Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0003020

Physical Location & Seq

Genomic Coordinates Reverse (-)

17801111 .. 17804307

Gene Structure 3197 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g14210.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2517 bp

ATGGTTCTGCATAATTCTGCAGAAGGGGAAGAACGAAGCATTCGGCTGCAGATTTCTGACCTTCAGAGGCTCAGCGAGACCGGCAGTGTAGGCAACACAATGTTTCAGCCACAAACTAGTATTGAGAAAAGAGAGAGCAACACTTCAGCTTCTGTTGGTCCATTAACAAAGCCAACAGTTCGTGCACCTGAAAAGAAGCTGACCCTATTCGCTCTCCGGCTAGCAGTTCTCGAGAAAACAGCAACCGGCCTTGGAACTCTCGGATTCATATGGGCCACAGTTGTTCTTCTAGGTGGTTTTGCCATTACATTAGACAAAACTGACTTTTGGTTCATTACCATCATTTTGTTGATTGAAGGGACCCGGATTTTCAGCAGGAGTCATGAGCTTGAGTGGCAGCATCAAGCCACATGGTCCATCACTGAATCTGGAATCAACAGCTTTCGAGCAATGAGAATGAGCTCGAGCTTCATATTTGGGAGCATCAAGGAGCTTTTCAAGCCTGTTCTTCCAGTCAGGAAGAAAAGGCAAAGCAGCAGTCAGACTGCAGTGATTAATGCTGCAAGAAACTTGACAGGTTTCAATGTTCAAGGAAAGACTACTAGGACTTGGACAAGCTCAGAAGTCCCTCTCCTTCCATATGCTCAATGGGTTTTTCGGGCGAGACACATCAGCAAATTGCTCTATTGGCTTCAGCTTTTATCAGCTTCAGCTTGTATTTCTCTTTCATTGATGAAGCTCATCAAGCACAATTATGGTGATGTGGAGAAAGGAGACACTGACAAGAGGAACCGGCAAGCTGCTCTGAGTGTTTTCTACTCCTTGGCCTTGGCAGAAGCTTTGCTGTTTCTGCTGGAGAAGTCTTACTGTGAGTACAAGGTGAGCTACTGTAAACTTTTGGAAGAGGTGAACAAGGAGTGTGAGTTAGGCCCTTCAGGTTTGGTTTCGATTAGGAGGTTCTTCTATGATGCCTATTCAAGATGTGTCAATGGAAGCATTTTTGATGGCTTAAAGATGGATATGGTGTCTTTTGGCATGGACCTATTGGGTTCAAATTCCACAGATGAGCAGCTCATTGGGGCTAAAATTCTTTGCCAATTCGCTATGAGCCCCCGGTATTCAGATGACACCTTACAGAAGATAGGAATAAATTTATCAGTTATAGAGCGATTGGTTGAGATACTGAATTGGACTGATCCAGATGAAGAAGTGATTAGACAATCGGCTGCGGAAATACTGTCAAAACTGGCTGGCAAGAAGCAGAACTCTATCCGAGTTGCTGGAATTCCTGGTGCAATGGAATCAATTTCATCTCTGCTTCAAACCAGCCGAAGCTCCAGTGGTGCATGTGATGAAATTAGTGAAAAGGAAACACATTCCGATCATGCTAACTATGGTTTGTGGACATTCAACCATTTAGGCCTGCTTATTTTGAAGAAACTTGCGCGTGATCACGATAACTCAGGCAAGATTGGAAACACAAGAGGCCTCCTGCCAAAGATCATAGATTTCACACATGCTGAGGAGGTGTTGCTCCAGGCAGAAAATGTTACACCAACTAAGCTACTGACGCTGAAGCGATCATTGCAATTGGTGAAGAGGCTTGTGAGCACAACAGGCAACACAGGAAAGAATCTCCGGAGAGAGATTTCGGAGATAATTTTCACAATCAGCAATATCAGAGATATCTTGAGGCATGGTGAGAAGCATCCAAACCTGCAATTATTGGGCATTGAGATCTTATCTAGTTTAGCACTGGAGCAGGAAGCAACAGAGATAATAGGGGGAACAGGTGGAGTGCTTAAGGAGTTGTTCAACATTTTCCTTAAGAGGGAAAGGGAAAGGGAGGAAATTGTAGTCACTAATAAAGAGGTTATAAATAGAGCTGGAGAAGCTCTAGCAATGCTGGTATTGGAAAGCAAGAACAACTGTCATCGTATCTTGAAGTTGCGAGTAGTAGATAGCCTTGTAGTAGCTCTTGATTCTCCATTGATTCGCATCAATGCTGCTAGAATCTTGAGGAACTTGTGCACATACAGTGGCACAAACTGTTTCAACCAGCTTAAGGGAATTGCAAATGGAGCACCTACAGTGCTCAAAAAAATCATGTCAGAAGAGCACAAACTAAAGGAAGTAATGGTTGGACTAGCTCCACATGTTTTATCATTCTTGTCTCCCGAAGAATCAAGCCTTGTGTTTGAGAGAGCTGGAGTTACGGAGGCAGAAGTAGCTTACGAATTAGTTGAGAGTCTGAGGAAGTATAGACACCCGCGAATTAAAGTTCCAAGAATGAGGAGGTTTGCCATAGAGCTGGCAATTTGGATGATGAAAGACAAACATAAAAATCTTCAAATATTCAAGGAATTGGGGATGGAAAAGGAGCTCGAACATGTGCTGGAGACCACAGCCGAGATAGAAAGTTTCAACATTTTCTCTGGTACTGTGGGAATGAGCAGGCACAACACTACAATTCATTCATTGGTAGAAACTGCTTTAGAGTTATTAAGTGCTGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

839

Amino Acids

93.92

Weight (kDa)

8.81

Isoelectric Point (pI)

46.47

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003020)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G06210 AT3G06210 AT5G18980 AT5G18980 AT5G18980
fragaria_vesca	FvH4_4g14210
malus_domestica	MD12G1098300.v1.1 MD13G1180800.v1.1 MD16G1181500.v1.1
prunus_persica	Prupe.1G148900_v2.0.a1
pyrus_communis	pycom13g15600 pycom16g15230
rosa_chinensis	RchiOBHm_Chr4g0418921 RchiOBHm_Chr4g0418961 RchiOBHm_Chr4g0418981
rosa_laevigata	RLG00000007835 RLG00000007838
rosa_multiflora	Rmu_sc0000935.1_g000037 Rmu_sc0000935.1_g000062 Rmu_sc0001556.1_g000003
rosa_roxburghii	Rroxscaffold_5G00362050
rosa_rugosa	Rorug04G0155600 Rorug04G0155700
rosa_samantha	Rh4AG216900 Rh4AG217400 Rh4AG217700 Rh4BG212600 Rh4BG212700 Rh4BG213300 Rh4CG228700 Rh4CG229500 Rh4CG229600 Rh4DG215800 Rh4DG216200 Rh4DG216300
rosa_wichuraiana	Rw4G018550 Rw4G018590 Rw4G018600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1877
Acc36I	ACCTGC	1 cut(s)	1725
AccII	CGCG	2 cut(s)	1447, 2272
AccIII	TCCGGA	1 cut(s)	1638
AciI	CCGC	2 cut(s)	1229, 2270
AclWI	GGATC	1 cut(s)	1190
AcsI	RAATTY	4 cut(s)	1054, 1086, 1150, 1284
AcuI	CTGAAG	6 cut(s)	47, 129, 677, 693, 918, 1595
AfaI	GTAC	2 cut(s)	875, 2440
