Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4C

Orthogroup ID

OG0003020

Physical Location & Seq

Genomic Coordinates Forward (+)

46816468 .. 46819118

Gene Structure 2651 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4CG229600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2418 bp

ATGTTTCAGCCACAAACTAGTATCGAGAAGAAAGACAGCAACACTTCAGCTTTTGTTGGTCCATTAACAAAGCCAACAGTCAGTGCACCTGAAAAGAAGCTGACCCTTTTCGCTCTCCGCCTAGCAGTGCTCGAAAAAGCAGCTACTGGCCTTGGAACTCTTGGTTTCATCTGGGCCACGGTTGTTCTTCTTGGCGGTTTTGCTATTACTTTAGAAAATTCAGACTTCTGGTTCATCACCATCATTTTGTTGATTGAAGGGACTCGGATTTTCAGCAGGAGCCATGAGCTTGAGTGGCAGCATCAAGCCACATGGTCCATCACTGAGGCTGGGATCAACAGCTTTCGAGCAATGAGAATGAGTTCGAGCTTCATATTTGGGAGCATCAAGGCTTTTTTCAAGCCTGTTCTTCCAGTCAGGAAACAAAGTCAAATCAGTAGACAGACTGCAGGGATTAATGATGAAAGAAACTTGAGAGGTTTCAACGTTCAAGGAAAGACTATTCGGACTTGGAGAAGCTCAGAAGTCCCTCTCCTTCCATATGCTCATTGGGTTTTTCGGGCGAGACACATCAGCAAATTGCTCTATTGGCTTCAGCTTTTATCAGCTTCAGCTTGTATTGCTCTCTCATTGATGAAGCTCATAAAGCACAACTATGGTGATGTGGAGAAAGGAGACACTGACAAGAGGAACCGGAAAGCTGCTCTGAGTGTTTTCTATTCCTTGGCCTTGGCAGAAGCTTTGCTGTTTCTGATGGAGAAGACTTACTATGAGTACAAGGTGAGCTACTGTAAACTTTTGGAAGAGGTGACCAAGGAGTGTGAGTTGGACCGTTCAGGTTTGGTTTCGATTAGAAGGTTTTTCTATGATGCCTATTCAAAATGTGTCAATGGAAGCATTTTTGATGGCTTGAAGATGGATATGGTCTCTTATGGCATGGACCTATTGGGTTCAAATTCCACAGATGAGCAGCTTATTGGAGCTAAAATTCTTCACCAATTCGCTATGAGCCCCCGGTATTCAGATGACACATTACAGAAGATGGGGATAAATTTATCAGTTATAGAAAGATTGGTCGAGATACTGAATTGGACTGATCCAGATGAAGAAGCGATTAGACAATGGGCTGCAGAAATACTGTCAAAACTGGCTGGGAAGAAACAAAACTCTATCCGAGTAGCTGGAATTCCTGGTGCAATGGAATCAATTTCATCTCTGCTCCAAAGCAGCAGAAGCTCAAGTGGTGCATGTGATGAAATCAGTGAAAAGAAAACTCATTCTGATCATGGTAACTATGATTTGTGGACCTTCAACCATTTAGGCCTGCTTATTTTGAAGAAACTTGCACGTGATCTTGATAACTGTGGCAAGATTGGAAACACAAGAGGCCTCCTGCCAAAGATCATAGACTTCACACATGCTGAGGAGGTGTTGCCCAAGGCAGTAGATGTTACACCAGCTCAGCTACTGACGCTGAAGCGATCGTTGCAATTGGTGAAGAGGCTTGTAAGCACAACAGGCAACACAGGAAATATTCTCCGCAGAGAGATTTCGGAGATAGTTTTCACAATCAGCAATATCAGAGATATCTTGAAGCATGGTGAGAAGCATCCAAACCTGCAATTATTGGGTATTGAAATCTTATCTAGTCTAGCACTGGAAGAGGAAGCAACAGAGAGAATAGGAGGAACAGGTGGAGTGCTCAAGGGGTTGTTCAACATTTTCCTTCAAAAGGAAAGGGAAAGGGAGGAAATTGTGGTCACTAATAGAGAGGTAATAACTAGTGCTGGGGAAGCTCTAGCAATGCTGGTATTGGAAAGCAGGAACAACTGTCATCGTATCTTGAAGTTTTGTGTAGTGGACAGCCTTGTTGTAGCTCTTGATTCTCCATTGGTTCGCATCAATGCTGCTAGAGTTTTGAGGAACTTGTGCACATACAGTGGCAAAAACTGTTTCAACCAGCTCAAGGGAATTGCAAATGCAGCACCTACTGTGCTTAAGGAAATCATGTCAGAAGAGCACAAACTAAAGGAAGTAATGGTTGGACTAGCTCCACATGTTCTATCACTCTTGTCTCCCGAAGAATCAAGCCTCATGTTTGAGAGAGCTGGAGTTACAGAGGCAGAAGTCGCTTACGAATTAGTCGAGATTCTGAGGACGTACAGACACCCACGAATTAAAGTTCCAAGAATAAGGAGGTTTTCCATAGAGCTAGCAATTTGGATGATGAAACACAAACCTACAAATATTCAAAAATTCAAGGAATTGGGGATGGAAAAGGAGCTCGAACATGTGCTAGAGACCACAGCCGAGTTGGAAAGCTTCAACATTTTCTCTGGTACAGTGGGAATGAGCAGGCACAATACTACAATTCACTCATTGGTAGAAACTGCTTTAGAGTTGTTAACTGATGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

