Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0003020

Physical Location & Seq

Genomic Coordinates Reverse (-)

21765892 .. 21769066

Gene Structure 3175 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000007838

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2520 bp

ATGGTTCTGCATAATTCTGCAGAAGGCGAAGAAGGAAGCATTCGGCTGCAGATTTCTGACCTTCAGAGGCTGAGTGAGACCGACAGTGTAGGCAACACAATGTTTCAGCCACAAACTAGTATTGAGAAGAAAGAGAGCAACACTTCAGCTTCTGTTGGTCCATTAACAAAGCCAACAGTTCGTGCACCCGAAAAGAAGCTGACCCTTTTCGCTCTCCGCCTAGCAGTGCTCGAAAAAGCAGCAACCGGCCTTGGAACTCTCGGTTTCATCTGGGCCACGGTTGTTCTTCTTGGCGGTTTTGCTATTACTTTGGATAAAACAGACTTCTGGTTCATCACCATCATTTTGTTGATTGAAGGGACTCGGATTTTCAGCAGGAGCCATGAGCTTGAGTGGCAGCATCAAGCCACATGGTCCATCACTGATGCTGGGATCAACAGCTTTCGAGCATTGAAAATGAGCTCGAGCTTCATATTTGGGAGCATCAAGGCTTTTTTCAAGCCTGTTCTTCCAGTCAGGAAGCAAAGTCAACCCAGTGGACAGACTGCAGGGACTAATGATGCAAGAAACTTGAGAGGTTTCAATGTTCAAGGAAAGACTACTCGGACTTGGACAAGCTCAGAAGTCCCTCTCCTTCCATATGCTCAATGGGTTTTTCGGGCGAGACACATCAGCAAATTGCTCTATTGGCTTCAGCTTTTATCAGCTTCAGCTTGTATTGCTCTCTCATTGATGAAGCTCATAAAGCACAACTATGGTAATGTGGAGAAAGGAGACACTGACAAGAGGAACCGGCAAGCTGCTCTGAGTGTTTTCTATTCCTTGGCCTTGGCAGAAGCTACGCTGTTTCTGATGGAGAAGACTTACTGTGAGTACAAGGTGAGCTACTGTAAACTTTTGGAAGAGGTGAACAAGGAGTGTGAGTTAGGCCCTTCAGGTTTGGTTTCGATTAGAAGGTTTTTCTATGATGCCTATTCAAAATGTGTCAATGGAAGCATTTTTGATGGCTTGAAGATGGATATGGTCTCTTTTGGCATGGACCTATTGGGTTCAAATTCCACAGATGAGCAGCTTATTGGAGCTAAAATTCTTCGCCAATTCTCTATGAGCCCCCGGTATTCAGATGACACCTTACAGAAGATAGGGATAAATTTATCAGTTATAGAAAGATTGGTTGAGATACTGAATTGGACTGATCCAGATGAAGAAGTGATTAGAAGATCGGCTGCAGAAATACTGTCAAAACTGGCTGGCAAGAAGCAGAACTCTATTCGAGTAGCTGGAATTCCTGGTGCAATGGAATCAATTTCATCTCTGCTCCAAAGCAGCAGAAGCTCAAGTGGTGCATGTGATGAAATCAGTGAGAAGAAAACTCTTTCTGATCATGCTGACTATGGTTTGTCGACATTCAATCATTTAGGCCTGCTAATTTTGAAGAAACTTGCACGTGATCACGATAACTGTGGCAAGATTGGAAACACAAGAGGCCTCCTGCCAAAGATCATAGACTTCACACATGCTGAGGAGGTGTTGCTCAAGGCAGAAAATGTTATACCAACTCAGCTACTGACGCTGAAGCGATCGTTGCAATTGGTGAAGAGGCTTGTAAGCACAACAGGCAACACAGGAAATATTCTCCGGAGAGAGATTTCAGAGATAGTTTTCACAATCAGCAATATCAGAGATATCTTGAGGCATGGTGAGAAGCATCCAAACCTGCAATTATTGGGTATTGAAATCTTATCTAGTCTAGCACTGGAAGAGGAAGCAACAGAGATAATAGGAGGAACAGGTGGAGTGCTCAAGGAGTTGTTCAACATTTTCCTTCAAAAGGAAAGGGAAAGGGAGGAAATTGTGGTCACTAATAGAGAGGTAATAACTAGAGCTGGGGAAGCTCTAGCAATGCTGGTATTAGAAAGCAGGAACAACTGTCATCGTATCTTGAAGTTGTGTGTAGTGGATAGCCTTGTTGTAGCTCTTGATTTTCCATTGATTCTCATCAATGCTGCTAGAGTTTTGAGGAACTTGTGCGCATACAGTGGCAAAAACTGTTTCAACCAGCTCAAGGGAATTGCAAATGCAGCACCTACAGTGCTCAAGGAAATCATGTCAGAAGAGCACAAACTAAAGGAAGTAATGGTTGGCCTAGCTCCACATGTTCTGTCATTCTTGTCTCCTGAAGAATCAAGCCTCATGTTTGAGAGAGCTGGAGTTACAGAGGCAGAAGTAGCTTATGAATTAGTCGAGATTCTGAGGAAGTACAGACACCCACGAATTAAAGTTCCAAGAATAAGGAGGTTTGCCATAGAGCTGGCTATTTGGATGATGAAAGACAAACCTTCAAATATTCAAATATTCAAGGAATTGGGGATGGAAAAGGAGCTCGAACATGTGCTAGAGACCACAGCCGAGTTGGAAAGCTTCAACATTTTCTCTGGTACTGTGGGAATGAGCAGGCACAATACTACAATTCACTCATTGGTAGAAATTGCTTTAGAGTTGTTAACTGATGATGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

