pycom04g01490

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
OG0009999
Physical Location & Seq
Reverse (-)
1381078 .. 1382910
1833 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom04g01490.1

Sequence Viewer

Length: 1833 bp
ATGCCAGCGTCTCACTTCCTACACCAACTGCAACTCTGCGCCCGACGCCGCGTGCCTTTTACCGCCAAAAACCTCCACGCCCAAATCATCAAAACGGGCCTCCATCTATGCGTGCCCTTACCCAACACCCTTTTGGATGCCTACGGGAAATGCGGTCTAGTCGAAGACGCGCGCCGGGTGTTCGACGAAATGCCTCAACGAGACCTTGTCTCGTGGGCTTCAATTTTCACCGCCCACAACCTAGCCAGCGTCCCCCACCGAACCCTCTCCATGTTCCCTGCAATGTTCGAATCGGATGGTTTGCAGCCGGACCATTTTGTGTTTGCTTGCATTGTCAAGGCCTGCTCTGGTTTGGAAGCTGTTAGACAAGGCAAGCAAGTGCATGGCCGATTTTTGGTGTCCTCATTTCGTGATGACGATGTGGTTAAGTCGTCCCTGGTTGATATGTATGCGAAATGTGGATTGCCCGATAATGCTCGTGCAGTTTTTGATTCAATTGTGTCCAGAAGTCCGGTTTCTTGGACTGCTCTGATTTCAGGGTATGCCAGGAGTGGAAGGAAATCAGATGCTATTGAAATGTTTGAGAGGGTACCTCTTAAGAATTTGTTTTGTTGGACTGCTTTGATATCTGGGTTGGTACAGAGCGGACACGGTGTTGATGCGTTTTATTTGTTTATTGAAATGAGGAGAGACGGGGTTGATGTAGTGGACCCATTAGTTCTCTCCAGCATTGTTGGAGCTTCTGCTAATTTGGCAGTGTTGGAGCTTGGAAAGCAGGTTCATGGTCTAGTTCTTGGTCTTGGCTATGAGTCTTGCTTGTTTATTAGTAATGCACTAGTTGATATGTATGCAAAATGTAGTGACATTTTAGCTGCTAAGGATATTTTTGCTCGAATGCATCGAAGAGATGTAGTTTCTTGGACTTCTATAATTGTTGGGGCAGCTCAGCACGGGCAAGCTGAGGAAGCTTTGACTTTATATGATCAGATGATTGCAGCCGGAATAAGGCCAAATCAAGTGACCTTTGTTGGATTGATTTATGCTTGTAGCCATGTTGGTTTAGTTAGCAAGGGACGTGCTCTTTTCAGATCTATGATTGAGGATTACGGGATTAGCCCCTCCCTGCAGCACTATACATGCTTTTTGGATCTTCTTAGTCGCTCGGGGCACCTTGATGAAGCTTCAAATGTTATTGATTCAATGCCGTTTGAGCCGGATGAACCCACTTGGGCAGCTTTGTTAAGTGCTTGCAGACATCATGGAGAAACCCAAATGGGAATCAGGGTTGCCGATCATCTTTTAAGCTTAAAACCAGAAGACCCTTCAAGTTACATACTGTTGTCTAATGTCTATGCCGGTGCGTGTATATGGGAAAACGTAGCAGAAGTGAGAAAGTTGATGGTTGCCAGAGAAGTTAAGAAGAAGCCTGGTTATAGTTCCATTGGCATTGGAAAGGAAAGCCAAGTCTTTTATGCCGGAGAGACATCTCATCCTATGAAGGATGAGATTTTCGGTTTGCTCAAGGAGTTAGATGCAGAGATGAGGAGAAGAGGCTATGTGCCTGACAGTAGCTTTGTTTTACATGAAATGGAGGACCAAGAGAAGGAAAGGCAGCTCTTTTGGCACAGCGAGAGGTTGGCTGTGGCGTACGGGCTGCTTAAGGCTGTTCCAGGGACTGCTATTCGGATAGTGAAAAATCTTCGTGTCTGCGGAGATTGTCATACTGTATTGAAATTCATAAGCAGCATTGTGAAGAGGGACATCATTGTTCGAGATGCCAGCAGATACCATCATTTTACTGACGGGAAATGTTCGTGCAATGACTTCTGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DYW_deaminase PPR

Protein Analysis

611

Amino Acids

67.84

Weight (kDa)

6.78

Isoelectric Point (pI)

