Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0008816

Physical Location & Seq

Genomic Coordinates Forward (+)

23550165 .. 23559566

Gene Structure 9402 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g20210.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2202 bp

ATGGCCACGCCAACGACGACGCCCCTGACTACCGTCGTCCCTCCCTCTTCTCCGACGCCTCCGCCTCATCACTCTCCCGCTGGATTCCCGCCTTTGGGCCCCGCCGGTCCCGCTCCCGTTGGCGGAGGGTTTCGCCCCCCCCATCCGGAGCCTCCGCCGCAGCTCTCCGGTCAGAAACGCGGCCATCCTTTCTCTGCCCGTGGTGGCTCACCAGATCGTGTAGATAGAGGAAATTTTGCCAAGCTTTTCGTTGGATCAGTTCCGAGGACAGCTACTGAGGGACAGATTCGCCCTTTGTTTGAAGAACATGGAGACGTGGTAGAGGTTGCGCTGATCAAAGACAAGAGAACAGGACTGCAGCAAGGTTGTTGTTTTATCAAGTATGCAACCTCAGAAGAAGCTGATAGGGCCATTAGAGCTTTGCATAATCAACATACTCTTCCTGGGGGAGTCGGTCCTATCCAAGTCAGATATGCTGATGGGGAACGAGAACGCCTTGGTGCAGTTGAGTACAAACTGTTTGTGGGCTCACTAAACAAACAAGCTTCGGAAAAGGAAGTTGAGGAGATTTTTTCACCATATGGTCAAGTTGAAGATGTTTATCTCATGCGTGATGAATTGAAGCAGAGTCGTGGATGTGGATTTGTTAAGTATTCCCACCGAGACATGGCCTTGTCGGCAATAAATGGTCTAAACGGGCGTTATACTATGAGAGGTTGTGAGCAACCACTAACTGTCCGGTTTGCTGATCCTAAAAGGCCTAGGCCTGGAGAATCAAGGGGTCCTGCTTTTGGAGGTCCAGGTTTTGGTCCTCGGTTTCAAAGCCCAGGGGCCAGACCAGTACCCAACTTTGGTGATCCTACGAGTGATCAGATTCCAACTAATTCTTGGCATCCAATTAGTCCACCAAACTTGGTGCCATCCCCGAATCCTAGTATTCGTAGCTTCGGGGGCCATTTGTTTCCTAGGTCTGGAGACATGGGACCCTTTAATTCGGGTGGGCATGGCAATTCTGTTGAGGGTCCACATACTGCGATGGCAGTTTCATCTCAAACAACGCAGCAGAGTCTTAACCAGTCAATACCACATATGGGTCAGCAAATATCCCCATTACAGAAGCATAATCAGTCACCTCAGCATTTGCCACCTTCCCTCCATCAGCACCCTCAAACACCATCACCCTATGCGCACACACAAACAGCACGACAGGTTGGTCAACCACAGCTTCCTCCTGCTGGCCAAACACCATTTAATCAAGCTTTACCATCACAAAGGTTACATGGTTTGGGCGGACAGCTGTCAATCTCTCAGCCTGAGGTCCAGCAGAATGCATCTTCTGCTCCAACACTTCCGACCCTTTTGAATATCAACTTAAAATCCCATTCGATGTCCGCAACAAATCAACAGCAACGTCCTTCTGCTCCTGCTCAGCAACAACTTCAAACTCTTCAGCAGGCTCCTTCTCAGTTAGCTCAGATGTTGTCGCAACAGACACAAACTCTGCAGGCAAGCTTTCAATCGTCTCAGCAGGCATTCTCCCAGCTGCAACAACAGTTGCAGCAAATGCAGCCATCAAATCAGGGTCTGGCATTGCATCAGCCTTCCCAGTCCACTAAACAGCAGCAGTCTCAATGGAATGGAATAGTACCACAGACAGTTGCCAATACTCCTGCCACAACACCAGCTGCAGATGTGCCTTCAGCCACATCTGCTGCTCCTGCTATACCTGTAACAAACCAGAATATAACTCCTACAAAATGTGTTTGGACAGAGCATACCTCCCCGGATGGATACAAGTACTATTATAATAGTGCAACAGGTGAAAGCAAGTGGGAAAAACCTGCCGAACTTGCATTGTTTGAGCAACAGCAGCACCACCAAAAGGCGTCAGTTCAGCAGCCTCATACCCCTTCACTCCCTCAAAGTGTATCTGCGCAGCAGCAAGTTTCTCAAACACAACATATGCATCTTCAAACTCATCTTCAACCACAGCCTCGGCCCAATCTTCAGTCACAACAGCCATCTTTGTCTTCAACGTACCAGGCTTCTGGAATTGTAGGCCAACAGAATGCTCAGGACTACGGATATTCAAAGTTACCCCCAACAACTAGTTCAGTTAGTGATCCTCGCTTCCAACAGGGGCTTCAGGCTGCTCAGGAATGGATGTGGAAAAACAAGCCAACAGGTGCACATAGGAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RRM_1 WW