840

Amino Acids

93.73

Weight (kDa)

7.6

Isoelectric Point (pI)

46.57

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003020)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G06210 AT3G06210 AT5G18980 AT5G18980 AT5G18980
fragaria_vesca	FvH4_4g14210
malus_domestica	MD12G1098300.v1.1 MD13G1180800.v1.1 MD16G1181500.v1.1
prunus_persica	Prupe.1G148900_v2.0.a1
pyrus_communis	pycom13g15600 pycom16g15230
rosa_chinensis	RchiOBHm_Chr4g0418921 RchiOBHm_Chr4g0418961 RchiOBHm_Chr4g0418981
rosa_laevigata	RLG00000007835 RLG00000007838
rosa_multiflora	Rmu_sc0000935.1_g000037 Rmu_sc0000935.1_g000062 Rmu_sc0001556.1_g000003
rosa_roxburghii	Rroxscaffold_5G00362050
rosa_rugosa	Rorug04G0155600 Rorug04G0155700
rosa_samantha	Rh4AG216900 Rh4AG217400 Rh4AG217700 Rh4BG212600 Rh4BG212700 Rh4BG213300 Rh4CG228700 Rh4CG229500 Rh4CG229600 Rh4DG215800 Rh4DG216200 Rh4DG216300
rosa_wichuraiana	Rw4G018550 Rw4G018590 Rw4G018600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	2032
Acc36I	ACCTGC	1 cut(s)	1725
AccI	GTMKAC	1 cut(s)	1403
AccIII	TCCGGA	1 cut(s)	1638
AciI	CCGC	2 cut(s)	217, 294
AclWI	GGATC	2 cut(s)	440, 1190
AcsI	RAATTY	4 cut(s)	1054, 1086, 1150, 1284
AcuI	CTGAAG	7 cut(s)	47, 129, 677, 693, 918, 1595, 2199
AcvI	CACGTG	1 cut(s)	1448
AfaI	GTAC	3 cut(s)	875, 2261, 2440
AfiI	CCNNNNNNNGG	2 cut(s)	1831, 2065
AflIII	ACRYGT	2 cut(s)	2155, 2389
AhlI	ACTAGT	1 cut(s)	116
AjnI	CCWGG	1 cut(s)	1288
AjuI	GAANNNNNNNTTGG	2 cut(s)	2124, 2156
Alw21I	GWGCWC	7 cut(s)	187, 231, 464, 1803, 2097, 2121, 2385
Alw26I	GTCTC	6 cut(s)	71, 658, 768, 1030, 2178, 2393
Alw44I	GTGCAC	1 cut(s)	183
AlwI	GGATC	2 cut(s)	440, 1190
AlwNI	CAGNNNCTG	3 cut(s)	70, 152, 1567
Ama87I	CYCGRG	1 cut(s)	463
Aor13HI	TCCGGA	1 cut(s)	1638
AoxI	GGCC	7 cut(s)	247, 273, 825, 928, 1420, 1486, 2143
ApaLI	GTGCAC	1 cut(s)	183
ApeKI	GCWGC	9 cut(s)	46, 239, 397, 800, 1069, 1226, 1326, 2006, 2081
ApoI	RAATTY	4 cut(s)	1054, 1086, 1150, 1284
AspLEI	GCGC	1 cut(s)	2033