AfiI	CCNNNNNNNGG	2 cut(s)	1831, 2065
AflII	CTTAAG	3 cut(s)	1802, 1826, 2063
AflIII	ACRYGT	2 cut(s)	2155, 2389
AhlI	ACTAGT	1 cut(s)	116
AjnI	CCWGG	2 cut(s)	1288, 1536
AjuI	GAANNNNNNNTTGG	2 cut(s)	2124, 2156
Alw21I	GWGCWC	8 cut(s)	187, 464, 1613, 2033, 2086, 2097, 2121, 2385
Alw26I	GTCTC	5 cut(s)	71, 658, 768, 2178, 2393
Alw44I	GTGCAC	2 cut(s)	183, 2029
AlwI	GGATC	1 cut(s)	1190
AlwNI	CAGNNNCTG	1 cut(s)	152
Ama87I	CYCGRG	2 cut(s)	230, 463
Aor13HI	TCCGGA	1 cut(s)	1638
AoxI	GGCC	6 cut(s)	247, 273, 825, 928, 1420, 1486
ApaLI	GTGCAC	2 cut(s)	183, 2029
ApeKI	GCWGC	8 cut(s)	46, 397, 534, 560, 800, 1069, 1226, 2006
ApoI	RAATTY	4 cut(s)	1054, 1086, 1150, 1284
ArsI	GACNNNNNNTTYG	2 cut(s)	523, 555
AseI	ATTAAT	1 cut(s)	555
AspLEI	GCGC	1 cut(s)	1447
AspS9I	GGNCC	6 cut(s)	158, 273, 360, 414, 929, 1039
AsuC2I	CCSGG	2 cut(s)	364, 1114
AsuHPI	GGTGA	5 cut(s)	770, 892, 919, 1606, 1712
AsuNHI	GCTAGC	1 cut(s)	220
AvaI	CYCGRG	2 cut(s)	230, 463
AvaII	GGWCC	4 cut(s)	158, 360, 414, 1039
BaeGI	GKGCMC	2 cut(s)	187, 2033
BanII	GRGCYC	3 cut(s)	464, 1112, 2385
Bbv12I	GWGCWC	8 cut(s)	187, 464, 1613, 2033, 2086, 2097, 2121, 2385
BbvCI	CCTCAGC	1 cut(s)	1521
BbvI	GCAGC	8 cut(s)	33, 409, 546, 547, 787, 1081, 1213, 1993
BccI	CCATC	5 cut(s)	347, 425, 998, 1009, 2365
BciT130I	CCWGG	2 cut(s)	1290, 1538
BclI	TGATCA	1 cut(s)	1450
BcnI	CCSGG	2 cut(s)	364, 1114
BcoDI	GTCTC	5 cut(s)	71, 658, 768, 2178, 2393
BcuI	ACTAGT	1 cut(s)	116
BfaI	CTAG	8 cut(s)	117, 221, 290, 603, 1746, 1898, 2010, 2147
BfmI	CTRYAG	4 cut(s)	18, 47, 546, 2088
BfrI	CTTAAG	3 cut(s)	1802, 1826, 2063
BfuAI	ACCTGC	1 cut(s)	1725
BglII	AGATCT	1 cut(s)	1737
BisI	GCNGC	8 cut(s)	47, 398, 535, 561, 801, 1070, 1227, 2007
BlpI	GCTNAGC	1 cut(s)	71
BlsI	GCNGC	8 cut(s)	48, 399, 536, 562, 802, 1071, 1228, 2008
Bme1390I	CCNGG	4 cut(s)	364, 1114, 1290, 1538
Bme18I	GGWCC	4 cut(s)	158, 360, 414, 1039
BmeT110I	CYCGRG	2 cut(s)	230, 463
BmgT120I	GGNCC	6 cut(s)	158, 273, 360, 414, 929, 1039
BmiI	GGNNCC	3 cut(s)	361, 362, 791
BmrFI	CCNGG	4 cut(s)	364, 1114, 1290, 1538
BmsI	GCATC	5 cut(s)	409, 492, 958, 1717, 2007