Protein Analysis

734

Amino Acids

79.48

Weight (kDa)

9.33

Isoelectric Point (pI)

64.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	82 - 144	4.1e-15	RNA recognition motif
RRM_1	PF00076	173 - 240	5.9e-17	RNA recognition motif
WW	PF00397	589 - 614	4.4e-09	WW domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008816)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G16280 AT4G16280 AT4G16280 AT4G16280
fragaria_vesca	FvH4_4g20210
malus_domestica	MD13G1150500.v1.1 MD16G1150700.v1.1
prunus_persica	Prupe.1G114600_v2.0.a1 Prupe.1G114600_v2.0.a1 Prupe.1G114600_v2.0.a1 Prupe.1G114600_v2.0.a1
pyrus_communis	pycom13g12930 pycom16g12910
rosa_chinensis	RchiOBHm_Chr4g0425821
rosa_laevigata	RLG00000007337
rosa_multiflora	Rmu_sc0007063.1_g000004
rosa_roxburghii	Rroxscaffold_5G00367810
rosa_rugosa	Rorug04G0206600
rosa_samantha	Rh4AG263700 Rh4BG269600 Rh4CG282000 Rh4DG266000
rosa_wichuraiana	Rw4G022760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1806
AasI	GACNNNNNNGTC	1 cut(s)	1212
Acc16I	TGCGCA	2 cut(s)	1188, 1935
Acc36I	ACCTGC	1 cut(s)	1849
AccB1I	GGYRCC	1 cut(s)	916
AccB7I	CCANNNNNTGG	1 cut(s)	806
AccBSI	CCGCTC	1 cut(s)	113
AccII	CGCG	1 cut(s)	180
AccIII	TCCGGA	1 cut(s)	145
AclWI	GGATC	4 cut(s)	262, 743, 851, 2117
AcoI	YGGCCR	3 cut(s)	3, 181, 1237
AcsI	RAATTY	1 cut(s)	232
AcuI	CTGAAG	4 cut(s)	1433, 1683, 1991, 2129
AcyI	GRCGYC	3 cut(s)	20, 56, 1886
AfaI	GTAC	5 cut(s)	512, 843, 1647, 1799, 2039
AhlI	ACTAGT	1 cut(s)	2108
AjiI	CACGTC	1 cut(s)	316
AjnI	CCWGG	5 cut(s)	442, 766, 799, 826, 2040
AjuI	GAANNNNNNNTTGG	4 cut(s)	2095, 2127, 2127, 2159
Alw21I	GWGCWC	1 cut(s)	2191
Alw26I	GTCTC	5 cut(s)	306, 657, 969, 1527, 1632
Alw44I	GTGCAC	1 cut(s)	2187
AlwI	GGATC	4 cut(s)	262, 743, 851, 2117
AlwNI	CAGNNNCTG	2 cut(s)	275, 1585
Aor13HI	TCCGGA	1 cut(s)	145
ApaI	GGGCCC	1 cut(s)	101
ApaLI	GTGCAC	1 cut(s)	2187
ApoI	RAATTY	1 cut(s)	232
AspA2I	CCTAGG	2 cut(s)	761, 965
AspLEI	GCGC	3 cut(s)	331, 1189, 1936
AsuC2I	CCSGG	1 cut(s)	1784
AsuHPI	GGTGA	6 cut(s)	201, 567, 866, 1122, 1170, 1832
AvaII	GGWCC	8 cut(s)	107, 455, 782, 797, 809, 983, 1022, 1318
AvrII	CCTAGG	2 cut(s)	761, 965