805

Amino Acids

90.51

Weight (kDa)

8.56

Isoelectric Point (pI)

46.24

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003020)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G06210 AT3G06210 AT5G18980 AT5G18980 AT5G18980
fragaria_vesca	FvH4_4g14210
malus_domestica	MD12G1098300.v1.1 MD13G1180800.v1.1 MD16G1181500.v1.1
prunus_persica	Prupe.1G148900_v2.0.a1
pyrus_communis	pycom13g15600 pycom16g15230
rosa_chinensis	RchiOBHm_Chr4g0418921 RchiOBHm_Chr4g0418961 RchiOBHm_Chr4g0418981
rosa_laevigata	RLG00000007835 RLG00000007838
rosa_multiflora	Rmu_sc0000935.1_g000037 Rmu_sc0000935.1_g000062 Rmu_sc0001556.1_g000003
rosa_roxburghii	Rroxscaffold_5G00362050
rosa_rugosa	Rorug04G0155600 Rorug04G0155700
rosa_samantha	Rh4AG216900 Rh4AG217400 Rh4AG217700 Rh4BG212600 Rh4BG212700 Rh4BG213300 Rh4CG228700 Rh4CG229500 Rh4CG229600 Rh4DG215800 Rh4DG216200 Rh4DG216300
rosa_wichuraiana	Rw4G018550 Rw4G018590 Rw4G018600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1626
AccI	GTMKAC	1 cut(s)	439
AciI	CCGC	3 cut(s)	118, 195, 1540
AclI	AACGTT	1 cut(s)	486
AclWI	GGATC	2 cut(s)	341, 1091
AcsI	RAATTY	6 cut(s)	217, 955, 987, 1051, 1185, 2255
AcuI	CTGAAG	4 cut(s)	30, 578, 594, 1496
AcvI	CACGTG	1 cut(s)	1349
AfaI	GTAC	3 cut(s)	776, 2162, 2341
AfiI	CCNNNNNNNGG	2 cut(s)	1732, 1966
AflII	CTTAAG	1 cut(s)	1997
AflIII	ACRYGT	2 cut(s)	2056, 2290
AhlI	ACTAGT	2 cut(s)	17, 1781
AjnI	CCWGG	1 cut(s)	1189
AjuI	GAANNNNNNNTTGG	2 cut(s)	2025, 2057
Alw21I	GWGCWC	6 cut(s)	88, 132, 1704, 1934, 2022, 2286
Alw26I	GTCTC	5 cut(s)	559, 669, 931, 2079, 2294
Alw44I	GTGCAC	2 cut(s)	84, 1930
AlwI	GGATC	2 cut(s)	341, 1091
AlwNI	CAGNNNCTG	2 cut(s)	146, 1468
AoxI	GGCC	5 cut(s)	148, 174, 726, 1321, 1387
ApaLI	GTGCAC	2 cut(s)	84, 1930
ApeKI	GCWGC	8 cut(s)	140, 298, 701, 970, 1127, 1227, 1907, 1982
ApoI	RAATTY	6 cut(s)	217, 955, 987, 1051, 1185, 2255
AseI	ATTAAT	1 cut(s)	456
Asp700I	GAANNNNTTC	1 cut(s)	361
AspS9I	GGNCC	6 cut(s)	59, 174, 315, 829, 940, 1305
AsuC2I	CCSGG	1 cut(s)	1015
AsuHPI	GGTGA	7 cut(s)	229, 671, 793, 820, 986, 1507, 1613
AsuNHI	GCTAGC	1 cut(s)	2212
AvaII	GGWCC	5 cut(s)	59, 315, 829, 940, 1305