AspS9I	GGNCC	5 cut(s)	158, 273, 414, 929, 1039
AsuC2I	CCSGG	1 cut(s)	1114
AsuHPI	GGTGA	5 cut(s)	328, 892, 919, 1606, 1712
AvaI	CYCGRG	1 cut(s)	463
AvaII	GGWCC	3 cut(s)	158, 414, 1039
BaeGI	GKGCMC	1 cut(s)	187
BanII	GRGCYC	3 cut(s)	464, 1112, 2385
BbrPI	CACGTG	1 cut(s)	1448
BbsI	GAAGAC	1 cut(s)	866
Bbv12I	GWGCWC	7 cut(s)	187, 231, 464, 1803, 2097, 2121, 2385
BbvCI	CCTCAGC	1 cut(s)	1521
BbvI	GCAGC	9 cut(s)	33, 251, 409, 787, 1081, 1213, 1338, 1993, 2093
BccI	CCATC	6 cut(s)	347, 425, 847, 998, 1009, 2365
BciT130I	CCWGG	1 cut(s)	1290
BclI	TGATCA	2 cut(s)	1381, 1450
BcnI	CCSGG	1 cut(s)	1114
BcoDI	GTCTC	6 cut(s)	71, 658, 768, 1030, 2178, 2393
BcuI	ACTAGT	1 cut(s)	116
BfaI	CTAG	9 cut(s)	117, 221, 1746, 1751, 1881, 1898, 2010, 2147, 2396
BfmI	CTRYAG	5 cut(s)	18, 47, 546, 1227, 2088
BfuAI	ACCTGC	1 cut(s)	1725
BisI	GCNGC	9 cut(s)	47, 240, 398, 801, 1070, 1227, 1327, 2007, 2082
BlsI	GCNGC	9 cut(s)	48, 241, 399, 802, 1071, 1228, 1328, 2008, 2083
Bme1390I	CCNGG	2 cut(s)	1114, 1290
Bme18I	GGWCC	3 cut(s)	158, 414, 1039
BmeT110I	CYCGRG	1 cut(s)	463
BmgT120I	GGNCC	5 cut(s)	158, 273, 414, 929, 1039
BmiI	GGNNCC	2 cut(s)	380, 791
BmrFI	CCNGG	2 cut(s)	1114, 1290
BmrI	ACTGGG	1 cut(s)	528
BmsI	GCATC	6 cut(s)	409, 415, 492, 550, 958, 1717
BmuI	ACTGGG	1 cut(s)	528
BpiI	GAAGAC	1 cut(s)	866
BpmI	CTGGAG	1 cut(s)	2229
Bpu10I	CCTNAGC	1 cut(s)	1521
BpuEI	CTTGAG	8 cut(s)	410, 592, 1321, 1520, 1711, 1787, 2048, 2081
BpuMI	CCSGG	1 cut(s)	1114
BsaAI	YACGTR	1 cut(s)	1448
BsaBI	GATNNNNATC	1 cut(s)	1997
BsaI	GGTCTC	3 cut(s)	71, 1030, 2393
BsaJI	CCNNGG	5 cut(s)	250, 276, 822, 828, 1112
BsaWI	WCCGGW	1 cut(s)	1638
BsaXI	ACNNNNNCTCC	2 cut(s)	908, 938
Bsc4I	CCNNNNNNNGG	2 cut(s)	1831, 2065
Bse118I	RCCGGY	2 cut(s)	245, 792
Bse1I	ACTGG	4 cut(s)	512, 534, 1251, 1761
Bse3DI	GCAATG	2 cut(s)	1302, 1908
Bse8I	GATNNNNATC	1 cut(s)	1997
BseAI	TCCGGA	1 cut(s)	1638
BseBI	CCWGG	1 cut(s)	1290
BseDI	CCNNGG	5 cut(s)	250, 276, 822, 828, 1112
BseGI	GGATG	3 cut(s)	1708, 2328, 2376
