Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4B

Orthogroup ID

OG0008816

Physical Location & Seq

Genomic Coordinates Reverse (-)

44365041 .. 44376268

Gene Structure 11228 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4BG269600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2037 bp

ATGCCCGCCGGACCCGCTGCCGGTGCCGGAGGGTTTCGCCCTTCCCACCCCGACCCTCCGCCGCTCTCCGGTCAGAAACGAGGCCATCCTTTCTCTGCCCGTGGTGGCTCTCCAGATCGTTTTGATAGAGGAGGGTTTGCCAAGCTTTTCGTTGGATCAGTTCCGAGGACAGCCACTGAGGGAGAGATTCGCCCTTTGTTTGAAGAACATGGAGAAGTGGTAGAGGTTGCACTGATCAAAGACAAGAAAACAGGACTGCAGCAAGGTTGTTGTTTTATTAAATATGCAACCTCAGAAGAAGCTGATAGGGCCATTAGAGCTTTGCATAATCAACATACTCTTCCTGGGGGAGTAGGTCCTATCCAAGTCAGATATGCTGATGGGGAACGAGAACGCCTTGGTGCAGTTGAGTACAAACTGTTTGTGGGCTCACTGAACAAACAAGCTACGGAAAAGGAAGTTGAGGAAATTTTTTCACCATATGGTCTAGTTGAAGATGTTTACCTCATGCGTGATGAATTGAAGCAGAGTCGTGGATGTGGATTCGTTAAGTATTCCCACCGAGATATGGCGTTGTCAGCAATAAATGGTCTAAACGGGCGCTACACTATGAGAGGTTGTGAGCAACCACTAACTGTCCGGTTTGCTGATCCTAAAAGGCCTAGGCCTGGAGAATCAAGGGGTCCTTCTTTTGGAGGTCCAGGTTTTGGTCCTCGGTTTCAAAGCCCAGGGGCCAGACCAGTACCTAACTTTGGTGATCCTACAAGTGATCAAATTCCAACCAATGCTTGGCATCCAATTAGTCCACCAAACTTGGTGCCATCCCCCAATCCTGGTATTCGTGGCTTCGGGGCCCATTTGCTTCCTAGGTCTGGAGACATGGGACCCTTTAATTCAGGCGGCCATGGCAGCTCTGTAGAGGGTCCACATCCTGTGATGGCAGTTTCATCTCAAACAACACAGCAGAATCTTAACCAGTCGATGCCACATATGGGCCAGCAAATTTCCCCATTACAGAAGCATAATCAGTCACCTCAGCATTTGCCACCTTCCCTTCATCAGCACCCTCAAACTCCAGCACCCTACGCACTCACACAAACAGCACGGCAGGTTGGTCAACCACAGCTTCCTCCTTCTGCTGGCCAAACACCATTTAATCAAGCTTTACCATCACAAAGGTTACATGGGTTGGGCGGACAGCTGTCGGCCTCTCAGCCTGAGGTCCAGCAGAATGCATCATCTGCTCCTGCATTACCAACCCTTTTGAATATCAACTTAAAATCCCATTCGATGTCCGCAACAAATCAACAGCAACGTCCTTCTGCTCCTGTTCAACAACAACTTCAAACGCTTCAGCAGTCTCCTTCTCAGTTAGCTCAGATGCTGTCGCAACAGACACAAACTTTGCAGGCAAGCTTTCAATCGTCTCAGCAGGCATTCTCGCAGCTGCAACAACAGGTGCAGCAAATGCAACCATCAAATCAGGGTCTGTCGCTGCATCAGACTTCCCAGTCCAATAAACAGCAGCAGTCTCAGTGGAATGGAATAGTACCACAGACAGTTGCAAATACCCCTGCTACAACACCAGCTGCAGATGTGCCTTCAGCCACATCTGTTGCTCCTGCTATACCTGTAACAAACCAGACTATAACTCCTGCAAAATGTATTTGGACAGAGCACACCTCCCCGGATGGATACAAGTACTATTATAATAGTGCAACTGGTGAAAGCAGGTGGGAAAAACCTGCCGAACTTGCATTGTTTGAGCAACAGCAGCACCACCAAAAGACATCAGTTCAGCAGCCTCAGACCCCTTCACTACCTCAAAATGTATCTGCGCAGCAGCAAGCTTCTCAAACACAACAGATGCATCTTCAATCTCATCTTCATCCACAGCCTCGGCCCAATCTTCAGTCGCAACAGCCATCTTTGTCTTCAACGTACCAGGCTTCTGGAATTGTAGGCCAACAAAATGCTCAGGTAAATTCTGATTCACTGCGAAAATTTCATATTCAGAAAATATTTGCAATGGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RRM_1 WW