AxyI	CCTNAGG	1 cut(s)	1314
BaeGI	GKGCMC	2 cut(s)	101, 2191
BalI	TGGCCA	2 cut(s)	5, 1239
BanI	GGYRCC	1 cut(s)	916
BanII	GRGCYC	2 cut(s)	101, 530
BbsI	GAAGAC	1 cut(s)	2022
Bbv12I	GWGCWC	1 cut(s)	2191
BbvCI	CCTCAGC	1 cut(s)	1134
BciT130I	CCWGG	5 cut(s)	444, 768, 801, 828, 2042
BciVI	GTATCC	1 cut(s)	1784
BclI	TGATCA	2 cut(s)	333, 868
BcnI	CCSGG	1 cut(s)	1784
BcoDI	GTCTC	5 cut(s)	306, 657, 969, 1527, 1632
BcuI	ACTAGT	1 cut(s)	2108
BfaI	CTAG	4 cut(s)	762, 933, 966, 2109
BfmI	CTRYAG	3 cut(s)	356, 1502, 1686
BfuAI	ACCTGC	1 cut(s)	1849
BfuI	GTATCC	1 cut(s)	1784
BglI	GCCNNNNNGGC	1 cut(s)	677
BlnI	CCTAGG	2 cut(s)	761, 965
BlpI	GCTNAGC	1 cut(s)	1428
BmcAI	AGTACT	1 cut(s)	1799
Bme1390I	CCNGG	6 cut(s)	444, 768, 801, 828, 1784, 2042
Bme18I	GGWCC	8 cut(s)	107, 455, 782, 797, 809, 983, 1022, 1318
BmgBI	CACGTC	1 cut(s)	316
BmrFI	CCNGG	6 cut(s)	444, 768, 801, 828, 1784, 2042
BmrI	ACTGGG	1 cut(s)	1600
BmsI	GCATC	4 cut(s)	901, 1340, 1603, 1975
BmuI	ACTGGG	1 cut(s)	1600
BoxI	GACNNNNGTC	2 cut(s)	32, 1297
BpiI	GAAGAC	1 cut(s)	2022
BplI	GAGNNNNNCTC	2 cut(s)	1763, 1795
BpmI	CTGGAG	2 cut(s)	789, 993
Bpu10I	CCTNAGC	3 cut(s)	1134, 2073, 2154
Bpu1102I	GCTNAGC	1 cut(s)	1428
BpuMI	CCSGG	1 cut(s)	1784
BsaBI	GATNNNNATC	1 cut(s)	600
BsaHI	GRCGYC	3 cut(s)	20, 56, 1886
BsaWI	WCCGGW	3 cut(s)	145, 167, 738
BsaXI	ACNNNNNCTCC	4 cut(s)	303, 333, 1137, 1167
Bse118I	RCCGGY	1 cut(s)	104
Bse1I	ACTGG	3 cut(s)	839, 1075, 1606
Bse21I	CCTNAGG	1 cut(s)	1314
Bse3DI	GCAATG	1 cut(s)	1589
Bse8I	GATNNNNATC	1 cut(s)	600
BseAI	TCCGGA	1 cut(s)	145
BseBI	CCWGG	5 cut(s)	444, 768, 801, 828, 2042
BseGI	GGATG	7 cut(s)	142, 184, 641, 892, 920, 1792, 2169
BseJI	GATNNNNATC	1 cut(s)	600
BseMI	GCAATG	1 cut(s)	1589
BseNI	ACTGG	3 cut(s)	839, 1075, 1606
BseRI	GAGGAG	1 cut(s)	578
BseSI	GKGCMC	2 cut(s)	101, 2191
BseYI	CCCAGC	1 cut(s)	1539
BsgI	GTGCAG	1 cut(s)	522
Bsh1236I	CGCG	1 cut(s)	180
BshNI	GGYRCC	1 cut(s)	916
BsiHKAI	GWGCWC	1 cut(s)	2191
BsiSI	CCGG	5 cut(s)	105, 146, 168, 739, 1784
BslFI	GGGAC	4 cut(s)	23, 93, 294, 996
BsmAI	GTCTC	5 cut(s)	306, 657, 969, 1527, 1632
BsmBI	CGTCTC	2 cut(s)	306, 1527
BsmFI	GGGAC	4 cut(s)	23, 93, 294, 996
