FvH4_4g18250
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0002513
Physical Location & Seq
Reverse (-)
22199512 .. 22205845
6334 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g18250.t3

Sequence Viewer

Length: 2508 bp
ATGGGTGGGCAGATGCAGCAGAGCAATGCCGCCGCGGCTACTGCTCTGTATGACCACCATGCCGGCAATGCGGGTCCCACCAACGACGCCAGCGACGCCGTCATGGCCCGCTGGCTCCAGTCCGCTGGTCTCCAGCATCTGGCCTCACCTCTGGCTTCCACCGCCGTCGATAACCGGCTACTCCCTAACCTTCTCATGCAGGGTTACGGAGCGCAGTCGGCTGAAGAGAAGCAGAGGCTGTTGAAATTAATGCGGAACCTGAATTTCAACGGGGAGTCGGGTTCAGAGCCGTACACACCTACTGCCCAAACATCTGGAGGGCCTGCATCGGAGGGTTTTCACTCTCCGGACTTCAGGGGGGATTTCGGAGCTGGGCTGTTGGATCTTCATGCAATGGATGATACAGAGCTTCTTTCTGAGCATGTTATGTCCGAACCGTTTGAGCCATCTCCATTTATGCCTGGTGGTATGAAAACTTTCGAAGATGAATTGAATTTGACAAGTGGTGGACAGCAAAGTGTGCTACCTGACCAAGATGCATCAGTTCCATTAGTGCAGAATGAGAAGGAGAGCACACGGGAGAATAATGTGGCTAAAATAAAAGTTGTGGTACGCAAAAGACCTTTAAACAAGAAGGAACTTTCTCGGAAGGAGGATGACATTGTCACTGTGTATGACAAGTCTTATCTGACAGTTCATGAACCTAGAGTGAAGGTAGACTTGACTGCATATGTGGAGAAGCATGAGTTCTGTTTTGATGCGGTTCTGGATGAGCATGTTCGCAATGATGAGGTATATTGGGCCACTGTAGAACCAATTATTCCCCTCATTTTTGAGCGAACAAAGGCTACATGTTTTGCTTATGGTCAGACAGGTAGTGGCAAGACATTCACGATGCAACCGTTACCTATCAGAGCTGCTGAAGATCTTGTCAGATTGTTGCACCAGCCAGTTTACCGTAACCAGAGATTCAAATTATGGCTAAGCTACTTTGAGATCTATGGTGGAAAGCTCTTTGATCTTCTCAGCGAGAGGAAGAAACTTTGTATGAGAGAAGATGGACGGCAACAAGTTTGCATTGTTGGACTGCAAGAGTTTGAGGTGTCAGATGTACAGATTGTTAAAGAATATATTGAGAGGGGGAACGCTACTAGAAGTACTGGGTCAACTGGTGCTAATGAGGAGTCGTCTAGGTCTCATGCTATTTTACAACTTGTGGTTAAAAAGCACACTGAGGTAAAAGATTCCAGGGGCCGGATTAACATTGATGTAAATGAACCCAGAAGTGGGAAGGTTGTGGGAAAGATTTCTTTTATTGATCTTGCTGGTAGTGAAAGAGGTGCTGACACCACTGATAATGACCGACAAACAAGAATTGAAGGAGCAGAAATCAACAAGAGCCTTTTGGCCCTAAAGGAGTGCATTCGTGCTCTGGACAATGACCAGATCCATATACCTTTTCGGGGAAGCAAACTCACGGAAGTGCTTCGTGACTCTTTCGTCGGAAATTCAAGGACAGTAATGATATCTTGTATATCTCCAAATGCAGGGTCATGTGAGCATACACTGAATACTTTGAGATATGCTGATAGGGTCAAAAGTCTTTCGAAAGGTGGCAATTCTCGGAAGGATCAACCTGCAAATTCATTACCTCCAACTAATAAGGATTTTTCCTCATCATCGTCTACTCTAGCTTCTTCTGGTGTAGAGGATATCCATGAACAACGTCAAGAAGTTAAAACAACCGATACAGGTAGAAGAGTTATAGAAAAAGATAGTTTTTCATATATCCATGAGCAACGCCAAGAAGTTAAACCAACTGATACAGGCAGAAGAGCTGCAGAGAAAGAAAGTATTTCATATATCCCTACTCCTGATTTTGAGAAGCGTCCAGCAAATTCATCGAGTAATCCCATTAGTATTCGAGAAGGAAAAGGGATAACTTCTAGTTCAATAGATAGGGAGAGGTTTGAAGGGAATAATTCTTACAGTGATTCTTACAGTCAGAAGATGTCGTATCATTCTCAAAATTCAGTTGATGCAGAAGAAAAAGTGCAAAAGGTATCACCACCTCGCCGGAAACTAACTAAAGACGAAAAATCAGAAAAGTTGGGCAACTGGCTGAAGAAAGGAGGTGGTTCTGATCTGTCCACCACCAGCTCTATGCAGCAGAATTCTGGGAATTTTAACACAAGCAATGTTGGATCTAGACAGTCTGAGCCTGAAGTTCCTGATGGGAATATCAATGCAATTCTTGAGGAAGAAGAGGCCCTAATTGCTGCCCACCGAAAAGAAATCGAGGATACAATGGAAATAGTTCGTGAAGAAATGAAACTGTTGGCAGAAGTGGACCGACCAGGGAGCCTCATAGACAACTATGTGACTCAGTTGAGCTTTGTGCTTTCTCGCAAGGCAGCTAGTCTGGTGAGTCTCCAAGCGCGCCTCGCAAGGTTTCAGCATAGACTAAAAGAACAGGAGATTCTAAGTCGGAAAAGAGTACCTCGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000070 GO:0000226 GO:0000278 GO:0000280 GO:0000775 GO:0000776 GO:0000819 GO:0000902 GO:0000904 GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005694 GO:0005737 GO:0005794 GO:0005795 GO:0005856 GO:0005871 GO:0005874 GO:0005875 GO:0005886 GO:0006928 GO:0006996 GO:0007010 GO:0007017 GO:0007018 GO:0007019 GO:0007049 GO:0007059 GO:0007080 GO:0007163 GO:0008017 GO:0008092 GO:0008150 GO:0008608 GO:0009505 GO:0009531 GO:0009653 GO:0009832 GO:0009834 GO:0009888 GO:0009987 GO:0010026 GO:0010087 GO:0010089 GO:0010090 GO:0012505 GO:0015630 GO:0015631 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022402 GO:0022411 GO:0030154 GO:0030312 GO:0030951 GO:0030952 GO:0031109 GO:0031984 GO:0032502 GO:0032984 GO:0032989 GO:0032991 GO:0035371 GO:0042546 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043624 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044427 GO:0044430 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0048285 GO:0048468 GO:0048856 GO:0048869 GO:0050000 GO:0050789 GO:0050794 GO:0051010 GO:0051179 GO:0051234 GO:0051261 GO:0051276 GO:0051303 GO:0051310 GO:0051315 GO:0051640 GO:0051641 GO:0051649 GO:0051656 GO:0051983 GO:0065007 GO:0071554 GO:0071669 GO:0071840 GO:0071944 GO:0090058 GO:0090558 GO:0090626 GO:0097435 GO:0098687 GO:0098791 GO:0098813 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0140014 GO:1903047 GO:1903338 GO:1990752
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Kinesin RRM_1

Protein Analysis

836

Amino Acids

93.05

Weight (kDa)

6.1

Isoelectric Point (pI)

48.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Microtub_bd PF16796 199 - 342 8.1e-12 Microtubule binding
