Rh4BG242900
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4B
OG0002513
Physical Location & Seq
Reverse (-)
40877518 .. 40882685
5168 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4BG242900.1

Sequence Viewer

Length: 2436 bp
ATGGGTGGCCAGATGCAGCAGAGCAATGCCGCCGCGGCAACTGCTCTGTATGACCACCCGGCCGGCAATGCGGGACCCACCAACGATGCCGGCGATGCGGTCATGGCCCGGTGGCTCCAGTCCGCCGGCCTCCAGCATCTGGCCTCACCGTTGGCTTCGACGGCCATCGATAACCGGCTCCTTCCTAACCTTCTCATGCAGGGTTATGGAGCGCAATCTGCTGAAGAGAAACAGAGGCTCTTCAAATTAATGCGCAACCTTAATTTCAATGGGGAGTCCGGTTCGGAGCCATACACACCTACTGCCCAAACATCGGCAGGGGCTGCATCGGAGGGTTTTTACTCTCCGGAGTTCAGGGGGGATTTCGGAGCTGGGCTGTTGGATCTTCATGCTATGGATGACACAGAGCTTCTTTCTGAGCATGTTATGTCCGAACCTTTTGAGCCATCACCCTTTATGCCTGGTGGTATGAAAGCATTTGAAGATGAATTGAATTTGACGAGTGGCGGACAGCAAAGTGTGCTACCTGATCAAGATGCATCAGTTCCATTAGCCCAGAATGAAAAGGAGAGCACAAGGGAAAACAATGTGGCTAAAATTAAAGTTGTGGTACGCAAAAGACCTTTAAACAAGAAGGAACTTTCTCGGAAGGAGGATGATATTGTCACTGTGTATGACAAGTCTTATCTGACAGTTCATGAACCTAAAGTGAAGGTATATTGGGCTACTGTAGAACCAATTATTCCCCTCATTTTTGAGCGAACAAAGGCTACATGTTTTGCTTATGGTCAGACAGGTAGTGGCAAGACATTCACGATGCAACCGTTACCTATCAGAGCTGCAGAAGATCTTGTCAGATTGTTGCACCAGCCAGTTTACCGTAACCAGAGATTCAAATTATGGCTTAGCTATTTTGAGATCTATGGTGGAAAGCTCTATGATCTTCTCAGCGAGAGGAAGAAACTTTGTATGAGAGAAGATGGACGGCAACAAGTTTGCATTGTTGGACTGCAAGAGTTTGAAGTGTCAGATGTACAAATTGTTAAAGAATATATTGAGAGGGGGAATGCTACTAGAAGTACAGGGTCAACTGGTGCTAATGAGGAGTCTTCTAGGTCACATGCTATTTTACAACTTGTGGTAAAAAAGCACACTGAGGTAAAAGATTCCAGGGGGAGGATCAACATAGATGTAAATGAACCCAGAAGTGGGAAGGTTGTGGGAAAGATCTCTTTTATTGATCTTGCTGGTAGTGAAAGAGGTGCTGACACCACTGATAATGACCGACAAACAAGAATTGAGGGAGCAGAAATCAACAAGAGCCTTTTGGCTCTAAAGGAGTGCATTCGTGCTCTGGACAATGACCAGATCCATATACCTTTTCGAGGAAGCAAACTCACAGAAGTGCTCCGTGACTCTTTCGTCGGAAATTCAAGGACAGTAATGATATCTTGTATATCTCCAAATGCAGGGTCATGCGAGCATACACTCAATACTTTGAGATATGCGGATCGGGTCAAAAGTCTTTCAAAAGGTGGCAATTCTCGAAAGGATCAACCTGTAAATTCATTACCTCCAACTAATAAGGATGTTTCATCATCGTCGTCCACTCTGGCTTCTGCTGGTGTAGAGGATATCCATGAGCAACGCCAAGAAGTTAAAATAACTGATACAGGTAGAAGAACTATGGAAAAAGATAGTTTTTCATATGTCCATGAGCAACGCCAAGAAATTAAACCAACTGATACAGGCAGAAGAGCTGCAGAGAAAGAAAGTTTCTCATATATCCCTACTCCTGATTTTGAGAAGCATCCTGCAAATTCATTGAGTAATCCCATCACTATTCGAGAAGAAAAAGGGACGACTTCTAGTTCACTAGATAGGGAGAGATTTGAAGTGAATAATTCTTATAGTGATTCTTACAGTCAGAAGTTGTCCTATCATTCTCAAAATTCAGTTGATGTAGAAGAAAAAGTGCAACTGGCTGAAAAATCACCACCTCGCCGGAAATTAATTAAGGATGAAAAATCAGAAAAGTTGGGCAACTGGCTGAAGAAAGGAGGTGGTTCTGATCTGTCCACCACCAGCTCTAAGCAGCCTAATACTGGTAATTCTAACACAAGCAATGTTGGATCTAGACAGTCTGAGCCTGAAGTTCCTGATGGGAATATCAATGCAATTCTTGAGGAAGAAGAGGCCCTAATTGCTGCCCACAGAAAAGAAATCGAGGATACAATGGAAATAGTTCGTGAAGAAATGAAACTGTTGGCAGAAGTGGACCGACCAGGGAGCCTCATAGACAACTATGTGACTCAGTTGAGCTTTGTGCTTTCTCGCAAGGCAGCTAGTCTGGTTAGTCTCCAAGCGCGCCTCGCAAGGTTCCAGCATAGACTAAAAGAACAAGAAATTCTAAGTCGGAAAAGAGTACCTCGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000070 GO:0000226 GO:0000278 GO:0000280 GO:0000775 GO:0000776 GO:0000819 GO:0000902 GO:0000904 GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005694 GO:0005737 GO:0005794 GO:0005795 GO:0005856 GO:0005871 GO:0005874 GO:0005875 GO:0005886 GO:0006928 GO:0006996 GO:0007010 GO:0007017 GO:0007018 GO:0007019 GO:0007049 GO:0007059 GO:0007080 GO:0007163 GO:0008017 GO:0008092 GO:0008150 GO:0008608 GO:0009505 GO:0009531 GO:0009653 GO:0009832 GO:0009834 GO:0009888 GO:0009987 GO:0010026 GO:0010087 GO:0010089 GO:0010090 GO:0012505 GO:0015630 GO:0015631 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022402 GO:0022411 GO:0030154 GO:0030312 GO:0030951 GO:0030952 GO:0031109 GO:0031984 GO:0032502 GO:0032984 GO:0032989 GO:0032991 GO:0035371 GO:0042546 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043624 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044427 GO:0044430 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0048285 GO:0048468 GO:0048856 GO:0048869 GO:0050000 GO:0050789 GO:0050794 GO:0051010 GO:0051179 GO:0051234 GO:0051261 GO:0051276 GO:0051303 GO:0051310 GO:0051315 GO:0051640 GO:0051641 GO:0051649 GO:0051656 GO:0051983 GO:0065007 GO:0071554 GO:0071669 GO:0071840 GO:0071944 GO:0090058 GO:0090558 GO:0090626 GO:0097435 GO:0098687 GO:0098791 GO:0098813 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0140014 GO:1903047 GO:1903338 GO:1990752
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Kinesin RRM_1

Protein Analysis

811

Amino Acids

90.22

Weight (kDa)

6.32

Isoelectric Point (pI)

47.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Kinesin PF00225 183 - 508 1.9e-88 Kinesin motor domain
Microtub_bd PF16796 253 - 316 1.8e-07 Microtubule binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1421
Acc16I TGCGCA 1 cut(s) 254
AccB7I CCANNNNNTGG 1 cut(s) 139
AccII CGCG 2 cut(s) 35, 2368
AccIII TCCGGA 1 cut(s) 346
AciI CCGC 8 cut(s) 30, 33, 35, 71, 98, 123, 507, 1508