BmtI	GCTAGC	1 cut(s)	224
BpmI	CTGGAG	7 cut(s)	875, 1321, 1520, 1778, 1908, 2229, 2417
Bpu10I	CCTNAGC	1 cut(s)	1521
Bpu1102I	GCTNAGC	1 cut(s)	71
BpuEI	CTTGAG	3 cut(s)	410, 1711, 2038
BpuMI	CCSGG	2 cut(s)	364, 1114
BsaBI	GATNNNNATC	1 cut(s)	1997
BsaI	GGTCTC	2 cut(s)	71, 2393
BsaJI	CCNNGG	4 cut(s)	250, 822, 828, 1112
BsaWI	WCCGGW	1 cut(s)	1638
BsaXI	ACNNNNNCTCC	2 cut(s)	908, 938
Bsc4I	CCNNNNNNNGG	2 cut(s)	1831, 2065
Bse118I	RCCGGY	3 cut(s)	80, 245, 792
Bse1I	ACTGG	4 cut(s)	512, 1251, 1338, 1761
Bse3DI	GCAATG	4 cut(s)	456, 1302, 1583, 1908
Bse8I	GATNNNNATC	1 cut(s)	1997
BseAI	TCCGGA	1 cut(s)	1638
BseBI	CCWGG	2 cut(s)	1290, 1538
BseDI	CCNNGG	4 cut(s)	250, 822, 828, 1112
BseGI	GGATG	3 cut(s)	1708, 2328, 2376
BseJI	GATNNNNATC	1 cut(s)	1997
BseLI	CCNNNNNNNGG	2 cut(s)	1831, 2065
BseMI	GCAATG	4 cut(s)	456, 1302, 1583, 1908
BseMII	CTCAG	6 cut(s)	85, 633, 797, 1476, 1512, 2243
BseNI	ACTGG	4 cut(s)	512, 1251, 1338, 1761
BseRI	GAGGAG	2 cut(s)	1538, 2308
BseSI	GKGCMC	2 cut(s)	187, 2033
BseXI	GCAGC	8 cut(s)	33, 409, 546, 547, 787, 1081, 1213, 1993
Bsh1236I	CGCG	2 cut(s)	1447, 2272
BshFI	GGCC	6 cut(s)	249, 275, 827, 930, 1422, 1488
BsiHKAI	GWGCWC	8 cut(s)	187, 464, 1613, 2033, 2086, 2097, 2121, 2385
BsiHKCI	CYCGRG	2 cut(s)	230, 463
BsiSI	CCGG	7 cut(s)	81, 217, 246, 364, 793, 1114, 1639
BslFI	GGGAC	2 cut(s)	373, 611
BslI	CCNNNNNNNGG	2 cut(s)	1831, 2065
BsmAI	GTCTC	5 cut(s)	71, 658, 768, 2178, 2393
BsmFI	GGGAC	2 cut(s)	373, 611
BsmI	GAATGC	1 cut(s)	39
BsnI	GGCC	6 cut(s)	249, 275, 827, 930, 1422, 1488
Bso31I	GGTCTC	2 cut(s)	71, 2393
BsoBI	CYCGRG	2 cut(s)	230, 463
Bsp1286I	GDGCHC	9 cut(s)	187, 464, 1112, 1613, 2033, 2086, 2097, 2121, 2385
Bsp13I	TCCGGA	1 cut(s)	1638
Bsp143I	GATC	6 cut(s)	1195, 1381, 1450, 1500, 1580, 1737
Bsp1720I	GCTNAGC	1 cut(s)	71
BspACI	CCGC	2 cut(s)	1229, 2270
BspANI	GGCC	6 cut(s)	249, 275, 827, 930, 1422, 1488
BspCNI	CTCAG	6 cut(s)	84, 632, 798, 1475, 1513, 2244
BspEI	TCCGGA	1 cut(s)	1638
BspFNI	CGCG	2 cut(s)	1447, 2272
BspHI	TCATGA	1 cut(s)	382
BspLI	GGNNCC	3 cut(s)	361, 362, 791
