Rh4AG239300
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4A
OG0002513
Physical Location & Seq
Reverse (-)
54481932 .. 54487641
5710 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4AG239300.1

Sequence Viewer

Length: 2514 bp
ATGGGTGGCCAGATGCAGCAGAGCAATGCCGCCGCGGCAACTGCTCTGTATGACCACCCGGCCGGCAATGCGGGACCCACCAACGATGCCGGCGATGCGGTCATGGCCCGGTGGCTCCAGTCCGCCGGCCTCCAGCATCTGGCCTCACCGTTGGCTTCGACGGCCATCGATAACCGGCTCCTTCCTAACCTTCTCATGCAGGGTTATGGAGCGCAATCTGCTGAAGAGAAACAGAGGCTCTTCAAATTAATGCGCAACCTTAATTTCAATGGGGAGTCCGGTTCGGAGCCATACACACCTACTGCCCAAACATCGGCAGGGGCTGCATCGGAGGGTTTTTACTCTCCGGAGTTCAGGGGGGATTTCGGAGCTGGGCTGTTGGATCTTCATGCTATGGATGACACAGAGCTTCTTTCTGAGCATGTTATGTCCGAACCTTTTGAGCCATCACCCTTTATGCCTGGTGGTATGAAAGCATTTGAAGATGAATTGAATTTGACGAGTGGCGGACAGCAAAGTGTGCTACCTGATCAAGATGCATCAGTTCCATTAGCCCAGAATGAAAAGGAGAGCACAAGGGAAAACAATGTGGCTAAAATTAAAGTTGTGGTACGCAAAAGACCTTTAAACAAGAAGGAACTTTCTCGGAAGGAGGATGATATTGTCACTGTGTATGACAAGTCTTATCTGACAGTTCATGAACCTAAAGTGAAGGTAGACTTGACTGCATATGTGGAGAAGCATGAATTTTGTTTTGATGCGGTTCTGGATGAGCATGTTCGCAATGATGAGGTATATTGGGCTACTGTAGAACCAATTATTCCCCTCATTTTTGAGCGAACAAAGGCTACATGTTTTGCTTATGGTCAGACAGGTAGTGGCAAGACATTCACGATGCAACCGTTACCTATCAGAGCTGCAGAAGATCTTGTCAGATTGTTGCACCAGCCAGTTTACCGTAACCAGAGATTCAAATTATGGCTTAGCTATTTTGAGATCTATGGTGGAAAGCTCTATGATCTTCTCAGCGAGAGGAAGAAACTTTGTATGAGAGAAGATGGACGGCAACAAGTTTGCATTGTTGGACTGCAAGAGTTTGAAGTGTCAGATGTACAAATTGTTAAAGAATATATTGAGAGGGGGAATGCTACTAGAAGTACAGGGTCAACTGGTGCTAATGAGGAGTCTTCTAGGTCACATGCTATTTTACAACTTGTGGTAAAAAAGCACACTGAGGTAAAAGATTCCAGGGGGAGGATCAACATAGATGTAAATGAACCCAGAAGTGGGAAGGTTGTGGGAAAGATCTCTTTTATTGATCTTGCTGGTAGTGAAAGAGGTGCTGACACCACTGATAATGACCGACAAACAAGAATTGAGGGAGCAGAAATCAACAAGAGCCTTTTGGCTCTAAAGGAGTGCATTCGTGCTCTGGACAATGACCAGATCCATATACCTTTTCGAGGAAGCAAACTCACAGAAGTGCTCCGTGACTCTTTCGTCGGAAATTCAAGGACAGTAATGATATCTTGTATATCTCCAAATGCAGGGTCATGCGAGCATACACTCAATACTTTGAGATATGCGGATCGGGTCAAAAGTCTTTCAAAAGGTGGCAATTCTCGAAAGGATCAACCTGTAAATTCATTACCTCCAACTAATAAGGATGTTTCATCATCGTCGTCCACTCTGGCTTCTGCTGGTGTAGAGGATATCCATGAGCAACGCCAAGAAGTTAAAATAACTGATACAGGTAGAAGAACTATGGAAAAAGATAGTTTTTCATATGTCCATGAGCAACGCCAAGAAATTAAACCAACTGATACAGGCAGAAGAGCTGCAGAGAAAGAAAGTTTCTCATATATCCCTACTCCTGATTTTGAGAAGCATCCTGCAAATTCATTGAGTAATCCCATCACTATTCGAGAAGAAAAAGGGACGACTTCTAGTTCACTAGATAGGGAGAGATTTGAAGTGAATAATTCTTATAGTGATTCTTACAGTCAGAAGTTGTCCTATCATTCTCAAAATTCAGTTGATGTAGAAGAAAAAGTGCAACTGGCTGAAAAATCACCACCTCGCCGGAAATTAATTAAGGATGAAAAATCAGAAAAGTTGGGCAACTGGCTGAAGAAAGGAGGTGGTTCTGATCTGTCCACCACCAGCTCTAAGCAGCCTAATACTGGTAATTCTAACACAAGCAATGTTGGATCTAGACAGTCTGAGCCTGAAGTTCCTGATGGGAATATCAATGCAATTCTTGAGGAAGAAGAGGCCCTAATTGCTGCCCACAGAAAAGAAATCGAGGATACAATGGAAATAGTTCGTGAAGAAATGAAACTGTTGGCAGAAGTGGACCGACCAGGGAGCCTCATAGACAACTATGTGACTCAGTTGAGCTTTGTGCTTTCTCGCAAGGCAGCTAGTCTGGTTAGTCTCCAAGCGCGCCTCGCAAGGTTCCAGCATAGACTAAAAGAACAAGAAATTCTAAGTCGGAAAAGAGTACCTCGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000070 GO:0000226 GO:0000278 GO:0000280 GO:0000775 GO:0000776 GO:0000819 GO:0000902 GO:0000904 GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005694 GO:0005737 GO:0005794 GO:0005795 GO:0005856 GO:0005871 GO:0005874 GO:0005875 GO:0005886 GO:0006928 GO:0006996 GO:0007010 GO:0007017 GO:0007018 GO:0007019 GO:0007049 GO:0007059 GO:0007080 GO:0007163 GO:0008017 GO:0008092 GO:0008150 GO:0008608 GO:0009505 GO:0009531 GO:0009653 GO:0009832 GO:0009834 GO:0009888 GO:0009987 GO:0010026 GO:0010087 GO:0010089 GO:0010090 GO:0012505 GO:0015630 GO:0015631 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022402 GO:0022411 GO:0030154 GO:0030312 GO:0030951 GO:0030952 GO:0031109 GO:0031984 GO:0032502 GO:0032984 GO:0032989 GO:0032991 GO:0035371 GO:0042546 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043624 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044427 GO:0044430 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0048285 GO:0048468 GO:0048856 GO:0048869 GO:0050000 GO:0050789 GO:0050794 GO:0051010 GO:0051179 GO:0051234 GO:0051261 GO:0051276 GO:0051303 GO:0051310 GO:0051315 GO:0051640 GO:0051641 GO:0051649 GO:0051656 GO:0051983 GO:0065007 GO:0071554 GO:0071669 GO:0071840 GO:0071944 GO:0090058 GO:0090558 GO:0090626 GO:0097435 GO:0098687 GO:0098791 GO:0098813 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0140014 GO:1903047 GO:1903338 GO:1990752
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Kinesin RRM_1

Protein Analysis

837

Amino Acids

93.29

Weight (kDa)

5.96

Isoelectric Point (pI)

46.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Microtub_bd PF16796 199 - 342 9e-12 Microtubule binding
Kinesin PF00225 205 - 534 2.5e-96 Kinesin motor domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1499
Acc16I TGCGCA 1 cut(s) 254
AccB7I CCANNNNNTGG 1 cut(s) 139
AccI GTMKAC 1 cut(s) 717
AccII CGCG 2 cut(s) 35, 2446
AccIII TCCGGA 1 cut(s) 346