AclWI GGATC 6 cut(s) 390, 1187, 1363, 1518, 1560, 2140
AcoI YGGCCR 3 cut(s) 7, 60, 162
AcsI RAATTY 6 cut(s) 493, 1429, 1564, 1819, 1951, 2406
AcuI CTGAAG 3 cut(s) 243, 2072, 2172
AfaI GTAC 4 cut(s) 612, 1035, 1081, 2427
AfiI CCNNNNNNNGG 8 cut(s) 139, 313, 1176, 1208, 1209, 1385, 1469, 2105
AflIII ACRYGT 1 cut(s) 773
AgsI TTSAA 9 cut(s) 244, 268, 482, 493, 895, 1022, 1434, 1530, 1895
AjnI CCWGG 3 cut(s) 460, 1169, 2284
AleI CACNNNNGTG 1 cut(s) 1403
AluBI AGCT 9 cut(s) 371, 409, 839, 909, 934, 1760, 2088, 2322, 2345
AluI AGCT 9 cut(s) 371, 409, 839, 909, 934, 1760, 2088, 2322, 2345
Alw21I GWGCWC 3 cut(s) 575, 1354, 1410
Alw26I GTCTC 1 cut(s) 2363
AlwI GGATC 6 cut(s) 390, 1187, 1363, 1518, 1560, 2140
AlwNI CAGNNNCTG 2 cut(s) 139, 323
Aor13HI TCCGGA 1 cut(s) 346
AoxI GGCC 7 cut(s) 7, 60, 105, 127, 141, 162, 2196
ApeKI GCWGC 7 cut(s) 16, 323, 839, 1760, 2095, 2207, 2342
ApoI RAATTY 6 cut(s) 493, 1429, 1564, 1819, 1951, 2406
ArsI GACNNNNNNTTYG 2 cut(s) 1457, 1489
AseI ATTAAT 2 cut(s) 248, 2012
Asp700I GAANNNNTTC 1 cut(s) 2244
AspLEI GCGC 4 cut(s) 214, 255, 2368, 2370
AspS9I GGNCC 4 cut(s) 74, 106, 2197, 2278
AsuC2I CCSGG 2 cut(s) 59, 109
AsuHPI GGTGA 3 cut(s) 138, 441, 1986
AvaII GGWCC 2 cut(s) 74, 2278
BalI TGGCCA 1 cut(s) 9
BbsI GAAGAC 1 cut(s) 1101
Bbv12I GWGCWC 3 cut(s) 575, 1354, 1410
BbvI GCAGC 7 cut(s) 28, 310, 826, 1747, 2107, 2194, 2354
BccI CCATC 5 cut(s) 173, 454, 974, 1844, 2156
BceAI ACGGC 2 cut(s) 177, 1001
BciT130I CCWGG 3 cut(s) 462, 1171, 2286
BciVI GTATCC 1 cut(s) 2224
BclI TGATCA 1 cut(s) 529
BcnI CCSGG 2 cut(s) 59, 109
BcoDI GTCTC 1 cut(s) 2363
BfaI CTAG 6 cut(s) 1074, 1113, 1869, 1877, 2136, 2346
BfmI CTRYAG 3 cut(s) 729, 840, 1761
BfuI GTATCC 1 cut(s) 2224
BglI GCCNNNNNGGC 1 cut(s) 35
BglII AGATCT 3 cut(s) 847, 918, 1227
BlpI GCTNAGC 1 cut(s) 905
Bme1390I CCNGG 5 cut(s) 59, 109, 462, 1171, 2286
Bme18I GGWCC 2 cut(s) 74, 2278
BmgT120I GGNCC 4 cut(s) 74, 106, 2197, 2278
BmiI GGNNCC 7 cut(s) 75, 76, 116, 179, 288, 2291, 2381
BmrFI CCNGG 5 cut(s) 59, 109, 462, 1171, 2286
BmsI GCATC 9 cut(s) 3, 76, 85, 145, 335, 526, 548, 807, 1819
BpiI GAAGAC 1 cut(s) 1101
BpmI CTGGAG 2 cut(s) 101, 116
Bpu1102I GCTNAGC 1 cut(s) 905
BpuEI CTTGAG 1 cut(s) 2204
BpuMI CCSGG 2 cut(s) 59, 109
Bsa29I ATCGAT 1 cut(s) 168
BsaJI CCNNGG 3 cut(s) 33, 1170, 2285
BsaWI WCCGGW 2 cut(s) 278, 346
Bsc4I CCNNNNNNNGG 8 cut(s) 139, 313, 1176, 1208, 1209, 1385, 1469, 2105
