pycom13g14340
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
OG0002513
Physical Location & Seq
Forward (+)
10354471 .. 10356055
1585 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g14340.1

Sequence Viewer

Length: 909 bp
ATGATATCTTGCATTTCTCCAAATGCAGGGTCATGCGAGCATACACTTAATACTTTGAGATATGCAGATCGCGTGAAAAGTCTTTCAAAAGGTGGCAATGCTAGAAAGGATCAAGCCGTAAATTCATTACCACCAGCGAATAAGGATGTTTCATTAGCATCTTCTACACTGGTTTCTTCTGAGGTAGAGGATGTCCGTGAGCAACATCAAGAAGTTAAAGTAGCTGATACAGGTAGAAGAGCTGTGGAGAAAGAAAGTTTCTCATATATCCCTCCTACTCCAGAGTTTGACAAGCAGCCAGCAAAGTCATCATCAAGTAATCCCATCAATGTTCGGGAAGAAAGTGGGGTGCCTTCTGGTTCAATGGACAGGGAGAGATTTGAAATGAATAATTCATATGGTGATAATTACAGTCAGAAGTTGCCCAATTATTCTAAAAACTCGGTTGATACAGAAGAGAGAGTACAAAAGGTGTCACCACCTCGTAGGAAAGTAACCAAGGATGAAAAATCAGAAAGGTTGGGGAACTGGCCGAAAAAAGGTGGTTCGGATCTTTCCACTACAAGCACTAAGCAGCAAAGTACAGGAATTTATAACGCAAGCAATGCTGGATCCAGACAATCTGAGCCTGAAGTTCCTGATGGGAATATCAATGCCATTCTTGAGGAGGAAGAGGCCCTTATTGCTGCCCATAGAAAAGAAATTGAGGATACAATGGAAATTGTTCGCGAAGAAATGAAACTGTTGGCGGCAGTGGACCAACCGGGGAGCCGCATAGACGACTATGTGACCCAGTTGAATTTTGTTCTTTCCCGCAAGGCAGCCGGTCTGACGCCGGACTTTGTTCACATCCAGACTTCTGGCTTGAAGCACGGGAATGGGGATAGGATTCGTGTCTTTTGCCGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000070 GO:0000226 GO:0000278 GO:0000280 GO:0000775 GO:0000776 GO:0000819 GO:0000902 GO:0000904 GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005694 GO:0005737 GO:0005794 GO:0005795 GO:0005856 GO:0005871 GO:0005874 GO:0005875 GO:0005886 GO:0006928 GO:0006996 GO:0007010 GO:0007017 GO:0007018 GO:0007019 GO:0007049 GO:0007059 GO:0007080 GO:0007163 GO:0008017 GO:0008092 GO:0008150 GO:0008608 GO:0009505 GO:0009531 GO:0009653 GO:0009832 GO:0009834 GO:0009888 GO:0009987 GO:0010026 GO:0010087 GO:0010089 GO:0010090 GO:0012505 GO:0015630 GO:0015631 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022402 GO:0022411 GO:0030154 GO:0030312 GO:0030951 GO:0030952 GO:0031109 GO:0031984 GO:0032502 GO:0032984 GO:0032989 GO:0032991 GO:0035371 GO:0042546 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043624 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044427 GO:0044430 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0048285 GO:0048468 GO:0048856 GO:0048869 GO:0050000 GO:0050789 GO:0050794 GO:0051010 GO:0051179 GO:0051234 GO:0051261 GO:0051276 GO:0051303 GO:0051310 GO:0051315 GO:0051640 GO:0051641 GO:0051649 GO:0051656 GO:0051983 GO:0065007 GO:0071554 GO:0071669 GO:0071840 GO:0071944 GO:0090058 GO:0090558 GO:0090626 GO:0097435 GO:0098687 GO:0098791 GO:0098813 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0140014 GO:1903047 GO:1903338 GO:1990752
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Kinesin RRM_1

Protein Analysis

303

Amino Acids

33.37

Weight (kDa)

6.06

Isoelectric Point (pI)

