Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0008816

Physical Location & Seq

Genomic Coordinates Reverse (-)

49664622 .. 49674799

Gene Structure 10178 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00367810.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2091 bp

ATGCCCGCCGGACCCGCTGCCGGTGCCGGAGGGTTTCGCCCCACCCACCCCGACCCTCCGCCGCTCTCCGGTCAGAAACGAGGCCATCCTTTCTCTGCCCGTGGTGGCTCTCCAGATCGTTTTGATAGAGGAGGGTTTGCCAAGCTTTTTGTTGGATCAGTTCCGAGGACAGCCACTGAGGGAGAGATTCGCCCTTTGTTTGAAGAACATGGAGAAGTGGTAGAGGTTGCACTGATCAAAGACAAGAAAACTGGACTGCAGCAAGGTTGTTGTTTTATTAAATATGCAACCTCAGAAGAAGCTGATAGGGCCATTAGAGCTTTGCATAATCAGCATACTCTTCCTGGGGGAGTAGGTCCTATCCAAGTCAGATATGCTGATGGGGAACGAGAACGCCTTGTTGAGTACAAACTGTTTGTGGGCTCACTGAACAAACAAGCTACGGAAAAGGAAGTTGAGGAAATTTTTTCACCATATGGTCTAGTTGAAGATGTTTACCTCATGCGTGATGAATTGAAGCAGAGTCGTGGATGTGGATTCGTTAAGTATTCCCGCCGAGATATGGCGTTGTCAGCAATAAATGGTCTAAACGGGCGCTACACTATGAGAGGTTGTGAGCAACCACTAACTGTCCGGTTTGCTGATCCTAAAAGGCCTAGGCCTGGAGAATCAAGGGGTCCTTCTTTTGGAGGTCCAGGTTTTGGTCCTCGGTTTCAAAGCCCAGGGGCCAGACCAGTACCTAACTTTGGTGATCCTACGAGTGATCAAATTCCAACTAATGCTTGGCATCCAATTAGTCCACCAAACTTGGTGCCATCCCCCAATCCTGGTATACGCAGCTTCGGGGCCCATTTGCTTCCTAGATCTGGAGACATGGGACCCTTTAATTCGGGCGGCCATGGCAGCTCTGTAGAGGGTCCACATCCTGTGATGGCAGTTTCATCTCAAACAACACAGCAGAATCTTAACCAGTCGATGCCACATATGGGCCAGCAAATTTCCCCATTACAGAAGCATAATCAGTCACCTCAGCATTTGCCACCTTCCCTTCATCAGCACCCTCAAACTCCAGCACCCTACGCACTCACACAAACAGCACGGCAGGTTGGTCAACCACAGCTTCCTCCTCCTGCTGGCCAAACACCATTTAATCAAGCTTTACCATCACAAAGGTTACATGGGTTGGGCGGACAGCTGTCGGCCTCTCAGCCTGAGGTCCAGCAGAATGCATCATCTGCTCCTGCATTACCAACCCTTTTGAATATCAACTTAAAATCTCATTCGATGTCCGCAACAAATCAACAGCAACGTCCTTCTGCTCCTGTTCAACAACAACTTCAAACGCTTCAGCAGTCTCCTTCTCAGTTAGCTCAGATGCTGTCACAACAGACACAGACTTTGCAGGCAAGCTTTCAATCGTCTCAGCAGGCGTTCTCGCAGCTGCAACAACAGGTGCAGCAAATGCAACCATCAAATCAGGGTCTGTCGCTGCATCAGACTTCCCAGTCCAACAAACAGCAGCAGTCTCAGTGGAATGGAATAGTACCACAGACAGTTGCAAATACCCCTGCTACAACACCAGCTGCAGATGTGCCTTCAGCCACATCTGTTGCTCCTGCTATACCTGTAACAAACCAGACTATAACCCCTGCAAAATGTATTTGGACAGAGCACACCTCCCCGGATGGATACAAGTACTATTATAATAGTGCAACTGGTGAAAGCAGGTGGGAAAAACCTGCCGAACTTGCATTGTTTGAGCAACAGCAGCACCACCAAAAGACATCAGTTCAGCAGCCTCAGACCCCTTCGCTACCTCAAAATCTATCCGCGCAGCAGCAAGCTTCTCAAACACAACAGATGCATCTTCAATCTCATCTTCATCCACAGCCTCGGCCCAATCTTCAGTCGCAACAGCCATCTTTGTCTTCAACGTACCAGGCTTCTGGAATTGTAGGCCAACAAAATGCTCAGGACTTCGGATTTTCAAAGTTACCCCCGACAACCAGCTCAGTTAGTGATCCTCGCTTCCAACAGGGGCTTCAGGCTGCTCAGGAATGGATGTGGAAGAACAAGCCGACAGGTGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RRM_1 WW