BaeGI	GKGCMC	2 cut(s)	88, 1934
BanII	GRGCYC	2 cut(s)	1013, 2286
BbrPI	CACGTG	1 cut(s)	1349
BbsI	GAAGAC	1 cut(s)	767
Bbv12I	GWGCWC	6 cut(s)	88, 132, 1704, 1934, 2022, 2286
BbvCI	CCTCAGC	1 cut(s)	1422
BbvI	GCAGC	8 cut(s)	152, 310, 688, 982, 1114, 1239, 1894, 1994
BccI	CCATC	7 cut(s)	248, 326, 748, 899, 910, 1036, 2266
BciT130I	CCWGG	1 cut(s)	1191
BclI	TGATCA	1 cut(s)	1282
BcnI	CCSGG	1 cut(s)	1015
BcoDI	GTCTC	5 cut(s)	559, 669, 931, 2079, 2294
BcuI	ACTAGT	2 cut(s)	17, 1781
BfmI	CTRYAG	2 cut(s)	447, 1128
BfrI	CTTAAG	1 cut(s)	1997
BfuAI	ACCTGC	1 cut(s)	1626
BisI	GCNGC	8 cut(s)	141, 299, 702, 971, 1128, 1228, 1908, 1983
BlpI	GCTNAGC	1 cut(s)	1461
BlsI	GCNGC	8 cut(s)	142, 300, 703, 972, 1129, 1229, 1909, 1984
Bme1390I	CCNGG	2 cut(s)	1015, 1191
Bme18I	GGWCC	5 cut(s)	59, 315, 829, 940, 1305
BmgT120I	GGNCC	6 cut(s)	59, 174, 315, 829, 940, 1305
BmiI	GGNNCC	2 cut(s)	281, 692
BmrFI	CCNGG	2 cut(s)	1015, 1191
BmsI	GCATC	5 cut(s)	310, 393, 859, 1618, 1908
BmtI	GCTAGC	1 cut(s)	2216
BpiI	GAAGAC	1 cut(s)	767
BpmI	CTGGAG	1 cut(s)	2130
Bpu10I	CCTNAGC	1 cut(s)	1422
Bpu1102I	GCTNAGC	1 cut(s)	1461
BpuEI	CTTGAG	5 cut(s)	311, 493, 1222, 1688, 1949
BpuMI	CCSGG	1 cut(s)	1015
BsaAI	YACGTR	1 cut(s)	1349
BsaI	GGTCTC	2 cut(s)	931, 2294
BsaJI	CCNNGG	7 cut(s)	151, 177, 723, 729, 813, 1013, 1437
BsaWI	WCCGGW	1 cut(s)	693
BsaXI	ACNNNNNCTCC	2 cut(s)	809, 839
Bsc4I	CCNNNNNNNGG	2 cut(s)	1732, 1966
Bse1I	ACTGG	4 cut(s)	151, 413, 1152, 1662
Bse3DI	GCAATG	3 cut(s)	357, 1203, 1809
BseBI	CCWGG	1 cut(s)	1191
BseDI	CCNNGG	7 cut(s)	151, 177, 723, 729, 813, 1013, 1437
BseGI	GGATG	3 cut(s)	1609, 2229, 2277
BseLI	CCNNNNNNNGG	2 cut(s)	1732, 1966
BseMI	GCAATG	3 cut(s)	357, 1203, 1809
BseMII	CTCAG	6 cut(s)	315, 534, 698, 1413, 1475, 2144
BseNI	ACTGG	4 cut(s)	151, 413, 1152, 1662
BseRI	GAGGAG	1 cut(s)	1439
BseSI	GKGCMC	2 cut(s)	88, 1934
BseXI	GCAGC	8 cut(s)	152, 310, 688, 982, 1114, 1239, 1894, 1994
BseYI	CCCAGC	3 cut(s)	329, 1151, 1787
Bsh1285I	CGRYCG	1 cut(s)	1484
BshFI	GGCC	5 cut(s)	150, 176, 728, 1323, 1389
BsiEI	CGRYCG	1 cut(s)	1484
BsiHKAI	GWGCWC	6 cut(s)	88, 132, 1704, 1934, 2022, 2286