BspMAI	CTGCAG	3 cut(s)	22, 51, 550
BspMI	ACCTGC	1 cut(s)	1725
BspOI	GCTAGC	1 cut(s)	224
BspPI	GGATC	1 cut(s)	1190
BspQI	GCTCTTC	1 cut(s)	2109
BspTI	CTTAAG	3 cut(s)	1802, 1826, 2063
BspTNI	GGTCTC	2 cut(s)	71, 2393
BsrDI	GCAATG	4 cut(s)	456, 1302, 1583, 1908
BsrFI	RCCGGY	3 cut(s)	80, 245, 792
BsrI	ACTGG	4 cut(s)	512, 1251, 1338, 1761
BssAI	RCCGGY	3 cut(s)	80, 245, 792
BssECI	CCNNGG	4 cut(s)	250, 822, 828, 1112
BssMI	GATC	6 cut(s)	1195, 1381, 1450, 1500, 1580, 1737
BssT1I	CCWWGG	3 cut(s)	250, 822, 828
Bst2UI	CCWGG	2 cut(s)	1290, 1538
Bst6I	CTCTTC	3 cut(s)	897, 1592, 2109
BstAFI	CTTAAG	3 cut(s)	1802, 1826, 2063
BstC8I	GCNNGC	6 cut(s)	222, 798, 1252, 1424, 2313, 2456
BstDEI	CTNAG	7 cut(s)	71, 619, 806, 1462, 1521, 1560, 2252
BstF5I	GGATG	3 cut(s)	1708, 2328, 2376
BstFNI	CGCG	2 cut(s)	1447, 2272
BstHHI	GCGC	1 cut(s)	1447
BstKTI	GATC	6 cut(s)	1198, 1384, 1453, 1503, 1583, 1740
BstMAI	GTCTC	5 cut(s)	71, 658, 768, 2178, 2393
BstMBI	GATC	6 cut(s)	1195, 1381, 1450, 1500, 1580, 1737
BstNI	CCWGG	2 cut(s)	1290, 1538
BstNSI	RCATGY	4 cut(s)	1350, 1520, 2159, 2393
BstSCI	CCNGG	4 cut(s)	362, 1112, 1288, 1536
BstSFI	CTRYAG	4 cut(s)	18, 47, 546, 2088
BstSLI	GKGCMC	2 cut(s)	187, 2033
BstUI	CGCG	2 cut(s)	1447, 2272
BstV1I	GCAGC	8 cut(s)	33, 409, 546, 547, 787, 1081, 1213, 1993
BstX2I	RGATCY	1 cut(s)	1737
BstXI	CCANNNNNNTGG	1 cut(s)	2311
BstYI	RGATCY	1 cut(s)	1737
BsuRI	GGCC	6 cut(s)	249, 275, 827, 930, 1422, 1488
BtsCI	GGATG	3 cut(s)	1708, 2328, 2376
BtsI	GCAGTG	2 cut(s)	91, 555
BtsIMutI	CAGTG	8 cut(s)	91, 420, 555, 777, 1345, 1754, 2044, 2097
BveI	ACCTGC	1 cut(s)	1725
Cac8I	GCNNGC	6 cut(s)	222, 798, 1252, 1424, 2313, 2456
CaiI	CAGNNNCTG	1 cut(s)	152
CciI	TCATGA	1 cut(s)	382
CfoI	GCGC	1 cut(s)	1447
Cfr10I	RCCGGY	3 cut(s)	80, 245, 792
Cfr13I	GGNCC	6 cut(s)	158, 273, 360, 414, 929, 1039
CseI	GACGC	1 cut(s)	1579
Csp6I	GTAC	2 cut(s)	874, 2439
CviQI	GTAC	2 cut(s)	874, 2439
DdeI	CTNAG	7 cut(s)	71, 619, 806, 1462, 1521, 1560, 2252
DpnI	GATC	6 cut(s)	1197, 1383, 1452, 1502, 1582, 1739
DpnII	GATC	6 cut(s)	1195, 1381, 1450, 1500, 1580, 1737
