Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr16

Orthogroup ID

OG0008816

Physical Location & Seq

Genomic Coordinates Forward (+)

11881811 .. 11891579

Gene Structure 9769 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD16G1150700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2208 bp

ATGAACCACCAGAGCCACCACACTCGCCGCAGCCCTCCTAACTATCGCGGCGGAGGAGGTCGTGGTAGTGGTGGTCCACACCGTGGCTTCGACACCCCGCCTCGCGACTCTTCCGGTGGGTTCCGGTCATTTGGGGGCGCCGGCGCCGGCGGTGGAGGGTTTGGCCCGAACTACCAGGACCCACCTCCGCTATCGGGTCAGAAACGAGGTTTTACTCGTGGAGGTTCTCCAGATCGTTTCGATAGAGGCAGCTTTGCCAAACTATTTATTGGATCAGTTCCTAGGACAGCCACCGAGGAAGATATTCGTCCTGTGTTTGAAGAACATGGAGAAGTGATAGAGGTTGCTCTGATCAAAGATAAGAAAACAGGACAGCAGCAAGGTTGTTGTTTTATAAAATATGCAACCTCAGAAGAAGCTGGTAGGGCAATTAGAGCTTTGCATAATCAACATACTCTTCCTGGGGGAACGGGTCCTATCCAAGTCAGATATGCCGATGGTGAACGAGAACGCCTTGGTGCGGTTGAGTACAAATTATTTGTGGGATCACTGAACAAACAAGCTACGGAAAAGGAAGTTGAGGAAATTTTTTCACCATTTGGTCAGGTTGAAGATGTTTACCTCATGCGTGATGAATTGAAGCAGAGTCGTGGATGTGGATTTGTAAAGTACTCCCAGAGAGATATGGCATTGGCAGCTATAAATGGTCTTAATGGGATATATACAATGAGAGGTTGTGATCAACCACTAACTGTCCGGTTTGCTGATCCTAAAAGGCCTAGGCTTGGAGATTCAAGGGGTCCTGCATTTGGGGGTCCAGGTTTTGGTCCTCGATTTCAAGCCCCAGGGCCCAGACCAATGCCTAACTTTGGCGATCCTATGCGCGATCAAATTCCAACTAATACTTGGCATCCAATGAGTCCACCAAACTTAGGATCATCCACCAATCCTGGTAGTCGTGGCTTTGGGGGCAATTTGCTTCCTTGGTCTGGAGACATGCCGTTTCCCTTGAATTCAGGTGGCCATGGCGGCTCTGCAGAGGGTCCTCTTCCTGGAATGGCTGTTTCGTCTTCTTTAACATCACAAAAGAGTTTTAACCAGTCTATGCCACATGTTGGCCAGCAAATATCTCCATTACAGAAGCATATTCAGTCACCTCAGCATTTGCCACCACCCCTCCAACAGCACCGTCAAACTTCGGCATCATACACACAAACACAAACAGTACGGCAGCTTGGTCAGGCTCAACTTCCTCATTCTGCTGGTCAAACACCGTTTAGTCAAGCATTACCGTCACAACAGTTTCTTGGCTCGGGTGGACAGTTGTCTGTTCCTCAGCCTGAGGCTCAGAAGAATGCGCCTTCTGCTACAGCACTACCAGCCCCTTTGAATATCAGCTTACAACCTCGGCCCATGCCCACTGCATCAAATCAACAGCAGCCTGGTTCTGCTCCTGCTCAGCAACAACTGATTCAGCCTCTTCAGCAGTCACCCTCTCCGTTAGCTCAGATGCTGTCGCAACAGACACAAACTCTGCAAGCAAGCTTTCAATCATCTCAGCAGGCGTTCTCCCAGCTCCAACAACAGCTGCAGCAAATGCAACCTTCAAATCAGGGGTTGGCAATGCATCAGAATCCCCAGGCTAACAAACAGCAACAGTCTCAGTGGATTGGGGTTGCATCGCATACAGTTGCCAGCACTACTGCTTCCACACCGGCGGTGGATGTGCTTTCAACCGCATCTGTTGCTCCAGCTATTCCCGGATCCCAGGCTATAGCTCCTGCAAAATGTGTTTGGACAGAGCACACCTCCCCAGATGGATACAAGTACTATTATAATAATGCAACTGGTGAAAGCAGGTGGGAGAAACCTGCCGAACTTACATTGTTTGAGCAACAGCAGCAACAAAAGGCGCCAGTTCAGCAGCCTCATGTCCCATCGCTCCCTCCAAATCGGTCTGCACAGCAAATTTCTCAAACGCAACAGCTGCATCATCAATCTCAGCTTCAACCACAGCTCCGGACTAACTTGCAGTTACAACAGCCCTCATTTTCTTCATCGTATCAGGCCTCTGGAATTATAGGTCACCAAAATGTTCAGGAAGGAAGTTATTCACAATTATCCACTCCTAGTTCAGTCGGTGATCCTTCACGCTACCAACAGGCTGCTCAGGAGTGGATGTGGAAGAATAAACCAACAGGGGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RRM_1 WW