Protein Analysis

696

Amino Acids

75.67

Weight (kDa)

9.29

Isoelectric Point (pI)

65.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	49 - 111	3.7e-15	RNA recognition motif
RRM_1	PF00076	138 - 205	6.2e-17	RNA recognition motif
WW	PF00397	555 - 580	1.5e-09	WW domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008816)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G16280 AT4G16280 AT4G16280 AT4G16280
fragaria_vesca	FvH4_4g20210
malus_domestica	MD13G1150500.v1.1 MD16G1150700.v1.1
prunus_persica	Prupe.1G114600_v2.0.a1 Prupe.1G114600_v2.0.a1 Prupe.1G114600_v2.0.a1 Prupe.1G114600_v2.0.a1
pyrus_communis	pycom13g12930 pycom16g12910
rosa_chinensis	RchiOBHm_Chr4g0425821
rosa_laevigata	RLG00000007337
rosa_multiflora	Rmu_sc0007063.1_g000004
rosa_roxburghii	Rroxscaffold_5G00367810
rosa_rugosa	Rorug04G0206600
rosa_samantha	Rh4AG263700 Rh4BG269600 Rh4CG282000 Rh4DG266000
rosa_wichuraiana	Rw4G022760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1704
AarI	CACCTGC	1 cut(s)	1716
AasI	GACNNNNNNGTC	1 cut(s)	1504
Acc36I	ACCTGC	3 cut(s)	1093, 1716, 1747
AccB1I	GGYRCC	2 cut(s)	23, 811
AccB7I	CCANNNNNTGG	1 cut(s)	701
AccBSI	CCGCTC	1 cut(s)	64
AccI	GTMKAC	1 cut(s)	832
AccII	CGCG	1 cut(s)	1832
AciI	CCGC	9 cut(s)	6, 15, 59, 62, 553, 894, 1188, 1290, 1830
AclWI	GGATC	4 cut(s)	163, 638, 746, 2015
AcoI	YGGCCR	2 cut(s)	895, 1135
AcsI	RAATTY	3 cut(s)	462, 768, 996
AcuI	CTGAAG	4 cut(s)	1331, 1581, 1889, 2027
AfaI	GTAC	5 cut(s)	407, 738, 1545, 1697, 1937
AjnI	CCWGG	6 cut(s)	343, 661, 694, 721, 826, 1938
AjuI	GAANNNNNNNTTGG	2 cut(s)	2025, 2057
Alw21I	GWGCWC	1 cut(s)	1674
Alw26I	GTCTC	4 cut(s)	864, 1359, 1425, 1530
AlwI	GGATC	4 cut(s)	163, 638, 746, 2015
AlwNI	CAGNNNCTG	3 cut(s)	176, 1378, 1483
ApaI	GGGCCC	1 cut(s)	850
ApoI	RAATTY	3 cut(s)	462, 768, 996
ArsI	GACNNNNNNTTYG	2 cut(s)	1381, 1413
AspA2I	CCTAGG	1 cut(s)	656
AspLEI	GCGC	2 cut(s)	597, 1834
AsuC2I	CCSGG	1 cut(s)	1682
AsuHPI	GGTGA	4 cut(s)	462, 761, 1017, 1730
AvaII	GGWCC	8 cut(s)	11, 356, 677, 692, 704, 878, 917, 1216
AvrII	CCTAGG	1 cut(s)	656