Kinesin PF00225 205 - 534 1.1e-95 Kinesin motor domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1499
Acc36I ACCTGC 1 cut(s) 1645
AccB7I CCANNNNNTGG 1 cut(s) 139
AccI GTMKAC 2 cut(s) 717, 1685
AccII CGCG 2 cut(s) 35, 2440
AccIII TCCGGA 1 cut(s) 346
AciI CCGC 9 cut(s) 30, 33, 35, 71, 109, 123, 162, 253, 761
AclWI GGATC 4 cut(s) 390, 1441, 1638, 2212
AcsI RAATTY 8 cut(s) 262, 493, 1507, 1642, 1897, 2029, 2173, 2182
AcuI CTGAAG 5 cut(s) 243, 337, 942, 2144, 2244
AcyI GRCGYC 2 cut(s) 87, 96
AfaI GTAC 5 cut(s) 293, 612, 1113, 1159, 2499
AfiI CCNNNNNNNGG 6 cut(s) 139, 1254, 1286, 1287, 1463, 1547
AflIII ACRYGT 1 cut(s) 851
AgsI TTSAA 8 cut(s) 244, 268, 493, 973, 1379, 1512, 1953, 1973
AjnI CCWGG 3 cut(s) 460, 1247, 2356
AleI CACNNNNGTG 1 cut(s) 1481
Alw21I GWGCWC 2 cut(s) 575, 1432
Alw26I GTCTC 3 cut(s) 134, 1200, 2435
AlwI GGATC 4 cut(s) 390, 1441, 1638, 2212
AlwNI CAGNNNCTG 2 cut(s) 139, 238
Aor13HI TCCGGA 1 cut(s) 346
AoxI GGCC 7 cut(s) 105, 141, 320, 801, 1252, 1407, 2268
ApeKI GCWGC 6 cut(s) 16, 917, 1838, 2167, 2279, 2414
ApoI RAATTY 8 cut(s) 262, 493, 1507, 1642, 1897, 2029, 2173, 2182
ArsI GACNNNNNNTTYG 2 cut(s) 1535, 1567
AseI ATTAAT 1 cut(s) 248
Asp700I GAANNNNTTC 4 cut(s) 476, 1306, 1485, 2316
AspLEI GCGC 3 cut(s) 214, 2440, 2442
AspS9I GGNCC 8 cut(s) 74, 106, 320, 801, 1252, 1408, 2269, 2350
AsuHPI GGTGA 3 cut(s) 138, 2058, 2437
AsuII TTCGAA 2 cut(s) 480, 1607
AvaII GGWCC 2 cut(s) 74, 2350
Bbv12I GWGCWC 2 cut(s) 575, 1432
BbvI GCAGC 6 cut(s) 28, 904, 1825, 2179, 2266, 2426
BccI CCATC 3 cut(s) 454, 1052, 2228
BceAI ACGGC 4 cut(s) 83, 149, 274, 1079
BcgI CGANNNNNNTGC 2 cut(s) 1884, 1918
BciT130I CCWGG 3 cut(s) 462, 1249, 2358
BciVI GTATCC 1 cut(s) 2296
BcoDI GTCTC 3 cut(s) 134, 1200, 2435
BfaI CTAG 7 cut(s) 705, 1152, 1191, 1691, 1947, 2208, 2418
BfmI CTRYAG 2 cut(s) 807, 1839
BfuAI ACCTGC 1 cut(s) 1645
BfuI GTATCC 1 cut(s) 2296
BglI GCCNNNNNGGC 2 cut(s) 35, 104
BglII AGATCT 2 cut(s) 925, 996
BisI GCNGC 9 cut(s) 17, 30, 33, 36, 918, 1839, 2168, 2280, 2415
BlpI GCTNAGC 1 cut(s) 983
BlsI GCNGC 9 cut(s) 18, 31, 34, 37, 919, 1840, 2169, 2281, 2416
BmcAI AGTACT 1 cut(s) 1159
Bme1390I CCNGG 3 cut(s) 462, 1249, 2358
Bme18I GGWCC 2 cut(s) 74, 2350
BmgT120I GGNCC 8 cut(s) 74, 106, 320, 801, 1252, 1408, 2269, 2350