Protein Analysis

736

Amino Acids

79.41

Weight (kDa)

9.44

Isoelectric Point (pI)

66.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	88 - 150	1.2e-15	RNA recognition motif
RRM_1	PF00076	179 - 245	9.8e-18	RNA recognition motif
WW	PF00397	599 - 624	7e-09	WW domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008816)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G16280 AT4G16280 AT4G16280 AT4G16280
fragaria_vesca	FvH4_4g20210
malus_domestica	MD13G1150500.v1.1 MD16G1150700.v1.1
prunus_persica	Prupe.1G114600_v2.0.a1 Prupe.1G114600_v2.0.a1 Prupe.1G114600_v2.0.a1 Prupe.1G114600_v2.0.a1
pyrus_communis	pycom13g12930 pycom16g12910
rosa_chinensis	RchiOBHm_Chr4g0425821
rosa_laevigata	RLG00000007337
rosa_multiflora	Rmu_sc0007063.1_g000004
rosa_roxburghii	Rroxscaffold_5G00367810
rosa_rugosa	Rorug04G0206600
rosa_samantha	Rh4AG263700 Rh4BG269600 Rh4CG282000 Rh4DG266000
rosa_wichuraiana	Rw4G022760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	395, 1836
AarI	CACCTGC	1 cut(s)	1848
Acc36I	ACCTGC	2 cut(s)	1848, 1879
AccB1I	GGYRCC	3 cut(s)	137, 143, 1912
AccB7I	CCANNNNNTGG	3 cut(s)	83, 824, 1115
AccII	CGCG	3 cut(s)	48, 105, 885
AccIII	TCCGGA	1 cut(s)	2019
AclWI	GGATC	8 cut(s)	280, 553, 761, 869, 943, 1758, 1771, 2138
AcoI	YGGCCR	2 cut(s)	1021, 1117
AcsI	RAATTY	4 cut(s)	585, 891, 1012, 1968
AcuI	CTGAAG	1 cut(s)	1466
AcyI	GRCGYC	3 cut(s)	138, 144, 1913
AdeI	CACNNNGTG	1 cut(s)	83
AfaI	GTAC	4 cut(s)	530, 671, 1227, 1829
AflIII	ACRYGT	1 cut(s)	1111
AjnI	CCWGG	9 cut(s)	174, 460, 817, 844, 949, 1051, 1441, 1638, 1767
Alw21I	GWGCWC	1 cut(s)	1806
Alw26I	GTCTC	2 cut(s)	987, 1665
AlwI	GGATC	8 cut(s)	280, 553, 761, 869, 943, 1758, 1771, 2138
AlwNI	CAGNNNCTG	1 cut(s)	1513
Ama87I	CYCGRG	1 cut(s)	1312
Aor13HI	TCCGGA	1 cut(s)	2019
AoxI	GGCC	7 cut(s)	163, 776, 848, 1021, 1117, 1409, 2067
ApaI	GGGCCC	1 cut(s)	852
ApoI	RAATTY	4 cut(s)	585, 891, 1012, 1968
Asp700I	GAANNNNTTC	2 cut(s)	303, 2110
AspA2I	CCTAGG	2 cut(s)	281, 779
AspLEI	GCGC	5 cut(s)	140, 146, 885, 1360, 1915
AsuC2I	CCSGG	1 cut(s)	1761
AsuHPI	GGTGA	7 cut(s)	512, 585, 1146, 1482, 1862, 2078, 2153
AvaI	CYCGRG	1 cut(s)	1312
AvaII	GGWCC	7 cut(s)	74, 178, 473, 800, 815, 827, 1043
AvrII	CCTAGG	2 cut(s)	281, 779