45.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR PF01535 42 - 68 5.6e-06 PPR repeat
PPR PF01535 204 - 233 7.3e-06 PPR repeat
PPR_2 PF13041 302 - 350 1.2e-10 PPR repeat family
PPR_long PF17177 318 - 424 6.1e-09 Pentacotripeptide-repeat region of PRORP
E_motif PF20431 422 - 481 9.3e-15 E motif
DYW_deaminase PF14432 518 - 610 4.7e-43 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 766
Acc65I GGTACC 1 cut(s) 589
AccB1I GGYRCC 2 cut(s) 589, 1167
AccBSI CCGCTC 1 cut(s) 645
AccII CGCG 3 cut(s) 51, 170, 172
AciI CCGC 6 cut(s) 49, 63, 153, 231, 645, 1710
AclWI GGATC 1 cut(s) 1155
AcoI YGGCCR 1 cut(s) 385
AcsI RAATTY 2 cut(s) 601, 1733
AcyI GRCGYC 1 cut(s) 46
AfaI GTAC 3 cut(s) 591, 639, 1649
AfiI CCNNNNNNNGG 3 cut(s) 394, 1005, 1603
AflII CTTAAG 2 cut(s) 596, 1658
AgsI TTSAA 8 cut(s) 222, 495, 575, 680, 1185, 1200, 1326, 1732
AhlI ACTAGT 1 cut(s) 835
AjiI CACGTC 1 cut(s) 1076
AjnI CCWGG 4 cut(s) 435, 545, 1426, 1669
AloI GAACNNNNNNTCC 2 cut(s) 762, 794
Alw21I GWGCWC 1 cut(s) 1081
Alw26I GTCTC 5 cut(s) 15, 195, 214, 684, 1475
AlwI GGATC 1 cut(s) 1155
AlwNI CAGNNNCTG 1 cut(s) 1676
Ama87I CYCGRG 1 cut(s) 1162
AoxI GGCC 4 cut(s) 97, 339, 385, 1007
ApeKI GCWGC 9 cut(s) 304, 872, 941, 995, 1126, 1232, 1612, 1654, 1743
ApoI RAATTY 2 cut(s) 601, 1733
ArsI GACNNNNNNTTYG 2 cut(s) 1556, 1588
Asp718I GGTACC 1 cut(s) 589
AspLEI GCGC 3 cut(s) 41, 172, 174
AspS9I GGNCC 4 cut(s) 97, 310, 709, 1594
AsuC2I CCSGG 1 cut(s) 176
AsuHPI GGTGA 1 cut(s) 220
AsuII TTCGAA 1 cut(s) 288
AvaI CYCGRG 1 cut(s) 1162
AvaII GGWCC 3 cut(s) 310, 709, 1594
BaeGI GKGCMC 2 cut(s) 117, 1170
BanI GGYRCC 2 cut(s) 589, 1167
BauI CACGAG 2 cut(s) 211, 477
BbsI GAAGAC 2 cut(s) 171, 1323
Bbv12I GWGCWC 1 cut(s) 1081
BbvCI CCTCAGC 1 cut(s) 960
BbvI GCAGC 9 cut(s) 316, 859, 953, 1007, 1138, 1244, 1624, 1641, 1755
BccI CCATC 4 cut(s) 111, 290, 1393, 1797
BceAI ACGGC 1 cut(s) 1189
BciT130I CCWGG 4 cut(s) 437, 547, 1428, 1671
BclI TGATCA 1 cut(s) 982
BcnI CCSGG 1 cut(s) 176
BcoDI GTCTC 5 cut(s) 15, 195, 214, 684, 1475
BcuI ACTAGT 1 cut(s) 835
BfaI CTAG 4 cut(s) 158, 242, 788, 836
BfmI CTRYAG 1 cut(s) 1124
BfrI CTTAAG 2 cut(s) 596, 1658
BfuAI ACCTGC 1 cut(s) 766
BglII AGATCT 1 cut(s) 1088
BlpI GCTNAGC 1 cut(s) 945
Bme1390I CCNGG 5 cut(s) 176, 437, 547, 1428, 1671
Bme18I GGWCC 3 cut(s) 310, 709, 1594
BmeT110I CYCGRG 1 cut(s) 1162
BmgBI CACGTC 1 cut(s) 1076
BmgT120I GGNCC 4 cut(s) 97, 310, 709, 1594
