Rmu_ssc0000414.1_g000001
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000414.1
OG0002513
Physical Location & Seq
Reverse (-)
553 .. 3590
3038 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000414.1_g000001.1.cds

Sequence Viewer

Length: 1614 bp
atgcaaccgttacctatcagagctgcagaagatcttgtcagattgttgcaccagccagtttaccgtaaccagagattcaaattatggcttagctattttgagatctatggtggaaagctctatgatcttctcagcgagaggaagaaactttgtatgagagaagatggacggcaacaagtttgcattgttggactgcaagagtttgaagtgtcagatgtacaaattgttaaagaatatattgagagggggaatgctactagaagtacagggtcaactggtgctaatgaggagtcttctaggtcacatgctattttacaacttgtggtaaaaaagcacactgaggtaaaagattccagggggcggatcaacatagatgtaaatgaacccagaagtgggaaggttgtgggaaagatctcttttattgatcttgctggtagtgaaagaggtgctgacaccactgataatgaccgacaaacaagaattgagggagcagaaatcaacaagagccttttggctctaaaggagtgcattcgtgctctggacaatgaccagatccacataccttttcgaggaagcaaactcacagaagtgctccgtgactctttcgtcggaaattcaaggacagtaatgatatcttgtatatctccaaatgcagggtcatgcgagcatacactcaatactttgagatatgcggatcgggtcaaaagtctttcaaaaggtggcaattctcgaaaggatcaacctgtaaattcattacctccaactaataaggatgtttcatcatcgtcgtccactctggcttctgctggtgtagaggatatccatgagcaacgccaagaagttaaaataactgatacaggtagaagaactatggaaaaagatagtttttcatatgtccatgagcaacgccaagaaattaaaccaactgatacaggcagaagagctgcagagaaagaaagtatctcatatatccctactcctgattttgagaagcatcctgcaaattcattgagtaatcccatcactattcgagaagaaaaagggatgacttctagttcactagatagggagagatttgaagtgaataattcttatagtgattcttacagtcagaagttgtcctatcattctcaaaattcagttgatgtagaagaaaaagtgcaaaaggtatcgccacctcgccggaaattaattaaggatgaaaaatcagaaaagttgggcaactggctgaagaaaggaggtggttctgatctgtccaccaccagctctaagcagcctaatactggtaattctaacacaagcaatgttggatctagacagtctgagcctgaagttcctgatgggaatatcaatgcaattcttgaggaagaagaggccctaattgctgcccacagaaaagaaatcgaggatacaatggaaatagttcgtgaagaaatgaaactgttggcagaagtggaccgaccagggagcctcatagacaactacgtgactcagttgagctttgtgctttctcgcaaggcagctagtttggttagtctccaagcgcgccttgcaaggttccagcatagactaaaagaacaagaaattctaagtcggaaaagagtacctcgttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000070 GO:0000226 GO:0000278 GO:0000280 GO:0000775 GO:0000776 GO:0000819 GO:0000902 GO:0000904 GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005694 GO:0005737 GO:0005794 GO:0005795 GO:0005856 GO:0005871 GO:0005874 GO:0005875 GO:0005886 GO:0006928 GO:0006996 GO:0007010 GO:0007017 GO:0007018 GO:0007019 GO:0007049 GO:0007059 GO:0007080 GO:0007163 GO:0008017 GO:0008092 GO:0008150 GO:0008608 GO:0009505 GO:0009531 GO:0009653 GO:0009832 GO:0009834 GO:0009888 GO:0009987 GO:0010026 GO:0010087 GO:0010089 GO:0010090 GO:0012505 GO:0015630 GO:0015631 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022402 GO:0022411 GO:0030154 GO:0030312 GO:0030951 GO:0030952 GO:0031109 GO:0031984 GO:0032502 GO:0032984 GO:0032989 GO:0032991 GO:0035371 GO:0042546 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043624 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044427 GO:0044430 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0048285 GO:0048468 GO:0048856 GO:0048869 GO:0050000 GO:0050789 GO:0050794 GO:0051010 GO:0051179 GO:0051234 GO:0051261 GO:0051276 GO:0051303 GO:0051310 GO:0051315 GO:0051640 GO:0051641 GO:0051649 GO:0051656 GO:0051983 GO:0065007 GO:0071554 GO:0071669 GO:0071840 GO:0071944 GO:0090058 GO:0090558 GO:0090626 GO:0097435 GO:0098687 GO:0098791 GO:0098813 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0140014 GO:1903047 GO:1903338 GO:1990752
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Kinesin RRM_1