AciI CCGC 9 cut(s) 30, 33, 35, 71, 98, 123, 507, 761, 1586
AclWI GGATC 6 cut(s) 390, 1265, 1441, 1596, 1638, 2218
AcoI YGGCCR 3 cut(s) 7, 60, 162
AcsI RAATTY 7 cut(s) 493, 746, 1507, 1642, 1897, 2029, 2484
AcuI CTGAAG 3 cut(s) 243, 2150, 2250
AfaI GTAC 4 cut(s) 612, 1113, 1159, 2505
AfiI CCNNNNNNNGG 8 cut(s) 139, 313, 1254, 1286, 1287, 1463, 1547, 2183
AflIII ACRYGT 1 cut(s) 851
AgsI TTSAA 9 cut(s) 244, 268, 482, 493, 973, 1100, 1512, 1608, 1973
AjnI CCWGG 3 cut(s) 460, 1247, 2362
AleI CACNNNNGTG 1 cut(s) 1481
AluBI AGCT 9 cut(s) 371, 409, 917, 987, 1012, 1838, 2166, 2400, 2423
AluI AGCT 9 cut(s) 371, 409, 917, 987, 1012, 1838, 2166, 2400, 2423
Alw21I GWGCWC 3 cut(s) 575, 1432, 1488
Alw26I GTCTC 1 cut(s) 2441
AlwI GGATC 6 cut(s) 390, 1265, 1441, 1596, 1638, 2218
AlwNI CAGNNNCTG 2 cut(s) 139, 323
Aor13HI TCCGGA 1 cut(s) 346
AoxI GGCC 7 cut(s) 7, 60, 105, 127, 141, 162, 2274
ApeKI GCWGC 7 cut(s) 16, 323, 917, 1838, 2173, 2285, 2420
ApoI RAATTY 7 cut(s) 493, 746, 1507, 1642, 1897, 2029, 2484
ArsI GACNNNNNNTTYG 2 cut(s) 1535, 1567
AseI ATTAAT 2 cut(s) 248, 2090
Asp700I GAANNNNTTC 1 cut(s) 2322
AspLEI GCGC 4 cut(s) 214, 255, 2446, 2448
AspS9I GGNCC 4 cut(s) 74, 106, 2275, 2356
AsuC2I CCSGG 2 cut(s) 59, 109
AsuHPI GGTGA 3 cut(s) 138, 441, 2064
AvaII GGWCC 2 cut(s) 74, 2356
BalI TGGCCA 1 cut(s) 9
BbsI GAAGAC 1 cut(s) 1179
Bbv12I GWGCWC 3 cut(s) 575, 1432, 1488
BbvI GCAGC 7 cut(s) 28, 310, 904, 1825, 2185, 2272, 2432
BccI CCATC 5 cut(s) 173, 454, 1052, 1922, 2234
BceAI ACGGC 2 cut(s) 177, 1079
BciT130I CCWGG 3 cut(s) 462, 1249, 2364
BciVI GTATCC 1 cut(s) 2302
BclI TGATCA 1 cut(s) 529
BcnI CCSGG 2 cut(s) 59, 109
BcoDI GTCTC 1 cut(s) 2441
BfaI CTAG 6 cut(s) 1152, 1191, 1947, 1955, 2214, 2424
BfmI CTRYAG 3 cut(s) 807, 918, 1839
BfuI GTATCC 1 cut(s) 2302
BglI GCCNNNNNGGC 1 cut(s) 35
BglII AGATCT 3 cut(s) 925, 996, 1305
BlpI GCTNAGC 1 cut(s) 983
Bme1390I CCNGG 5 cut(s) 59, 109, 462, 1249, 2364
Bme18I GGWCC 2 cut(s) 74, 2356
BmgT120I GGNCC 4 cut(s) 74, 106, 2275, 2356
BmiI GGNNCC 7 cut(s) 75, 76, 116, 179, 288, 2369, 2459
BmrFI CCNGG 5 cut(s) 59, 109, 462, 1249, 2364
BpiI GAAGAC 1 cut(s) 1179
BpmI CTGGAG 2 cut(s) 101, 116
Bpu1102I GCTNAGC 1 cut(s) 983
BpuEI CTTGAG 1 cut(s) 2282
BpuMI CCSGG 2 cut(s) 59, 109
Bsa29I ATCGAT 1 cut(s) 168
BsaJI CCNNGG 3 cut(s) 33, 1248, 2363
BsaWI WCCGGW 2 cut(s) 278, 346
Bsc4I CCNNNNNNNGG 8 cut(s) 139, 313, 1254, 1286, 1287, 1463, 1547, 2183