BmiI GGNNCC 6 cut(s) 75, 76, 116, 257, 1253, 2363
BmrFI CCNGG 3 cut(s) 462, 1249, 2358
BmrI ACTGGG 1 cut(s) 1170
BmsI GCATC 8 cut(s) 3, 145, 335, 526, 548, 748, 885, 2029
BmuI ACTGGG 1 cut(s) 1170
BpmI CTGGAG 3 cut(s) 101, 116, 336
Bpu1102I GCTNAGC 1 cut(s) 983
Bpu14I TTCGAA 2 cut(s) 480, 1607
BpuEI CTTGAG 1 cut(s) 2276
BsaHI GRCGYC 2 cut(s) 87, 96
BsaI GGTCTC 2 cut(s) 134, 1200
BsaJI CCNNGG 3 cut(s) 33, 1248, 2357
BsaWI WCCGGW 1 cut(s) 346
Bsc4I CCNNNNNNNGG 6 cut(s) 139, 1254, 1286, 1287, 1463, 1547
Bse118I RCCGGY 2 cut(s) 62, 174
Bse1I ACTGG 5 cut(s) 118, 950, 1165, 1174, 2123
Bse3DI GCAATG 5 cut(s) 31, 73, 399, 790, 2203
BseAI TCCGGA 1 cut(s) 346
BseBI CCWGG 3 cut(s) 462, 1249, 2358
BseDI CCNNGG 3 cut(s) 33, 1248, 2357
BseGI GGATG 3 cut(s) 403, 661, 775
BseLI CCNNNNNNNGG 6 cut(s) 139, 1254, 1286, 1287, 1463, 1547
BseMI GCAATG 5 cut(s) 31, 73, 399, 790, 2203
BseMII CTCAG 5 cut(s) 408, 1039, 1224, 2208, 2399
BseNI ACTGG 5 cut(s) 118, 950, 1165, 1174, 2123
BsePI GCGCGC 1 cut(s) 2438
BseRI GAGGAG 1 cut(s) 1196
BseXI GCAGC 6 cut(s) 28, 904, 1825, 2179, 2266, 2426
BseYI CCCAGC 1 cut(s) 371
BsgI GTGCAG 1 cut(s) 575
Bsh1236I CGCG 2 cut(s) 35, 2440
BshFI GGCC 7 cut(s) 107, 143, 322, 803, 1254, 1409, 2270
BsiHKAI GWGCWC 2 cut(s) 575, 1432
BsiSI CCGG 5 cut(s) 63, 175, 347, 1255, 2077
BslFI GGGAC 1 cut(s) 60
BslI CCNNNNNNNGG 6 cut(s) 139, 1254, 1286, 1287, 1463, 1547
BsmAI GTCTC 3 cut(s) 134, 1200, 2435
BsmFI GGGAC 1 cut(s) 60
BsmI GAATGC 1 cut(s) 1422
BsnI GGCC 7 cut(s) 107, 143, 322, 803, 1254, 1409, 2270
Bso31I GGTCTC 2 cut(s) 134, 1200
Bsp119I TTCGAA 2 cut(s) 480, 1607
Bsp1286I GDGCHC 2 cut(s) 575, 1432
Bsp13I TCCGGA 1 cut(s) 346
Bsp1407I TGTACA 1 cut(s) 1111
Bsp143I GATC 9 cut(s) 382, 925, 996, 1018, 1318, 1446, 1630, 2143, 2204
Bsp1720I GCTNAGC 1 cut(s) 983
BspACI CCGC 9 cut(s) 30, 33, 35, 71, 109, 123, 162, 253, 761
BspANI GGCC 7 cut(s) 107, 143, 322, 803, 1254, 1409, 2270
BspCNI CTCAG 5 cut(s) 409, 1038, 1225, 2209, 2398
BspEI TCCGGA 1 cut(s) 346
BspFNI CGCG 2 cut(s) 35, 2440
BspHI TCATGA 1 cut(s) 697
BspLI GGNNCC 6 cut(s) 75, 76, 116, 257, 1253, 2363
BspMAI CTGCAG 1 cut(s) 1843
BspMI ACCTGC 1 cut(s) 1645
BspPI GGATC 4 cut(s) 390, 1441, 1638, 2212
BspQI GCTCTTC 1 cut(s) 1828