BmiI GGNNCC 3 cut(s) 591, 711, 1169
BmrFI CCNGG 5 cut(s) 176, 437, 547, 1428, 1671
BmsI GCATC 6 cut(s) 127, 556, 649, 907, 1522, 1765
BpiI GAAGAC 2 cut(s) 171, 1323
BplI GAGNNNNNCTC 2 cut(s) 577, 609
BpmI CTGGAG 1 cut(s) 709
Bpu10I CCTNAGC 2 cut(s) 876, 960
Bpu1102I GCTNAGC 1 cut(s) 945
Bpu14I TTCGAA 1 cut(s) 288
BpuEI CTTGAG 1 cut(s) 1505
BpuMI CCSGG 1 cut(s) 176
BsaHI GRCGYC 1 cut(s) 46
BsaI GGTCTC 1 cut(s) 195
BsaJI CCNNGG 2 cut(s) 435, 1670
BsaWI WCCGGW 1 cut(s) 511
Bsc4I CCNNNNNNNGG 3 cut(s) 394, 1005, 1603
Bse118I RCCGGY 1 cut(s) 1355
Bse3DI GCAATG 2 cut(s) 288, 1825
BseBI CCWGG 4 cut(s) 437, 547, 1428, 1671
BseDI CCNNGG 2 cut(s) 435, 1670
BseGI GGATG 5 cut(s) 142, 301, 1222, 1489, 1507
BseLI CCNNNNNNNGG 3 cut(s) 394, 1005, 1603
BseMI GCAATG 2 cut(s) 288, 1825
BseMII CTCAG 2 cut(s) 951, 959
BsePI GCGCGC 1 cut(s) 170
BseRI GAGGAG 2 cut(s) 700, 1558
BseSI GKGCMC 2 cut(s) 117, 1170
BseXI GCAGC 9 cut(s) 316, 859, 953, 1007, 1138, 1244, 1624, 1641, 1755
BsgI GTGCAG 1 cut(s) 501
Bsh1236I CGCG 3 cut(s) 51, 170, 172
BshFI GGCC 4 cut(s) 99, 341, 387, 1009
BshNI GGYRCC 2 cut(s) 589, 1167
BsiHKAI GWGCWC 1 cut(s) 1081
BsiHKCI CYCGRG 1 cut(s) 1162
BsiSI CCGG 7 cut(s) 175, 308, 512, 999, 1214, 1356, 1476
BsiWI CGTACG 1 cut(s) 1647
BslFI GGGAC 5 cut(s) 236, 418, 1086, 1687, 1772
BslI CCNNNNNNNGG 3 cut(s) 394, 1005, 1603
BsmAI GTCTC 5 cut(s) 15, 195, 214, 684, 1475
BsmBI CGTCTC 2 cut(s) 15, 684
BsmFI GGGAC 5 cut(s) 236, 418, 1086, 1687, 1772
BsmI GAATGC 1 cut(s) 900
BsnI GGCC 4 cut(s) 99, 341, 387, 1009
Bso31I GGTCTC 1 cut(s) 195
BsoBI CYCGRG 1 cut(s) 1162
Bsp119I TTCGAA 1 cut(s) 288
Bsp1286I GDGCHC 3 cut(s) 117, 1081, 1170
Bsp143I GATC 4 cut(s) 982, 1088, 1147, 1291
Bsp1720I GCTNAGC 1 cut(s) 945
BspACI CCGC 6 cut(s) 49, 63, 153, 231, 645, 1710
BspANI GGCC 4 cut(s) 99, 341, 387, 1009
BspCNI CTCAG 2 cut(s) 952, 958
BspFNI CGCG 3 cut(s) 51, 170, 172
BspLI GGNNCC 3 cut(s) 591, 711, 1169
BspMAI CTGCAG 1 cut(s) 1128
BspMI ACCTGC 1 cut(s) 766
BspPI GGATC 1 cut(s) 1155
BspT104I TTCGAA 1 cut(s) 288
BspT107I GGYRCC 2 cut(s) 589, 1167
BspTI CTTAAG 2 cut(s) 596, 1658
BspTNI GGTCTC 1 cut(s) 195
BsrBI CCGCTC 1 cut(s) 645
BsrDI GCAATG 2 cut(s) 288, 1825
BsrFI RCCGGY 1 cut(s) 1355
BssAI RCCGGY 1 cut(s) 1355
BssECI CCNNGG 2 cut(s) 435, 1670
BssHII GCGCGC 1 cut(s) 170
BssMI GATC 4 cut(s) 982, 1088, 1147, 1291
BssNI GRCGYC 1 cut(s) 46