BseJI	GATNNNNATC	1 cut(s)	1997
BseLI	CCNNNNNNNGG	2 cut(s)	1831, 2065
BseMI	GCAATG	2 cut(s)	1302, 1908
BseMII	CTCAG	6 cut(s)	62, 633, 797, 1512, 1574, 2243
BseNI	ACTGG	4 cut(s)	512, 534, 1251, 1761
BseRI	GAGGAG	1 cut(s)	1538
BseSI	GKGCMC	1 cut(s)	187
BseXI	GCAGC	9 cut(s)	33, 251, 409, 787, 1081, 1213, 1338, 1993, 2093
BseYI	CCCAGC	2 cut(s)	428, 1886
Bsh1285I	CGRYCG	1 cut(s)	1583
BshFI	GGCC	7 cut(s)	249, 275, 827, 930, 1422, 1488, 2145
BsiEI	CGRYCG	1 cut(s)	1583
BsiHKAI	GWGCWC	7 cut(s)	187, 231, 464, 1803, 2097, 2121, 2385
BsiHKCI	CYCGRG	1 cut(s)	463
BsiSI	CCGG	4 cut(s)	246, 793, 1114, 1639
BslFI	GGGAC	3 cut(s)	373, 565, 611
BslI	CCNNNNNNNGG	2 cut(s)	1831, 2065
BsmAI	GTCTC	6 cut(s)	71, 658, 768, 1030, 2178, 2393
BsmFI	GGGAC	3 cut(s)	373, 565, 611
BsmI	GAATGC	1 cut(s)	39
BsnI	GGCC	7 cut(s)	249, 275, 827, 930, 1422, 1488, 2145
Bso31I	GGTCTC	3 cut(s)	71, 1030, 2393
BsoBI	CYCGRG	1 cut(s)	463
Bsp1286I	GDGCHC	8 cut(s)	187, 231, 464, 1112, 1803, 2097, 2121, 2385
Bsp13I	TCCGGA	1 cut(s)	1638
Bsp143I	GATC	7 cut(s)	432, 1195, 1220, 1381, 1450, 1500, 1580
BspACI	CCGC	2 cut(s)	217, 294
BspANI	GGCC	7 cut(s)	249, 275, 827, 930, 1422, 1488, 2145
BspCNI	CTCAG	6 cut(s)	63, 632, 798, 1513, 1573, 2244
BspEI	TCCGGA	1 cut(s)	1638
BspLI	GGNNCC	2 cut(s)	380, 791
BspMAI	CTGCAG	4 cut(s)	22, 51, 550, 1231
BspMI	ACCTGC	1 cut(s)	1725
BspPI	GGATC	2 cut(s)	440, 1190
BspQI	GCTCTTC	1 cut(s)	2109
BspTNI	GGTCTC	3 cut(s)	71, 1030, 2393
BsrDI	GCAATG	2 cut(s)	1302, 1908
BsrFI	RCCGGY	2 cut(s)	245, 792
BsrI	ACTGG	4 cut(s)	512, 534, 1251, 1761
BssAI	RCCGGY	2 cut(s)	245, 792
BssECI	CCNNGG	5 cut(s)	250, 276, 822, 828, 1112
BssMI	GATC	7 cut(s)	432, 1195, 1220, 1381, 1450, 1500, 1580
BssT1I	CCWWGG	3 cut(s)	250, 822, 828
Bst2UI	CCWGG	1 cut(s)	1290
Bst6I	CTCTTC	4 cut(s)	897, 1592, 1755, 2109
BstBAI	YACGTR	1 cut(s)	1448
BstC8I	GCNNGC	5 cut(s)	798, 1252, 1424, 2313, 2456
BstDEI	CTNAG	6 cut(s)	71, 619, 806, 1521, 1560, 2252
BstDSI	CCRYGG	1 cut(s)	276
BstENI	CCTNNNNNAGG	1 cut(s)	1829
