Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr13

Orthogroup ID

OG0002513

Physical Location & Seq

Genomic Coordinates Forward (+)

13581713 .. 13587793

Gene Structure 6081 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD13G1167700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2445 bp

ATGGGTGGCCAGATGCAGCAGAGCAATGCCGCCGCGGCAACCGCTCTGTACGACCACGCCACCGGCGCTGCCGCAGGGCCTCTGCACAATGCAGGGCCGACAGGTGATGCTGGTGATGCGGTCATGGCCCGTTGGCTCCAGTCCGCCGGGTTGCAGCATCTGGCCTCACCAGCTTCCACGGGCATTGACAATCGTCTCCTTCCCAATCTCCTCATGCAGGGTTATGGAGCTCAATCTGCCGAAGAGAAGCAGAGGCTTTTCAAATTAATGCGAAACCTCAATTTCAATGGGGAGTCTGGTTCTGAGCCATACACACCTACTGCCCAATCTCTGGGAGGAGCTGCATCGGATGGTTTATATTCTCCGGAATTAAGGGGTGATTTCGGAGCGGGGTTGTTGGATCTTCATGCTATGGATGATACAGAGCTTCTGTCCGAGCATGTCATCTCTGAACCCTTTGAGCCATCACCATTTATGCCTGGTGGTAAAGAATTTGAGGATGAGTTGAATTTGACAAGTAATAGGCAGCAAAGAGTGCTACCTGATCCAGATCCATCATTTCCATTAGCCCAGAGTGAAAAGGAGAGCACAAAGGAAAACAATGTGGCTAAGATTAAAGTTGTGGTACGCAAAAGACCTTTGAACAAGAAGGAGCTTTCACGGAAGGAGGAGGATATTGTAACCGTGTATGACAATGCTTATTTGACAGTCCATGAACCCAAACTAAAGGTGGACTTGACTGCATACGTGGAGAAGCATGAATTTTGTTTTGATGCTGTACTGAATGAGCAAGTTTCAAATGATGAGGTATACCGGGCTACTGTAGAACCAATCATTCCCATAATTTTTGAGCGAACAAAGGCTACATGTTTTGCTTATGGTCAAACAGGTAGTGGTAAGACATTCACAATGCAACCGTTACCTATCAGAGCTGCAGAAGACCTCGTCAGATTGTTACATCAGCCAGTTTACCGTAACCAGAGATTCAAATTGTGGCTTAGCTATTTTGAGATTTATGGTGGAAAGCTCTTTGATCTTCTCAGTGATAGGAAGAAACTATGTATGAGAGAAGATGGACGACAACAAGTTTGCATTGTTGGACTGCAAGAGTTTGAAGTTTCAGATGTACAAATTGTTAAAGAATTTATTGAGAGGGGGAATGCTTCTAGAAGTACTGGATCGACAGGTGCTAATGAGGAGTCTTCTCGGTCTCATGCTATTTTACAACTTGTTGTTAAAAAGCACACTGAGGTAAAAGATTCCAGGCGAAACATTGATGTAAATGAATCTAGAAGTGGGAAGGTTGTGGGAAAGATCTCTTTTATTGATCTTGCTGGTAGTGAAAGGGGTGCCGACACCACTGATAATGACCGACAAACAAGAATTGAAGGAGCAGAAATTAACAAGAGCCTTTTGGCACTTAAGGAGTGCATTCGTGCCCTGGACAATGATCAGATCCATATACCTTTCCGTGGAAGCAAACTCACAGAAGTGCTCCGTGACTCCTTTGTTGGAAATTCAAGGACTGTTATGATATCTTGCATTTCTCCAAATGCAGGGTCATGCGAGCATACACTTAATACTTTGAGATATGCAGATCGCGTGAAAAGTCTTTCAAAGGGTGGCAATGCTAGAAAGGATCAAGCCATAAATTCATTACCACCAGCGAATAGGGATGTTTCATTAGCATCTTCTACACTGGTTTCTTCTGAGGTAGAGGATGTCCGTGAGCAACATCAAGAAGTTAAAGTAGCTGATACAGGTAGAAGAGCTGTGGAGAAAGAAAGTTTCTCATATATCCCTCCTACTCCAGAGTTTGACAAGCAGCCAGCAAAGTCGTCATCAAGTAATCCCATCAATGTTCGGGAAGAAAGTGGGGTGCCTTCTGGTTCAATGGACAGGGAGAGATTTGAAATGAATAATTCGTATGGTGATAATTACAGTCAGAAGTTGCCCAATTATTCTAAAAACTCGGTTGATACAGAAGAGAGAGTACAAAAGGTGTCGCCACCTCGTAGGAAAGTAACCAAGGATGAAAAATCAGAAAGGCTGGGGAACTGGCCGAAAAAAGTTGGTTCGGATCTCTCCACCACAAGCTCTAAGCAGCAAAGTACCGGAATTTATAATGCAAGCAATGCTGGATCCAGACAATCTGAGCCTGAAGTTCCTGATGGGAATATCAATGCCATTCTTGAGGAAGAAGAGGCCCTTATTGCTGCCCATAGAAAAGAAATTGAGGATACAATGGAAATTGTTCGCGAAGAAATGAAACTGTTGGCGGAAGTGGACCAACCGGGGAGCCGCATAGACAACTATGTGACCCAGTTGAATTTTGTTCTTTCCCGCAAGGCAGCCGGTCTGGTTAGCCTTCAAGCCCGGCTTGCAAGATTCCAGCACAGACTAAAAGAACAGGAAATACTAAGTCGGAAAAGAGTACCTCGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000070 GO:0000226 GO:0000278 GO:0000280 GO:0000775 GO:0000776 GO:0000819 GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005694 GO:0005856 GO:0005871 GO:0005874 GO:0005875 GO:0006928 GO:0006996 GO:0007010 GO:0007017 GO:0007018 GO:0007019 GO:0007049 GO:0007059 GO:0007080 GO:0007163 GO:0008017 GO:0008092 GO:0008150 GO:0008608 GO:0009987 GO:0015630 GO:0015631 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022402 GO:0022411 GO:0030951 GO:0030952 GO:0031109 GO:0032984 GO:0032991 GO:0035371 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043624 GO:0043933 GO:0044422 GO:0044424 GO:0044427 GO:0044430 GO:0044446 GO:0044464 GO:0048285 GO:0050000 GO:0050789 GO:0050794 GO:0051010 GO:0051179 GO:0051234 GO:0051261 GO:0051276 GO:0051303 GO:0051310 GO:0051315 GO:0051640 GO:0051641 GO:0051649 GO:0051656 GO:0051983 GO:0065007 GO:0071840 GO:0097435 GO:0098687 GO:0098813 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0140014 GO:1903047 GO:1990752