Eam1104I	CTCTTC	3 cut(s)	897, 1592, 2109
EarI	CTCTTC	3 cut(s)	897, 1592, 2109
Ecl136II	GAGCTC	2 cut(s)	462, 2383
Eco130I	CCWWGG	3 cut(s)	250, 822, 828
Eco147I	AGGCCT	2 cut(s)	1422, 1488
Eco24I	GRGCYC	3 cut(s)	464, 1112, 2385
Eco31I	GGTCTC	2 cut(s)	71, 2393
Eco32I	GATATC	1 cut(s)	1687
Eco47I	GGWCC	4 cut(s)	158, 360, 414, 1039
Eco53kI	GAGCTC	2 cut(s)	462, 2383
Eco57I	CTGAAG	6 cut(s)	47, 129, 677, 693, 918, 1595
Eco88I	CYCGRG	2 cut(s)	230, 463
EcoICRI	GAGCTC	2 cut(s)	462, 2383
EcoO109I	RGGNCCY	2 cut(s)	360, 929
EcoRI	GAATTC	1 cut(s)	1284
EcoRII	CCWGG	2 cut(s)	1288, 1536
EcoRV	GATATC	1 cut(s)	1687
EcoT14I	CCWWGG	3 cut(s)	250, 822, 828
EcoT38I	GRGCYC	3 cut(s)	464, 1112, 2385
ErhI	CCWWGG	3 cut(s)	250, 822, 828
FaqI	GGGAC	2 cut(s)	373, 611
FauI	CCCGC	1 cut(s)	2277
FauNDI	CATATG	2 cut(s)	269, 640
FbaI	TGATCA	1 cut(s)	1450
Fnu4HI	GCNGC	8 cut(s)	47, 398, 535, 561, 801, 1070, 1227, 2007
FokI	GGATG	3 cut(s)	1695, 2335, 2383
FriOI	GRGCYC	3 cut(s)	464, 1112, 2385
Fsp4HI	GCNGC	8 cut(s)	47, 398, 535, 561, 801, 1070, 1227, 2007
FspBI	CTAG	8 cut(s)	117, 221, 290, 603, 1746, 1898, 2010, 2147
GlaI	GCGC	1 cut(s)	1446
GluI	GCNGC	8 cut(s)	47, 398, 535, 561, 801, 1070, 1227, 2007
GsuI	CTGGAG	7 cut(s)	875, 1321, 1520, 1778, 1908, 2229, 2417
HaeIII	GGCC	6 cut(s)	249, 275, 827, 930, 1422, 1488
HapII	CCGG	7 cut(s)	81, 217, 246, 364, 793, 1114, 1639
HgaI	GACGC	1 cut(s)	1579
HhaI	GCGC	1 cut(s)	1447
Hin6I	GCGC	1 cut(s)	1445
HinP1I	GCGC	1 cut(s)	1445
HindIII	AAGCTT	1 cut(s)	837
HpaII	CCGG	7 cut(s)	81, 217, 246, 364, 793, 1114, 1639
HphI	GGTGA	5 cut(s)	770, 892, 919, 1606, 1712
Hpy166II	GTNNAC	5 cut(s)	185, 893, 910, 1404, 2031
Hpy8I	GTNNAC	5 cut(s)	185, 893, 910, 1404, 2031
HpyAV	CCTTC	5 cut(s)	17, 71, 350, 644, 942
HpyF3I	CTNAG	7 cut(s)	71, 619, 806, 1462, 1521, 1560, 2252
HspAI	GCGC	1 cut(s)	1445
KflI	GGGWCCC	1 cut(s)	360
Kpn2I	TCCGGA	1 cut(s)	1638
Ksp22I	TGATCA	1 cut(s)	1450
Kzo9I	GATC	6 cut(s)	1195, 1381, 1450, 1500, 1580, 1737
LguI	GCTCTTC	1 cut(s)	2109
LmnI	GCTCC	8 cut(s)	480, 490, 1340, 1539, 1759, 2081, 2155, 2380