BssSI CACGAG 2 cut(s) 211, 477
Bst2BI CACGAG 2 cut(s) 211, 477
Bst2UI CCWGG 4 cut(s) 437, 547, 1428, 1671
Bst4CI ACNGT 4 cut(s) 653, 1338, 1568, 1726
Bst6I CTCTTC 3 cut(s) 898, 1543, 1748
BstACI GRCGYC 1 cut(s) 46
BstAFI CTTAAG 2 cut(s) 596, 1658
BstBI TTCGAA 1 cut(s) 288
BstDEI CTNAG 4 cut(s) 876, 945, 960, 1154
BstF5I GGATG 5 cut(s) 142, 301, 1222, 1489, 1507
BstFNI CGCG 3 cut(s) 51, 170, 172
BstHHI GCGC 3 cut(s) 41, 172, 174
BstKTI GATC 4 cut(s) 985, 1091, 1150, 1294
BstMAI GTCTC 5 cut(s) 15, 195, 214, 684, 1475
BstMBI GATC 4 cut(s) 982, 1088, 1147, 1291
BstMWI GCNNNNNNNGC 6 cut(s) 45, 752, 772, 965, 1210, 1621
BstNI CCWGG 4 cut(s) 437, 547, 1428, 1671
BstNSI RCATGY 1 cut(s) 1140
BstSCI CCNGG 5 cut(s) 174, 435, 545, 1426, 1669
BstSFI CTRYAG 1 cut(s) 1124
BstSLI GKGCMC 2 cut(s) 117, 1170
BstUI CGCG 3 cut(s) 51, 170, 172
BstV1I GCAGC 9 cut(s) 316, 859, 953, 1007, 1138, 1244, 1624, 1641, 1755
BstV2I GAAGAC 2 cut(s) 171, 1323
BstX2I RGATCY 2 cut(s) 1088, 1147
BstYI RGATCY 2 cut(s) 1088, 1147
BsuRI GGCC 4 cut(s) 99, 341, 387, 1009
BtrI CACGTC 1 cut(s) 1076
BtsCI GGATG 5 cut(s) 142, 301, 1222, 1489, 1507
BtsI GCAGTG 1 cut(s) 762
BtsIMutI CAGTG 1 cut(s) 762
BveI ACCTGC 1 cut(s) 766
CaiI CAGNNNCTG 1 cut(s) 1676
CfoI GCGC 3 cut(s) 41, 172, 174
Cfr10I RCCGGY 1 cut(s) 1355
Cfr13I GGNCC 4 cut(s) 97, 310, 709, 1594
CseI GACGC 3 cut(s) 54, 176, 238
Csp6I GTAC 3 cut(s) 590, 638, 1648
CviAII CATG 7 cut(s) 271, 383, 782, 1052, 1137, 1259, 1583
CviQI GTAC 3 cut(s) 590, 638, 1648
DdeI CTNAG 4 cut(s) 876, 945, 960, 1154
DpnI GATC 4 cut(s) 984, 1090, 1149, 1293
DpnII GATC 4 cut(s) 982, 1088, 1147, 1291
EaeI YGGCCR 1 cut(s) 385
Eam1104I CTCTTC 3 cut(s) 898, 1543, 1748
EarI CTCTTC 3 cut(s) 898, 1543, 1748
Eco147I AGGCCT 1 cut(s) 341
Eco31I GGTCTC 1 cut(s) 195
Eco32I GATATC 1 cut(s) 627
Eco47I GGWCC 3 cut(s) 310, 709, 1594
Eco88I CYCGRG 1 cut(s) 1162
EcoRII CCWGG 4 cut(s) 435, 545, 1426, 1669
EcoRV GATATC 1 cut(s) 627
EcoT22I ATGCAT 1 cut(s) 900
Esp3I CGTCTC 2 cut(s) 15, 684
FaeI CATG 7 cut(s) 274, 386, 785, 1055, 1140, 1262, 1586
FaqI GGGAC 5 cut(s) 236, 418, 1086, 1687, 1772
FatI CATG 7 cut(s) 270, 382, 781, 1051, 1136, 1258, 1582
FbaI TGATCA 1 cut(s) 982
FokI GGATG 5 cut(s) 149, 308, 1229, 1476, 1514
FspBI CTAG 4 cut(s) 158, 242, 788, 836
GlaI GCGC 3 cut(s) 40, 171, 173
GsuI CTGGAG 1 cut(s) 709
HaeIII GGCC 4 cut(s) 99, 341, 387, 1009
HapII CCGG 7 cut(s) 175, 308, 512, 999, 1214, 1356, 1476