BspT104I TTCGAA 2 cut(s) 480, 1607
BspTNI GGTCTC 2 cut(s) 134, 1200
BsrDI GCAATG 5 cut(s) 31, 73, 399, 790, 2203
BsrFI RCCGGY 2 cut(s) 62, 174
BsrGI TGTACA 1 cut(s) 1111
BsrI ACTGG 5 cut(s) 118, 950, 1165, 1174, 2123
BssAI RCCGGY 2 cut(s) 62, 174
BssECI CCNNGG 3 cut(s) 33, 1248, 2357
BssHII GCGCGC 1 cut(s) 2438
BssMI GATC 9 cut(s) 382, 925, 996, 1018, 1318, 1446, 1630, 2143, 2204
BssNI GRCGYC 2 cut(s) 87, 96
Bst2UI CCWGG 3 cut(s) 462, 1249, 2358
Bst6I CTCTTC 4 cut(s) 219, 1753, 1828, 2259
BstACI GRCGYC 2 cut(s) 87, 96
BstAPI GCANNNNNTGC 1 cut(s) 520
BstAUI TGTACA 1 cut(s) 1111
BstBI TTCGAA 2 cut(s) 480, 1607
BstC8I GCNNGC 6 cut(s) 64, 91, 109, 113, 324, 2440
BstDEI CTNAG 7 cut(s) 417, 983, 1025, 1233, 2217, 2385, 2483
BstDSI CCRYGG 1 cut(s) 33
BstF5I GGATG 3 cut(s) 403, 661, 775
BstFNI CGCG 2 cut(s) 35, 2440
BstHHI GCGC 3 cut(s) 214, 2440, 2442
BstKTI GATC 9 cut(s) 385, 928, 999, 1021, 1321, 1449, 1633, 2146, 2207
BstMAI GTCTC 3 cut(s) 134, 1200, 2435
BstMBI GATC 9 cut(s) 382, 925, 996, 1018, 1318, 1446, 1630, 2143, 2204
BstNI CCWGG 3 cut(s) 462, 1249, 2358
BstNSI RCATGY 3 cut(s) 425, 779, 855
BstSCI CCNGG 3 cut(s) 460, 1247, 2356
BstSFI CTRYAG 2 cut(s) 807, 1839
BstUI CGCG 2 cut(s) 35, 2440
BstV1I GCAGC 6 cut(s) 28, 904, 1825, 2179, 2266, 2426
BstX2I RGATCY 5 cut(s) 382, 925, 996, 1446, 2204
BstXI CCANNNNNNTGG 2 cut(s) 125, 314
BstYI RGATCY 5 cut(s) 382, 925, 996, 1446, 2204
BsuI GTATCC 1 cut(s) 2296
BsuRI GGCC 7 cut(s) 107, 143, 322, 803, 1254, 1409, 2270
BtgI CCRYGG 1 cut(s) 33
BtsCI GGATG 3 cut(s) 403, 661, 775
BtsIMutI CAGTG 6 cut(s) 666, 804, 1230, 1350, 1565, 1996
BveI ACCTGC 1 cut(s) 1645
Cac8I GCNNGC 6 cut(s) 64, 91, 109, 113, 324, 2440
CaiI CAGNNNCTG 2 cut(s) 139, 238
CciI TCATGA 1 cut(s) 697
CfoI GCGC 3 cut(s) 214, 2440, 2442
Cfr10I RCCGGY 2 cut(s) 62, 174
Cfr13I GGNCC 8 cut(s) 74, 106, 320, 801, 1252, 1408, 2269, 2350
Cfr42I CCGCGG 1 cut(s) 36
CseI GACGC 3 cut(s) 95, 104, 1877
Csp6I GTAC 5 cut(s) 292, 611, 1112, 1158, 2498
CviQI GTAC 5 cut(s) 292, 611, 1112, 1158, 2498
DdeI CTNAG 7 cut(s) 417, 983, 1025, 1233, 2217, 2385, 2483
DpnI GATC 9 cut(s) 384, 927, 998, 1020, 1320, 1448, 1632, 2145, 2206
DpnII GATC 9 cut(s) 382, 925, 996, 1018, 1318, 1446, 1630, 2143, 2204