Bse118I RCCGGY 4 cut(s) 62, 89, 125, 174
Bse1I ACTGG 6 cut(s) 118, 872, 1096, 1986, 2051, 2110
Bse3DI GCAATG 3 cut(s) 31, 73, 2131
BseAI TCCGGA 1 cut(s) 346
BseBI CCWGG 3 cut(s) 462, 1171, 2286
BseCI ATCGAT 1 cut(s) 168
BseDI CCNNGG 3 cut(s) 33, 1170, 2285
BseGI GGATG 5 cut(s) 403, 661, 1594, 1810, 2026
BseLI CCNNNNNNNGG 8 cut(s) 139, 313, 1176, 1208, 1209, 1385, 1469, 2105
BseMI GCAATG 3 cut(s) 31, 73, 2131
BseMII CTCAG 5 cut(s) 408, 961, 1146, 2136, 2327
BseNI ACTGG 6 cut(s) 118, 872, 1096, 1986, 2051, 2110
BsePI GCGCGC 1 cut(s) 2366
BseRI GAGGAG 1 cut(s) 1118
BseX3I CGGCCG 1 cut(s) 60
BseXI GCAGC 7 cut(s) 28, 310, 826, 1747, 2107, 2194, 2354
BseYI CCCAGC 1 cut(s) 371
Bsh1236I CGCG 2 cut(s) 35, 2368
Bsh1285I CGRYCG 1 cut(s) 63
BshFI GGCC 7 cut(s) 9, 62, 107, 129, 143, 164, 2198
BshVI ATCGAT 1 cut(s) 168
BsiEI CGRYCG 1 cut(s) 63
BsiHKAI GWGCWC 3 cut(s) 575, 1354, 1410
BsiSI CCGG 9 cut(s) 59, 63, 90, 109, 126, 175, 279, 347, 2005
BslFI GGGAC 2 cut(s) 87, 1873
BslI CCNNNNNNNGG 8 cut(s) 139, 313, 1176, 1208, 1209, 1385, 1469, 2105
BsmAI GTCTC 1 cut(s) 2363
BsmFI GGGAC 2 cut(s) 87, 1873
BsmI GAATGC 2 cut(s) 1072, 1344
BsnI GGCC 7 cut(s) 9, 62, 107, 129, 143, 164, 2198
Bsp1286I GDGCHC 3 cut(s) 575, 1354, 1410
Bsp13I TCCGGA 1 cut(s) 346
Bsp1407I TGTACA 1 cut(s) 1033
Bsp1720I GCTNAGC 1 cut(s) 905
BspACI CCGC 8 cut(s) 30, 33, 35, 71, 98, 123, 507, 1508
BspANI GGCC 7 cut(s) 9, 62, 107, 129, 143, 164, 2198
BspCNI CTCAG 5 cut(s) 409, 960, 1147, 2137, 2326
BspDI ATCGAT 1 cut(s) 168
BspEI TCCGGA 1 cut(s) 346
BspFNI CGCG 2 cut(s) 35, 2368
BspHI TCATGA 1 cut(s) 697
BspLI GGNNCC 7 cut(s) 75, 76, 116, 179, 288, 2291, 2381
BspMAI CTGCAG 2 cut(s) 844, 1765
BspPI GGATC 6 cut(s) 390, 1187, 1363, 1518, 1560, 2140
BspQI GCTCTTC 2 cut(s) 245, 1750
BsrDI GCAATG 3 cut(s) 31, 73, 2131
BsrFI RCCGGY 4 cut(s) 62, 89, 125, 174
BsrGI TGTACA 1 cut(s) 1033
BsrI ACTGG 6 cut(s) 118, 872, 1096, 1986, 2051, 2110
BssAI RCCGGY 4 cut(s) 62, 89, 125, 174
BssECI CCNNGG 3 cut(s) 33, 1170, 2285
BssHII GCGCGC 1 cut(s) 2366
Bst2UI CCWGG 3 cut(s) 462, 1171, 2286
Bst6I CTCTTC 4 cut(s) 219, 245, 1750, 2187
BstAPI GCANNNNNTGC 2 cut(s) 323, 520
BstAUI TGTACA 1 cut(s) 1033
BstC8I GCNNGC 5 cut(s) 64, 91, 127, 1481, 2368
BstDEI CTNAG 8 cut(s) 417, 905, 947, 1155, 2091, 2145, 2313, 2411
BstDSI CCRYGG 1 cut(s) 33