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Kinesin

Protein Analysis

815

Amino Acids

90.4

Weight (kDa)

5.98

Isoelectric Point (pI)

49.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Microtub_bd	PF16796	204 - 347	1.2e-12	Microtubule binding
Kinesin	PF00225	210 - 537	8.3e-97	Kinesin motor domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002513)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G16630 AT3G16630
fragaria_vesca	FvH4_4g18250 FvH4_4g18250 FvH4_4g18250 FvH4_4g18250 FvH4_4g18250 FvH4_4g18250 FvH4_4g18250 FvH4_4g18250 FvH4_4g18250 FvH4_4g18250 FvH4_4g18250 FvH4_4g18250 FvH4_4g18250 FvH4_4g18250 FvH4_4g18250 FvH4_4g18250 FvH4_4g18250 FvH4_4g18250
malus_domestica	MD13G1167700.v1.1 MD16G1167300.v1.1
prunus_persica	Prupe.1G135100_v2.0.a1 Prupe.1G135100_v2.0.a1 Prupe.1G135100_v2.0.a1
pyrus_communis	pycom13g14330 pycom13g14340 pycom16g14130
rosa_chinensis	RchiOBHm_Chr4g0422421
rosa_laevigata	RLG00000007612
rosa_multiflora	Rmu_ssc0000414.1_g000001 Rmu_ssc0000477.1_g000005
rosa_roxburghii	Rroxscaffold_5G00364520
rosa_rugosa	Rorug04G0180000 Rorug04G0180100
rosa_samantha	Rh4AG239300 Rh4AG239700 Rh4BG242900 Rh4CG254300 Rh4DG238400
rosa_wichuraiana	Rw4G020690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2124
AccB1I	GGYRCC	2 cut(s)	1349, 1879
AccB7I	CCANNNNNTGG	1 cut(s)	331
AccBSI	CCGCTC	2 cut(s)	44, 389
AccI	GTMKAC	1 cut(s)	810
AccII	CGCG	3 cut(s)	35, 1602, 2259
AccIII	TCCGGA	1 cut(s)	364
AclWI	GGATC	9 cut(s)	408, 539, 545, 1186, 1450, 1647, 2088, 2136, 2149
AcoI	YGGCCR	2 cut(s)	7, 2060
AcsI	RAATTY	8 cut(s)	491, 508, 761, 1142, 1516, 1651, 2118, 2329
AcuI	CTGAAG	1 cut(s)	2181
AfaI	GTAC	8 cut(s)	50, 627, 780, 1128, 1174, 1995, 2113, 2436
AfiI	CCNNNNNNNGG	4 cut(s)	217, 331, 1472, 1556
AflII	CTTAAG	1 cut(s)	1421
AflIII	ACRYGT	1 cut(s)	866
AjnI	CCWGG	3 cut(s)	478, 1262, 1440
AleI	CACNNNNGTG	1 cut(s)	1490
Alw21I	GWGCWC	3 cut(s)	232, 590, 1497
Alw26I	GTCTC	2 cut(s)	200, 1215
AlwI	GGATC	9 cut(s)	408, 539, 545, 1186, 1450, 1647, 2088, 2136, 2149
AlwNI	CAGNNNCTG	1 cut(s)	160
Aor13HI	TCCGGA	1 cut(s)	364
AoxI	GGCC	7 cut(s)	7, 77, 95, 126, 162, 2060, 2205
ApoI	RAATTY	8 cut(s)	491, 508, 761, 1142, 1516, 1651, 2118, 2329
ArsI	GACNNNNNNTTYG	4 cut(s)	1071, 1103, 1544, 1576
AseI	ATTAAT	1 cut(s)	266
Asp700I	GAANNNNTTC	1 cut(s)	2253
AspLEI	GCGC	1 cut(s)	68
