 1522
MaeIII	GTNAC	9 cut(s)	50, 130, 229, 1307, 1465, 1877, 2165, 2227, 2332
MalI	GATC	6 cut(s)	1158, 1537, 1596, 1740, 1767, 2262
MbiI	CCGCTC	1 cut(s)	999
MboI	GATC	6 cut(s)	1156, 1535, 1594, 1738, 1765, 2260
MboII	GAAGA	9 cut(s)	495, 870, 1146, 1559, 1589, 1775, 1879, 2138, 2327
MflI	RGATCY	4 cut(s)	1156, 1535, 1594, 1765
MhlI	GDGCHC	2 cut(s)	310, 1178
MluCI	AATT	9 cut(s)	64, 72, 287, 1007, 1195, 1377, 1449, 1557, 1642
MlyI	GAGTC	3 cut(s)	703, 737, 746
MmeI	TCCRAC	7 cut(s)	589, 720, 1162, 1420, 1456, 1635, 1956
Mph1103I	ATGCAT	1 cut(s)	2290
MroI	TCCGGA	1 cut(s)	2130
MslI	CAYNNNNRTG	2 cut(s)	1620, 2293
MspA1I	CMGCKG	3 cut(s)	37, 2062, 2180
MspI	CCGG	7 cut(s)	31, 706, 755, 984, 1040, 2131, 2330
MspR9I	CCNGG	5 cut(s)	31, 985, 1235, 1875, 2118
Mva1269I	GAATGC	2 cut(s)	451, 1347
MvaI	CCWGG	3 cut(s)	1235, 1875, 2118
MvnI	CGCG	1 cut(s)	218
MwoI	GCNNNNNNNGC	8 cut(s)	492, 591, 820, 1199, 1219, 1412, 1657, 2068
NciI	CCSGG	2 cut(s)	31, 985
NdeII	GATC	6 cut(s)	1156, 1535, 1594, 1738, 1765, 2260
NlaIV	GGNNCC	4 cut(s)	142, 202, 1158, 1659
NmuCI	GTSAC	4 cut(s)	130, 1307, 2165, 2332
NruI	TCGCGA	1 cut(s)	218
NsbI	TGCGCA	1 cut(s)	487
NsiI	ATGCAT	1 cut(s)	2290
NspI	RCATGY	1 cut(s)	1587
PagI	TCATGA	1 cut(s)	2263
PciI	ACATGT	1 cut(s)	1583
PciSI	GCTCTTC	1 cut(s)	2310
PctI	GAATGC	2 cut(s)	451, 1347
PfeI	GAWTC	4 cut(s)	236, 938, 1870, 2242
PflFI	GACNNNGTC	1 cut(s)	653
PinAI	ACCGGT	2 cut(s)	1039, 2329
PleI	GAGTC	3 cut(s)	703, 737, 745
PpsI	GAGTC	3 cut(s)	703, 737, 745
PscI	ACATGT	1 cut(s)	1583
PshBI	ATTAAT	2 cut(s)	75, 1641
Psp6I	CCWGG	3 cut(s)	1233, 1873, 2116
PspEI	GGTNACC	1 cut(s)	2332
PspGI	CCWGG	3 cut(s)	1233, 1873, 2116
PspN4I	GGNNCC	4 cut(s)	142, 202, 1158, 1659
PspPI	GGNCC	4 cut(s)	28, 184, 757, 2198
PstI	CTGCAG	1 cut(s)	1575
PsuI	RGATCY	4 cut(s)	1156, 1535, 1594, 1765
PsyI	GACNNNGTC	1 cut(s)	653
PvuII	CAGCTG	2 cut(s)	2062, 2180
RruI	TCGCGA	1 cut(s)	218
RsaI	GTAC	1 cut(s)	1115
RsaNI	GTAC	1 cut(s)	1114
RseI	CAYNNNNRTG	2 cut(s)	1620, 2293
SapI	GCTCTTC	1 cut(s)	2310
Sau3AI	GATC	6 cut(s)	1156, 1535, 1594, 1738, 1765, 2260
Sau96I	GGNCC	4 cut(s)	28, 184, 757, 2198
SchI	GAGTC	3 cut(s)	703, 737, 746
ScrFI	CCNGG	5 cut(s)	31, 985, 1235, 1875, 2118
SduI	GDGCHC	2 cut(s)	310, 1178
SfaNI	GCATC	5 cut(s)	1003, 1096, 1624, 1969, 2297
SfcI	CTRYAG	3 cut(s)	208, 1571, 2223
SinI	GGWCC	2 cut(s)	184, 757
SmiMI	CAYNNNNRTG	2 cut(s)	1620, 2293
Sse9I	AATT	9 cut(s)	64, 72, 287, 1007, 1195, 1377, 1449, 1557, 1642
SspMI	CTAG	5 cut(s)	102, 188, 774, 795, 993
StyD4I	CCNGG	5 cut(s)	29, 983, 1233, 1873, 2116
TaiI	ACGT	3 cut(s)	178, 657, 1525
TaqI	TCGA	5 cut(s)	630, 941, 1172, 1890, 1959
TaqII	GACCGA	1 cut(s)	172
TasI	AATT	9 cut(s)	64, 72, 287, 1007, 1195, 1377, 1449, 1557, 1642
TatI	WGTACW	1 cut(s)	1113
TauI	GCSGC	2 cut(s)	40, 1391
TfiI	GAWTC	4 cut(s)	236, 938, 1870, 2242
TscAI	CASTG	5 cut(s)	158, 457, 1116, 1183, 1287
TseFI	GTSAC	4 cut(s)	130, 1307, 2165, 2332
Tsp45I	GTSAC	4 cut(s)	130, 1307, 2165, 2332
TspDTI	ATGAA	8 cut(s)	57, 458, 818, 1217, 1476, 1680, 2208, 2332
TspGWI	ACGGA	2 cut(s)	389, 2186
TspRI	CASTG	5 cut(s)	158, 457, 1116, 1183, 1287
Tth111I	GACNNNGTC	1 cut(s)	653
VpaK11BI	GGWCC	2 cut(s)	184, 757
VspI	ATTAAT	2 cut(s)	75, 1641
XagI	CCTNNNNNAGG	1 cut(s)	296
XapI	RAATTY	2 cut(s)	287, 1557
XbaI	TCTAGA	1 cut(s)	101
XceI	RCATGY	1 cut(s)	1587
XmiI	GTMKAC	2 cut(s)	588, 1797
XspI	CTAG	5 cut(s)	102, 188, 774, 795, 993
Zsp2I	ATGCAT	1 cut(s)	2290

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.