Protein Analysis

537

Amino Acids

60.45

Weight (kDa)

8.55

Isoelectric Point (pI)

48.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 605
AccII CGCG 1 cut(s) 1546
AciI CCGC 2 cut(s) 361, 692
AclWI GGATC 5 cut(s) 371, 547, 702, 744, 1318
AcsI RAATTY 5 cut(s) 613, 748, 1003, 1135, 1584
AcuI CTGAAG 2 cut(s) 1250, 1350
AfaI GTAC 3 cut(s) 219, 265, 1605
AfiI CCNNNNNNNGG 6 cut(s) 360, 392, 393, 569, 653, 1283
AgsI TTSAA 5 cut(s) 79, 206, 618, 714, 1079
AjnI CCWGG 2 cut(s) 353, 1462
AleI CACNNNNGTG 1 cut(s) 587
AluBI AGCT 7 cut(s) 23, 93, 118, 944, 1266, 1500, 1523
AluI AGCT 7 cut(s) 23, 93, 118, 944, 1266, 1500, 1523
Alw21I GWGCWC 2 cut(s) 538, 594
Alw26I GTCTC 1 cut(s) 1541
AlwI GGATC 5 cut(s) 371, 547, 702, 744, 1318
AoxI GGCC 1 cut(s) 1374
ApeKI GCWGC 5 cut(s) 23, 944, 1273, 1385, 1520
ApoI RAATTY 5 cut(s) 613, 748, 1003, 1135, 1584
ArsI GACNNNNNNTTYG 2 cut(s) 641, 673
AseI ATTAAT 1 cut(s) 1190
Asp700I GAANNNNTTC 1 cut(s) 1422
AspLEI GCGC 2 cut(s) 1546, 1548
AspS9I GGNCC 2 cut(s) 1375, 1456
AvaII GGWCC 1 cut(s) 1456
BbsI GAAGAC 1 cut(s) 285
Bbv12I GWGCWC 2 cut(s) 538, 594
BbvI GCAGC 5 cut(s) 10, 931, 1285, 1372, 1532
BccI CCATC 3 cut(s) 158, 1028, 1334
BceAI ACGGC 1 cut(s) 185
BciT130I CCWGG 2 cut(s) 355, 1464
BciVI GTATCC 1 cut(s) 1402
BcoDI GTCTC 1 cut(s) 1541
BfaI CTAG 6 cut(s) 258, 297, 1053, 1061, 1314, 1524
BfmI CTRYAG 2 cut(s) 24, 945
BfuI GTATCC 1 cut(s) 1402
BglII AGATCT 3 cut(s) 31, 102, 411
BisI GCNGC 5 cut(s) 24, 945, 1274, 1386, 1521
BlpI GCTNAGC 1 cut(s) 89
BlsI GCNGC 5 cut(s) 25, 946, 1275, 1387, 1522
Bme1390I CCNGG 2 cut(s) 355, 1464
Bme18I GGWCC 1 cut(s) 1456
BmgT120I GGNCC 2 cut(s) 1375, 1456
BmiI GGNNCC 2 cut(s) 1469, 1559
BmrFI CCNGG 2 cut(s) 355, 1464
BmsI GCATC 1 cut(s) 1003
BpiI GAAGAC 1 cut(s) 285
Bpu1102I GCTNAGC 1 cut(s) 89
BpuEI CTTGAG 1 cut(s) 1382
BsaAI YACGTR 1 cut(s) 1486
BsaJI CCNNGG 2 cut(s) 354, 1463
Bsc4I CCNNNNNNNGG 6 cut(s) 360, 392, 393, 569, 653, 1283
Bse1I ACTGG 4 cut(s) 56, 280, 1229, 1288
Bse3DI GCAATG 1 cut(s) 1309
BseBI CCWGG 2 cut(s) 355, 1464
BseDI CCNNGG 2 cut(s) 354, 1463
BseGI GGATG 4 cut(s) 778, 994, 1050, 1204
BseLI CCNNNNNNNGG 6 cut(s) 360, 392, 393, 569, 653, 1283
BseMI GCAATG 1 cut(s) 1309
BseMII CTCAG 4 cut(s) 145, 330, 1314, 1505