Lsp1109I	GCAGC	8 cut(s)	33, 409, 546, 547, 787, 1081, 1213, 1993
LweI	GCATC	5 cut(s)	409, 492, 958, 1717, 2007
MaeI	CTAG	8 cut(s)	117, 221, 290, 603, 1746, 1898, 2010, 2147
MaeIII	GTNAC	3 cut(s)	1549, 1858, 2212
MalI	GATC	6 cut(s)	1197, 1383, 1452, 1502, 1582, 1739
MboI	GATC	6 cut(s)	1195, 1381, 1450, 1500, 1580, 1737
MfeI	CAATTG	1 cut(s)	1589
MflI	RGATCY	1 cut(s)	1737
MhlI	GDGCHC	9 cut(s)	187, 464, 1112, 1613, 2033, 2086, 2097, 2121, 2385
MlyI	GAGTC	2 cut(s)	388, 2257
MmeI	TCCRAC	1 cut(s)	2122
MroI	TCCGGA	1 cut(s)	1638
MseI	TTAA	8 cut(s)	164, 555, 1010, 1803, 1827, 2064, 2277, 2504
MslI	CAYNNNNRTG	1 cut(s)	753
MspCI	CTTAAG	3 cut(s)	1802, 1826, 2063
MspI	CCGG	7 cut(s)	81, 217, 246, 364, 793, 1114, 1639
MspR9I	CCNGG	4 cut(s)	364, 1114, 1290, 1538
MunI	CAATTG	1 cut(s)	1589
Mva1269I	GAATGC	1 cut(s)	39
MvaI	CCWGG	2 cut(s)	1290, 1538
MvnI	CGCG	2 cut(s)	1447, 2272
NciI	CCSGG	2 cut(s)	364, 1114
NdeI	CATATG	2 cut(s)	269, 640
NdeII	GATC	6 cut(s)	1195, 1381, 1450, 1500, 1580, 1737
NheI	GCTAGC	1 cut(s)	220
NlaIV	GGNNCC	3 cut(s)	361, 362, 791
NmeAIII	GCCGAG	1 cut(s)	2434
NmuCI	GTSAC	1 cut(s)	1858
NspI	RCATGY	4 cut(s)	1350, 1520, 2159, 2393
PaeR7I	CTCGAG	2 cut(s)	230, 463
PagI	TCATGA	1 cut(s)	382
PceI	AGGCCT	2 cut(s)	1422, 1488
PciI	ACATGT	2 cut(s)	2155, 2389
PciSI	GCTCTTC	1 cut(s)	2109
PctI	GAATGC	1 cut(s)	39
PfeI	GAWTC	9 cut(s)	264, 425, 432, 1301, 1633, 1982, 1993, 2013, 2183
PkrI	GCNGC	8 cut(s)	48, 399, 536, 562, 802, 1071, 1228, 2008
PleI	GAGTC	2 cut(s)	387, 2256
PpsI	GAGTC	2 cut(s)	387, 2256
PpuMI	RGGWCCY	1 cut(s)	360
PscI	ACATGT	2 cut(s)	2155, 2389
PshBI	ATTAAT	1 cut(s)	555
PsiI	TTATAA	1 cut(s)	1877
Psp124BI	GAGCTC	2 cut(s)	464, 2385
Psp5II	RGGWCCY	1 cut(s)	360
Psp6I	CCWGG	2 cut(s)	1288, 1536
PspGI	CCWGG	2 cut(s)	1288, 1536
PspN4I	GGNNCC	3 cut(s)	361, 362, 791
PspPI	GGNCC	6 cut(s)	158, 273, 360, 414, 929, 1039
PspPPI	RGGWCCY	1 cut(s)	360
PspXI	VCTCGAGB	1 cut(s)	463
PstI	CTGCAG	3 cut(s)	22, 51, 550
PstNI	CAGNNNCTG	1 cut(s)	152
PsuI	RGATCY	1 cut(s)	1737
RsaI	GTAC	2 cut(s)	875, 2440
RsaNI	GTAC	2 cut(s)	874, 2439
RseI	CAYNNNNRTG	1 cut(s)	753