AxyI	CCTNAGG	1 cut(s)	1212
BaeGI	GKGCMC	1 cut(s)	850
BalI	TGGCCA	1 cut(s)	1137
BanI	GGYRCC	2 cut(s)	23, 811
BanII	GRGCYC	2 cut(s)	425, 850
BbsI	GAAGAC	1 cut(s)	1920
Bbv12I	GWGCWC	1 cut(s)	1674
BbvCI	CCTCAGC	1 cut(s)	1029
BccI	CCATC	8 cut(s)	93, 374, 823, 925, 1171, 1477, 1679, 1927
BceAI	ACGGC	1 cut(s)	1115
BciT130I	CCWGG	6 cut(s)	345, 663, 696, 723, 828, 1940
BciVI	GTATCC	1 cut(s)	1682
BclI	TGATCA	2 cut(s)	234, 763
BcnI	CCSGG	1 cut(s)	1682
BcoDI	GTCTC	4 cut(s)	864, 1359, 1425, 1530
BfaI	CTAG	3 cut(s)	482, 657, 861
BfmI	CTRYAG	3 cut(s)	257, 909, 1584
BfoI	RGCGCY	1 cut(s)	598
BfuAI	ACCTGC	3 cut(s)	1093, 1716, 1747
BfuI	GTATCC	1 cut(s)	1682
BglII	AGATCT	1 cut(s)	863
BlnI	CCTAGG	1 cut(s)	656
BmcAI	AGTACT	1 cut(s)	1697
Bme1390I	CCNGG	7 cut(s)	345, 663, 696, 723, 828, 1682, 1940
Bme18I	GGWCC	8 cut(s)	11, 356, 677, 692, 704, 878, 917, 1216
BmrFI	CCNGG	7 cut(s)	345, 663, 696, 723, 828, 1682, 1940
BmrI	ACTGGG	1 cut(s)	1498
BmsI	GCATC	7 cut(s)	796, 966, 1238, 1365, 1501, 1851, 1873
BmuI	ACTGGG	1 cut(s)	1498
BoxI	GACNNNNGTC	1 cut(s)	1195
BpiI	GAAGAC	1 cut(s)	1920
BplI	GAGNNNNNCTC	2 cut(s)	1661, 1693
BpmI	CTGGAG	4 cut(s)	96, 684, 888, 1053
Bpu10I	CCTNAGC	3 cut(s)	1029, 1971, 2052
BpuMI	CCSGG	1 cut(s)	1682
BsaWI	WCCGGW	2 cut(s)	68, 633
BsaXI	ACNNNNNCTCC	2 cut(s)	204, 234
Bse118I	RCCGGY	1 cut(s)	20
Bse1I	ACTGG	5 cut(s)	256, 734, 970, 1504, 1720
Bse21I	CCTNAGG	1 cut(s)	1212
BseBI	CCWGG	6 cut(s)	345, 663, 696, 723, 828, 1940
BseGI	GGATG	8 cut(s)	85, 536, 787, 815, 922, 1690, 1882, 2067
BseNI	ACTGG	5 cut(s)	256, 734, 970, 1504, 1720
BseRI	GAGGAG	2 cut(s)	144, 1116
BseSI	GKGCMC	1 cut(s)	850
BsgI	GTGCAG	1 cut(s)	1475
Bsh1236I	CGCG	1 cut(s)	1832
BshNI	GGYRCC	2 cut(s)	23, 811
BsiHKAI	GWGCWC	1 cut(s)	1674
BsiSI	CCGG	6 cut(s)	9, 21, 27, 69, 634, 1682
BslFI	GGGAC	1 cut(s)	891
BsmAI	GTCTC	4 cut(s)	864, 1359, 1425, 1530
BsmBI	CGTCTC	1 cut(s)	1425
BsmFI	GGGAC	1 cut(s)	891
BsmI	GAATGC	1 cut(s)	1231
Bsp120I	GGGCCC	1 cut(s)	846
Bsp1286I	GDGCHC	3 cut(s)	425, 850, 1674
Bsp143I	GATC	8 cut(s)	115, 155, 234, 643, 751, 763, 863, 2020