DraI TTTAAA 1 cut(s) 627
DrdI GACNNNNNNGTC 1 cut(s) 1499
DseDI GACNNNNNNGTC 1 cut(s) 1499
Eam1104I CTCTTC 4 cut(s) 219, 1753, 1828, 2259
EarI CTCTTC 4 cut(s) 219, 1753, 1828, 2259
Eco31I GGTCTC 2 cut(s) 134, 1200
Eco32I GATATC 2 cut(s) 1527, 1714
Eco47I GGWCC 2 cut(s) 74, 2350
Eco57I CTGAAG 5 cut(s) 243, 337, 942, 2144, 2244
EcoO109I RGGNCCY 3 cut(s) 74, 320, 2269
EcoRI GAATTC 1 cut(s) 2173
EcoRII CCWGG 3 cut(s) 460, 1247, 2356
EcoRV GATATC 2 cut(s) 1527, 1714
EcoT22I ATGCAT 1 cut(s) 541
FalI AAGNNNNNCTT 2 cut(s) 704, 736
FaqI GGGAC 1 cut(s) 60
FauI CCCGC 2 cut(s) 64, 116
FauNDI CATATG 1 cut(s) 730
FblI GTMKAC 2 cut(s) 717, 1685
Fnu4HI GCNGC 9 cut(s) 17, 30, 33, 36, 918, 1839, 2168, 2280, 2415
FokI GGATG 3 cut(s) 410, 668, 782
Fsp4HI GCNGC 9 cut(s) 17, 30, 33, 36, 918, 1839, 2168, 2280, 2415
FspBI CTAG 7 cut(s) 705, 1152, 1191, 1691, 1947, 2208, 2418
GlaI GCGC 3 cut(s) 213, 2439, 2441
GluI GCNGC 9 cut(s) 17, 30, 33, 36, 918, 1839, 2168, 2280, 2415
GsaI CCCAGC 1 cut(s) 375
GsuI CTGGAG 3 cut(s) 101, 116, 336
HaeIII GGCC 7 cut(s) 107, 143, 322, 803, 1254, 1409, 2270
HapII CCGG 5 cut(s) 63, 175, 347, 1255, 2077
HgaI GACGC 3 cut(s) 95, 104, 1877
HhaI GCGC 3 cut(s) 214, 2440, 2442
Hin1I GRCGYC 2 cut(s) 87, 96
Hin6I GCGC 3 cut(s) 212, 2438, 2440
HinP1I GCGC 3 cut(s) 212, 2438, 2440
HincII GTYRAC 1 cut(s) 1167
HindII GTYRAC 1 cut(s) 1167
HinfI GANTC 9 cut(s) 275, 969, 1184, 1244, 1493, 1994, 2383, 2428, 2479
HpaII CCGG 5 cut(s) 63, 175, 347, 1255, 2077
HphI GGTGA 3 cut(s) 138, 2058, 2437
Hpy166II GTNNAC 8 cut(s) 294, 509, 718, 955, 1167, 1686, 2151, 2350
Hpy8I GTNNAC 8 cut(s) 294, 509, 718, 955, 1167, 1686, 2151, 2350
Hpy99I CGWCG 4 cut(s) 89, 98, 170, 1505
HpyCH4IV ACGT 1 cut(s) 1726
HpyF3I CTNAG 7 cut(s) 417, 983, 1025, 1233, 2217, 2385, 2483
HpySE526I ACGT 1 cut(s) 1726
Hsp92I GRCGYC 2 cut(s) 87, 96
HspAI GCGC 3 cut(s) 212, 2438, 2440
KflI GGGWCCC 1 cut(s) 74
Kpn2I TCCGGA 1 cut(s) 346
KroI GCCGGC 1 cut(s) 62
KroNI GCCGGC 1 cut(s) 64
KspI CCGCGG 1 cut(s) 36
Kzo9I GATC 9 cut(s) 382, 925, 996, 1018, 1318, 1446, 1630, 2143, 2204
LguI GCTCTTC 1 cut(s) 1828
LmnI GCTCC 5 cut(s) 120, 209, 368, 1382, 2361
Lsp1109I GCAGC 6 cut(s) 28, 904, 1825, 2179, 2266, 2426
LweI GCATC 8 cut(s) 3, 145, 335, 526, 548, 748, 885, 2029