AspS9I	GGNCC	5 cut(s)	77, 95, 127, 2206, 2287
AsuC2I	CCSGG	4 cut(s)	148, 815, 2295, 2377
AsuHPI	GGTGA	6 cut(s)	116, 125, 159, 389, 459, 1943
AvaII	GGWCC	1 cut(s)	2287
BaeGI	GKGCMC	1 cut(s)	1441
BalI	TGGCCA	1 cut(s)	9
BamHI	GGATCC	1 cut(s)	2141
BanI	GGYRCC	2 cut(s)	1349, 1879
BanII	GRGCYC	1 cut(s)	232
BarI	GAAGNNNNNNTAC	2 cut(s)	1977, 2009
BbsI	GAAGAC	2 cut(s)	945, 1194
Bbv12I	GWGCWC	3 cut(s)	232, 590, 1497
BccI	CCATC	6 cut(s)	344, 472, 562, 1067, 1862, 2165
BciT130I	CCWGG	3 cut(s)	480, 1264, 1442
BciVI	GTATCC	1 cut(s)	2233
BclI	TGATCA	1 cut(s)	1450
BcnI	CCSGG	4 cut(s)	148, 815, 2295, 2377
BcoDI	GTCTC	2 cut(s)	200, 1215
BfaI	CTAG	3 cut(s)	1167, 1290, 1632
BfmI	CTRYAG	2 cut(s)	822, 933
BfoI	RGCGCY	1 cut(s)	69
BfrI	CTTAAG	1 cut(s)	1421
BfuI	GTATCC	1 cut(s)	2233
BglI	GCCNNNNNGGC	1 cut(s)	35
BglII	AGATCT	1 cut(s)	1314
BlpI	GCTNAGC	1 cut(s)	998
BmcAI	AGTACT	1 cut(s)	1174
Bme1390I	CCNGG	7 cut(s)	148, 480, 815, 1264, 1442, 2295, 2377
Bme18I	GGWCC	1 cut(s)	2287
BmgT120I	GGNCC	5 cut(s)	77, 95, 127, 2206, 2287
BmiI	GGNNCC	5 cut(s)	137, 1351, 1881, 2143, 2300
BmrFI	CCNGG	7 cut(s)	148, 480, 815, 1264, 1442, 2295, 2377
BmrI	ACTGGG	1 cut(s)	2317
BmsI	GCATC	7 cut(s)	3, 97, 106, 166, 353, 763, 1697
BmuI	ACTGGG	1 cut(s)	2317
BoxI	GACNNNNGTC	1 cut(s)	192
BpiI	GAAGAC	2 cut(s)	945, 1194
BpmI	CTGGAG	2 cut(s)	122, 1794
Bpu1102I	GCTNAGC	1 cut(s)	998
BpuEI	CTTGAG	1 cut(s)	2213
BpuMI	CCSGG	4 cut(s)	148, 815, 2295, 2377
BsaAI	YACGTR	1 cut(s)	748
BsaBI	GATNNNNATC	1 cut(s)	549
BsaI	GGTCTC	1 cut(s)	1215
BsaJI	CCNNGG	6 cut(s)	33, 177, 1440, 1471, 2028, 2294
BsaWI	WCCGGW	2 cut(s)	364, 2114
Bsc4I	CCNNNNNNNGG	4 cut(s)	217, 331, 1472, 1556
Bse118I	RCCGGY	2 cut(s)	62, 2354
Bse1I	ACTGG	6 cut(s)	139, 965, 1180, 1704, 2063, 2323
Bse3DI	GCAATG	3 cut(s)	31, 1633, 2140
Bse8I	GATNNNNATC	1 cut(s)	549
BseAI	TCCGGA	1 cut(s)	364
BseBI	CCWGG	3 cut(s)	480, 1264, 1442
BseDI	CCNNGG	6 cut(s)	33, 177, 1440, 1471, 2028, 2294
BseGI	GGATG	6 cut(s)	355, 421, 505, 1681, 1726, 2038
BseJI	GATNNNNATC	1 cut(s)	549
BseLI	CCNNNNNNNGG	4 cut(s)	217, 331, 1472, 1556
BseMI	GCAATG	3 cut(s)	31, 1633, 2140
BseMII	CTCAG	5 cut(s)	294, 1054, 1239, 1701, 2145
BseNI	ACTGG	6 cut(s)	139, 965, 1180, 1704, 2063, 2323
BseRI	GAGGAG	4 cut(s)	200, 351, 683, 1211
BseSI	GKGCMC	1 cut(s)	1441
BseYI	CCCAGC	1 cut(s)	2050
BsgI	GTGCAG	1 cut(s)	68