BseNI ACTGG 4 cut(s) 56, 280, 1229, 1288
BsePI GCGCGC 1 cut(s) 1544
BseRI GAGGAG 1 cut(s) 302
BseXI GCAGC 5 cut(s) 10, 931, 1285, 1372, 1532
Bsh1236I CGCG 1 cut(s) 1546
BshFI GGCC 1 cut(s) 1376
BsiHKAI GWGCWC 2 cut(s) 538, 594
BsiSI CCGG 1 cut(s) 1183
BslI CCNNNNNNNGG 6 cut(s) 360, 392, 393, 569, 653, 1283
BsmAI GTCTC 1 cut(s) 1541
BsmI GAATGC 2 cut(s) 256, 528
BsnI GGCC 1 cut(s) 1376
Bsp1286I GDGCHC 2 cut(s) 538, 594
Bsp1407I TGTACA 1 cut(s) 217
Bsp1720I GCTNAGC 1 cut(s) 89
BspACI CCGC 2 cut(s) 361, 692
BspANI GGCC 1 cut(s) 1376
BspCNI CTCAG 4 cut(s) 144, 331, 1315, 1504
BspFNI CGCG 1 cut(s) 1546
BspLI GGNNCC 2 cut(s) 1469, 1559
BspMAI CTGCAG 2 cut(s) 28, 949
BspPI GGATC 5 cut(s) 371, 547, 702, 744, 1318
BspQI GCTCTTC 1 cut(s) 934
BsrDI GCAATG 1 cut(s) 1309
BsrGI TGTACA 1 cut(s) 217
BsrI ACTGG 4 cut(s) 56, 280, 1229, 1288
BssECI CCNNGG 2 cut(s) 354, 1463
BssHII GCGCGC 1 cut(s) 1544
Bst2UI CCWGG 2 cut(s) 355, 1464
Bst4CI ACNGT 6 cut(s) 9, 65, 625, 1109, 1320, 1443
Bst6I CTCTTC 2 cut(s) 934, 1365
BstAUI TGTACA 1 cut(s) 217
BstBAI YACGTR 1 cut(s) 1486
BstC8I GCNNGC 2 cut(s) 665, 1546
BstDEI CTNAG 7 cut(s) 89, 131, 339, 1269, 1323, 1491, 1589
BstENI CCTNNNNNAGG 1 cut(s) 567
BstF5I GGATG 4 cut(s) 778, 994, 1050, 1204
BstFNI CGCG 1 cut(s) 1546
BstHHI GCGC 2 cut(s) 1546, 1548
BstMAI GTCTC 1 cut(s) 1541
BstMWI GCNNNNNNNGC 2 cut(s) 1382, 1550
BstNI CCWGG 2 cut(s) 355, 1464
BstNSI RCATGY 1 cut(s) 308
BstSCI CCNGG 2 cut(s) 353, 1462
BstSFI CTRYAG 2 cut(s) 24, 945
BstUI CGCG 1 cut(s) 1546
BstV1I GCAGC 5 cut(s) 10, 931, 1285, 1372, 1532
BstV2I GAAGAC 1 cut(s) 285
BstX2I RGATCY 5 cut(s) 31, 102, 411, 552, 1310
BstYI RGATCY 5 cut(s) 31, 102, 411, 552, 1310
BsuI GTATCC 1 cut(s) 1402
BsuRI GGCC 1 cut(s) 1376
BtsCI GGATG 4 cut(s) 778, 994, 1050, 1204
BtsIMutI CAGTG 2 cut(s) 336, 456
Cac8I GCNNGC 2 cut(s) 665, 1546
CfoI GCGC 2 cut(s) 1546, 1548
Cfr13I GGNCC 2 cut(s) 1375, 1456
Csp6I GTAC 3 cut(s) 218, 264, 1604
CviAII CATG 4 cut(s) 305, 660, 824, 899
CviQI GTAC 3 cut(s) 218, 264, 1604
DdeI CTNAG 7 cut(s) 89, 131, 339, 1269, 1323, 1491, 1589
DrdI GACNNNNNNGTC 1 cut(s) 605
DseDI GACNNNNNNGTC 1 cut(s) 605
Eam1104I CTCTTC 2 cut(s) 934, 1365
EarI CTCTTC 2 cut(s) 934, 1365
EciI GGCGGA 1 cut(s) 376
Eco32I GATATC 2 cut(s) 633, 820