MaeI CTAG 7 cut(s) 705, 1152, 1191, 1691, 1947, 2208, 2418
MaeII ACGT 1 cut(s) 1726
MaeIII GTNAC 6 cut(s) 203, 664, 903, 959, 1490, 2380
MalI GATC 9 cut(s) 384, 927, 998, 1020, 1320, 1448, 1632, 2145, 2206
MboI GATC 9 cut(s) 382, 925, 996, 1018, 1318, 1446, 1630, 2143, 2204
MflI RGATCY 5 cut(s) 382, 925, 996, 1446, 2204
MhlI GDGCHC 2 cut(s) 575, 1432
MlyI GAGTC 5 cut(s) 284, 1193, 1487, 2377, 2437
MmeI TCCRAC 6 cut(s) 360, 1063, 1483, 1679, 2182, 2468
Mph1103I ATGCAT 1 cut(s) 541
MroI TCCGGA 1 cut(s) 346
MroNI GCCGGC 1 cut(s) 62
MroXI GAANNNNTTC 4 cut(s) 476, 1306, 1485, 2316
MseI TTAA 9 cut(s) 248, 626, 1122, 1221, 1260, 1737, 1812, 2187, 2506
MslI CAYNNNNRTG 1 cut(s) 1481
MspA1I CMGCKG 3 cut(s) 35, 111, 125
MspI CCGG 5 cut(s) 63, 175, 347, 1255, 2077
MspR9I CCNGG 3 cut(s) 462, 1249, 2358
Mva1269I GAATGC 1 cut(s) 1422
MvaI CCWGG 3 cut(s) 462, 1249, 2358
MvnI CGCG 2 cut(s) 35, 2440
NaeI GCCGGC 1 cut(s) 64
NdeI CATATG 1 cut(s) 730
NdeII GATC 9 cut(s) 382, 925, 996, 1018, 1318, 1446, 1630, 2143, 2204
NgoMIV GCCGGC 1 cut(s) 62
NlaIV GGNNCC 6 cut(s) 75, 76, 116, 257, 1253, 2363
NmuCI GTSAC 3 cut(s) 664, 1490, 2380
NsiI ATGCAT 1 cut(s) 541
NspI RCATGY 3 cut(s) 425, 779, 855
NspV TTCGAA 2 cut(s) 480, 1607
OliI CACNNNNGTG 1 cut(s) 1481
PagI TCATGA 1 cut(s) 697
PauI GCGCGC 1 cut(s) 2438
PciI ACATGT 1 cut(s) 851
PciSI GCTCTTC 1 cut(s) 1828
PcsI WCGNNNNNNNCGW 2 cut(s) 90, 899
PctI GAATGC 1 cut(s) 1422
PdiI GCCGGC 1 cut(s) 64
PdmI GAANNNNTTC 4 cut(s) 476, 1306, 1485, 2316
PfeI GAWTC 4 cut(s) 969, 1244, 1994, 2479
PflFI GACNNNGTC 2 cut(s) 98, 662
PflMI CCANNNNNTGG 1 cut(s) 139
PkrI GCNGC 9 cut(s) 18, 31, 34, 37, 919, 1840, 2169, 2281, 2416
PleI GAGTC 5 cut(s) 283, 1192, 1487, 2377, 2436
PpsI GAGTC 5 cut(s) 283, 1192, 1487, 2377, 2436
PpuMI RGGWCCY 1 cut(s) 74
PscI ACATGT 1 cut(s) 851
PshBI ATTAAT 1 cut(s) 248
Psp5II RGGWCCY 1 cut(s) 74
Psp6I CCWGG 3 cut(s) 460, 1247, 2356
PspFI CCCAGC 1 cut(s) 371
PspGI CCWGG 3 cut(s) 460, 1247, 2356
PspN4I GGNNCC 6 cut(s) 75, 76, 116, 257, 1253, 2363
PspPI GGNCC 8 cut(s) 74, 106, 320, 801, 1252, 1408, 2269, 2350
PspPPI RGGWCCY 1 cut(s) 74
PsrI GAACNNNNNNTAC 2 cut(s) 832, 864
PstI CTGCAG 1 cut(s) 1843
PstNI CAGNNNCTG 2 cut(s) 139, 238
PsuI RGATCY 5 cut(s) 382, 925, 996, 1446, 2204