BstF5I	GGATG	3 cut(s)	1708, 2328, 2376
BstHHI	GCGC	1 cut(s)	2033
BstKTI	GATC	7 cut(s)	435, 1198, 1223, 1384, 1453, 1503, 1583
BstMAI	GTCTC	6 cut(s)	71, 658, 768, 1030, 2178, 2393
BstMBI	GATC	7 cut(s)	432, 1195, 1220, 1381, 1450, 1500, 1580
BstMCI	CGRYCG	1 cut(s)	1583
BstNI	CCWGG	1 cut(s)	1290
BstNSI	RCATGY	4 cut(s)	1350, 1520, 2159, 2393
BstSCI	CCNGG	2 cut(s)	1112, 1288
BstSFI	CTRYAG	5 cut(s)	18, 47, 546, 1227, 2088
BstSLI	GKGCMC	1 cut(s)	187
BstV1I	GCAGC	9 cut(s)	33, 251, 409, 787, 1081, 1213, 1338, 1993, 2093
BstV2I	GAAGAC	1 cut(s)	866
BstXI	CCANNNNNNTGG	1 cut(s)	2311
BsuRI	GGCC	7 cut(s)	249, 275, 827, 930, 1422, 1488, 2145
BtgI	CCRYGG	1 cut(s)	276
BtsCI	GGATG	3 cut(s)	1708, 2328, 2376
BtsI	GCAGTG	1 cut(s)	231
BtsIMutI	CAGTG	9 cut(s)	91, 231, 420, 541, 777, 1366, 1754, 2044, 2097
BveI	ACCTGC	1 cut(s)	1725
Cac8I	GCNNGC	5 cut(s)	798, 1252, 1424, 2313, 2456
CaiI	CAGNNNCTG	3 cut(s)	70, 152, 1567
CfoI	GCGC	1 cut(s)	2033
Cfr10I	RCCGGY	2 cut(s)	245, 792
Cfr13I	GGNCC	5 cut(s)	158, 273, 414, 929, 1039
CseI	GACGC	1 cut(s)	1579
Csp6I	GTAC	3 cut(s)	874, 2260, 2439
CviQI	GTAC	3 cut(s)	874, 2260, 2439
DdeI	CTNAG	6 cut(s)	71, 619, 806, 1521, 1560, 2252
DpnI	GATC	7 cut(s)	434, 1197, 1222, 1383, 1452, 1502, 1582
DpnII	GATC	7 cut(s)	432, 1195, 1220, 1381, 1450, 1500, 1580
Eam1104I	CTCTTC	4 cut(s)	897, 1592, 1755, 2109
EarI	CTCTTC	4 cut(s)	897, 1592, 1755, 2109
EciI	GGCGGA	1 cut(s)	206
Ecl136II	GAGCTC	2 cut(s)	462, 2383
Eco130I	CCWWGG	3 cut(s)	250, 822, 828
Eco147I	AGGCCT	2 cut(s)	1422, 1488
Eco24I	GRGCYC	3 cut(s)	464, 1112, 2385
Eco31I	GGTCTC	3 cut(s)	71, 1030, 2393
Eco32I	GATATC	1 cut(s)	1687
Eco47I	GGWCC	3 cut(s)	158, 414, 1039
Eco53kI	GAGCTC	2 cut(s)	462, 2383
Eco57I	CTGAAG	7 cut(s)	47, 129, 677, 693, 918, 1595, 2199
Eco72I	CACGTG	1 cut(s)	1448
Eco88I	CYCGRG	1 cut(s)	463
EcoICRI	GAGCTC	2 cut(s)	462, 2383
EcoNI	CCTNNNNNAGG	1 cut(s)	1829
EcoO109I	RGGNCCY	1 cut(s)	929
EcoRI	GAATTC	1 cut(s)	1284
EcoRII	CCWGG	1 cut(s)	1288