Eco47I GGWCC 1 cut(s) 1456
Eco57I CTGAAG 2 cut(s) 1250, 1350
EcoNI CCTNNNNNAGG 1 cut(s) 567
EcoO109I RGGNCCY 1 cut(s) 1375
EcoRII CCWGG 2 cut(s) 353, 1462
EcoRV GATATC 2 cut(s) 633, 820
FaeI CATG 4 cut(s) 308, 663, 827, 902
FalI AAGNNNNNCTT 2 cut(s) 1533, 1565
FatI CATG 4 cut(s) 304, 659, 823, 898
FauNDI CATATG 1 cut(s) 892
Fnu4HI GCNGC 5 cut(s) 24, 945, 1274, 1386, 1521
FokI GGATG 4 cut(s) 785, 981, 1057, 1211
Fsp4HI GCNGC 5 cut(s) 24, 945, 1274, 1386, 1521
FspBI CTAG 6 cut(s) 258, 297, 1053, 1061, 1314, 1524
GlaI GCGC 2 cut(s) 1545, 1547
GluI GCNGC 5 cut(s) 24, 945, 1274, 1386, 1521
HaeIII GGCC 1 cut(s) 1376
HapII CCGG 1 cut(s) 1183
HhaI GCGC 2 cut(s) 1546, 1548
Hin1II CATG 4 cut(s) 308, 663, 827, 902
Hin6I GCGC 2 cut(s) 1544, 1546
HinP1I GCGC 2 cut(s) 1544, 1546
HincII GTYRAC 1 cut(s) 273
HindII GTYRAC 1 cut(s) 273
HinfI GANTC 6 cut(s) 75, 290, 350, 599, 1100, 1489
HpaII CCGG 1 cut(s) 1183
Hpy166II GTNNAC 6 cut(s) 61, 273, 792, 1058, 1257, 1456
Hpy188I TCNGA 9 cut(s) 20, 41, 214, 611, 1113, 1210, 1249, 1324, 1596
Hpy188III TCNNGA 8 cut(s) 539, 729, 980, 1031, 1314, 1337, 1361, 1427
Hpy8I GTNNAC 6 cut(s) 61, 273, 792, 1058, 1257, 1456
Hpy99I CGWCG 2 cut(s) 611, 790
HpyAV CCTTC 1 cut(s) 391
HpyCH4III ACNGT 6 cut(s) 9, 65, 625, 1109, 1320, 1443
HpyCH4IV ACGT 1 cut(s) 1485
HpyF10VI GCNNNNNNNGC 2 cut(s) 1382, 1550
HpyF3I CTNAG 7 cut(s) 89, 131, 339, 1269, 1323, 1491, 1589
HpySE526I ACGT 1 cut(s) 1485
Hsp92II CATG 4 cut(s) 308, 663, 827, 902
HspAI GCGC 2 cut(s) 1544, 1546
LguI GCTCTTC 1 cut(s) 934
LmnI GCTCC 3 cut(s) 488, 597, 1467
Lsp1109I GCAGC 5 cut(s) 10, 931, 1285, 1372, 1532
LweI GCATC 1 cut(s) 1003
MaeI CTAG 6 cut(s) 258, 297, 1053, 1061, 1314, 1524
MaeII ACGT 1 cut(s) 1485
MaeIII GTNAC 5 cut(s) 9, 65, 300, 596, 1486
MflI RGATCY 5 cut(s) 31, 102, 411, 552, 1310
MhlI GDGCHC 2 cut(s) 538, 594
MlyI GAGTC 3 cut(s) 299, 593, 1483
MmeI TCCRAC 5 cut(s) 169, 589, 785, 1288, 1574
MroXI GAANNNNTTC 1 cut(s) 1422
MseI TTAA 6 cut(s) 228, 843, 918, 1190, 1194, 1612
MslI CAYNNNNRTG 1 cut(s) 587
MspI CCGG 1 cut(s) 1183
MspR9I CCNGG 2 cut(s) 355, 1464
Mva1269I GAATGC 2 cut(s) 256, 528
MvaI CCWGG 2 cut(s) 355, 1464
MvnI CGCG 1 cut(s) 1546
MwoI GCNNNNNNNGC 2 cut(s) 1382, 1550
NdeI CATATG 1 cut(s) 892