Bsh1236I	CGCG	3 cut(s)	35, 1602, 2259
BshFI	GGCC	7 cut(s)	9, 79, 97, 128, 164, 2062, 2207
BshNI	GGYRCC	2 cut(s)	1349, 1879
BsiHKAI	GWGCWC	3 cut(s)	232, 590, 1497
BsiSI	CCGG	8 cut(s)	63, 147, 365, 814, 2115, 2294, 2355, 2377
BslI	CCNNNNNNNGG	4 cut(s)	217, 331, 1472, 1556
BsmAI	GTCTC	2 cut(s)	200, 1215
BsmBI	CGTCTC	1 cut(s)	200
BsmI	GAATGC	2 cut(s)	1165, 1431
BsnI	GGCC	7 cut(s)	9, 79, 97, 128, 164, 2062, 2207
Bso31I	GGTCTC	1 cut(s)	1215
Bsp1286I	GDGCHC	4 cut(s)	232, 590, 1441, 1497
Bsp13I	TCCGGA	1 cut(s)	364
Bsp1407I	TGTACA	1 cut(s)	1126
Bsp1720I	GCTNAGC	1 cut(s)	998
Bsp68I	TCGCGA	1 cut(s)	2259
BspANI	GGCC	7 cut(s)	9, 79, 97, 128, 164, 2062, 2207
BspCNI	CTCAG	5 cut(s)	295, 1053, 1240, 1702, 2146
BspEI	TCCGGA	1 cut(s)	364
BspFNI	CGCG	3 cut(s)	35, 1602, 2259
BspLI	GGNNCC	5 cut(s)	137, 1351, 1881, 2143, 2300
BspMAI	CTGCAG	1 cut(s)	937
BspPI	GGATC	9 cut(s)	408, 539, 545, 1186, 1450, 1647, 2088, 2136, 2149
BspQI	GCTCTTC	1 cut(s)	1762
BspT107I	GGYRCC	2 cut(s)	1349, 1879
BspTI	CTTAAG	1 cut(s)	1421
BspTNI	GGTCTC	1 cut(s)	1215
BsrBI	CCGCTC	2 cut(s)	44, 389
BsrDI	GCAATG	3 cut(s)	31, 1633, 2140
BsrFI	RCCGGY	2 cut(s)	62, 2354
BsrGI	TGTACA	1 cut(s)	1126
BsrI	ACTGG	6 cut(s)	139, 965, 1180, 1704, 2063, 2323
BssAI	RCCGGY	2 cut(s)	62, 2354
BssECI	CCNNGG	6 cut(s)	33, 177, 1440, 1471, 2028, 2294
BssNAI	GTATAC	1 cut(s)	811
BssT1I	CCWWGG	1 cut(s)	2028
Bst1107I	GTATAC	1 cut(s)	811
Bst2UI	CCWGG	3 cut(s)	480, 1264, 1442
Bst4CI	ACNGT	8 cut(s)	685, 709, 823, 918, 974, 1528, 1943, 2274
Bst6I	CTCTTC	4 cut(s)	237, 1762, 1980, 2196
BstAFI	CTTAAG	1 cut(s)	1421
BstAPI	GCANNNNNTGC	2 cut(s)	535, 2135
BstAUI	TGTACA	1 cut(s)	1126
BstBAI	YACGTR	1 cut(s)	748
BstC8I	GCNNGC	4 cut(s)	1568, 1830, 2131, 2382
BstDEI	CTNAG	9 cut(s)	303, 609, 998, 1040, 1248, 1710, 2100, 2154, 2420
BstDSI	CCRYGG	3 cut(s)	33, 177, 1471
BstENI	CCTNNNNNAGG	1 cut(s)	215
BstF5I	GGATG	6 cut(s)	355, 421, 505, 1681, 1726, 2038
BstFNI	CGCG	3 cut(s)	35, 1602, 2259
BstH2I	RGCGCY	1 cut(s)	69
BstHHI	GCGC	1 cut(s)	68
BstMAI	GTCTC	2 cut(s)	200, 1215
BstNI	CCWGG	3 cut(s)	480, 1264, 1442
BstNSI	RCATGY	2 cut(s)	443, 870
BstPAI	GACNNNNGTC	1 cut(s)	192
BstSCI	CCNGG	7 cut(s)	146, 478, 813, 1262, 1440, 2293, 2375
BstSFI	CTRYAG	2 cut(s)	822, 933
BstSLI	GKGCMC	1 cut(s)	1441
BstUI	CGCG	3 cut(s)	35, 1602, 2259
BstV2I	GAAGAC	2 cut(s)	945, 1194