EcoRV	GATATC	1 cut(s)	1687
EcoT14I	CCWWGG	3 cut(s)	250, 822, 828
EcoT38I	GRGCYC	3 cut(s)	464, 1112, 2385
ErhI	CCWWGG	3 cut(s)	250, 822, 828
FaqI	GGGAC	3 cut(s)	373, 565, 611
FauNDI	CATATG	1 cut(s)	640
FbaI	TGATCA	2 cut(s)	1381, 1450
FblI	GTMKAC	1 cut(s)	1403
Fnu4HI	GCNGC	9 cut(s)	47, 240, 398, 801, 1070, 1227, 1327, 2007, 2082
FokI	GGATG	3 cut(s)	1695, 2335, 2383
FriOI	GRGCYC	3 cut(s)	464, 1112, 2385
Fsp4HI	GCNGC	9 cut(s)	47, 240, 398, 801, 1070, 1227, 1327, 2007, 2082
FspAI	RTGCGCAY	1 cut(s)	2032
FspBI	CTAG	9 cut(s)	117, 221, 1746, 1751, 1881, 1898, 2010, 2147, 2396
FspI	TGCGCA	1 cut(s)	2032
GlaI	GCGC	1 cut(s)	2032
GluI	GCNGC	9 cut(s)	47, 240, 398, 801, 1070, 1227, 1327, 2007, 2082
GsaI	CCCAGC	2 cut(s)	432, 1890
GsuI	CTGGAG	1 cut(s)	2229
HaeIII	GGCC	7 cut(s)	249, 275, 827, 930, 1422, 1488, 2145
HapII	CCGG	4 cut(s)	246, 793, 1114, 1639
HgaI	GACGC	1 cut(s)	1579
HhaI	GCGC	1 cut(s)	2033
Hin6I	GCGC	1 cut(s)	2031
HinP1I	GCGC	1 cut(s)	2031
HincII	GTYRAC	3 cut(s)	530, 1404, 2505
HindII	GTYRAC	3 cut(s)	530, 1404, 2505
HindIII	AAGCTT	1 cut(s)	2419
HinfI	GANTC	5 cut(s)	361, 1301, 1993, 2183, 2248
HpaI	GTTAAC	1 cut(s)	2505
HpaII	CCGG	4 cut(s)	246, 793, 1114, 1639
HphI	GGTGA	5 cut(s)	328, 892, 919, 1606, 1712
Hpy166II	GTNNAC	7 cut(s)	185, 530, 539, 893, 910, 1404, 2505
Hpy188III	TCNNGA	9 cut(s)	517, 1199, 1454, 1639, 1690, 1942, 1979, 2177, 2245
Hpy8I	GTNNAC	7 cut(s)	185, 530, 539, 893, 910, 1404, 2505
HpyAV	CCTTC	9 cut(s)	17, 26, 71, 350, 644, 942, 948, 1835, 2349
HpyCH4IV	ACGT	1 cut(s)	1447
HpyF3I	CTNAG	6 cut(s)	71, 619, 806, 1521, 1560, 2252
HpySE526I	ACGT	1 cut(s)	1447
HspAI	GCGC	1 cut(s)	2031
Kpn2I	TCCGGA	1 cut(s)	1638
Ksp22I	TGATCA	2 cut(s)	1381, 1450
KspAI	GTTAAC	1 cut(s)	2505
Kzo9I	GATC	7 cut(s)	432, 1195, 1220, 1381, 1450, 1500, 1580
LguI	GCTCTTC	1 cut(s)	2109
LmnI	GCTCC	6 cut(s)	378, 480, 1079, 1323, 2155, 2380
Lsp1109I	GCAGC	9 cut(s)	33, 251, 409, 787, 1081, 1213, 1338, 1993, 2093
LweI	GCATC	6 cut(s)	409, 415, 492, 550, 958, 1717