BstENI CCTNNNNNAGG 1 cut(s) 1383
BstF5I GGATG 5 cut(s) 403, 661, 1594, 1810, 2026
BstFNI CGCG 2 cut(s) 35, 2368
BstHHI GCGC 4 cut(s) 214, 255, 2368, 2370
BstMAI GTCTC 1 cut(s) 2363
BstMCI CGRYCG 1 cut(s) 63
BstNI CCWGG 3 cut(s) 462, 1171, 2286
BstNSI RCATGY 3 cut(s) 425, 777, 1124
BstSCI CCNGG 5 cut(s) 57, 107, 460, 1169, 2284
BstSFI CTRYAG 3 cut(s) 729, 840, 1761
BstUI CGCG 2 cut(s) 35, 2368
BstV1I GCAGC 7 cut(s) 28, 310, 826, 1747, 2107, 2194, 2354
BstV2I GAAGAC 1 cut(s) 1101
BstX2I RGATCY 6 cut(s) 382, 847, 918, 1227, 1368, 2132
BstYI RGATCY 6 cut(s) 382, 847, 918, 1227, 1368, 2132
BstZI CGGCCG 1 cut(s) 60
Bsu15I ATCGAT 1 cut(s) 168
BsuI GTATCC 1 cut(s) 2224
BsuRI GGCC 7 cut(s) 9, 62, 107, 129, 143, 164, 2198
BsuTUI ATCGAT 1 cut(s) 168
BtgI CCRYGG 1 cut(s) 33
BtgZI GCGATG 1 cut(s) 108
BtsCI GGATG 5 cut(s) 403, 661, 1594, 1810, 2026
BtsIMutI CAGTG 3 cut(s) 666, 1152, 1272
Cac8I GCNNGC 5 cut(s) 64, 91, 127, 1481, 2368
CaiI CAGNNNCTG 2 cut(s) 139, 323
CciI TCATGA 1 cut(s) 697
CfoI GCGC 4 cut(s) 214, 255, 2368, 2370
Cfr10I RCCGGY 4 cut(s) 62, 89, 125, 174
Cfr13I GGNCC 4 cut(s) 74, 106, 2197, 2278
Cfr42I CCGCGG 1 cut(s) 36
ClaI ATCGAT 1 cut(s) 168
Csp6I GTAC 4 cut(s) 611, 1034, 1080, 2426
CviQI GTAC 4 cut(s) 611, 1034, 1080, 2426
DdeI CTNAG 8 cut(s) 417, 905, 947, 1155, 2091, 2145, 2313, 2411
DraI TTTAAA 1 cut(s) 627
DrdI GACNNNNNNGTC 1 cut(s) 1421
DseDI GACNNNNNNGTC 1 cut(s) 1421
EaeI YGGCCR 3 cut(s) 7, 60, 162
EagI CGGCCG 1 cut(s) 60
Eam1104I CTCTTC 4 cut(s) 219, 245, 1750, 2187
EarI CTCTTC 4 cut(s) 219, 245, 1750, 2187
EciI GGCGGA 2 cut(s) 112, 522
EclXI CGGCCG 1 cut(s) 60
Eco32I GATATC 2 cut(s) 1449, 1636
Eco47I GGWCC 2 cut(s) 74, 2278
Eco52I CGGCCG 1 cut(s) 60
Eco57I CTGAAG 3 cut(s) 243, 2072, 2172
EcoNI CCTNNNNNAGG 1 cut(s) 1383
EcoO109I RGGNCCY 2 cut(s) 74, 2197
EcoRII CCWGG 3 cut(s) 460, 1169, 2284
EcoRV GATATC 2 cut(s) 1449, 1636
EcoT22I ATGCAT 1 cut(s) 541
FaqI GGGAC 2 cut(s) 87, 1873
FauI CCCGC 1 cut(s) 64
FauNDI CATATG 1 cut(s) 1708
FbaI TGATCA 1 cut(s) 529
FokI GGATG 5 cut(s) 410, 668, 1601, 1797, 2033
FspBI CTAG 6 cut(s) 1074, 1113, 1869, 1877, 2136, 2346
FspI TGCGCA 1 cut(s) 254
GlaI GCGC 4 cut(s) 213, 254, 2367, 2369
GsaI CCCAGC 1 cut(s) 375
GsuI CTGGAG 2 cut(s) 101, 116
HaeIII GGCC 7 cut(s) 9, 62, 107, 129, 143, 164, 2198
HapII CCGG 9 cut(s) 59, 63, 90, 109, 126, 175, 279, 347, 2005