SacI	GAGCTC	2 cut(s)	464, 2385
SapI	GCTCTTC	1 cut(s)	2109
SaqAI	TTAA	8 cut(s)	164, 555, 1010, 1803, 1827, 2064, 2277, 2504
SatI	GCNGC	8 cut(s)	47, 398, 535, 561, 801, 1070, 1227, 2007
Sau3AI	GATC	6 cut(s)	1195, 1381, 1450, 1500, 1580, 1737
Sau96I	GGNCC	6 cut(s)	158, 273, 360, 414, 929, 1039
SchI	GAGTC	2 cut(s)	388, 2257
ScrFI	CCNGG	4 cut(s)	364, 1114, 1290, 1538
SduI	GDGCHC	9 cut(s)	187, 464, 1112, 1613, 2033, 2086, 2097, 2121, 2385
SfaNI	GCATC	5 cut(s)	409, 492, 958, 1717, 2007
SfcI	CTRYAG	4 cut(s)	18, 47, 546, 2088
Sfr274I	CTCGAG	2 cut(s)	230, 463
SinI	GGWCC	4 cut(s)	158, 360, 414, 1039
SlaI	CTCGAG	2 cut(s)	230, 463
SmiMI	CAYNNNNRTG	1 cut(s)	753
SmlI	CTYRAG	8 cut(s)	230, 389, 463, 1690, 1802, 1826, 2017, 2063
SmoI	CTYRAG	8 cut(s)	230, 389, 463, 1690, 1802, 1826, 2017, 2063
SpeI	ACTAGT	1 cut(s)	116
SseBI	AGGCCT	2 cut(s)	1422, 1488
SsiI	CCGC	2 cut(s)	1229, 2270
SspI	AATATT	1 cut(s)	2355
SspMI	CTAG	8 cut(s)	117, 221, 290, 603, 1746, 1898, 2010, 2147
SstI	GAGCTC	2 cut(s)	464, 2385
StuI	AGGCCT	2 cut(s)	1422, 1488
StyD4I	CCNGG	4 cut(s)	362, 1112, 1288, 1536
StyI	CCWWGG	3 cut(s)	250, 822, 828
TaqI	TCGA	5 cut(s)	231, 445, 464, 947, 2385
TatI	WGTACW	1 cut(s)	873
TfiI	GAWTC	9 cut(s)	264, 425, 432, 1301, 1633, 1982, 1993, 2013, 2183
Tru1I	TTAA	8 cut(s)	164, 555, 1010, 1803, 1827, 2064, 2277, 2504
Tru9I	TTAA	8 cut(s)	164, 555, 1010, 1803, 1827, 2064, 2277, 2504
TscAI	CASTG	8 cut(s)	91, 427, 555, 784, 1345, 1761, 2044, 2097
TseFI	GTSAC	1 cut(s)	1858
TseI	GCWGC	8 cut(s)	46, 397, 534, 560, 800, 1069, 1226, 2006
Tsp45I	GTSAC	1 cut(s)	1858
TspGWI	ACGGA	1 cut(s)	2231
TspRI	CASTG	8 cut(s)	91, 427, 555, 784, 1345, 1761, 2044, 2097
Vha464I	CTTAAG	3 cut(s)	1802, 1826, 2063
VneI	GTGCAC	2 cut(s)	183, 2029
VpaK11BI	GGWCC	4 cut(s)	158, 360, 414, 1039
VspI	ATTAAT	1 cut(s)	555
XapI	RAATTY	4 cut(s)	1054, 1086, 1150, 1284
XceI	RCATGY	4 cut(s)	1350, 1520, 2159, 2393
XcmI	CCANNNNNNNNNTGG	1 cut(s)	645
XhoI	CTCGAG	2 cut(s)	230, 463
XspI	CTAG	8 cut(s)	117, 221, 290, 603, 1746, 1898, 2010, 2147

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.