BstX2I	RGATCY	6 cut(s)	400, 550, 1314, 1455, 2080, 2141
BstYI	RGATCY	6 cut(s)	400, 550, 1314, 1455, 2080, 2141
BstZ17I	GTATAC	1 cut(s)	811
BsuI	GTATCC	1 cut(s)	2233
BsuRI	GGCC	7 cut(s)	9, 79, 97, 128, 164, 2062, 2207
BtgI	CCRYGG	3 cut(s)	33, 177, 1471
BtsCI	GGATG	6 cut(s)	355, 421, 505, 1681, 1726, 2038
BtsIMutI	CAGTG	4 cut(s)	1048, 1245, 1359, 1697
BtuMI	TCGCGA	1 cut(s)	2259
Cac8I	GCNNGC	4 cut(s)	1568, 1830, 2131, 2382
CaiI	CAGNNNCTG	1 cut(s)	160
CfoI	GCGC	1 cut(s)	68
Cfr10I	RCCGGY	2 cut(s)	62, 2354
Cfr13I	GGNCC	5 cut(s)	77, 95, 127, 2206, 2287
Cfr42I	CCGCGG	1 cut(s)	36
Csp6I	GTAC	8 cut(s)	49, 626, 779, 1127, 1173, 1994, 2112, 2435
CspCI	CAANNNNNGTGG	2 cut(s)	166, 201
CviAII	CATG	9 cut(s)	124, 214, 407, 440, 713, 758, 867, 1214, 1563
CviQI	GTAC	8 cut(s)	49, 626, 779, 1127, 1173, 1994, 2112, 2435
DdeI	CTNAG	9 cut(s)	303, 609, 998, 1040, 1248, 1710, 2100, 2154, 2420
EaeI	YGGCCR	2 cut(s)	7, 2060
Eam1104I	CTCTTC	4 cut(s)	237, 1762, 1980, 2196
EarI	CTCTTC	4 cut(s)	237, 1762, 1980, 2196
EciI	GGCGGA	2 cut(s)	133, 2294
Ecl136II	GAGCTC	1 cut(s)	230
Eco130I	CCWWGG	1 cut(s)	2028
Eco24I	GRGCYC	1 cut(s)	232
Eco31I	GGTCTC	1 cut(s)	1215
Eco32I	GATATC	1 cut(s)	1536
Eco47I	GGWCC	1 cut(s)	2287
Eco53kI	GAGCTC	1 cut(s)	230
Eco57I	CTGAAG	1 cut(s)	2181
EcoICRI	GAGCTC	1 cut(s)	230
EcoNI	CCTNNNNNAGG	1 cut(s)	215
EcoO109I	RGGNCCY	2 cut(s)	77, 2206
EcoRII	CCWGG	3 cut(s)	478, 1262, 1440
EcoRV	GATATC	1 cut(s)	1536
EcoT14I	CCWWGG	1 cut(s)	2028
EcoT38I	GRGCYC	1 cut(s)	232
ErhI	CCWWGG	1 cut(s)	2028
Esp3I	CGTCTC	1 cut(s)	200
FaeI	CATG	9 cut(s)	127, 217, 410, 443, 716, 761, 870, 1217, 1566
FalI	AAGNNNNNCTT	6 cut(s)	719, 751, 2193, 2225, 2364, 2396
FatI	CATG	9 cut(s)	123, 213, 406, 439, 712, 757, 866, 1213, 1562
FauI	CCCGC	2 cut(s)	382, 2351
FbaI	TGATCA	1 cut(s)	1450
FblI	GTMKAC	1 cut(s)	810
FokI	GGATG	6 cut(s)	362, 428, 512, 1688, 1733, 2045
FriOI	GRGCYC	1 cut(s)	232
FspBI	CTAG	3 cut(s)	1167, 1290, 1632
GlaI	GCGC	1 cut(s)	67
GsaI	CCCAGC	1 cut(s)	2054
GsuI	CTGGAG	2 cut(s)	122, 1794
HaeII	RGCGCY	1 cut(s)	69
HaeIII	GGCC	7 cut(s)	9, 79, 97, 128, 164, 2062, 2207
HapII	CCGG	8 cut(s)	63, 147, 365, 814, 2115, 2294, 2355, 2377
HhaI	GCGC	1 cut(s)	68
Hin1II	CATG	9 cut(s)	127, 217, 410, 443, 716, 761, 870, 1217, 1566
Hin6I	GCGC	1 cut(s)	66
HinP1I	GCGC	1 cut(s)	66
HinfI	GANTC	7 cut(s)	293, 984, 1199, 1259, 1286, 1502, 2388