BsiSI	CCGG	2 cut(s)	694, 1015
BslFI	GGGAC	2 cut(s)	274, 512
BslI	CCNNNNNNNGG	2 cut(s)	1732, 1966
BsmAI	GTCTC	5 cut(s)	559, 669, 931, 2079, 2294
BsmFI	GGGAC	2 cut(s)	274, 512
BsnI	GGCC	5 cut(s)	150, 176, 728, 1323, 1389
Bso31I	GGTCTC	2 cut(s)	931, 2294
Bsp1286I	GDGCHC	7 cut(s)	88, 132, 1013, 1704, 1934, 2022, 2286
Bsp143I	GATC	6 cut(s)	333, 1096, 1282, 1351, 1401, 1481
Bsp1720I	GCTNAGC	1 cut(s)	1461
BspACI	CCGC	3 cut(s)	118, 195, 1540
BspANI	GGCC	5 cut(s)	150, 176, 728, 1323, 1389
BspCNI	CTCAG	6 cut(s)	316, 533, 699, 1414, 1474, 2145
BspLI	GGNNCC	2 cut(s)	281, 692
BspMAI	CTGCAG	2 cut(s)	451, 1132
BspMI	ACCTGC	1 cut(s)	1626
BspOI	GCTAGC	1 cut(s)	2216
BspPI	GGATC	2 cut(s)	341, 1091
BspQI	GCTCTTC	1 cut(s)	2010
BspTI	CTTAAG	1 cut(s)	1997
BspTNI	GGTCTC	2 cut(s)	931, 2294
BsrDI	GCAATG	3 cut(s)	357, 1203, 1809
BsrI	ACTGG	4 cut(s)	151, 413, 1152, 1662
BssECI	CCNNGG	7 cut(s)	151, 177, 723, 729, 813, 1013, 1437
BssMI	GATC	6 cut(s)	333, 1096, 1282, 1351, 1401, 1481
BssT1I	CCWWGG	5 cut(s)	151, 723, 729, 813, 1437
Bst2UI	CCWGG	1 cut(s)	1191
Bst6I	CTCTTC	4 cut(s)	798, 1493, 1656, 2010
BstAFI	CTTAAG	1 cut(s)	1997
BstBAI	YACGTR	1 cut(s)	1349
BstC8I	GCNNGC	3 cut(s)	1325, 2214, 2357
BstDEI	CTNAG	6 cut(s)	324, 520, 707, 1422, 1461, 2153
BstDSI	CCRYGG	1 cut(s)	177
BstEII	GGTNACC	1 cut(s)	808
BstENI	CCTNNNNNAGG	1 cut(s)	1730
BstF5I	GGATG	3 cut(s)	1609, 2229, 2277
BstKTI	GATC	6 cut(s)	336, 1099, 1285, 1354, 1404, 1484
BstMAI	GTCTC	5 cut(s)	559, 669, 931, 2079, 2294
BstMBI	GATC	6 cut(s)	333, 1096, 1282, 1351, 1401, 1481
BstMCI	CGRYCG	1 cut(s)	1484
BstNI	CCWGG	1 cut(s)	1191
BstNSI	RCATGY	4 cut(s)	1251, 1421, 2060, 2294
BstPI	GGTNACC	1 cut(s)	808
BstSCI	CCNGG	2 cut(s)	1013, 1189
BstSFI	CTRYAG	2 cut(s)	447, 1128
BstSLI	GKGCMC	2 cut(s)	88, 1934
BstV1I	GCAGC	8 cut(s)	152, 310, 688, 982, 1114, 1239, 1894, 1994
BstV2I	GAAGAC	1 cut(s)	767
BsuRI	GGCC	5 cut(s)	150, 176, 728, 1323, 1389
BtgI	CCRYGG	1 cut(s)	177
BtsCI	GGATG	3 cut(s)	1609, 2229, 2277
BtsI	GCAGTG	1 cut(s)	132
BtsIMutI	CAGTG	8 cut(s)	88, 132, 321, 678, 1267, 1655, 1945, 2349
BveI	ACCTGC	1 cut(s)	1626