Bsp19I	CCATGG	1 cut(s)	898
BspACI	CCGC	9 cut(s)	6, 15, 59, 62, 553, 894, 1188, 1290, 1830
BspFNI	CGCG	1 cut(s)	1832
BspMAI	CTGCAG	2 cut(s)	261, 1588
BspMI	ACCTGC	3 cut(s)	1093, 1716, 1747
BspPI	GGATC	4 cut(s)	163, 638, 746, 2015
BspT107I	GGYRCC	2 cut(s)	23, 811
BsrBI	CCGCTC	1 cut(s)	64
BsrFI	RCCGGY	1 cut(s)	20
BsrI	ACTGG	5 cut(s)	256, 734, 970, 1504, 1720
BssAI	RCCGGY	1 cut(s)	20
BssMI	GATC	8 cut(s)	115, 155, 234, 643, 751, 763, 863, 2020
BssNAI	GTATAC	1 cut(s)	833
BssT1I	CCWWGG	2 cut(s)	656, 898
Bst1107I	GTATAC	1 cut(s)	833
Bst2UI	CCWGG	6 cut(s)	345, 663, 696, 723, 828, 1940
Bst4CI	ACNGT	3 cut(s)	414, 631, 1555
Bst6I	CTCTTC	1 cut(s)	345
BstAPI	GCANNNNNTGC	2 cut(s)	1235, 1462
BstC8I	GCNNGC	7 cut(s)	6, 992, 1135, 1404, 1408, 1428, 1842
BstDSI	CCRYGG	2 cut(s)	100, 898
BstF5I	GGATG	8 cut(s)	85, 536, 787, 815, 922, 1690, 1882, 2067
BstFNI	CGCG	1 cut(s)	1832
BstH2I	RGCGCY	1 cut(s)	598
BstHHI	GCGC	2 cut(s)	597, 1834
BstKTI	GATC	8 cut(s)	118, 158, 237, 646, 754, 766, 866, 2023
BstMAI	GTCTC	4 cut(s)	864, 1359, 1425, 1530
BstMBI	GATC	8 cut(s)	115, 155, 234, 643, 751, 763, 863, 2020
BstNI	CCWGG	6 cut(s)	345, 663, 696, 723, 828, 1940
BstPAI	GACNNNNGTC	1 cut(s)	1195
BstSCI	CCNGG	7 cut(s)	343, 661, 694, 721, 826, 1680, 1938
BstSFI	CTRYAG	3 cut(s)	257, 909, 1584
BstSLI	GKGCMC	1 cut(s)	850
BstUI	CGCG	1 cut(s)	1832
BstV2I	GAAGAC	1 cut(s)	1920
BstX2I	RGATCY	1 cut(s)	863
BstXI	CCANNNNNNTGG	1 cut(s)	1946
BstYI	RGATCY	1 cut(s)	863
BstZ17I	GTATAC	1 cut(s)	833
Bsu36I	CCTNAGG	1 cut(s)	1212
BsuI	GTATCC	1 cut(s)	1682
BtgI	CCRYGG	2 cut(s)	100, 898
BtsCI	GGATG	8 cut(s)	85, 536, 787, 815, 922, 1690, 1882, 2067
BtsIMutI	CAGTG	4 cut(s)	174, 230, 425, 1535
BveI	ACCTGC	3 cut(s)	1093, 1716, 1747
Cac8I	GCNNGC	7 cut(s)	6, 992, 1135, 1404, 1408, 1428, 1842
CaiI	CAGNNNCTG	3 cut(s)	176, 1378, 1483
CfoI	GCGC	2 cut(s)	597, 1834
Cfr10I	RCCGGY	1 cut(s)	20
Csp6I	GTAC	5 cut(s)	406, 737, 1544, 1696, 1936
CspCI	CAANNNNNGTGG	4 cut(s)	789, 824, 1591, 1626
CviAII	CATG	5 cut(s)	209, 502, 874, 899, 1178