AxyI	CCTNAGG	1 cut(s)	1341
BaeGI	GKGCMC	1 cut(s)	852
BalI	TGGCCA	2 cut(s)	1023, 1119
BamHI	GGATCC	1 cut(s)	1763
BanI	GGYRCC	3 cut(s)	137, 143, 1912
BanII	GRGCYC	1 cut(s)	852
BauI	CACGAG	1 cut(s)	216
BbsI	GAAGAC	1 cut(s)	1062
Bbv12I	GWGCWC	1 cut(s)	1806
BbvCI	CCTCAGC	2 cut(s)	1158, 1335
BccI	CCATC	3 cut(s)	491, 1811, 1945
BceAI	ACGGC	2 cut(s)	985, 1244
BciT130I	CCWGG	9 cut(s)	176, 462, 819, 846, 951, 1053, 1443, 1640, 1769
BciVI	GTATCC	1 cut(s)	1814
BclI	TGATCA	2 cut(s)	351, 739
BcnI	CCSGG	1 cut(s)	1761
BcoDI	GTCTC	2 cut(s)	987, 1665
BfaI	CTAG	3 cut(s)	282, 780, 2130
BfmI	CTRYAG	4 cut(s)	1035, 1368, 1589, 1773
BfoI	RGCGCY	3 cut(s)	141, 147, 1916
BfuAI	ACCTGC	2 cut(s)	1848, 1879
BfuI	GTATCC	1 cut(s)	1814
BglI	GCCNNNNNGGC	1 cut(s)	1029
BlnI	CCTAGG	2 cut(s)	281, 779
BlpI	GCTNAGC	1 cut(s)	1458
BmcAI	AGTACT	2 cut(s)	671, 1829
Bme18I	GGWCC	7 cut(s)	74, 178, 473, 800, 815, 827, 1043
BmeT110I	CYCGRG	1 cut(s)	1312
BmsI	GCATC	8 cut(s)	919, 1211, 1433, 1500, 1636, 1688, 1748, 1999
BoxI	GACNNNNGTC	1 cut(s)	1324
BpiI	GAAGAC	1 cut(s)	1062
BplI	GAGNNNNNCTC	2 cut(s)	1793, 1825
BpmI	CTGGAG	3 cut(s)	213, 1011, 1734
Bpu10I	CCTNAGC	3 cut(s)	1158, 1335, 2169
Bpu1102I	GCTNAGC	1 cut(s)	1458
BpuMI	CCSGG	1 cut(s)	1761
BsaHI	GRCGYC	3 cut(s)	138, 144, 1913
BsaWI	WCCGGW	4 cut(s)	113, 123, 756, 2019
BsaXI	ACNNNNNCTCC	6 cut(s)	1161, 1191, 2001, 2031, 2165, 2195
Bse118I	RCCGGY	3 cut(s)	140, 146, 1714
Bse1I	ACTGG	3 cut(s)	1099, 1852, 1916
Bse21I	CCTNAGG	1 cut(s)	1341
Bse3DI	GCAATG	1 cut(s)	1629
BseAI	TCCGGA	1 cut(s)	2019
BseBI	CCWGG	9 cut(s)	176, 462, 819, 846, 951, 1053, 1443, 1640, 1769
BseGI	GGATG	5 cut(s)	659, 910, 938, 1729, 2184
BseMI	GCAATG	1 cut(s)	1629
BseNI	ACTGG	3 cut(s)	1099, 1852, 1916
BseRI	GAGGAG	1 cut(s)	69
BseSI	GKGCMC	1 cut(s)	852
BseYI	CCCAGC	1 cut(s)	1572
BsgI	GTGCAG	1 cut(s)	1944
Bsh1236I	CGCG	3 cut(s)	48, 105, 885
BshFI	GGCC	7 cut(s)	165, 778, 850, 1023, 1119, 1411, 2069
BshNI	GGYRCC	3 cut(s)	137, 143, 1912
BsiHKAI	GWGCWC	1 cut(s)	1806
BsiHKCI	CYCGRG	1 cut(s)	1312
BsiSI	CCGG	8 cut(s)	114, 124, 141, 147, 757, 1715, 1761, 2020
BslFI	GGGAC	1 cut(s)	1919
BsmAI	GTCTC	2 cut(s)	987, 1665
BsmFI	GGGAC	1 cut(s)	1919
BsmI	GAATGC	1 cut(s)	1360