Bse118I RCCGGY 4 cut(s) 62, 89, 125, 174
Bse1I ACTGG 6 cut(s) 118, 950, 1174, 2064, 2129, 2188
Bse3DI GCAATG 4 cut(s) 31, 73, 790, 2209
BseAI TCCGGA 1 cut(s) 346
BseBI CCWGG 3 cut(s) 462, 1249, 2364
BseCI ATCGAT 1 cut(s) 168
BseDI CCNNGG 3 cut(s) 33, 1248, 2363
BseGI GGATG 6 cut(s) 403, 661, 775, 1672, 1888, 2104
BseLI CCNNNNNNNGG 8 cut(s) 139, 313, 1254, 1286, 1287, 1463, 1547, 2183
BseMI GCAATG 4 cut(s) 31, 73, 790, 2209
BseMII CTCAG 5 cut(s) 408, 1039, 1224, 2214, 2405
BseNI ACTGG 6 cut(s) 118, 950, 1174, 2064, 2129, 2188
BsePI GCGCGC 1 cut(s) 2444
BseRI GAGGAG 1 cut(s) 1196
BseX3I CGGCCG 1 cut(s) 60
BseXI GCAGC 7 cut(s) 28, 310, 904, 1825, 2185, 2272, 2432
BseYI CCCAGC 1 cut(s) 371
Bsh1236I CGCG 2 cut(s) 35, 2446
Bsh1285I CGRYCG 1 cut(s) 63
BshFI GGCC 7 cut(s) 9, 62, 107, 129, 143, 164, 2276
BshVI ATCGAT 1 cut(s) 168
BsiEI CGRYCG 1 cut(s) 63
BsiHKAI GWGCWC 3 cut(s) 575, 1432, 1488
BsiSI CCGG 9 cut(s) 59, 63, 90, 109, 126, 175, 279, 347, 2083
BslFI GGGAC 2 cut(s) 87, 1951
BslI CCNNNNNNNGG 8 cut(s) 139, 313, 1254, 1286, 1287, 1463, 1547, 2183
BsmAI GTCTC 1 cut(s) 2441
BsmFI GGGAC 2 cut(s) 87, 1951
BsmI GAATGC 2 cut(s) 1150, 1422
BsnI GGCC 7 cut(s) 9, 62, 107, 129, 143, 164, 2276
Bsp1286I GDGCHC 3 cut(s) 575, 1432, 1488
Bsp13I TCCGGA 1 cut(s) 346
Bsp1407I TGTACA 1 cut(s) 1111
Bsp1720I GCTNAGC 1 cut(s) 983
BspACI CCGC 9 cut(s) 30, 33, 35, 71, 98, 123, 507, 761, 1586
BspANI GGCC 7 cut(s) 9, 62, 107, 129, 143, 164, 2276
BspCNI CTCAG 5 cut(s) 409, 1038, 1225, 2215, 2404
BspDI ATCGAT 1 cut(s) 168
BspEI TCCGGA 1 cut(s) 346
BspFNI CGCG 2 cut(s) 35, 2446
BspHI TCATGA 1 cut(s) 697
BspLI GGNNCC 7 cut(s) 75, 76, 116, 179, 288, 2369, 2459
BspMAI CTGCAG 2 cut(s) 922, 1843
BspPI GGATC 6 cut(s) 390, 1265, 1441, 1596, 1638, 2218
BspQI GCTCTTC 2 cut(s) 245, 1828
BsrDI GCAATG 4 cut(s) 31, 73, 790, 2209
BsrFI RCCGGY 4 cut(s) 62, 89, 125, 174
BsrGI TGTACA 1 cut(s) 1111
BsrI ACTGG 6 cut(s) 118, 950, 1174, 2064, 2129, 2188
BssAI RCCGGY 4 cut(s) 62, 89, 125, 174
BssECI CCNNGG 3 cut(s) 33, 1248, 2363
BssHII GCGCGC 1 cut(s) 2444
Bst2UI CCWGG 3 cut(s) 462, 1249, 2364
Bst6I CTCTTC 4 cut(s) 219, 245, 1828, 2265
BstAPI GCANNNNNTGC 2 cut(s) 323, 520
BstAUI TGTACA 1 cut(s) 1111
BstC8I GCNNGC 5 cut(s) 64, 91, 127, 1559, 2446
BstDEI CTNAG 8 cut(s) 417, 983, 1025, 1233, 2169, 2223, 2391, 2489
BstDSI CCRYGG 1 cut(s) 33