CviQI	GTAC	5 cut(s)	406, 737, 1544, 1696, 1936
DpnI	GATC	8 cut(s)	117, 157, 236, 645, 753, 765, 865, 2022
DpnII	GATC	8 cut(s)	115, 155, 234, 643, 751, 763, 863, 2020
DrdI	GACNNNNNNGTC	1 cut(s)	1504
DseDI	GACNNNNNNGTC	1 cut(s)	1504
EaeI	YGGCCR	2 cut(s)	895, 1135
Eam1104I	CTCTTC	1 cut(s)	345
EarI	CTCTTC	1 cut(s)	345
EciI	GGCGGA	2 cut(s)	48, 1203
Eco130I	CCWWGG	2 cut(s)	656, 898
Eco147I	AGGCCT	2 cut(s)	655, 661
Eco24I	GRGCYC	2 cut(s)	425, 850
Eco47I	GGWCC	8 cut(s)	11, 356, 677, 692, 704, 878, 917, 1216
Eco57I	CTGAAG	4 cut(s)	1331, 1581, 1889, 2027
Eco81I	CCTNAGG	1 cut(s)	1212
EcoO109I	RGGNCCY	4 cut(s)	356, 677, 846, 878
EcoRII	CCWGG	6 cut(s)	343, 661, 694, 721, 826, 1938
EcoT14I	CCWWGG	2 cut(s)	656, 898
EcoT22I	ATGCAT	2 cut(s)	1231, 1866
EcoT38I	GRGCYC	2 cut(s)	425, 850
ErhI	CCWWGG	2 cut(s)	656, 898
Esp3I	CGTCTC	1 cut(s)	1425
FaeI	CATG	5 cut(s)	212, 505, 877, 902, 1181
FalI	AAGNNNNNCTT	2 cut(s)	664, 696
FaqI	GGGAC	1 cut(s)	891
FatI	CATG	5 cut(s)	208, 501, 873, 898, 1177
FauI	CCCGC	3 cut(s)	13, 22, 560
FauNDI	CATATG	2 cut(s)	475, 984
FbaI	TGATCA	2 cut(s)	234, 763
FblI	GTMKAC	1 cut(s)	832
FokI	GGATG	8 cut(s)	72, 543, 774, 802, 909, 1697, 1869, 2074
FriOI	GRGCYC	2 cut(s)	425, 850
FspBI	CTAG	3 cut(s)	482, 657, 861
GlaI	GCGC	2 cut(s)	596, 1833
GsuI	CTGGAG	4 cut(s)	96, 684, 888, 1053
HaeII	RGCGCY	1 cut(s)	598
HapII	CCGG	6 cut(s)	9, 21, 27, 69, 634, 1682
HhaI	GCGC	2 cut(s)	597, 1834
Hin1II	CATG	5 cut(s)	212, 505, 877, 902, 1181
Hin6I	GCGC	2 cut(s)	595, 1832
HinP1I	GCGC	2 cut(s)	595, 1832
HincII	GTYRAC	1 cut(s)	1112
HindII	GTYRAC	1 cut(s)	1112
HindIII	AAGCTT	4 cut(s)	143, 1155, 1408, 1842
HinfI	GANTC	5 cut(s)	187, 523, 537, 668, 961
HpaII	CCGG	6 cut(s)	9, 21, 27, 69, 634, 1682
HphI	GGTGA	4 cut(s)	462, 761, 1017, 1730
Hpy166II	GTNNAC	5 cut(s)	496, 800, 833, 920, 1112
Hpy188I	TCNGA	8 cut(s)	75, 165, 295, 371, 1374, 1497, 1803, 1982
Hpy188III	TCNNGA	5 cut(s)	113, 867, 1947, 1973, 2054
Hpy8I	GTNNAC	5 cut(s)	496, 800, 833, 920, 1112
HpyAV	CCTTC	7 cut(s)	690, 1053, 1058, 1323, 1368, 1605, 1818