MaeI	CTAG	9 cut(s)	117, 221, 1746, 1751, 1881, 1898, 2010, 2147, 2396
MaeII	ACGT	1 cut(s)	1447
MaeIII	GTNAC	2 cut(s)	1858, 2212
MalI	GATC	7 cut(s)	434, 1197, 1222, 1383, 1452, 1502, 1582
MboI	GATC	7 cut(s)	432, 1195, 1220, 1381, 1450, 1500, 1580
MfeI	CAATTG	1 cut(s)	1589
MhlI	GDGCHC	8 cut(s)	187, 231, 464, 1112, 1803, 2097, 2121, 2385
MlyI	GAGTC	1 cut(s)	355
MmeI	TCCRAC	1 cut(s)	2394
MroI	TCCGGA	1 cut(s)	1638
MseI	TTAA	3 cut(s)	164, 2277, 2504
MslI	CAYNNNNRTG	1 cut(s)	753
MspI	CCGG	4 cut(s)	246, 793, 1114, 1639
MspR9I	CCNGG	2 cut(s)	1114, 1290
MunI	CAATTG	1 cut(s)	1589
Mva1269I	GAATGC	1 cut(s)	39
MvaI	CCWGG	1 cut(s)	1290
NciI	CCSGG	1 cut(s)	1114
NdeI	CATATG	1 cut(s)	640
NdeII	GATC	7 cut(s)	432, 1195, 1220, 1381, 1450, 1500, 1580
NlaIV	GGNNCC	2 cut(s)	380, 791
NmeAIII	GCCGAG	1 cut(s)	2434
NmuCI	GTSAC	1 cut(s)	1858
NsbI	TGCGCA	1 cut(s)	2032
NspI	RCATGY	4 cut(s)	1350, 1520, 2159, 2393
PaeR7I	CTCGAG	1 cut(s)	463
PceI	AGGCCT	2 cut(s)	1422, 1488
PciI	ACATGT	2 cut(s)	2155, 2389
PciSI	GCTCTTC	1 cut(s)	2109
PctI	GAATGC	1 cut(s)	39
PfeI	GAWTC	4 cut(s)	1301, 1993, 2183, 2248
PkrI	GCNGC	9 cut(s)	48, 241, 399, 802, 1071, 1228, 1328, 2008, 2083
Ple19I	CGATCG	1 cut(s)	1583
PleI	GAGTC	1 cut(s)	355
PmaCI	CACGTG	1 cut(s)	1448
PmlI	CACGTG	1 cut(s)	1448
PpsI	GAGTC	1 cut(s)	355
Ppu21I	YACGTR	1 cut(s)	1448
PscI	ACATGT	2 cut(s)	2155, 2389
Psp124BI	GAGCTC	2 cut(s)	464, 2385
Psp6I	CCWGG	1 cut(s)	1288
PspCI	CACGTG	1 cut(s)	1448
PspFI	CCCAGC	2 cut(s)	428, 1886
PspGI	CCWGG	1 cut(s)	1288
PspN4I	GGNNCC	2 cut(s)	380, 791
PspPI	GGNCC	5 cut(s)	158, 273, 414, 929, 1039
PspXI	VCTCGAGB	1 cut(s)	463
PstI	CTGCAG	4 cut(s)	22, 51, 550, 1231
PstNI	CAGNNNCTG	3 cut(s)	70, 152, 1567
PvuI	CGATCG	1 cut(s)	1583
RsaI	GTAC	3 cut(s)	875, 2261, 2440
RsaNI	GTAC	3 cut(s)	874, 2260, 2439
RseI	CAYNNNNRTG	1 cut(s)	753
SacI	GAGCTC	2 cut(s)	464, 2385
SalI	GTCGAC	1 cut(s)	1402
SapI	GCTCTTC	1 cut(s)	2109
SaqAI	TTAA	3 cut(s)	164, 2277, 2504