48.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 594
AccB1I GGYRCC 1 cut(s) 349
AccII CGCG 2 cut(s) 72, 729
AciI CCGC 3 cut(s) 749, 772, 814
AclWI GGATC 4 cut(s) 117, 558, 606, 619
AcoI YGGCCR 1 cut(s) 530
AcsI RAATTY 3 cut(s) 121, 588, 799
AcuI CTGAAG 1 cut(s) 651
AcyI GRCGYC 1 cut(s) 833
AfaI GTAC 2 cut(s) 465, 583
AfiI CCNNNNNNNGG 2 cut(s) 26, 539
AgsI TTSAA 5 cut(s) 87, 363, 383, 799, 868
AluBI AGCT 2 cut(s) 224, 242
AluI AGCT 2 cut(s) 224, 242
AlwI GGATC 4 cut(s) 117, 558, 606, 619
AoxI GGCC 2 cut(s) 530, 675
ApeKI GCWGC 4 cut(s) 295, 574, 686, 821
ApoI RAATTY 3 cut(s) 121, 588, 799
ArsI GACNNNNNNTTYG 2 cut(s) 14, 46
Asp700I GAANNNNTTC 1 cut(s) 723
AspS9I GGNCC 2 cut(s) 676, 757
AsuC2I CCSGG 1 cut(s) 765
AsuHPI GGTGA 2 cut(s) 413, 468
AvaII GGWCC 1 cut(s) 757
BamHI GGATCC 1 cut(s) 611
BanI GGYRCC 1 cut(s) 349
BarI GAAGNNNNNNTAC 2 cut(s) 447, 479
BbvI GCAGC 4 cut(s) 307, 586, 673, 833
BccI CCATC 2 cut(s) 332, 635
BceAI ACGGC 1 cut(s) 101
BciVI GTATCC 1 cut(s) 703
BcnI CCSGG 1 cut(s) 765
BfaI CTAG 1 cut(s) 102
BfuI GTATCC 1 cut(s) 703
BisI GCNGC 6 cut(s) 296, 575, 687, 750, 772, 822
BlsI GCNGC 6 cut(s) 297, 576, 688, 751, 773, 823
Bme1390I CCNGG 1 cut(s) 765
Bme18I GGWCC 1 cut(s) 757
BmgT120I GGNCC 2 cut(s) 676, 757
BmiI GGNNCC 3 cut(s) 351, 613, 770
BmrFI CCNGG 1 cut(s) 765
BmrI ACTGGG 1 cut(s) 787
BmsI GCATC 1 cut(s) 167
BmuI ACTGGG 1 cut(s) 787
BpmI CTGGAG 1 cut(s) 264
BpuEI CTTGAG 1 cut(s) 683
BpuMI CCSGG 1 cut(s) 765
BsaHI GRCGYC 1 cut(s) 833
BsaJI CCNNGG 2 cut(s) 498, 764
Bsc4I CCNNNNNNNGG 2 cut(s) 26, 539
Bse118I RCCGGY 2 cut(s) 824, 903
Bse1I ACTGG 3 cut(s) 174, 533, 793
Bse3DI GCAATG 2 cut(s) 103, 610
BseDI CCNNGG 2 cut(s) 498, 764
BseGI GGATG 4 cut(s) 151, 196, 508, 849
BseLI CCNNNNNNNGG 2 cut(s) 26, 539
BseMI GCAATG 2 cut(s) 103, 610
BseMII CTCAG 2 cut(s) 171, 615
BseNI ACTGG 3 cut(s) 174, 533, 793
BseRI GAGGAG 1 cut(s) 680
BseXI GCAGC 4 cut(s) 307, 586, 673, 833
Bsh1236I CGCG 2 cut(s) 72, 729
BshFI GGCC 2 cut(s) 532, 677
BshNI GGYRCC 1 cut(s) 349
BsiSI CCGG 4 cut(s) 764, 825, 836, 904
BslI CCNNNNNNNGG 2 cut(s) 26, 539
BsnI GGCC 2 cut(s) 532, 677
Bsp143I GATC 4 cut(s) 67, 109, 550, 611
Bsp68I TCGCGA 1 cut(s) 729
BspACI CCGC 3 cut(s) 749, 772, 814
BspANI GGCC 2 cut(s) 532, 677
BspCNI CTCAG 2 cut(s) 172, 616
BspFNI CGCG 2 cut(s) 72, 729
BspLI GGNNCC 3 cut(s) 351, 613, 770
BspPI GGATC 4 cut(s) 117, 558, 606, 619
BspQI GCTCTTC 1 cut(s) 232
BspT107I GGYRCC 1 cut(s) 349
BsrDI GCAATG 2 cut(s) 103, 610
BsrFI RCCGGY 2 cut(s) 824, 903