Cac8I	GCNNGC	3 cut(s)	1325, 2214, 2357
CaiI	CAGNNNCTG	2 cut(s)	146, 1468
Cfr13I	GGNCC	6 cut(s)	59, 174, 315, 829, 940, 1305
CseI	GACGC	1 cut(s)	1480
Csp6I	GTAC	3 cut(s)	775, 2161, 2340
CviQI	GTAC	3 cut(s)	775, 2161, 2340
DdeI	CTNAG	6 cut(s)	324, 520, 707, 1422, 1461, 2153
DpnI	GATC	6 cut(s)	335, 1098, 1284, 1353, 1403, 1483
DpnII	GATC	6 cut(s)	333, 1096, 1282, 1351, 1401, 1481
Eam1104I	CTCTTC	4 cut(s)	798, 1493, 1656, 2010
EarI	CTCTTC	4 cut(s)	798, 1493, 1656, 2010
EciI	GGCGGA	1 cut(s)	107
Ecl136II	GAGCTC	1 cut(s)	2284
Eco130I	CCWWGG	5 cut(s)	151, 723, 729, 813, 1437
Eco147I	AGGCCT	2 cut(s)	1323, 1389
Eco24I	GRGCYC	2 cut(s)	1013, 2286
Eco31I	GGTCTC	2 cut(s)	931, 2294
Eco32I	GATATC	1 cut(s)	1588
Eco47I	GGWCC	5 cut(s)	59, 315, 829, 940, 1305
Eco53kI	GAGCTC	1 cut(s)	2284
Eco57I	CTGAAG	4 cut(s)	30, 578, 594, 1496
Eco72I	CACGTG	1 cut(s)	1349
Eco91I	GGTNACC	1 cut(s)	808
EcoICRI	GAGCTC	1 cut(s)	2284
EcoNI	CCTNNNNNAGG	1 cut(s)	1730
EcoO65I	GGTNACC	1 cut(s)	808
EcoRI	GAATTC	1 cut(s)	1185
EcoRII	CCWGG	1 cut(s)	1189
EcoRV	GATATC	1 cut(s)	1588
EcoT14I	CCWWGG	5 cut(s)	151, 723, 729, 813, 1437
EcoT38I	GRGCYC	2 cut(s)	1013, 2286
ErhI	CCWWGG	5 cut(s)	151, 723, 729, 813, 1437
FaqI	GGGAC	2 cut(s)	274, 512
FauNDI	CATATG	1 cut(s)	541
FbaI	TGATCA	1 cut(s)	1282
FblI	GTMKAC	1 cut(s)	439
Fnu4HI	GCNGC	8 cut(s)	141, 299, 702, 971, 1128, 1228, 1908, 1983
FokI	GGATG	3 cut(s)	1596, 2236, 2284
FriOI	GRGCYC	2 cut(s)	1013, 2286
Fsp4HI	GCNGC	8 cut(s)	141, 299, 702, 971, 1128, 1228, 1908, 1983
GluI	GCNGC	8 cut(s)	141, 299, 702, 971, 1128, 1228, 1908, 1983
GsaI	CCCAGC	3 cut(s)	333, 1155, 1791
GsuI	CTGGAG	1 cut(s)	2130
HaeIII	GGCC	5 cut(s)	150, 176, 728, 1323, 1389
HapII	CCGG	2 cut(s)	694, 1015
HgaI	GACGC	1 cut(s)	1480
HincII	GTYRAC	1 cut(s)	2406
HindII	GTYRAC	1 cut(s)	2406
HindIII	AAGCTT	2 cut(s)	738, 2320
HinfI	GANTC	5 cut(s)	262, 1202, 1883, 2084, 2149
HpaI	GTTAAC	1 cut(s)	2406
HpaII	CCGG	2 cut(s)	694, 1015
HphI	GGTGA	7 cut(s)	229, 671, 793, 820, 986, 1507, 1613
Hpy166II	GTNNAC	7 cut(s)	86, 440, 794, 1305, 1861, 1932, 2406
Hpy8I	GTNNAC	7 cut(s)	86, 440, 794, 1305, 1861, 1932, 2406