HpyCH4III	ACNGT	3 cut(s)	414, 631, 1555
HpyCH4IV	ACGT	2 cut(s)	1309, 1934
HpySE526I	ACGT	2 cut(s)	1309, 1934
Hsp92II	CATG	5 cut(s)	212, 505, 877, 902, 1181
HspAI	GCGC	2 cut(s)	595, 1832
KflI	GGGWCCC	1 cut(s)	878
Ksp22I	TGATCA	2 cut(s)	234, 763
Kzo9I	GATC	8 cut(s)	115, 155, 234, 643, 751, 763, 863, 2020
LmnI	GCTCC	3 cut(s)	1243, 1324, 1618
LweI	GCATC	7 cut(s)	796, 966, 1238, 1365, 1501, 1851, 1873
MaeI	CTAG	3 cut(s)	482, 657, 861
MaeII	ACGT	2 cut(s)	1309, 1934
MaeIII	GTNAC	5 cut(s)	1023, 1173, 1380, 1627, 1992
MalI	GATC	8 cut(s)	117, 157, 236, 645, 753, 765, 865, 2022
MbiI	CCGCTC	1 cut(s)	64
MboI	GATC	8 cut(s)	115, 155, 234, 643, 751, 763, 863, 2020
MboII	GAAGA	9 cut(s)	215, 308, 332, 500, 1859, 1871, 1895, 1920, 2080
MflI	RGATCY	1 cut(s)	863
MhlI	GDGCHC	3 cut(s)	425, 850, 1674
MlsI	TGGCCA	1 cut(s)	1137
MluCI	AATT	7 cut(s)	462, 512, 768, 792, 886, 996, 1950
MluNI	TGGCCA	1 cut(s)	1137
MlyI	GAGTC	1 cut(s)	532
MmeI	TCCRAC	4 cut(s)	133, 797, 1533, 2056
Mox20I	TGGCCA	1 cut(s)	1137
Mph1103I	ATGCAT	2 cut(s)	1231, 1866
MscI	TGGCCA	1 cut(s)	1137
MseI	TTAA	6 cut(s)	279, 543, 885, 966, 1149, 1271
Msp20I	TGGCCA	1 cut(s)	1137
MspA1I	CMGCKG	4 cut(s)	17, 1195, 1441, 1583
MspI	CCGG	6 cut(s)	9, 21, 27, 69, 634, 1682
MspR9I	CCNGG	7 cut(s)	345, 663, 696, 723, 828, 1682, 1940
Mva1269I	GAATGC	1 cut(s)	1231
MvaI	CCWGG	6 cut(s)	345, 663, 696, 723, 828, 1940
MvnI	CGCG	1 cut(s)	1832
NciI	CCSGG	1 cut(s)	1682
NcoI	CCATGG	1 cut(s)	898
NdeI	CATATG	2 cut(s)	475, 984
NdeII	GATC	8 cut(s)	115, 155, 234, 643, 751, 763, 863, 2020
NlaIII	CATG	5 cut(s)	212, 505, 877, 902, 1181
NmeAIII	GCCGAG	2 cut(s)	581, 1873
NmuCI	GTSAC	2 cut(s)	1023, 1380
NsiI	ATGCAT	2 cut(s)	1231, 1866
PaqCI	CACCTGC	1 cut(s)	1716
PasI	CCCWGGG	1 cut(s)	722
PceI	AGGCCT	2 cut(s)	655, 661
PctI	GAATGC	1 cut(s)	1231
PfeI	GAWTC	4 cut(s)	187, 537, 668, 961
PflMI	CCANNNNNTGG	1 cut(s)	701
PleI	GAGTC	1 cut(s)	531
PpsI	GAGTC	1 cut(s)	531
PpuMI	RGGWCCY	3 cut(s)	356, 677, 878
PshAI	GACNNNNGTC	1 cut(s)	1195
PsiI	TTATAA	1 cut(s)	1704
Psp5II	RGGWCCY	3 cut(s)	356, 677, 878