BstENI CCTNNNNNAGG 1 cut(s) 1461
BstF5I GGATG 6 cut(s) 403, 661, 775, 1672, 1888, 2104
BstFNI CGCG 2 cut(s) 35, 2446
BstHHI GCGC 4 cut(s) 214, 255, 2446, 2448
BstMAI GTCTC 1 cut(s) 2441
BstMCI CGRYCG 1 cut(s) 63
BstNI CCWGG 3 cut(s) 462, 1249, 2364
BstNSI RCATGY 4 cut(s) 425, 779, 855, 1202
BstSCI CCNGG 5 cut(s) 57, 107, 460, 1247, 2362
BstSFI CTRYAG 3 cut(s) 807, 918, 1839
BstUI CGCG 2 cut(s) 35, 2446
BstV1I GCAGC 7 cut(s) 28, 310, 904, 1825, 2185, 2272, 2432
BstV2I GAAGAC 1 cut(s) 1179
BstX2I RGATCY 6 cut(s) 382, 925, 996, 1305, 1446, 2210
BstYI RGATCY 6 cut(s) 382, 925, 996, 1305, 1446, 2210
BstZI CGGCCG 1 cut(s) 60
Bsu15I ATCGAT 1 cut(s) 168
BsuI GTATCC 1 cut(s) 2302
BsuRI GGCC 7 cut(s) 9, 62, 107, 129, 143, 164, 2276
BsuTUI ATCGAT 1 cut(s) 168
BtgI CCRYGG 1 cut(s) 33
BtgZI GCGATG 1 cut(s) 108
BtsCI GGATG 6 cut(s) 403, 661, 775, 1672, 1888, 2104
BtsIMutI CAGTG 3 cut(s) 666, 1230, 1350
Cac8I GCNNGC 5 cut(s) 64, 91, 127, 1559, 2446
CaiI CAGNNNCTG 2 cut(s) 139, 323
CciI TCATGA 1 cut(s) 697
CfoI GCGC 4 cut(s) 214, 255, 2446, 2448
Cfr10I RCCGGY 4 cut(s) 62, 89, 125, 174
Cfr13I GGNCC 4 cut(s) 74, 106, 2275, 2356
Cfr42I CCGCGG 1 cut(s) 36
ClaI ATCGAT 1 cut(s) 168
Csp6I GTAC 4 cut(s) 611, 1112, 1158, 2504
CviQI GTAC 4 cut(s) 611, 1112, 1158, 2504
DdeI CTNAG 8 cut(s) 417, 983, 1025, 1233, 2169, 2223, 2391, 2489
DraI TTTAAA 1 cut(s) 627
DrdI GACNNNNNNGTC 1 cut(s) 1499
DseDI GACNNNNNNGTC 1 cut(s) 1499
EaeI YGGCCR 3 cut(s) 7, 60, 162
EagI CGGCCG 1 cut(s) 60
Eam1104I CTCTTC 4 cut(s) 219, 245, 1828, 2265
EarI CTCTTC 4 cut(s) 219, 245, 1828, 2265
EciI GGCGGA 2 cut(s) 112, 522
EclXI CGGCCG 1 cut(s) 60
Eco32I GATATC 2 cut(s) 1527, 1714
Eco47I GGWCC 2 cut(s) 74, 2356
Eco52I CGGCCG 1 cut(s) 60
Eco57I CTGAAG 3 cut(s) 243, 2150, 2250
EcoNI CCTNNNNNAGG 1 cut(s) 1461
EcoO109I RGGNCCY 2 cut(s) 74, 2275
EcoRII CCWGG 3 cut(s) 460, 1247, 2362
EcoRV GATATC 2 cut(s) 1527, 1714
EcoT22I ATGCAT 1 cut(s) 541
FalI AAGNNNNNCTT 2 cut(s) 704, 736
FaqI GGGAC 2 cut(s) 87, 1951
FauI CCCGC 1 cut(s) 64
FauNDI CATATG 2 cut(s) 730, 1786
FbaI TGATCA 1 cut(s) 529
FblI GTMKAC 1 cut(s) 717
FokI GGATG 6 cut(s) 410, 668, 782, 1679, 1875, 2111
FspBI CTAG 6 cut(s) 1152, 1191, 1947, 1955, 2214, 2424
FspI TGCGCA 1 cut(s) 254
GlaI GCGC 4 cut(s) 213, 254, 2445, 2447
GsaI CCCAGC 1 cut(s) 375
GsuI CTGGAG 2 cut(s) 101, 116
HaeIII GGCC 7 cut(s) 9, 62, 107, 129, 143, 164, 2276