HhaI GCGC 4 cut(s) 214, 255, 2368, 2370
Hin6I GCGC 4 cut(s) 212, 253, 2366, 2368
HinP1I GCGC 4 cut(s) 212, 253, 2366, 2368
HincII GTYRAC 1 cut(s) 1089
HindII GTYRAC 1 cut(s) 1089
HinfI GANTC 7 cut(s) 275, 891, 1106, 1166, 1415, 1916, 2311
HpaII CCGG 9 cut(s) 59, 63, 90, 109, 126, 175, 279, 347, 2005
HphI GGTGA 3 cut(s) 138, 441, 1986
Hpy166II GTNNAC 6 cut(s) 877, 1089, 1608, 1874, 2079, 2278
Hpy8I GTNNAC 6 cut(s) 877, 1089, 1608, 1874, 2079, 2278
Hpy99I CGWCG 3 cut(s) 163, 1427, 1606
HpyAV CCTTC 6 cut(s) 191, 200, 628, 643, 706, 1207
HpyF3I CTNAG 8 cut(s) 417, 905, 947, 1155, 2091, 2145, 2313, 2411
HspAI GCGC 4 cut(s) 212, 253, 2366, 2368
KflI GGGWCCC 1 cut(s) 74
Kpn2I TCCGGA 1 cut(s) 346
KroI GCCGGC 3 cut(s) 62, 89, 125
KroNI GCCGGC 3 cut(s) 64, 91, 127
Ksp22I TGATCA 1 cut(s) 529
KspI CCGCGG 1 cut(s) 36
LguI GCTCTTC 2 cut(s) 245, 1750
LmnI GCTCC 8 cut(s) 120, 183, 209, 286, 368, 1304, 1413, 2289
Lsp1109I GCAGC 7 cut(s) 28, 310, 826, 1747, 2107, 2194, 2354
LweI GCATC 9 cut(s) 3, 76, 85, 145, 335, 526, 548, 807, 1819
MaeI CTAG 6 cut(s) 1074, 1113, 1869, 1877, 2136, 2346
MaeIII GTNAC 6 cut(s) 664, 825, 881, 1116, 1412, 2308
MflI RGATCY 6 cut(s) 382, 847, 918, 1227, 1368, 2132
MhlI GDGCHC 3 cut(s) 575, 1354, 1410
MlsI TGGCCA 1 cut(s) 9
MluNI TGGCCA 1 cut(s) 9
MlyI GAGTC 4 cut(s) 284, 1115, 1409, 2305
MmeI TCCRAC 6 cut(s) 360, 985, 1405, 1601, 2110, 2396
Mox20I TGGCCA 1 cut(s) 9
Mph1103I ATGCAT 1 cut(s) 541
MroI TCCGGA 1 cut(s) 346
MroNI GCCGGC 3 cut(s) 62, 89, 125
MroXI GAANNNNTTC 1 cut(s) 2244
MscI TGGCCA 1 cut(s) 9
MslI CAYNNNNRTG 1 cut(s) 1403
Msp20I TGGCCA 1 cut(s) 9
MspA1I CMGCKG 1 cut(s) 35
MspI CCGG 9 cut(s) 59, 63, 90, 109, 126, 175, 279, 347, 2005
MspR9I CCNGG 5 cut(s) 59, 109, 462, 1171, 2286
Mva1269I GAATGC 2 cut(s) 1072, 1344
MvaI CCWGG 3 cut(s) 462, 1171, 2286
MvnI CGCG 2 cut(s) 35, 2368
NaeI GCCGGC 3 cut(s) 64, 91, 127
NciI CCSGG 2 cut(s) 59, 109
NdeI CATATG 1 cut(s) 1708
NgoMIV GCCGGC 3 cut(s) 62, 89, 125
NlaIV GGNNCC 7 cut(s) 75, 76, 116, 179, 288, 2291, 2381
NmuCI GTSAC 4 cut(s) 664, 1116, 1412, 2308
NsbI TGCGCA 1 cut(s) 254
NsiI ATGCAT 1 cut(s) 541
NspI RCATGY 3 cut(s) 425, 777, 1124
OliI CACNNNNGTG 1 cut(s) 1403
PacI TTAATTAA 1 cut(s) 2016
PagI TCATGA 1 cut(s) 697
PauI GCGCGC 1 cut(s) 2366
PciI ACATGT 1 cut(s) 773
PciSI GCTCTTC 2 cut(s) 245, 1750
PcsI WCGNNNNNNNCGW 2 cut(s) 90, 821