HpyAV	CCTTC	5 cut(s)	251, 545, 849, 1318, 1736
HpyCH4IV	ACGT	3 cut(s)	486, 1348, 2159
HpyF3I	CTNAG	6 cut(s)	324, 520, 707, 1422, 1461, 2153
HpySE526I	ACGT	3 cut(s)	486, 1348, 2159
Ksp22I	TGATCA	1 cut(s)	1282
KspAI	GTTAAC	1 cut(s)	2406
Kzo9I	GATC	6 cut(s)	333, 1096, 1282, 1351, 1401, 1481
LguI	GCTCTTC	1 cut(s)	2010
LmnI	GCTCC	6 cut(s)	279, 381, 980, 1224, 2056, 2281
Lsp1109I	GCAGC	8 cut(s)	152, 310, 688, 982, 1114, 1239, 1894, 1994
LweI	GCATC	5 cut(s)	310, 393, 859, 1618, 1908
MaeII	ACGT	3 cut(s)	486, 1348, 2159
MaeIII	GTNAC	5 cut(s)	808, 1289, 1450, 1759, 2113
MalI	GATC	6 cut(s)	335, 1098, 1284, 1353, 1403, 1483
MboI	GATC	6 cut(s)	333, 1096, 1282, 1351, 1401, 1481
MfeI	CAATTG	1 cut(s)	1490
MhlI	GDGCHC	7 cut(s)	88, 132, 1013, 1704, 1934, 2022, 2286
MlyI	GAGTC	1 cut(s)	256
MmeI	TCCRAC	3 cut(s)	807, 2023, 2295
MroXI	GAANNNNTTC	1 cut(s)	361
MseI	TTAA	5 cut(s)	65, 456, 1998, 2178, 2405
MslI	CAYNNNNRTG	1 cut(s)	654
MspCI	CTTAAG	1 cut(s)	1997
MspI	CCGG	2 cut(s)	694, 1015
MspR9I	CCNGG	2 cut(s)	1015, 1191
MunI	CAATTG	1 cut(s)	1490
MvaI	CCWGG	1 cut(s)	1191
NciI	CCSGG	1 cut(s)	1015
NdeI	CATATG	1 cut(s)	541
NdeII	GATC	6 cut(s)	333, 1096, 1282, 1351, 1401, 1481
NheI	GCTAGC	1 cut(s)	2212
NlaIV	GGNNCC	2 cut(s)	281, 692
NmeAIII	GCCGAG	1 cut(s)	2335
NmuCI	GTSAC	2 cut(s)	808, 1759
NspI	RCATGY	4 cut(s)	1251, 1421, 2060, 2294
PceI	AGGCCT	2 cut(s)	1323, 1389
PciI	ACATGT	2 cut(s)	2056, 2290
PciSI	GCTCTTC	1 cut(s)	2010
PcsI	WCGNNNNNNNCGW	1 cut(s)	2142
PdmI	GAANNNNTTC	1 cut(s)	361
PfeI	GAWTC	4 cut(s)	1202, 1883, 2084, 2149
PkrI	GCNGC	8 cut(s)	142, 300, 703, 972, 1129, 1229, 1909, 1984
Ple19I	CGATCG	1 cut(s)	1484
PleI	GAGTC	1 cut(s)	256
PmaCI	CACGTG	1 cut(s)	1349
PmlI	CACGTG	1 cut(s)	1349
PpsI	GAGTC	1 cut(s)	256
Ppu21I	YACGTR	1 cut(s)	1349
PscI	ACATGT	2 cut(s)	2056, 2290
PshBI	ATTAAT	1 cut(s)	456
Psp124BI	GAGCTC	1 cut(s)	2286
Psp1406I	AACGTT	1 cut(s)	486
Psp6I	CCWGG	1 cut(s)	1189
PspCI	CACGTG	1 cut(s)	1349
PspEI	GGTNACC	1 cut(s)	808
PspFI	CCCAGC	3 cut(s)	329, 1151, 1787
PspGI	CCWGG	1 cut(s)	1189
PspN4I	GGNNCC	2 cut(s)	281, 692
PspPI	GGNCC	6 cut(s)	59, 174, 315, 829, 940, 1305