BsnI	GGCC	7 cut(s)	165, 778, 850, 1023, 1119, 1411, 2069
BsoBI	CYCGRG	1 cut(s)	1312
Bsp120I	GGGCCC	1 cut(s)	848
Bsp1286I	GDGCHC	2 cut(s)	852, 1806
Bsp13I	TCCGGA	1 cut(s)	2019
Bsp1720I	GCTNAGC	1 cut(s)	1458
Bsp19I	CCATGG	1 cut(s)	1024
Bsp68I	TCGCGA	1 cut(s)	105
BspANI	GGCC	7 cut(s)	165, 778, 850, 1023, 1119, 1411, 2069
BspEI	TCCGGA	1 cut(s)	2019
BspFNI	CGCG	3 cut(s)	48, 105, 885
BspMAI	CTGCAG	2 cut(s)	1039, 1593
BspMI	ACCTGC	2 cut(s)	1848, 1879
BspPI	GGATC	8 cut(s)	280, 553, 761, 869, 943, 1758, 1771, 2138
BspT107I	GGYRCC	3 cut(s)	137, 143, 1912
BsrDI	GCAATG	1 cut(s)	1629
BsrFI	RCCGGY	3 cut(s)	140, 146, 1714
BsrI	ACTGG	3 cut(s)	1099, 1852, 1916
BssAI	RCCGGY	3 cut(s)	140, 146, 1714
BssNI	GRCGYC	3 cut(s)	138, 144, 1913
BssSI	CACGAG	1 cut(s)	216
BssT1I	CCWWGG	5 cut(s)	281, 514, 779, 983, 1024
Bst2BI	CACGAG	1 cut(s)	216
Bst2UI	CCWGG	9 cut(s)	176, 462, 819, 846, 951, 1053, 1443, 1640, 1769
Bst6I	CTCTTC	4 cut(s)	115, 462, 1053, 1485
BstACI	GRCGYC	3 cut(s)	138, 144, 1913
BstAPI	GCANNNNNTGC	3 cut(s)	1597, 1745, 1987
BstC8I	GCNNGC	7 cut(s)	142, 148, 1121, 1539, 1543, 1563, 1696
BstDSI	CCRYGG	2 cut(s)	82, 1024
BstEII	GGTNACC	1 cut(s)	2084
BstF5I	GGATG	5 cut(s)	659, 910, 938, 1729, 2184
BstFNI	CGCG	3 cut(s)	48, 105, 885
BstH2I	RGCGCY	3 cut(s)	141, 147, 1916
BstHHI	GCGC	5 cut(s)	140, 146, 885, 1360, 1915
BstMAI	GTCTC	2 cut(s)	987, 1665
BstNI	CCWGG	9 cut(s)	176, 462, 819, 846, 951, 1053, 1443, 1640, 1769
BstNSI	RCATGY	2 cut(s)	1000, 1115
BstPAI	GACNNNNGTC	1 cut(s)	1324
BstPI	GGTNACC	1 cut(s)	2084
BstSFI	CTRYAG	4 cut(s)	1035, 1368, 1589, 1773
BstSLI	GKGCMC	1 cut(s)	852
BstUI	CGCG	3 cut(s)	48, 105, 885
BstV2I	GAAGAC	1 cut(s)	1062
BstX2I	RGATCY	1 cut(s)	1763
BstYI	RGATCY	1 cut(s)	1763
Bsu36I	CCTNAGG	1 cut(s)	1341
BsuI	GTATCC	1 cut(s)	1814
BsuRI	GGCC	7 cut(s)	165, 778, 850, 1023, 1119, 1411, 2069
BtgI	CCRYGG	2 cut(s)	82, 1024
BtgZI	GCGATG	2 cut(s)	1665, 1923
BtsCI	GGATG	5 cut(s)	659, 910, 938, 1729, 2184
BtsI	GCAGTG	1 cut(s)	1419
BtsIMutI	CAGTG	3 cut(s)	548, 1419, 1670
BtuMI	TCGCGA	1 cut(s)	105
BveI	ACCTGC	2 cut(s)	1848, 1879
Cac8I	GCNNGC	7 cut(s)	142, 148, 1121, 1539, 1543, 1563, 1696
CaiI	CAGNNNCTG	1 cut(s)	1513
CfoI	GCGC	5 cut(s)	140, 146, 885, 1360, 1915
Cfr10I	RCCGGY	3 cut(s)	140, 146, 1714
Csp6I	GTAC	4 cut(s)	529, 670, 1226, 1828
CviAII	CATG	7 cut(s)	326, 625, 997, 1025, 1112, 1414, 1931
CviQI	GTAC	4 cut(s)	529, 670, 1226, 1828
DinI	GGCGCC	3 cut(s)	139, 145, 1914
DraIII	CACNNNGTG	1 cut(s)	83
EaeI	YGGCCR	2 cut(s)	1021, 1117
Eam1104I	CTCTTC	4 cut(s)	115, 462, 1053, 1485
EarI	CTCTTC	4 cut(s)	115, 462, 1053, 1485
EciI	GGCGGA	1 cut(s)	66
Eco130I	CCWWGG	5 cut(s)	281, 514, 779, 983, 1024
Eco147I	AGGCCT	2 cut(s)	778, 2069
Eco24I	GRGCYC	1 cut(s)	852
Eco47I	GGWCC	7 cut(s)	74, 178, 473, 800, 815, 827, 1043
Eco57I	CTGAAG	1 cut(s)	1466
Eco81I	CCTNAGG	1 cut(s)	1341
Eco88I	CYCGRG	1 cut(s)	1312
Eco91I	GGTNACC	1 cut(s)	2084
EcoO109I	RGGNCCY	5 cut(s)	178, 473, 800, 848, 1043
EcoO65I	GGTNACC	1 cut(s)	2084
EcoRI	GAATTC	1 cut(s)	1012
EcoRII	CCWGG	9 cut(s)	174, 460, 817, 844, 949, 1051, 1441, 1638, 1767
EcoT14I	CCWWGG	5 cut(s)	281, 514, 779, 983, 1024
EcoT22I	ATGCAT	1 cut(s)	1629
EcoT38I	GRGCYC	1 cut(s)	852
EgeI	GGCGCC	3 cut(s)	139, 145, 1914
EheI	GGCGCC	3 cut(s)	139, 145, 1914
ErhI	CCWWGG	5 cut(s)	281, 514, 779, 983, 1024
FaeI	CATG	7 cut(s)	329, 628, 1000, 1028, 1115, 1417, 1934
FaqI	GGGAC	1 cut(s)	1919
FatI	CATG	7 cut(s)	325, 624, 996, 1024, 1111, 1413, 1930
FauI	CCCGC	1 cut(s)	105
FbaI	TGATCA	2 cut(s)	351, 739
FokI	GGATG	5 cut(s)	666, 897, 925, 1736, 2191
FriOI	GRGCYC	1 cut(s)	852
FspBI	CTAG	3 cut(s)	282, 780, 2130
GlaI	GCGC	5 cut(s)	139, 145, 884, 1359, 1914
GsaI	CCCAGC	1 cut(s)	1576
GsuI	CTGGAG	3 cut(s)	213, 1011, 1734
HaeII	RGCGCY	3 cut(s)	141, 147, 1916
HaeIII	GGCC	7 cut(s)	165, 778, 850, 1023, 1119, 1411, 2069
HapII	CCGG	8 cut(s)	114, 124, 141, 147, 757, 1715, 1761, 2020
HhaI	GCGC	5 cut(s)	140, 146, 885, 1360, 1915
Hin1I	GRCGYC	3 cut(s)	138, 144, 1913
Hin1II	CATG	7 cut(s)	329, 628, 1000, 1028, 1115, 1417, 1934
Hin6I	GCGC	5 cut(s)	138, 144, 883, 1358, 1913
HinP1I	GCGC	5 cut(s)	138, 144, 883, 1358, 1913
HindIII	AAGCTT	1 cut(s)	1543
HinfI	GANTC	6 cut(s)	107, 646, 791, 919, 1471, 1633
HpaII	CCGG	8 cut(s)	114, 124, 141, 147, 757, 1715, 1761, 2020
HphI	GGTGA	7 cut(s)	512, 585, 1146, 1482, 1862, 2078, 2153
Hpy166II	GTNNAC	5 cut(s)	77, 503, 619, 923, 1319
Hpy188I	TCNGA	7 cut(s)	201, 351, 412, 488, 1350, 1509, 1632