HapII CCGG 9 cut(s) 59, 63, 90, 109, 126, 175, 279, 347, 2083
HhaI GCGC 4 cut(s) 214, 255, 2446, 2448
Hin6I GCGC 4 cut(s) 212, 253, 2444, 2446
HinP1I GCGC 4 cut(s) 212, 253, 2444, 2446
HincII GTYRAC 1 cut(s) 1167
HindII GTYRAC 1 cut(s) 1167
HinfI GANTC 7 cut(s) 275, 969, 1184, 1244, 1493, 1994, 2389
HpaII CCGG 9 cut(s) 59, 63, 90, 109, 126, 175, 279, 347, 2083
HphI GGTGA 3 cut(s) 138, 441, 2064
Hpy166II GTNNAC 7 cut(s) 718, 955, 1167, 1686, 1952, 2157, 2356
Hpy8I GTNNAC 7 cut(s) 718, 955, 1167, 1686, 1952, 2157, 2356
Hpy99I CGWCG 3 cut(s) 163, 1505, 1684
HpyAV CCTTC 6 cut(s) 191, 200, 628, 643, 706, 1285
HpyF3I CTNAG 8 cut(s) 417, 983, 1025, 1233, 2169, 2223, 2391, 2489
HspAI GCGC 4 cut(s) 212, 253, 2444, 2446
KflI GGGWCCC 1 cut(s) 74
Kpn2I TCCGGA 1 cut(s) 346
KroI GCCGGC 3 cut(s) 62, 89, 125
KroNI GCCGGC 3 cut(s) 64, 91, 127
Ksp22I TGATCA 1 cut(s) 529
KspI CCGCGG 1 cut(s) 36
LguI GCTCTTC 2 cut(s) 245, 1828
LmnI GCTCC 8 cut(s) 120, 183, 209, 286, 368, 1382, 1491, 2367
Lsp1109I GCAGC 7 cut(s) 28, 310, 904, 1825, 2185, 2272, 2432
MaeI CTAG 6 cut(s) 1152, 1191, 1947, 1955, 2214, 2424
MaeIII GTNAC 6 cut(s) 664, 903, 959, 1194, 1490, 2386
MflI RGATCY 6 cut(s) 382, 925, 996, 1305, 1446, 2210
MhlI GDGCHC 3 cut(s) 575, 1432, 1488
MlsI TGGCCA 1 cut(s) 9
MluNI TGGCCA 1 cut(s) 9
MlyI GAGTC 4 cut(s) 284, 1193, 1487, 2383
MmeI TCCRAC 6 cut(s) 360, 1063, 1483, 1679, 2188, 2474
Mox20I TGGCCA 1 cut(s) 9
Mph1103I ATGCAT 1 cut(s) 541
MroI TCCGGA 1 cut(s) 346
MroNI GCCGGC 3 cut(s) 62, 89, 125
MroXI GAANNNNTTC 1 cut(s) 2322
MscI TGGCCA 1 cut(s) 9
MslI CAYNNNNRTG 1 cut(s) 1481
Msp20I TGGCCA 1 cut(s) 9
MspA1I CMGCKG 1 cut(s) 35
MspI CCGG 9 cut(s) 59, 63, 90, 109, 126, 175, 279, 347, 2083
MspR9I CCNGG 5 cut(s) 59, 109, 462, 1249, 2364
Mva1269I GAATGC 2 cut(s) 1150, 1422
MvaI CCWGG 3 cut(s) 462, 1249, 2364
MvnI CGCG 2 cut(s) 35, 2446
NaeI GCCGGC 3 cut(s) 64, 91, 127
NciI CCSGG 2 cut(s) 59, 109
NdeI CATATG 2 cut(s) 730, 1786
NgoMIV GCCGGC 3 cut(s) 62, 89, 125
NlaIV GGNNCC 7 cut(s) 75, 76, 116, 179, 288, 2369, 2459
NmuCI GTSAC 4 cut(s) 664, 1194, 1490, 2386
NsbI TGCGCA 1 cut(s) 254
NsiI ATGCAT 1 cut(s) 541
NspI RCATGY 4 cut(s) 425, 779, 855, 1202
OliI CACNNNNGTG 1 cut(s) 1481
PacI TTAATTAA 1 cut(s) 2094
PagI TCATGA 1 cut(s) 697
PauI GCGCGC 1 cut(s) 2444
PciI ACATGT 1 cut(s) 851
PciSI GCTCTTC 2 cut(s) 245, 1828