Protein Analysis

678

Amino Acids

73.57

Weight (kDa)

9.3

Isoelectric Point (pI)

64.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	49 - 111	3.4e-15	RNA recognition motif
RRM_1	PF00076	140 - 207	5.5e-17	RNA recognition motif
WW	PF00397	557 - 582	1.5e-09	WW domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008816)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G16280 AT4G16280 AT4G16280 AT4G16280
fragaria_vesca	FvH4_4g20210
malus_domestica	MD13G1150500.v1.1 MD16G1150700.v1.1
prunus_persica	Prupe.1G114600_v2.0.a1 Prupe.1G114600_v2.0.a1 Prupe.1G114600_v2.0.a1 Prupe.1G114600_v2.0.a1
pyrus_communis	pycom13g12930 pycom16g12910
rosa_chinensis	RchiOBHm_Chr4g0425821
rosa_laevigata	RLG00000007337
rosa_multiflora	Rmu_sc0007063.1_g000004
rosa_roxburghii	Rroxscaffold_5G00367810
rosa_rugosa	Rorug04G0206600
rosa_samantha	Rh4AG263700 Rh4BG269600 Rh4CG282000 Rh4DG266000
rosa_wichuraiana	Rw4G022760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1710
AarI	CACCTGC	1 cut(s)	1722
AasI	GACNNNNNNGTC	1 cut(s)	1510
Acc16I	TGCGCA	1 cut(s)	1839
Acc36I	ACCTGC	3 cut(s)	1099, 1722, 1753
AccB1I	GGYRCC	2 cut(s)	23, 817
AccB7I	CCANNNNNTGG	2 cut(s)	707, 789
AccBSI	CCGCTC	1 cut(s)	64
AciI	CCGC	7 cut(s)	6, 15, 59, 62, 900, 1194, 1296
AclWI	GGATC	3 cut(s)	163, 644, 752
AcoI	YGGCCR	2 cut(s)	901, 1141
AcsI	RAATTY	5 cut(s)	468, 774, 1002, 1984, 2003
AcuI	CTGAAG	3 cut(s)	1337, 1587, 1895
AfaI	GTAC	5 cut(s)	413, 744, 1551, 1703, 1943
AjnI	CCWGG	6 cut(s)	343, 667, 700, 727, 832, 1944
Alw21I	GWGCWC	1 cut(s)	1680
Alw26I	GTCTC	4 cut(s)	870, 1365, 1431, 1536
AlwI	GGATC	3 cut(s)	163, 644, 752
AlwNI	CAGNNNCTG	3 cut(s)	176, 1384, 1489
ApaI	GGGCCC	1 cut(s)	856
ApoI	RAATTY	5 cut(s)	468, 774, 1002, 1984, 2003
ArsI	GACNNNNNNTTYG	2 cut(s)	1387, 1419
AspA2I	CCTAGG	2 cut(s)	662, 866
AspLEI	GCGC	2 cut(s)	603, 1840
AsuC2I	CCSGG	1 cut(s)	1688
AsuHPI	GGTGA	4 cut(s)	468, 767, 1023, 1736
AvaII	GGWCC	8 cut(s)	11, 356, 683, 698, 710, 884, 923, 1222
AvrII	CCTAGG	2 cut(s)	662, 866
AxyI	CCTNAGG	1 cut(s)	1218
BaeGI	GKGCMC	1 cut(s)	856
BalI	TGGCCA	1 cut(s)	1143
BanI	GGYRCC	2 cut(s)	23, 817
BanII	GRGCYC	2 cut(s)	431, 856
BbsI	GAAGAC	1 cut(s)	1926
Bbv12I	GWGCWC	1 cut(s)	1680
BbvCI	CCTCAGC	1 cut(s)	1035
BccI	CCATC	8 cut(s)	93, 374, 829, 931, 1177, 1483, 1685, 1933
BceAI	ACGGC	1 cut(s)	1121
BciT130I	CCWGG	6 cut(s)	345, 669, 702, 729, 834, 1946
BciVI	GTATCC	1 cut(s)	1688