BsmI	GAATGC	3 cut(s)	1333, 1532, 2074
Bsp120I	GGGCCC	1 cut(s)	97
Bsp1286I	GDGCHC	3 cut(s)	101, 530, 2191
Bsp13I	TCCGGA	1 cut(s)	145
Bsp143I	GATC	7 cut(s)	214, 254, 333, 748, 856, 868, 2122
Bsp1720I	GCTNAGC	1 cut(s)	1428
BspEI	TCCGGA	1 cut(s)	145
BspFNI	CGCG	1 cut(s)	180
BspMAI	CTGCAG	3 cut(s)	360, 1506, 1690
BspMI	ACCTGC	1 cut(s)	1849
BspPI	GGATC	4 cut(s)	262, 743, 851, 2117
BspT107I	GGYRCC	1 cut(s)	916
BsrBI	CCGCTC	1 cut(s)	113
BsrDI	GCAATG	1 cut(s)	1589
BsrFI	RCCGGY	1 cut(s)	104
BsrI	ACTGG	3 cut(s)	839, 1075, 1606
BssAI	RCCGGY	1 cut(s)	104
BssMI	GATC	7 cut(s)	214, 254, 333, 748, 856, 868, 2122
BssNI	GRCGYC	3 cut(s)	20, 56, 1886
BssT1I	CCWWGG	3 cut(s)	496, 761, 965
Bst2UI	CCWGG	5 cut(s)	444, 768, 801, 828, 2042
Bst4CI	ACNGT	5 cut(s)	34, 519, 736, 1554, 1657
Bst6I	CTCTTC	3 cut(s)	52, 444, 1452
BstACI	GRCGYC	3 cut(s)	20, 56, 1886
BstAPI	GCANNNNNTGC	2 cut(s)	1337, 1564
BstC8I	GCNNGC	5 cut(s)	1237, 1455, 1506, 1510, 1530
BstDSI	CCRYGG	1 cut(s)	199
BstF5I	GGATG	7 cut(s)	142, 184, 641, 892, 920, 1792, 2169
BstFNI	CGCG	1 cut(s)	180
BstHHI	GCGC	3 cut(s)	331, 1189, 1936
BstKTI	GATC	7 cut(s)	217, 257, 336, 751, 859, 871, 2125
BstMAI	GTCTC	5 cut(s)	306, 657, 969, 1527, 1632
BstMBI	GATC	7 cut(s)	214, 254, 333, 748, 856, 868, 2122
BstNI	CCWGG	5 cut(s)	444, 768, 801, 828, 2042
BstPAI	GACNNNNGTC	2 cut(s)	32, 1297
BstSCI	CCNGG	6 cut(s)	442, 766, 799, 826, 1782, 2040
BstSFI	CTRYAG	3 cut(s)	356, 1502, 1686
BstSLI	GKGCMC	2 cut(s)	101, 2191
BstUI	CGCG	1 cut(s)	180
BstV2I	GAAGAC	1 cut(s)	2022
BstXI	CCANNNNNNTGG	1 cut(s)	2048
Bsu36I	CCTNAGG	1 cut(s)	1314
BsuI	GTATCC	1 cut(s)	1784
BtgI	CCRYGG	1 cut(s)	199
BtgZI	GCGATG	1 cut(s)	1049
BtrI	CACGTC	1 cut(s)	316
BtsCI	GGATG	7 cut(s)	142, 184, 641, 892, 920, 1792, 2169
BveI	ACCTGC	1 cut(s)	1849
Cac8I	GCNNGC	5 cut(s)	1237, 1455, 1506, 1510, 1530
CaiI	CAGNNNCTG	2 cut(s)	275, 1585
CfoI	GCGC	3 cut(s)	331, 1189, 1936
Cfr10I	RCCGGY	1 cut(s)	104
CseI	GACGC	3 cut(s)	28, 64, 1875
Csp6I	GTAC	5 cut(s)	511, 842, 1646, 1798, 2038
CspCI	CAANNNNNGTGG	2 cut(s)	894, 929
CviAII	CATG	6 cut(s)	308, 607, 667, 979, 1004, 1280