Psp6I	CCWGG	6 cut(s)	343, 661, 694, 721, 826, 1938
PspGI	CCWGG	6 cut(s)	343, 661, 694, 721, 826, 1938
PspOMI	GGGCCC	1 cut(s)	846
PspPPI	RGGWCCY	3 cut(s)	356, 677, 878
PstI	CTGCAG	2 cut(s)	261, 1588
PstNI	CAGNNNCTG	3 cut(s)	176, 1378, 1483
PsuI	RGATCY	1 cut(s)	863
PvuII	CAGCTG	3 cut(s)	1195, 1441, 1583
RsaI	GTAC	5 cut(s)	407, 738, 1545, 1697, 1937
RsaNI	GTAC	5 cut(s)	406, 737, 1544, 1696, 1936
SaqAI	TTAA	6 cut(s)	279, 543, 885, 966, 1149, 1271
Sau3AI	GATC	8 cut(s)	115, 155, 234, 643, 751, 763, 863, 2020
ScaI	AGTACT	1 cut(s)	1697
SchI	GAGTC	1 cut(s)	532
ScrFI	CCNGG	7 cut(s)	345, 663, 696, 723, 828, 1682, 1940
SduI	GDGCHC	3 cut(s)	425, 850, 1674
SfaNI	GCATC	7 cut(s)	796, 966, 1238, 1365, 1501, 1851, 1873
SfcI	CTRYAG	3 cut(s)	257, 909, 1584
SinI	GGWCC	8 cut(s)	11, 356, 677, 692, 704, 878, 917, 1216
Sse9I	AATT	7 cut(s)	462, 512, 768, 792, 886, 996, 1950
SseBI	AGGCCT	2 cut(s)	655, 661
SsiI	CCGC	9 cut(s)	6, 15, 59, 62, 553, 894, 1188, 1290, 1830
SspMI	CTAG	3 cut(s)	482, 657, 861
StuI	AGGCCT	2 cut(s)	655, 661
StyD4I	CCNGG	7 cut(s)	343, 661, 694, 721, 826, 1680, 1938
StyI	CCWWGG	2 cut(s)	656, 898
TaaI	ACNGT	3 cut(s)	414, 631, 1555
TaiI	ACGT	2 cut(s)	1312, 1937
TaqI	TCGA	2 cut(s)	974, 1283
TasI	AATT	7 cut(s)	462, 512, 768, 792, 886, 996, 1950
TatI	WGTACW	2 cut(s)	405, 1695
TauI	GCSGC	2 cut(s)	64, 897
TfiI	GAWTC	4 cut(s)	187, 537, 668, 961
Tru1I	TTAA	6 cut(s)	279, 543, 885, 966, 1149, 1271
Tru9I	TTAA	6 cut(s)	279, 543, 885, 966, 1149, 1271
TscAI	CASTG	4 cut(s)	181, 237, 432, 1535
TseFI	GTSAC	2 cut(s)	1023, 1380
Tsp45I	GTSAC	2 cut(s)	1023, 1380
TspDTI	ATGAA	4 cut(s)	525, 930, 1040, 1871
TspGWI	ACGGA	1 cut(s)	458
TspRI	CASTG	4 cut(s)	181, 237, 432, 1535
Van91I	CCANNNNNTGG	1 cut(s)	701
VpaK11BI	GGWCC	8 cut(s)	11, 356, 677, 692, 704, 878, 917, 1216
XapI	RAATTY	3 cut(s)	462, 768, 996
XcmI	CCANNNNNNNNNTGG	1 cut(s)	780
XmaJI	CCTAGG	1 cut(s)	656
XmiI	GTMKAC	1 cut(s)	832
XspI	CTAG	3 cut(s)	482, 657, 861
ZrmI	AGTACT	1 cut(s)	1697
Zsp2I	ATGCAT	2 cut(s)	1231, 1866

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.