Hpy188III	TCNNGA	7 cut(s)	104, 230, 990, 2020, 2073, 2099, 2171
Hpy8I	GTNNAC	5 cut(s)	77, 503, 619, 923, 1319
HpyAV	CCTTC	4 cut(s)	1371, 1614, 2096, 2157
Hsp92I	GRCGYC	3 cut(s)	138, 144, 1913
Hsp92II	CATG	7 cut(s)	329, 628, 1000, 1028, 1115, 1417, 1934
HspAI	GCGC	5 cut(s)	138, 144, 883, 1358, 1913
KasI	GGCGCC	3 cut(s)	137, 143, 1912
Kpn2I	TCCGGA	1 cut(s)	2019
KroI	GCCGGC	2 cut(s)	140, 146
KroNI	GCCGGC	2 cut(s)	142, 148
Ksp22I	TGATCA	2 cut(s)	351, 739
LmnI	GCTCC	6 cut(s)	1456, 1581, 1753, 1783, 1947, 2022
LweI	GCATC	8 cut(s)	919, 1211, 1433, 1500, 1636, 1688, 1748, 1999
MaeI	CTAG	3 cut(s)	282, 780, 2130
MaeIII	GTNAC	5 cut(s)	1152, 1293, 1488, 2034, 2084
MflI	RGATCY	1 cut(s)	1763
MhlI	GDGCHC	2 cut(s)	852, 1806
MlsI	TGGCCA	2 cut(s)	1023, 1119
MluNI	TGGCCA	2 cut(s)	1023, 1119
Mly113I	GGCGCC	3 cut(s)	138, 144, 1913
MlyI	GAGTC	3 cut(s)	101, 655, 928
MmeI	TCCRAC	3 cut(s)	920, 1204, 1603
Mox20I	TGGCCA	2 cut(s)	1023, 1119
Mph1103I	ATGCAT	1 cut(s)	1629
MreI	CGCCGGCG	2 cut(s)	140, 146
MroI	TCCGGA	1 cut(s)	2019
MroNI	GCCGGC	2 cut(s)	140, 146
MroXI	GAANNNNTTC	2 cut(s)	303, 2110
MscI	TGGCCA	2 cut(s)	1023, 1119
MseI	TTAA	3 cut(s)	711, 1076, 1095
MslI	CAYNNNNRTG	1 cut(s)	2091
Msp20I	TGGCCA	2 cut(s)	1023, 1119
MspA1I	CMGCKG	2 cut(s)	1588, 1987
MspI	CCGG	8 cut(s)	114, 124, 141, 147, 757, 1715, 1761, 2020
Mva1269I	GAATGC	1 cut(s)	1360
MvaI	CCWGG	9 cut(s)	176, 462, 819, 846, 951, 1053, 1443, 1640, 1769
MvnI	CGCG	3 cut(s)	48, 105, 885
NaeI	GCCGGC	2 cut(s)	142, 148
NarI	GGCGCC	3 cut(s)	138, 144, 1913
NciI	CCSGG	1 cut(s)	1761
NcoI	CCATGG	1 cut(s)	1024
NgoMIV	GCCGGC	2 cut(s)	140, 146
NlaIII	CATG	7 cut(s)	329, 628, 1000, 1028, 1115, 1417, 1934
NmeAIII	GCCGAG	1 cut(s)	1387
NmuCI	GTSAC	4 cut(s)	1152, 1293, 1488, 2084
NruI	TCGCGA	1 cut(s)	105
NsiI	ATGCAT	1 cut(s)	1629
NspI	RCATGY	2 cut(s)	1000, 1115
PaqCI	CACCTGC	1 cut(s)	1848
PasI	CCCWGGG	1 cut(s)	845
PceI	AGGCCT	2 cut(s)	778, 2069
PciI	ACATGT	1 cut(s)	1111
PctI	GAATGC	1 cut(s)	1360
PdiI	GCCGGC	2 cut(s)	142, 148
PdmI	GAANNNNTTC	2 cut(s)	303, 2110
PfeI	GAWTC	3 cut(s)	791, 1471, 1633
PflMI	CCANNNNNTGG	3 cut(s)	83, 824, 1115
PfoI	TCCNGGA	2 cut(s)	1051, 1759
PleI	GAGTC	3 cut(s)	101, 654, 927
PluTI	GGCGCC	3 cut(s)	141, 147, 1916
PpsI	GAGTC	3 cut(s)	101, 654, 927