CviQI	GTAC	5 cut(s)	511, 842, 1646, 1798, 2038
DpnI	GATC	7 cut(s)	216, 256, 335, 750, 858, 870, 2124
DpnII	GATC	7 cut(s)	214, 254, 333, 748, 856, 868, 2122
DrdI	GACNNNNNNGTC	1 cut(s)	1212
DseDI	GACNNNNNNGTC	1 cut(s)	1212
EaeI	YGGCCR	3 cut(s)	3, 181, 1237
Eam1104I	CTCTTC	3 cut(s)	52, 444, 1452
EarI	CTCTTC	3 cut(s)	52, 444, 1452
EciI	GGCGGA	4 cut(s)	51, 138, 144, 1305
Eco130I	CCWWGG	3 cut(s)	496, 761, 965
Eco147I	AGGCCT	2 cut(s)	760, 766
Eco24I	GRGCYC	2 cut(s)	101, 530
Eco47I	GGWCC	8 cut(s)	107, 455, 782, 797, 809, 983, 1022, 1318
Eco57I	CTGAAG	4 cut(s)	1433, 1683, 1991, 2129
Eco81I	CCTNAGG	1 cut(s)	1314
EcoO109I	RGGNCCY	3 cut(s)	98, 782, 983
EcoRII	CCWGG	5 cut(s)	442, 766, 799, 826, 2040
EcoT14I	CCWWGG	3 cut(s)	496, 761, 965
EcoT22I	ATGCAT	2 cut(s)	1333, 1968
EcoT38I	GRGCYC	2 cut(s)	101, 530
ErhI	CCWWGG	3 cut(s)	496, 761, 965
Esp3I	CGTCTC	2 cut(s)	306, 1527
FaeI	CATG	6 cut(s)	311, 610, 670, 982, 1007, 1283
FaqI	GGGAC	4 cut(s)	23, 93, 294, 996
FatI	CATG	6 cut(s)	307, 606, 666, 978, 1003, 1279
FauI	CCCGC	4 cut(s)	85, 96, 109, 118
FauNDI	CATATG	3 cut(s)	580, 1089, 1962
FbaI	TGATCA	2 cut(s)	333, 868
FokI	GGATG	7 cut(s)	129, 171, 648, 879, 907, 1799, 2176
FriOI	GRGCYC	2 cut(s)	101, 530
FspAI	RTGCGCAY	1 cut(s)	1188
FspBI	CTAG	4 cut(s)	762, 933, 966, 2109
FspI	TGCGCA	2 cut(s)	1188, 1935
GlaI	GCGC	3 cut(s)	330, 1188, 1935
GsaI	CCCAGC	1 cut(s)	1543
GsuI	CTGGAG	2 cut(s)	789, 993
HapII	CCGG	5 cut(s)	105, 146, 168, 739, 1784
HgaI	GACGC	3 cut(s)	28, 64, 1875
HhaI	GCGC	3 cut(s)	331, 1189, 1936
Hin1I	GRCGYC	3 cut(s)	20, 56, 1886
Hin1II	CATG	6 cut(s)	311, 610, 670, 982, 1007, 1283
Hin6I	GCGC	3 cut(s)	329, 1187, 1934
HinP1I	GCGC	3 cut(s)	329, 1187, 1934
HincII	GTYRAC	1 cut(s)	1217
HindII	GTYRAC	1 cut(s)	1217
HindIII	AAGCTT	4 cut(s)	242, 543, 1257, 1510
HinfI	GANTC	8 cut(s)	84, 286, 450, 628, 773, 874, 928, 1066
HpaII	CCGG	5 cut(s)	105, 146, 168, 739, 1784
HphI	GGTGA	6 cut(s)	201, 567, 866, 1122, 1170, 1832
Hpy166II	GTNNAC	5 cut(s)	905, 1025, 1217, 1611, 2189
Hpy188I	TCNGA	9 cut(s)	54, 174, 264, 394, 470, 550, 873, 1353, 1476
Hpy188III	TCNNGA	5 cut(s)	146, 972, 2049, 2075, 2156