PstI	CTGCAG	2 cut(s)	451, 1132
PstNI	CAGNNNCTG	2 cut(s)	146, 1468
PvuI	CGATCG	1 cut(s)	1484
RsaI	GTAC	3 cut(s)	776, 2162, 2341
RsaNI	GTAC	3 cut(s)	775, 2161, 2340
RseI	CAYNNNNRTG	1 cut(s)	654
SacI	GAGCTC	1 cut(s)	2286
SapI	GCTCTTC	1 cut(s)	2010
SaqAI	TTAA	5 cut(s)	65, 456, 1998, 2178, 2405
SatI	GCNGC	8 cut(s)	141, 299, 702, 971, 1128, 1228, 1908, 1983
Sau3AI	GATC	6 cut(s)	333, 1096, 1282, 1351, 1401, 1481
Sau96I	GGNCC	6 cut(s)	59, 174, 315, 829, 940, 1305
SchI	GAGTC	1 cut(s)	256
ScrFI	CCNGG	2 cut(s)	1015, 1191
SduI	GDGCHC	7 cut(s)	88, 132, 1013, 1704, 1934, 2022, 2286
SfaNI	GCATC	5 cut(s)	310, 393, 859, 1618, 1908
SfcI	CTRYAG	2 cut(s)	447, 1128
SinI	GGWCC	5 cut(s)	59, 315, 829, 940, 1305
SmiMI	CAYNNNNRTG	1 cut(s)	654
SmlI	CTYRAG	6 cut(s)	290, 472, 1237, 1703, 1964, 1997
SmoI	CTYRAG	6 cut(s)	290, 472, 1237, 1703, 1964, 1997
SpeI	ACTAGT	2 cut(s)	17, 1781
SseBI	AGGCCT	2 cut(s)	1323, 1389
SsiI	CCGC	3 cut(s)	118, 195, 1540
SspI	AATATT	2 cut(s)	1534, 2248
SstI	GAGCTC	1 cut(s)	2286
StuI	AGGCCT	2 cut(s)	1323, 1389
StyD4I	CCNGG	2 cut(s)	1013, 1189
StyI	CCWWGG	5 cut(s)	151, 723, 729, 813, 1437
TaiI	ACGT	3 cut(s)	489, 1351, 2162
TaqI	TCGA	8 cut(s)	24, 132, 346, 365, 848, 1077, 2145, 2286
TatI	WGTACW	1 cut(s)	774
TfiI	GAWTC	4 cut(s)	1202, 1883, 2084, 2149
Tru1I	TTAA	5 cut(s)	65, 456, 1998, 2178, 2405
Tru9I	TTAA	5 cut(s)	65, 456, 1998, 2178, 2405
TscAI	CASTG	8 cut(s)	88, 132, 328, 685, 1267, 1662, 1945, 2349
TseFI	GTSAC	2 cut(s)	808, 1759
TseI	GCWGC	8 cut(s)	140, 298, 701, 970, 1127, 1227, 1907, 1982
Tsp45I	GTSAC	2 cut(s)	808, 1759
TspDTI	ATGAA	9 cut(s)	157, 223, 361, 477, 650, 1119, 1200, 1269, 2243
TspRI	CASTG	8 cut(s)	88, 132, 328, 685, 1267, 1662, 1945, 2349
Vha464I	CTTAAG	1 cut(s)	1997
VneI	GTGCAC	2 cut(s)	84, 1930
VpaK11BI	GGWCC	5 cut(s)	59, 315, 829, 940, 1305
VspI	ATTAAT	1 cut(s)	456
XagI	CCTNNNNNAGG	1 cut(s)	1730
XapI	RAATTY	6 cut(s)	217, 955, 987, 1051, 1185, 2255
XceI	RCATGY	4 cut(s)	1251, 1421, 2060, 2294
XcmI	CCANNNNNNNNNTGG	2 cut(s)	546, 2311
XmiI	GTMKAC	1 cut(s)	439
XmnI	GAANNNNTTC	1 cut(s)	361

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.