HgaI GACGC 3 cut(s) 54, 176, 238
HhaI GCGC 3 cut(s) 41, 172, 174
Hin1I GRCGYC 1 cut(s) 46
Hin1II CATG 7 cut(s) 274, 386, 785, 1055, 1140, 1262, 1586
Hin6I GCGC 3 cut(s) 39, 170, 172
HinP1I GCGC 3 cut(s) 39, 170, 172
HindIII AAGCTT 3 cut(s) 966, 1179, 1303
HinfI GANTC 5 cut(s) 290, 491, 809, 1196, 1278
HpaII CCGG 7 cut(s) 175, 308, 512, 999, 1214, 1356, 1476
HphI GGTGA 1 cut(s) 220
Hpy166II GTNNAC 1 cut(s) 709
Hpy188I TCNGA 6 cut(s) 295, 531, 565, 987, 1088, 1686
Hpy188III TCNNGA 3 cut(s) 410, 504, 1772
Hpy8I GTNNAC 1 cut(s) 709
Hpy99I CGWCG 2 cut(s) 48, 188
HpyAV CCTTC 4 cut(s) 549, 1332, 1492, 1597
HpyCH4III ACNGT 4 cut(s) 653, 1338, 1568, 1726
HpyCH4IV ACGT 2 cut(s) 1075, 1377
HpyF10VI GCNNNNNNNGC 6 cut(s) 45, 752, 772, 965, 1210, 1621
HpyF3I CTNAG 4 cut(s) 876, 945, 960, 1154
HpySE526I ACGT 2 cut(s) 1075, 1377
Hsp92I GRCGYC 1 cut(s) 46
Hsp92II CATG 7 cut(s) 274, 386, 785, 1055, 1140, 1262, 1586
HspAI GCGC 3 cut(s) 39, 170, 172
KpnI GGTACC 1 cut(s) 593
Ksp22I TGATCA 1 cut(s) 982
Kzo9I GATC 4 cut(s) 982, 1088, 1147, 1291
LmnI GCTCC 2 cut(s) 737, 763
Lsp1109I GCAGC 9 cut(s) 316, 859, 953, 1007, 1138, 1244, 1624, 1641, 1755
LweI GCATC 6 cut(s) 127, 556, 649, 907, 1522, 1765
MaeI CTAG 4 cut(s) 158, 242, 788, 836
MaeII ACGT 2 cut(s) 1075, 1377
MaeIII GTNAC 3 cut(s) 860, 1018, 1328
MalI GATC 4 cut(s) 984, 1090, 1149, 1293
MbiI CCGCTC 1 cut(s) 645
MboI GATC 4 cut(s) 982, 1088, 1147, 1291
MboII GAAGA 8 cut(s) 176, 915, 1142, 1328, 1432, 1560, 1691, 1765
MfeI CAATTG 1 cut(s) 495
MflI RGATCY 2 cut(s) 1088, 1147
MhlI GDGCHC 3 cut(s) 117, 1081, 1170
MluCI AATT 6 cut(s) 222, 495, 601, 748, 930, 1733
MlyI GAGTC 1 cut(s) 818
MmeI TCCRAC 4 cut(s) 593, 715, 741, 1009
Mph1103I ATGCAT 1 cut(s) 900
MseI TTAA 7 cut(s) 426, 597, 1241, 1301, 1307, 1416, 1659
MslI CAYNNNNRTG 1 cut(s) 1173
MspCI CTTAAG 2 cut(s) 596, 1658
MspI CCGG 7 cut(s) 175, 308, 512, 999, 1214, 1356, 1476
MspR9I CCNGG 5 cut(s) 176, 437, 547, 1428, 1671
MunI CAATTG 1 cut(s) 495
Mva1269I GAATGC 1 cut(s) 900
MvaI CCWGG 4 cut(s) 437, 547, 1428, 1671
MvnI CGCG 3 cut(s) 51, 170, 172
MwoI GCNNNNNNNGC 6 cut(s) 45, 752, 772, 965, 1210, 1621
NciI CCSGG 1 cut(s) 176
NdeII GATC 4 cut(s) 982, 1088, 1147, 1291
NlaIII CATG 7 cut(s) 274, 386, 785, 1055, 1140, 1262, 1586
NlaIV GGNNCC 3 cut(s) 591, 711, 1169
NmuCI GTSAC 2 cut(s) 860, 1018
NsiI ATGCAT 1 cut(s) 900
NspI RCATGY 1 cut(s) 1140