PcsI WCGNNNNNNNCGW 2 cut(s) 90, 899
PctI GAATGC 2 cut(s) 1150, 1422
PdiI GCCGGC 3 cut(s) 64, 91, 127
PdmI GAANNNNTTC 1 cut(s) 2322
PfeI GAWTC 3 cut(s) 969, 1244, 1994
PflMI CCANNNNNTGG 1 cut(s) 139
PleI GAGTC 4 cut(s) 283, 1192, 1487, 2383
PpsI GAGTC 4 cut(s) 283, 1192, 1487, 2383
PpuMI RGGWCCY 1 cut(s) 74
PscI ACATGT 1 cut(s) 851
PshBI ATTAAT 2 cut(s) 248, 2090
Psp5II RGGWCCY 1 cut(s) 74
Psp6I CCWGG 3 cut(s) 460, 1247, 2362
PspFI CCCAGC 1 cut(s) 371
PspGI CCWGG 3 cut(s) 460, 1247, 2362
PspN4I GGNNCC 7 cut(s) 75, 76, 116, 179, 288, 2369, 2459
PspPI GGNCC 4 cut(s) 74, 106, 2275, 2356
PspPPI RGGWCCY 1 cut(s) 74
PsrI GAACNNNNNNTAC 2 cut(s) 832, 864
PstI CTGCAG 2 cut(s) 922, 1843
PstNI CAGNNNCTG 2 cut(s) 139, 323
PsuI RGATCY 6 cut(s) 382, 925, 996, 1305, 1446, 2210
PteI GCGCGC 1 cut(s) 2444
RsaI GTAC 4 cut(s) 612, 1113, 1159, 2505
RsaNI GTAC 4 cut(s) 611, 1112, 1158, 2504
RseI CAYNNNNRTG 1 cut(s) 1481
SacII CCGCGG 1 cut(s) 36
SapI GCTCTTC 2 cut(s) 245, 1828
Sau96I GGNCC 4 cut(s) 74, 106, 2275, 2356
SchI GAGTC 4 cut(s) 284, 1193, 1487, 2383
ScrFI CCNGG 5 cut(s) 59, 109, 462, 1249, 2364
SduI GDGCHC 3 cut(s) 575, 1432, 1488
SfcI CTRYAG 3 cut(s) 807, 918, 1839
Sfr303I CCGCGG 1 cut(s) 36
SgrBI CCGCGG 1 cut(s) 36
SinI GGWCC 2 cut(s) 74, 2356
SmiMI CAYNNNNRTG 1 cut(s) 1481
SmlI CTYRAG 1 cut(s) 2261
SmoI CTYRAG 1 cut(s) 2261
SsiI CCGC 9 cut(s) 30, 33, 35, 71, 98, 123, 507, 761, 1586
SspMI CTAG 6 cut(s) 1152, 1191, 1947, 1955, 2214, 2424
StyD4I CCNGG 5 cut(s) 57, 107, 460, 1247, 2362
TaqI TCGA 6 cut(s) 158, 168, 1462, 1624, 1924, 2304
TaqII GACCGA 2 cut(s) 1377, 2373
TatI WGTACW 2 cut(s) 1111, 1157
TauI GCSGC 3 cut(s) 32, 35, 38
TfiI GAWTC 3 cut(s) 969, 1244, 1994
TscAI CASTG 3 cut(s) 673, 1237, 1357
TseFI GTSAC 4 cut(s) 664, 1194, 1490, 2386
TseI GCWGC 7 cut(s) 16, 323, 917, 1838, 2173, 2285, 2420
Tsp45I GTSAC 4 cut(s) 664, 1194, 1490, 2386
TspGWI ACGGA 1 cut(s) 1478
TspRI CASTG 3 cut(s) 673, 1237, 1357
Van91I CCANNNNNTGG 1 cut(s) 139
VpaK11BI GGWCC 2 cut(s) 74, 2356
VspI ATTAAT 2 cut(s) 248, 2090
XagI CCTNNNNNAGG 1 cut(s) 1461
XapI RAATTY 7 cut(s) 493, 746, 1507, 1642, 1897, 2029, 2484
XbaI TCTAGA 1 cut(s) 2213
XceI RCATGY 4 cut(s) 425, 779, 855, 1202
XmiI GTMKAC 1 cut(s) 717
XmnI GAANNNNTTC 1 cut(s) 2322
XspI CTAG 6 cut(s) 1152, 1191, 1947, 1955, 2214, 2424
Zsp2I ATGCAT 1 cut(s) 541
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.