PctI GAATGC 2 cut(s) 1072, 1344
PdiI GCCGGC 3 cut(s) 64, 91, 127
PdmI GAANNNNTTC 1 cut(s) 2244
PfeI GAWTC 3 cut(s) 891, 1166, 1916
PflMI CCANNNNNTGG 1 cut(s) 139
PleI GAGTC 4 cut(s) 283, 1114, 1409, 2305
PpsI GAGTC 4 cut(s) 283, 1114, 1409, 2305
PpuMI RGGWCCY 1 cut(s) 74
PscI ACATGT 1 cut(s) 773
PshBI ATTAAT 2 cut(s) 248, 2012
Psp5II RGGWCCY 1 cut(s) 74
Psp6I CCWGG 3 cut(s) 460, 1169, 2284
PspFI CCCAGC 1 cut(s) 371
PspGI CCWGG 3 cut(s) 460, 1169, 2284
PspN4I GGNNCC 7 cut(s) 75, 76, 116, 179, 288, 2291, 2381
PspPI GGNCC 4 cut(s) 74, 106, 2197, 2278
PspPPI RGGWCCY 1 cut(s) 74
PsrI GAACNNNNNNTAC 2 cut(s) 754, 786
PstI CTGCAG 2 cut(s) 844, 1765
PstNI CAGNNNCTG 2 cut(s) 139, 323
PsuI RGATCY 6 cut(s) 382, 847, 918, 1227, 1368, 2132
PteI GCGCGC 1 cut(s) 2366
RsaI GTAC 4 cut(s) 612, 1035, 1081, 2427
RsaNI GTAC 4 cut(s) 611, 1034, 1080, 2426
RseI CAYNNNNRTG 1 cut(s) 1403
SacII CCGCGG 1 cut(s) 36
SapI GCTCTTC 2 cut(s) 245, 1750
Sau96I GGNCC 4 cut(s) 74, 106, 2197, 2278
SchI GAGTC 4 cut(s) 284, 1115, 1409, 2305
ScrFI CCNGG 5 cut(s) 59, 109, 462, 1171, 2286
SduI GDGCHC 3 cut(s) 575, 1354, 1410
SfaNI GCATC 9 cut(s) 3, 76, 85, 145, 335, 526, 548, 807, 1819
SfcI CTRYAG 3 cut(s) 729, 840, 1761
Sfr303I CCGCGG 1 cut(s) 36
SgrBI CCGCGG 1 cut(s) 36
SinI GGWCC 2 cut(s) 74, 2278
SmiMI CAYNNNNRTG 1 cut(s) 1403
SmlI CTYRAG 1 cut(s) 2183
SmoI CTYRAG 1 cut(s) 2183
SsiI CCGC 8 cut(s) 30, 33, 35, 71, 98, 123, 507, 1508
SspMI CTAG 6 cut(s) 1074, 1113, 1869, 1877, 2136, 2346
StyD4I CCNGG 5 cut(s) 57, 107, 460, 1169, 2284
TaqI TCGA 6 cut(s) 158, 168, 1384, 1546, 1846, 2226
TaqII GACCGA 2 cut(s) 1299, 2295
TatI WGTACW 2 cut(s) 1033, 1079
TauI GCSGC 3 cut(s) 32, 35, 38
TfiI GAWTC 3 cut(s) 891, 1166, 1916
TscAI CASTG 3 cut(s) 673, 1159, 1279
TseFI GTSAC 4 cut(s) 664, 1116, 1412, 2308
TseI GCWGC 7 cut(s) 16, 323, 839, 1760, 2095, 2207, 2342
Tsp45I GTSAC 4 cut(s) 664, 1116, 1412, 2308
TspGWI ACGGA 1 cut(s) 1400
TspRI CASTG 3 cut(s) 673, 1159, 1279
Van91I CCANNNNNTGG 1 cut(s) 139
VpaK11BI GGWCC 2 cut(s) 74, 2278
VspI ATTAAT 2 cut(s) 248, 2012
XagI CCTNNNNNAGG 1 cut(s) 1383
XapI RAATTY 6 cut(s) 493, 1429, 1564, 1819, 1951, 2406
XbaI TCTAGA 1 cut(s) 2135
XceI RCATGY 3 cut(s) 425, 777, 1124
XmnI GAANNNNTTC 1 cut(s) 2244
XspI CTAG 6 cut(s) 1074, 1113, 1869, 1877, 2136, 2346
Zsp2I ATGCAT 1 cut(s) 541
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.