Hpy8I	GTNNAC	5 cut(s)	905, 1025, 1217, 1611, 2189
Hpy99I	CGWCG	4 cut(s)	19, 22, 38, 58
HpyAV	CCTTC	6 cut(s)	1158, 1425, 1470, 1611, 1707, 1920
HpyCH4III	ACNGT	5 cut(s)	34, 519, 736, 1554, 1657
HpyCH4IV	ACGT	3 cut(s)	315, 1411, 2036
HpySE526I	ACGT	3 cut(s)	315, 1411, 2036
Hsp92I	GRCGYC	3 cut(s)	20, 56, 1886
Hsp92II	CATG	6 cut(s)	311, 610, 670, 982, 1007, 1283
HspAI	GCGC	3 cut(s)	329, 1187, 1934
KflI	GGGWCCC	1 cut(s)	983
Kpn2I	TCCGGA	1 cut(s)	145
Ksp22I	TGATCA	2 cut(s)	333, 868
Kzo9I	GATC	7 cut(s)	214, 254, 333, 748, 856, 868, 2122
LmnI	GCTCC	6 cut(s)	118, 148, 1345, 1426, 1462, 1720
LweI	GCATC	4 cut(s)	901, 1340, 1603, 1975
MaeI	CTAG	4 cut(s)	762, 933, 966, 2109
MaeII	ACGT	3 cut(s)	315, 1411, 2036
MaeIII	GTNAC	5 cut(s)	1128, 1275, 1729, 2010, 2094
MalI	GATC	7 cut(s)	216, 256, 335, 750, 858, 870, 2124
MbiI	CCGCTC	1 cut(s)	113
MboI	GATC	7 cut(s)	214, 254, 333, 748, 856, 868, 2122
MhlI	GDGCHC	3 cut(s)	101, 530, 2191
MlsI	TGGCCA	2 cut(s)	5, 1239
MluCI	AATT	8 cut(s)	232, 617, 883, 897, 991, 1009, 2052, 2197
MluNI	TGGCCA	2 cut(s)	5, 1239
MlyI	GAGTC	3 cut(s)	459, 637, 1075
MmeI	TCCRAC	6 cut(s)	77, 232, 902, 1367, 1376, 2158
Mox20I	TGGCCA	2 cut(s)	5, 1239
Mph1103I	ATGCAT	2 cut(s)	1333, 1968
MroI	TCCGGA	1 cut(s)	145
MscI	TGGCCA	2 cut(s)	5, 1239
MseI	TTAA	5 cut(s)	648, 990, 1071, 1251, 1373
Msp20I	TGGCCA	2 cut(s)	5, 1239
MspA1I	CMGCKG	4 cut(s)	80, 1297, 1543, 1685
MspI	CCGG	5 cut(s)	105, 146, 168, 739, 1784
MspR9I	CCNGG	6 cut(s)	444, 768, 801, 828, 1784, 2042
Mva1269I	GAATGC	3 cut(s)	1333, 1532, 2074
MvaI	CCWGG	5 cut(s)	444, 768, 801, 828, 2042
MvnI	CGCG	1 cut(s)	180
NciI	CCSGG	1 cut(s)	1784
NdeI	CATATG	3 cut(s)	580, 1089, 1962
NdeII	GATC	7 cut(s)	214, 254, 333, 748, 856, 868, 2122
NlaIII	CATG	6 cut(s)	311, 610, 670, 982, 1007, 1283
NmeAIII	GCCGAG	1 cut(s)	1975
NmuCI	GTSAC	2 cut(s)	1128, 2010
NsbI	TGCGCA	2 cut(s)	1188, 1935
NsiI	ATGCAT	2 cut(s)	1333, 1968
PasI	CCCWGGG	1 cut(s)	827
PceI	AGGCCT	2 cut(s)	760, 766
PcsI	WCGNNNNNNNCGW	1 cut(s)	14
PctI	GAATGC	3 cut(s)	1333, 1532, 2074
PfeI	GAWTC	5 cut(s)	84, 286, 773, 874, 928
PflMI	CCANNNNNTGG	1 cut(s)	806
PleI	GAGTC	3 cut(s)	458, 636, 1074