PsyI GACNNNGTC 2 cut(s) 98, 662
PteI GCGCGC 1 cut(s) 2438
RsaI GTAC 5 cut(s) 293, 612, 1113, 1159, 2499
RsaNI GTAC 5 cut(s) 292, 611, 1112, 1158, 2498
RseI CAYNNNNRTG 1 cut(s) 1481
SacII CCGCGG 1 cut(s) 36
SapI GCTCTTC 1 cut(s) 1828
SaqAI TTAA 9 cut(s) 248, 626, 1122, 1221, 1260, 1737, 1812, 2187, 2506
SatI GCNGC 9 cut(s) 17, 30, 33, 36, 918, 1839, 2168, 2280, 2415
Sau3AI GATC 9 cut(s) 382, 925, 996, 1018, 1318, 1446, 1630, 2143, 2204
Sau96I GGNCC 8 cut(s) 74, 106, 320, 801, 1252, 1408, 2269, 2350
ScaI AGTACT 1 cut(s) 1159
SchI GAGTC 5 cut(s) 284, 1193, 1487, 2377, 2437
ScrFI CCNGG 3 cut(s) 462, 1249, 2358
SduI GDGCHC 2 cut(s) 575, 1432
SfaNI GCATC 8 cut(s) 3, 145, 335, 526, 548, 748, 885, 2029
SfcI CTRYAG 2 cut(s) 807, 1839
Sfr303I CCGCGG 1 cut(s) 36
SfuI TTCGAA 2 cut(s) 480, 1607
SgrBI CCGCGG 1 cut(s) 36
SinI GGWCC 2 cut(s) 74, 2350
SmiMI CAYNNNNRTG 1 cut(s) 1481
SmlI CTYRAG 1 cut(s) 2255
SmoI CTYRAG 1 cut(s) 2255
SsiI CCGC 9 cut(s) 30, 33, 35, 71, 109, 123, 162, 253, 761
SspMI CTAG 7 cut(s) 705, 1152, 1191, 1691, 1947, 2208, 2418
StyD4I CCNGG 3 cut(s) 460, 1247, 2356
TaiI ACGT 1 cut(s) 1729
TaqI TCGA 6 cut(s) 168, 480, 1607, 1904, 1924, 2298
TaqII GACCGA 2 cut(s) 1377, 2367
TatI WGTACW 2 cut(s) 1111, 1157
TauI GCSGC 3 cut(s) 32, 35, 38
TfiI GAWTC 4 cut(s) 969, 1244, 1994, 2479
Tru1I TTAA 9 cut(s) 248, 626, 1122, 1221, 1260, 1737, 1812, 2187, 2506
Tru9I TTAA 9 cut(s) 248, 626, 1122, 1221, 1260, 1737, 1812, 2187, 2506
TscAI CASTG 6 cut(s) 673, 811, 1237, 1357, 1572, 1996
TseFI GTSAC 3 cut(s) 664, 1490, 2380
TseI GCWGC 6 cut(s) 16, 917, 1838, 2167, 2279, 2414
Tsp45I GTSAC 3 cut(s) 664, 1490, 2380
TspGWI ACGGA 2 cut(s) 222, 1493
TspRI CASTG 6 cut(s) 673, 811, 1237, 1357, 1572, 1996
Tth111I GACNNNGTC 2 cut(s) 98, 662
Van91I CCANNNNNTGG 1 cut(s) 139
VpaK11BI GGWCC 2 cut(s) 74, 2350
VspI ATTAAT 1 cut(s) 248
XapI RAATTY 8 cut(s) 262, 493, 1507, 1642, 1897, 2029, 2173, 2182
XbaI TCTAGA 1 cut(s) 2207
XceI RCATGY 3 cut(s) 425, 779, 855
XmiI GTMKAC 2 cut(s) 717, 1685
XmnI GAANNNNTTC 4 cut(s) 476, 1306, 1485, 2316
XspI CTAG 7 cut(s) 705, 1152, 1191, 1691, 1947, 2208, 2418
ZrmI AGTACT 1 cut(s) 1159
Zsp2I ATGCAT 1 cut(s) 541
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.