NlaIII CATG 4 cut(s) 308, 663, 827, 902
NlaIV GGNNCC 2 cut(s) 1469, 1559
NmuCI GTSAC 3 cut(s) 300, 596, 1486
NspI RCATGY 1 cut(s) 308
OliI CACNNNNGTG 1 cut(s) 587
PacI TTAATTAA 1 cut(s) 1194
PauI GCGCGC 1 cut(s) 1544
PciSI GCTCTTC 1 cut(s) 934
PctI GAATGC 2 cut(s) 256, 528
PdmI GAANNNNTTC 1 cut(s) 1422
PfeI GAWTC 3 cut(s) 75, 350, 1100
PkrI GCNGC 5 cut(s) 25, 946, 1275, 1387, 1522
PleI GAGTC 3 cut(s) 298, 593, 1483
PpsI GAGTC 3 cut(s) 298, 593, 1483
Ppu21I YACGTR 1 cut(s) 1486
PshBI ATTAAT 1 cut(s) 1190
Psp6I CCWGG 2 cut(s) 353, 1462
PspGI CCWGG 2 cut(s) 353, 1462
PspN4I GGNNCC 2 cut(s) 1469, 1559
PspPI GGNCC 2 cut(s) 1375, 1456
PstI CTGCAG 2 cut(s) 28, 949
PsuI RGATCY 5 cut(s) 31, 102, 411, 552, 1310
PteI GCGCGC 1 cut(s) 1544
RsaI GTAC 3 cut(s) 219, 265, 1605
RsaNI GTAC 3 cut(s) 218, 264, 1604
RseI CAYNNNNRTG 1 cut(s) 587
SapI GCTCTTC 1 cut(s) 934
SaqAI TTAA 6 cut(s) 228, 843, 918, 1190, 1194, 1612
SatI GCNGC 5 cut(s) 24, 945, 1274, 1386, 1521
Sau96I GGNCC 2 cut(s) 1375, 1456
SchI GAGTC 3 cut(s) 299, 593, 1483
ScrFI CCNGG 2 cut(s) 355, 1464
SduI GDGCHC 2 cut(s) 538, 594
SfaNI GCATC 1 cut(s) 1003
SfcI CTRYAG 2 cut(s) 24, 945
SinI GGWCC 1 cut(s) 1456
SmiMI CAYNNNNRTG 1 cut(s) 587
SmlI CTYRAG 1 cut(s) 1361
SmoI CTYRAG 1 cut(s) 1361
SsiI CCGC 2 cut(s) 361, 692
SspMI CTAG 6 cut(s) 258, 297, 1053, 1061, 1314, 1524
StyD4I CCNGG 2 cut(s) 353, 1462
TaaI ACNGT 6 cut(s) 9, 65, 625, 1109, 1320, 1443
TaiI ACGT 1 cut(s) 1488
TaqI TCGA 4 cut(s) 568, 730, 1030, 1404
TaqII GACCGA 2 cut(s) 483, 1473
TatI WGTACW 2 cut(s) 217, 263
TfiI GAWTC 3 cut(s) 75, 350, 1100
Tru1I TTAA 6 cut(s) 228, 843, 918, 1190, 1194, 1612
Tru9I TTAA 6 cut(s) 228, 843, 918, 1190, 1194, 1612
TscAI CASTG 2 cut(s) 343, 463
TseFI GTSAC 3 cut(s) 300, 596, 1486
TseI GCWGC 5 cut(s) 23, 944, 1273, 1385, 1520
Tsp45I GTSAC 3 cut(s) 300, 596, 1486
TspDTI ATGAA 7 cut(s) 396, 741, 768, 879, 996, 1215, 1451
TspGWI ACGGA 1 cut(s) 584
TspRI CASTG 2 cut(s) 343, 463
VpaK11BI GGWCC 1 cut(s) 1456
VspI ATTAAT 1 cut(s) 1190
XagI CCTNNNNNAGG 1 cut(s) 567
XapI RAATTY 5 cut(s) 613, 748, 1003, 1135, 1584
XbaI TCTAGA 1 cut(s) 1313
XceI RCATGY 1 cut(s) 308
XmnI GAANNNNTTC 1 cut(s) 1422
XspI CTAG 6 cut(s) 258, 297, 1053, 1061, 1314, 1524
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.