SatI	GCNGC	9 cut(s)	47, 240, 398, 801, 1070, 1227, 1327, 2007, 2082
Sau3AI	GATC	7 cut(s)	432, 1195, 1220, 1381, 1450, 1500, 1580
Sau96I	GGNCC	5 cut(s)	158, 273, 414, 929, 1039
SchI	GAGTC	1 cut(s)	355
ScrFI	CCNGG	2 cut(s)	1114, 1290
SduI	GDGCHC	8 cut(s)	187, 231, 464, 1112, 1803, 2097, 2121, 2385
SfaNI	GCATC	6 cut(s)	409, 415, 492, 550, 958, 1717
SfcI	CTRYAG	5 cut(s)	18, 47, 546, 1227, 2088
Sfr274I	CTCGAG	1 cut(s)	463
SinI	GGWCC	3 cut(s)	158, 414, 1039
SlaI	CTCGAG	1 cut(s)	463
SmiMI	CAYNNNNRTG	1 cut(s)	753
SmlI	CTYRAG	9 cut(s)	389, 463, 571, 1336, 1535, 1690, 1802, 2063, 2096
SmoI	CTYRAG	9 cut(s)	389, 463, 571, 1336, 1535, 1690, 1802, 2063, 2096
SpeI	ACTAGT	1 cut(s)	116
SseBI	AGGCCT	2 cut(s)	1422, 1488
SsiI	CCGC	2 cut(s)	217, 294
SspI	AATATT	3 cut(s)	1633, 2347, 2355
SspMI	CTAG	9 cut(s)	117, 221, 1746, 1751, 1881, 1898, 2010, 2147, 2396
SstI	GAGCTC	2 cut(s)	464, 2385
StuI	AGGCCT	2 cut(s)	1422, 1488
StyD4I	CCNGG	2 cut(s)	1112, 1288
StyI	CCWWGG	3 cut(s)	250, 822, 828
TaiI	ACGT	1 cut(s)	1450
TaqI	TCGA	8 cut(s)	231, 445, 464, 947, 1273, 1403, 2244, 2385
TaqII	GACCGA	1 cut(s)	95
TatI	WGTACW	2 cut(s)	873, 2259
TfiI	GAWTC	4 cut(s)	1301, 1993, 2183, 2248
Tru1I	TTAA	3 cut(s)	164, 2277, 2504
Tru9I	TTAA	3 cut(s)	164, 2277, 2504
TscAI	CASTG	9 cut(s)	91, 231, 427, 541, 784, 1366, 1761, 2044, 2097
TseFI	GTSAC	1 cut(s)	1858
TseI	GCWGC	9 cut(s)	46, 239, 397, 800, 1069, 1226, 1326, 2006, 2081
Tsp45I	GTSAC	1 cut(s)	1858
TspDTI	ATGAA	9 cut(s)	256, 322, 460, 749, 1218, 1299, 1368, 2250, 2342
TspRI	CASTG	9 cut(s)	91, 231, 427, 541, 784, 1366, 1761, 2044, 2097
VneI	GTGCAC	1 cut(s)	183
VpaK11BI	GGWCC	3 cut(s)	158, 414, 1039
XagI	CCTNNNNNAGG	1 cut(s)	1829
XapI	RAATTY	4 cut(s)	1054, 1086, 1150, 1284
XceI	RCATGY	4 cut(s)	1350, 1520, 2159, 2393
XcmI	CCANNNNNNNNNTGG	2 cut(s)	645, 2410
XhoI	CTCGAG	1 cut(s)	463
XmiI	GTMKAC	1 cut(s)	1403
XspI	CTAG	9 cut(s)	117, 221, 1746, 1751, 1881, 1898, 2010, 2147, 2396

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.