PpuMI	RGGWCCY	4 cut(s)	178, 473, 800, 1043
PscI	ACATGT	1 cut(s)	1111
PshAI	GACNNNNGTC	1 cut(s)	1324
PsiI	TTATAA	2 cut(s)	395, 1836
Psp5II	RGGWCCY	4 cut(s)	178, 473, 800, 1043
Psp6I	CCWGG	9 cut(s)	174, 460, 817, 844, 949, 1051, 1441, 1638, 1767
PspEI	GGTNACC	1 cut(s)	2084
PspFI	CCCAGC	1 cut(s)	1572
PspGI	CCWGG	9 cut(s)	174, 460, 817, 844, 949, 1051, 1441, 1638, 1767
PspOMI	GGGCCC	1 cut(s)	848
PspPPI	RGGWCCY	4 cut(s)	178, 473, 800, 1043
PstI	CTGCAG	2 cut(s)	1039, 1593
PstNI	CAGNNNCTG	1 cut(s)	1513
PsuI	RGATCY	1 cut(s)	1763
PvuII	CAGCTG	2 cut(s)	1588, 1987
RruI	TCGCGA	1 cut(s)	105
RsaI	GTAC	4 cut(s)	530, 671, 1227, 1829
RsaNI	GTAC	4 cut(s)	529, 670, 1226, 1828
RseI	CAYNNNNRTG	1 cut(s)	2091
SaqAI	TTAA	3 cut(s)	711, 1076, 1095
ScaI	AGTACT	2 cut(s)	671, 1829
SchI	GAGTC	3 cut(s)	101, 655, 928
SduI	GDGCHC	2 cut(s)	852, 1806
SfaNI	GCATC	8 cut(s)	919, 1211, 1433, 1500, 1636, 1688, 1748, 1999
SfcI	CTRYAG	4 cut(s)	1035, 1368, 1589, 1773
SfoI	GGCGCC	3 cut(s)	139, 145, 1914
SgrAI	CRCCGGYG	3 cut(s)	140, 146, 1714
SinI	GGWCC	7 cut(s)	74, 178, 473, 800, 815, 827, 1043
SmiMI	CAYNNNNRTG	1 cut(s)	2091
SseBI	AGGCCT	2 cut(s)	778, 2069
SspDI	GGCGCC	3 cut(s)	137, 143, 1912
SspMI	CTAG	3 cut(s)	282, 780, 2130
StuI	AGGCCT	2 cut(s)	778, 2069
StyI	CCWWGG	5 cut(s)	281, 514, 779, 983, 1024
TaqI	TCGA	3 cut(s)	90, 240, 832
TaqII	GACCGA	1 cut(s)	1944
TatI	WGTACW	3 cut(s)	528, 669, 1827
TauI	GCSGC	3 cut(s)	30, 51, 1032
TfiI	GAWTC	3 cut(s)	791, 1471, 1633
Tru1I	TTAA	3 cut(s)	711, 1076, 1095
Tru9I	TTAA	3 cut(s)	711, 1076, 1095
TscAI	CASTG	3 cut(s)	555, 1426, 1670
TseFI	GTSAC	4 cut(s)	1152, 1293, 1488, 2084
Tsp45I	GTSAC	4 cut(s)	1152, 1293, 1488, 2084
TspDTI	ATGAA	3 cut(s)	17, 648, 2046
TspGWI	ACGGA	2 cut(s)	581, 1488
TspRI	CASTG	3 cut(s)	555, 1426, 1670
Van91I	CCANNNNNTGG	3 cut(s)	83, 824, 1115
VpaK11BI	GGWCC	7 cut(s)	74, 178, 473, 800, 815, 827, 1043
XapI	RAATTY	4 cut(s)	585, 891, 1012, 1968
XceI	RCATGY	2 cut(s)	1000, 1115
XcmI	CCANNNNNNNNNTGG	2 cut(s)	903, 1717
XmaJI	CCTAGG	2 cut(s)	281, 779
XmnI	GAANNNNTTC	2 cut(s)	303, 2110
XspI	CTAG	3 cut(s)	282, 780, 2130
ZrmI	AGTACT	2 cut(s)	671, 1829
Zsp2I	ATGCAT	1 cut(s)	1629

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.