BsrI ACTGG 3 cut(s) 174, 533, 793
BssAI RCCGGY 2 cut(s) 824, 903
BssECI CCNNGG 2 cut(s) 498, 764
BssMI GATC 4 cut(s) 67, 109, 550, 611
BssNI GRCGYC 1 cut(s) 833
BssT1I CCWWGG 1 cut(s) 498
Bst4CI ACNGT 2 cut(s) 413, 744
Bst6I CTCTTC 3 cut(s) 232, 450, 666
BstACI GRCGYC 1 cut(s) 833
BstAPI GCANNNNNTGC 1 cut(s) 605
BstC8I GCNNGC 3 cut(s) 38, 300, 601
BstDEI CTNAG 3 cut(s) 180, 570, 624
BstF5I GGATG 4 cut(s) 151, 196, 508, 849
BstFNI CGCG 2 cut(s) 72, 729
BstKTI GATC 4 cut(s) 70, 112, 553, 614
BstMBI GATC 4 cut(s) 67, 109, 550, 611
BstMWI GCNNNNNNNGC 2 cut(s) 605, 683
BstSCI CCNGG 1 cut(s) 763
BstUI CGCG 2 cut(s) 72, 729
BstV1I GCAGC 4 cut(s) 307, 586, 673, 833
BstX2I RGATCY 2 cut(s) 550, 611
BstXI CCANNNNNNTGG 1 cut(s) 860
BstYI RGATCY 2 cut(s) 550, 611
BsuI GTATCC 1 cut(s) 703
BsuRI GGCC 2 cut(s) 532, 677
BtsCI GGATG 4 cut(s) 151, 196, 508, 849
BtsI GCAGTG 1 cut(s) 759
BtsIMutI CAGTG 2 cut(s) 167, 759
BtuMI TCGCGA 1 cut(s) 729
Cac8I GCNNGC 3 cut(s) 38, 300, 601
Cfr10I RCCGGY 2 cut(s) 824, 903
Cfr13I GGNCC 2 cut(s) 676, 757
CseI GACGC 1 cut(s) 841
Csp6I GTAC 2 cut(s) 464, 582
CviAII CATG 1 cut(s) 33
CviQI GTAC 2 cut(s) 464, 582
DdeI CTNAG 3 cut(s) 180, 570, 624
DpnI GATC 4 cut(s) 69, 111, 552, 613
DpnII GATC 4 cut(s) 67, 109, 550, 611
EaeI YGGCCR 1 cut(s) 530
Eam1104I CTCTTC 3 cut(s) 232, 450, 666
EarI CTCTTC 3 cut(s) 232, 450, 666
Eco130I CCWWGG 1 cut(s) 498
Eco32I GATATC 1 cut(s) 6
Eco47I GGWCC 1 cut(s) 757
Eco57I CTGAAG 1 cut(s) 651
EcoO109I RGGNCCY 1 cut(s) 676
EcoRV GATATC 1 cut(s) 6
EcoT14I CCWWGG 1 cut(s) 498
ErhI CCWWGG 1 cut(s) 498
FaeI CATG 1 cut(s) 36
FalI AAGNNNNNCTT 2 cut(s) 663, 695
FatI CATG 1 cut(s) 32
FauI CCCGC 1 cut(s) 821
FauNDI CATATG 1 cut(s) 397
Fnu4HI GCNGC 6 cut(s) 296, 575, 687, 750, 772, 822
FokI GGATG 4 cut(s) 158, 203, 515, 836
Fsp4HI GCNGC 6 cut(s) 296, 575, 687, 750, 772, 822
FspBI CTAG 1 cut(s) 102
GluI GCNGC 6 cut(s) 296, 575, 687, 750, 772, 822
GsuI CTGGAG 1 cut(s) 264
HaeIII GGCC 2 cut(s) 532, 677
HapII CCGG 4 cut(s) 764, 825, 836, 904
HgaI GACGC 1 cut(s) 841
Hin1I GRCGYC 1 cut(s) 833
Hin1II CATG 1 cut(s) 36
HinfI GANTC 1 cut(s) 889
HpaII CCGG 4 cut(s) 764, 825, 836, 904
HphI GGTGA 2 cut(s) 413, 468
Hpy166II GTNNAC 2 cut(s) 757, 847
Hpy188I TCNGA 6 cut(s) 181, 417, 514, 550, 625, 831
Hpy188III TCNNGA 8 cut(s) 209, 281, 335, 615, 638, 662, 728, 853
Hpy8I GTNNAC 2 cut(s) 757, 847
HpyAV CCTTC 1 cut(s) 363
HpyCH4III ACNGT 2 cut(s) 413, 744
HpyCH4V TGCA 3 cut(s) 12, 26, 65
HpyF10VI GCNNNNNNNGC 2 cut(s) 605, 683
HpyF3I CTNAG 3 cut(s) 180, 570, 624