PpsI	GAGTC	3 cut(s)	458, 636, 1074
PpuMI	RGGWCCY	2 cut(s)	782, 983
PshAI	GACNNNNGTC	2 cut(s)	32, 1297
PsiI	TTATAA	1 cut(s)	1806
Psp5II	RGGWCCY	2 cut(s)	782, 983
Psp6I	CCWGG	5 cut(s)	442, 766, 799, 826, 2040
PspFI	CCCAGC	1 cut(s)	1539
PspGI	CCWGG	5 cut(s)	442, 766, 799, 826, 2040
PspOMI	GGGCCC	1 cut(s)	97
PspPPI	RGGWCCY	2 cut(s)	782, 983
PstI	CTGCAG	3 cut(s)	360, 1506, 1690
PstNI	CAGNNNCTG	2 cut(s)	275, 1585
PvuII	CAGCTG	3 cut(s)	1297, 1543, 1685
RsaI	GTAC	5 cut(s)	512, 843, 1647, 1799, 2039
RsaNI	GTAC	5 cut(s)	511, 842, 1646, 1798, 2038
SaqAI	TTAA	5 cut(s)	648, 990, 1071, 1251, 1373
Sau3AI	GATC	7 cut(s)	214, 254, 333, 748, 856, 868, 2122
ScaI	AGTACT	1 cut(s)	1799
SchI	GAGTC	3 cut(s)	459, 637, 1075
ScrFI	CCNGG	6 cut(s)	444, 768, 801, 828, 1784, 2042
SduI	GDGCHC	3 cut(s)	101, 530, 2191
SfaNI	GCATC	4 cut(s)	901, 1340, 1603, 1975
SfcI	CTRYAG	3 cut(s)	356, 1502, 1686
SinI	GGWCC	8 cut(s)	107, 455, 782, 797, 809, 983, 1022, 1318
SpeI	ACTAGT	1 cut(s)	2108
Sse9I	AATT	8 cut(s)	232, 617, 883, 897, 991, 1009, 2052, 2197
SseBI	AGGCCT	2 cut(s)	760, 766
SspMI	CTAG	4 cut(s)	762, 933, 966, 2109
StuI	AGGCCT	2 cut(s)	760, 766
StyD4I	CCNGG	6 cut(s)	442, 766, 799, 826, 1782, 2040
StyI	CCWWGG	3 cut(s)	496, 761, 965
TaaI	ACNGT	5 cut(s)	34, 519, 736, 1554, 1657
TaiI	ACGT	3 cut(s)	318, 1414, 2039
TaqI	TCGA	1 cut(s)	1385
TaqII	GACCGA	1 cut(s)	443
TasI	AATT	8 cut(s)	232, 617, 883, 897, 991, 1009, 2052, 2197
TatI	WGTACW	2 cut(s)	510, 1797
TauI	GCSGC	2 cut(s)	160, 183
TfiI	GAWTC	5 cut(s)	84, 286, 773, 874, 928
Tru1I	TTAA	5 cut(s)	648, 990, 1071, 1251, 1373
Tru9I	TTAA	5 cut(s)	648, 990, 1071, 1251, 1373
TseFI	GTSAC	2 cut(s)	1128, 2010
Tsp45I	GTSAC	2 cut(s)	1128, 2010
TspDTI	ATGAA	2 cut(s)	630, 1035
TspGWI	ACGGA	1 cut(s)	2097
Van91I	CCANNNNNTGG	1 cut(s)	806
VneI	GTGCAC	1 cut(s)	2187
VpaK11BI	GGWCC	8 cut(s)	107, 455, 782, 797, 809, 983, 1022, 1318
XapI	RAATTY	1 cut(s)	232
XcmI	CCANNNNNNNNNTGG	1 cut(s)	885
XmaJI	CCTAGG	2 cut(s)	761, 965
XspI	CTAG	4 cut(s)	762, 933, 966, 2109
ZrmI	AGTACT	1 cut(s)	1799
Zsp2I	ATGCAT	2 cut(s)	1333, 1968

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.