HpaII	CCGG	8 cut(s)	63, 147, 365, 814, 2115, 2294, 2355, 2377
HphI	GGTGA	6 cut(s)	116, 125, 159, 389, 459, 1943
Hpy166II	GTNNAC	4 cut(s)	733, 811, 970, 2287
Hpy8I	GTNNAC	4 cut(s)	733, 811, 970, 2287
HpyAV	CCTTC	7 cut(s)	209, 643, 658, 1294, 1382, 1893, 2378
HpyCH4III	ACNGT	8 cut(s)	685, 709, 823, 918, 974, 1528, 1943, 2274
HpyCH4IV	ACGT	1 cut(s)	747
HpyF3I	CTNAG	9 cut(s)	303, 609, 998, 1040, 1248, 1710, 2100, 2154, 2420
HpySE526I	ACGT	1 cut(s)	747
Hsp92II	CATG	9 cut(s)	127, 217, 410, 443, 716, 761, 870, 1217, 1566
HspAI	GCGC	1 cut(s)	66
Kpn2I	TCCGGA	1 cut(s)	364
Ksp22I	TGATCA	1 cut(s)	1450
KspI	CCGCGG	1 cut(s)	36
LguI	GCTCTTC	1 cut(s)	1762
LmnI	GCTCC	8 cut(s)	141, 227, 338, 386, 652, 1391, 1500, 2298
LweI	GCATC	7 cut(s)	3, 97, 106, 166, 353, 763, 1697
MaeI	CTAG	3 cut(s)	1167, 1290, 1632
MaeII	ACGT	1 cut(s)	747
MaeIII	GTNAC	7 cut(s)	679, 918, 954, 974, 1499, 2023, 2317
MbiI	CCGCTC	2 cut(s)	44, 389
MflI	RGATCY	6 cut(s)	400, 550, 1314, 1455, 2080, 2141
MhlI	GDGCHC	4 cut(s)	232, 590, 1441, 1497
MlsI	TGGCCA	1 cut(s)	9
MluNI	TGGCCA	1 cut(s)	9
MlyI	GAGTC	3 cut(s)	302, 1208, 1496
MmeI	TCCRAC	4 cut(s)	378, 1078, 1492, 2405
Mox20I	TGGCCA	1 cut(s)	9
MroI	TCCGGA	1 cut(s)	364
MroXI	GAANNNNTTC	1 cut(s)	2253
MscI	TGGCCA	1 cut(s)	9
MslI	CAYNNNNRTG	1 cut(s)	1490
Msp20I	TGGCCA	1 cut(s)	9
MspA1I	CMGCKG	1 cut(s)	35
MspCI	CTTAAG	1 cut(s)	1421
MspI	CCGG	8 cut(s)	63, 147, 365, 814, 2115, 2294, 2355, 2377
MspR9I	CCNGG	7 cut(s)	148, 480, 815, 1264, 1442, 2295, 2377
Mva1269I	GAATGC	2 cut(s)	1165, 1431
MvaI	CCWGG	3 cut(s)	480, 1264, 1442
MvnI	CGCG	3 cut(s)	35, 1602, 2259
NciI	CCSGG	4 cut(s)	148, 815, 2295, 2377
NlaIII	CATG	9 cut(s)	127, 217, 410, 443, 716, 761, 870, 1217, 1566
NlaIV	GGNNCC	5 cut(s)	137, 1351, 1881, 2143, 2300
NmuCI	GTSAC	2 cut(s)	1499, 2317
NruI	TCGCGA	1 cut(s)	2259
NspI	RCATGY	2 cut(s)	443, 870
OliI	CACNNNNGTG	1 cut(s)	1490
PciI	ACATGT	1 cut(s)	866
PciSI	GCTCTTC	1 cut(s)	1762
PctI	GAATGC	2 cut(s)	1165, 1431
PdmI	GAANNNNTTC	1 cut(s)	2253
PfeI	GAWTC	4 cut(s)	984, 1259, 1286, 2388
PflFI	GACNNNGTC	1 cut(s)	944
PflMI	CCANNNNNTGG	1 cut(s)	331
PleI	GAGTC	3 cut(s)	301, 1207, 1496
PpsI	GAGTC	3 cut(s)	301, 1207, 1496
Ppu21I	YACGTR	1 cut(s)	748
PscI	ACATGT	1 cut(s)	866
PshAI	GACNNNNGTC	1 cut(s)	192
PshBI	ATTAAT	1 cut(s)	266
PsiI	TTATAA	1 cut(s)	2124
Psp124BI	GAGCTC	1 cut(s)	232