Hsp92I GRCGYC 1 cut(s) 833
Hsp92II CATG 1 cut(s) 36
Kzo9I GATC 4 cut(s) 67, 109, 550, 611
LguI GCTCTTC 1 cut(s) 232
LmnI GCTCC 1 cut(s) 768
Lsp1109I GCAGC 4 cut(s) 307, 586, 673, 833
LweI GCATC 1 cut(s) 167
MaeI CTAG 1 cut(s) 102
MaeIII GTNAC 3 cut(s) 474, 493, 787
MalI GATC 4 cut(s) 69, 111, 552, 613
MboI GATC 4 cut(s) 67, 109, 550, 611
MboII GAAGA 7 cut(s) 153, 168, 249, 350, 467, 683, 743
MflI RGATCY 2 cut(s) 550, 611
MluCI AATT 8 cut(s) 121, 391, 406, 427, 588, 702, 720, 799
MnlI CCTC 8 cut(s) 175, 181, 282, 492, 658, 661, 667, 700
MroXI GAANNNNTTC 1 cut(s) 723
MseI TTAA 2 cut(s) 48, 216
MslI CAYNNNNRTG 1 cut(s) 876
MspI CCGG 4 cut(s) 764, 825, 836, 904
MspR9I CCNGG 1 cut(s) 765
MvnI CGCG 2 cut(s) 72, 729
MwoI GCNNNNNNNGC 2 cut(s) 605, 683
NciI CCSGG 1 cut(s) 765
NdeI CATATG 1 cut(s) 397
NdeII GATC 4 cut(s) 67, 109, 550, 611
NlaIII CATG 1 cut(s) 36
NlaIV GGNNCC 3 cut(s) 351, 613, 770
NmuCI GTSAC 2 cut(s) 474, 787
NruI TCGCGA 1 cut(s) 729
PciSI GCTCTTC 1 cut(s) 232
PdmI GAANNNNTTC 1 cut(s) 723
PfeI GAWTC 1 cut(s) 889
PkrI GCNGC 6 cut(s) 297, 576, 688, 751, 773, 823
PsiI TTATAA 1 cut(s) 594
PspN4I GGNNCC 3 cut(s) 351, 613, 770
PspPI GGNCC 2 cut(s) 676, 757
PsuI RGATCY 2 cut(s) 550, 611
RruI TCGCGA 1 cut(s) 729
RsaI GTAC 2 cut(s) 465, 583
RsaNI GTAC 2 cut(s) 464, 582
RseI CAYNNNNRTG 1 cut(s) 876
SapI GCTCTTC 1 cut(s) 232
SaqAI TTAA 2 cut(s) 48, 216
SatI GCNGC 6 cut(s) 296, 575, 687, 750, 772, 822
Sau3AI GATC 4 cut(s) 67, 109, 550, 611
Sau96I GGNCC 2 cut(s) 676, 757
ScrFI CCNGG 1 cut(s) 765
SetI ASST 9 cut(s) 94, 186, 226, 235, 244, 474, 484, 521, 544
SfaNI GCATC 1 cut(s) 167
SinI GGWCC 1 cut(s) 757
SmiMI CAYNNNNRTG 1 cut(s) 876
SmlI CTYRAG 1 cut(s) 662
SmoI CTYRAG 1 cut(s) 662
Sse9I AATT 8 cut(s) 121, 391, 406, 427, 588, 702, 720, 799
SsiI CCGC 3 cut(s) 749, 772, 814
SspMI CTAG 1 cut(s) 102
StyD4I CCNGG 1 cut(s) 763
StyI CCWWGG 1 cut(s) 498
TaaI ACNGT 2 cut(s) 413, 744
TasI AATT 8 cut(s) 121, 391, 406, 427, 588, 702, 720, 799
TatI WGTACW 2 cut(s) 463, 581
TauI GCSGC 2 cut(s) 752, 774
TfiI GAWTC 1 cut(s) 889
Tru1I TTAA 2 cut(s) 48, 216
Tru9I TTAA 2 cut(s) 48, 216
TscAI CASTG 2 cut(s) 174, 759
TseFI GTSAC 2 cut(s) 474, 787
TseI GCWGC 4 cut(s) 295, 574, 686, 821
Tsp45I GTSAC 2 cut(s) 474, 787
TspDTI ATGAA 6 cut(s) 114, 141, 384, 401, 519, 752
TspGWI ACGGA 1 cut(s) 185
TspRI CASTG 2 cut(s) 174, 759
VpaK11BI GGWCC 1 cut(s) 757
XapI RAATTY 3 cut(s) 121, 588, 799
XmnI GAANNNNTTC 1 cut(s) 723
XspI CTAG 1 cut(s) 102
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.