NspV TTCGAA 1 cut(s) 288
PauI GCGCGC 1 cut(s) 170
PceI AGGCCT 1 cut(s) 341
PcsI WCGNNNNNNNCGW 1 cut(s) 898
PctI GAATGC 1 cut(s) 900
PfeI GAWTC 4 cut(s) 290, 491, 1196, 1278
Pfl23II CGTACG 1 cut(s) 1647
PflFI GACNNNGTC 1 cut(s) 206
PleI GAGTC 1 cut(s) 817
PpsI GAGTC 1 cut(s) 817
Psp6I CCWGG 4 cut(s) 435, 545, 1426, 1669
PspGI CCWGG 4 cut(s) 435, 545, 1426, 1669
PspLI CGTACG 1 cut(s) 1647
PspN4I GGNNCC 3 cut(s) 591, 711, 1169
PspPI GGNCC 4 cut(s) 97, 310, 709, 1594
PstI CTGCAG 1 cut(s) 1128
PstNI CAGNNNCTG 1 cut(s) 1676
PsuI RGATCY 2 cut(s) 1088, 1147
PsyI GACNNNGTC 1 cut(s) 206
PteI GCGCGC 1 cut(s) 170
RsaI GTAC 3 cut(s) 591, 639, 1649
RsaNI GTAC 3 cut(s) 590, 638, 1648
RseI CAYNNNNRTG 1 cut(s) 1173
SaqAI TTAA 7 cut(s) 426, 597, 1241, 1301, 1307, 1416, 1659
Sau3AI GATC 4 cut(s) 982, 1088, 1147, 1291
Sau96I GGNCC 4 cut(s) 97, 310, 709, 1594
SchI GAGTC 1 cut(s) 818
ScrFI CCNGG 5 cut(s) 176, 437, 547, 1428, 1671
SduI GDGCHC 3 cut(s) 117, 1081, 1170
SfaNI GCATC 6 cut(s) 127, 556, 649, 907, 1522, 1765
SfcI CTRYAG 1 cut(s) 1124
SfuI TTCGAA 1 cut(s) 288
SinI GGWCC 3 cut(s) 310, 709, 1594
SmiMI CAYNNNNRTG 1 cut(s) 1173
SmlI CTYRAG 3 cut(s) 596, 1520, 1658
SmoI CTYRAG 3 cut(s) 596, 1520, 1658
SpeI ACTAGT 1 cut(s) 835
Sse9I AATT 6 cut(s) 222, 495, 601, 748, 930, 1733
SseBI AGGCCT 1 cut(s) 341
SsiI CCGC 6 cut(s) 49, 63, 153, 231, 645, 1710
SspMI CTAG 4 cut(s) 158, 242, 788, 836
StuI AGGCCT 1 cut(s) 341
StyD4I CCNGG 5 cut(s) 174, 435, 545, 1426, 1669
TaaI ACNGT 4 cut(s) 653, 1338, 1568, 1726
TaiI ACGT 2 cut(s) 1078, 1380
TaqI TCGA 6 cut(s) 162, 183, 288, 892, 901, 1771
TasI AATT 6 cut(s) 222, 495, 601, 748, 930, 1733
TauI GCSGC 1 cut(s) 51
TfiI GAWTC 4 cut(s) 290, 491, 1196, 1278
Tru1I TTAA 7 cut(s) 426, 597, 1241, 1301, 1307, 1416, 1659
Tru9I TTAA 7 cut(s) 426, 597, 1241, 1301, 1307, 1416, 1659
TscAI CASTG 1 cut(s) 762
TseFI GTSAC 2 cut(s) 860, 1018
TseI GCWGC 9 cut(s) 304, 872, 941, 995, 1126, 1232, 1612, 1654, 1743
Tsp45I GTSAC 2 cut(s) 860, 1018
TspDTI ATGAA 6 cut(s) 770, 1191, 1233, 1511, 1599, 1726
TspRI CASTG 1 cut(s) 762
Tth111I GACNNNGTC 1 cut(s) 206
Vha464I CTTAAG 2 cut(s) 596, 1658
VpaK11BI GGWCC 3 cut(s) 310, 709, 1594
XapI RAATTY 2 cut(s) 601, 1733
XceI RCATGY 1 cut(s) 1140
XcmI CCANNNNNNNNNTGG 1 cut(s) 130
XspI CTAG 4 cut(s) 158, 242, 788, 836
Zsp2I ATGCAT 1 cut(s) 900
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.