Psp6I	CCWGG	3 cut(s)	478, 1262, 1440
PspFI	CCCAGC	1 cut(s)	2050
PspGI	CCWGG	3 cut(s)	478, 1262, 1440
PspN4I	GGNNCC	5 cut(s)	137, 1351, 1881, 2143, 2300
PspPI	GGNCC	5 cut(s)	77, 95, 127, 2206, 2287
PsrI	GAACNNNNNNTAC	4 cut(s)	847, 879, 2400, 2432
PstI	CTGCAG	1 cut(s)	937
PstNI	CAGNNNCTG	1 cut(s)	160
PsuI	RGATCY	6 cut(s)	400, 550, 1314, 1455, 2080, 2141
PsyI	GACNNNGTC	1 cut(s)	944
RruI	TCGCGA	1 cut(s)	2259
RsaI	GTAC	8 cut(s)	50, 627, 780, 1128, 1174, 1995, 2113, 2436
RsaNI	GTAC	8 cut(s)	49, 626, 779, 1127, 1173, 1994, 2112, 2435
RseI	CAYNNNNRTG	1 cut(s)	1490
SacI	GAGCTC	1 cut(s)	232
SacII	CCGCGG	1 cut(s)	36
SapI	GCTCTTC	1 cut(s)	1762
Sau96I	GGNCC	5 cut(s)	77, 95, 127, 2206, 2287
ScaI	AGTACT	1 cut(s)	1174
SchI	GAGTC	3 cut(s)	302, 1208, 1496
ScrFI	CCNGG	7 cut(s)	148, 480, 815, 1264, 1442, 2295, 2377
SduI	GDGCHC	4 cut(s)	232, 590, 1441, 1497
SfaNI	GCATC	7 cut(s)	3, 97, 106, 166, 353, 763, 1697
SfcI	CTRYAG	2 cut(s)	822, 933
Sfr303I	CCGCGG	1 cut(s)	36
SgrAI	CRCCGGYG	1 cut(s)	62
SgrBI	CCGCGG	1 cut(s)	36
SinI	GGWCC	1 cut(s)	2287
SmiMI	CAYNNNNRTG	1 cut(s)	1490
SmlI	CTYRAG	2 cut(s)	1421, 2192
SmoI	CTYRAG	2 cut(s)	1421, 2192
SspMI	CTAG	3 cut(s)	1167, 1290, 1632
SstI	GAGCTC	1 cut(s)	232
StyD4I	CCNGG	7 cut(s)	146, 478, 813, 1262, 1440, 2293, 2375
StyI	CCWWGG	1 cut(s)	2028
TaaI	ACNGT	8 cut(s)	685, 709, 823, 918, 974, 1528, 1943, 2274
TaiI	ACGT	1 cut(s)	750
TaqI	TCGA	1 cut(s)	1181
TaqII	GACCGA	2 cut(s)	1197, 1386
TatI	WGTACW	4 cut(s)	778, 1126, 1172, 1993
TauI	GCSGC	5 cut(s)	32, 35, 38, 74, 2304
TfiI	GAWTC	4 cut(s)	984, 1259, 1286, 2388
TscAI	CASTG	4 cut(s)	1048, 1252, 1366, 1704
TseFI	GTSAC	2 cut(s)	1499, 2317
Tsp45I	GTSAC	2 cut(s)	1499, 2317
TspDTI	ATGAA	9 cut(s)	395, 729, 774, 1299, 1644, 1671, 1931, 2049, 2282
TspGWI	ACGGA	4 cut(s)	676, 1460, 1487, 1715
TspRI	CASTG	4 cut(s)	1048, 1252, 1366, 1704
Tth111I	GACNNNGTC	1 cut(s)	944
Van91I	CCANNNNNTGG	1 cut(s)	331
Vha464I	CTTAAG	1 cut(s)	1421
VpaK11BI	GGWCC	1 cut(s)	2287
VspI	ATTAAT	1 cut(s)	266
XagI	CCTNNNNNAGG	1 cut(s)	215
XapI	RAATTY	8 cut(s)	491, 508, 761, 1142, 1516, 1651, 2118, 2329
XbaI	TCTAGA	2 cut(s)	1166, 1289
XceI	RCATGY	2 cut(s)	443, 870
XcmI	CCANNNNNNNNNTGG	1 cut(s)	727
XmiI	GTMKAC	1 cut(s)	810
XmnI	GAANNNNTTC	1 cut(s)	2253
XspI	CTAG	3 cut(s)	1167, 1290, 1632
ZrmI	AGTACT	1 cut(s)	1174

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.