BclI	TGATCA	2 cut(s)	234, 769
BcnI	CCSGG	1 cut(s)	1688
BcoDI	GTCTC	4 cut(s)	870, 1365, 1431, 1536
BfaI	CTAG	3 cut(s)	488, 663, 867
BfmI	CTRYAG	3 cut(s)	257, 915, 1590
BfoI	RGCGCY	1 cut(s)	604
BfuAI	ACCTGC	3 cut(s)	1099, 1722, 1753
BfuI	GTATCC	1 cut(s)	1688
BlnI	CCTAGG	2 cut(s)	662, 866
BmcAI	AGTACT	1 cut(s)	1703
Bme1390I	CCNGG	7 cut(s)	345, 669, 702, 729, 834, 1688, 1946
Bme18I	GGWCC	8 cut(s)	11, 356, 683, 698, 710, 884, 923, 1222
BmrFI	CCNGG	7 cut(s)	345, 669, 702, 729, 834, 1688, 1946
BmrI	ACTGGG	1 cut(s)	1504
BmsI	GCATC	7 cut(s)	802, 972, 1244, 1371, 1507, 1857, 1879
BmuI	ACTGGG	1 cut(s)	1504
BoxI	GACNNNNGTC	1 cut(s)	1201
BpiI	GAAGAC	1 cut(s)	1926
BplI	GAGNNNNNCTC	2 cut(s)	1667, 1699
BpmI	CTGGAG	4 cut(s)	96, 690, 894, 1059
Bpu10I	CCTNAGC	2 cut(s)	1035, 1977
BpuMI	CCSGG	1 cut(s)	1688
BsaWI	WCCGGW	2 cut(s)	68, 639
BsaXI	ACNNNNNCTCC	4 cut(s)	204, 234, 1636, 1666
Bse118I	RCCGGY	1 cut(s)	20
Bse1I	ACTGG	4 cut(s)	740, 976, 1510, 1726
Bse21I	CCTNAGG	1 cut(s)	1218
Bse3DI	GCAATG	1 cut(s)	2034
BseBI	CCWGG	6 cut(s)	345, 669, 702, 729, 834, 1946
BseGI	GGATG	7 cut(s)	85, 542, 793, 821, 928, 1696, 1888
BseMI	GCAATG	1 cut(s)	2034
BseNI	ACTGG	4 cut(s)	740, 976, 1510, 1726
BseRI	GAGGAG	1 cut(s)	144
BseSI	GKGCMC	1 cut(s)	856
BsgI	GTGCAG	2 cut(s)	423, 1481
BshNI	GGYRCC	2 cut(s)	23, 817
BsiHKAI	GWGCWC	1 cut(s)	1680
BsiSI	CCGG	6 cut(s)	9, 21, 27, 69, 640, 1688
BslFI	GGGAC	1 cut(s)	897
BsmAI	GTCTC	4 cut(s)	870, 1365, 1431, 1536
BsmBI	CGTCTC	1 cut(s)	1431
BsmFI	GGGAC	1 cut(s)	897
BsmI	GAATGC	2 cut(s)	1237, 1436
Bsp120I	GGGCCC	1 cut(s)	852
Bsp1286I	GDGCHC	3 cut(s)	431, 856, 1680
Bsp143I	GATC	6 cut(s)	115, 155, 234, 649, 757, 769
Bsp19I	CCATGG	1 cut(s)	904
BspACI	CCGC	7 cut(s)	6, 15, 59, 62, 900, 1194, 1296
BspMAI	CTGCAG	2 cut(s)	261, 1594
BspMI	ACCTGC	3 cut(s)	1099, 1722, 1753
BspPI	GGATC	3 cut(s)	163, 644, 752
BspT107I	GGYRCC	2 cut(s)	23, 817
BsrBI	CCGCTC	1 cut(s)	64
BsrDI	GCAATG	1 cut(s)	2034
BsrFI	RCCGGY	1 cut(s)	20
BsrI	ACTGG	4 cut(s)	740, 976, 1510, 1726
BssAI	RCCGGY	1 cut(s)	20
BssMI	GATC	6 cut(s)	115, 155, 234, 649, 757, 769
BssT1I	CCWWGG	4 cut(s)	397, 662, 866, 904
Bst2UI	CCWGG	6 cut(s)	345, 669, 702, 729, 834, 1946
Bst4CI	ACNGT	3 cut(s)	420, 637, 1561
Bst6I	CTCTTC	1 cut(s)	345
BstAPI	GCANNNNNTGC	2 cut(s)	1241, 1468
BstC8I	GCNNGC	7 cut(s)	6, 998, 1141, 1410, 1414, 1434, 1848
BstDSI	CCRYGG	2 cut(s)	100, 904
BstF5I	GGATG	7 cut(s)	85, 542, 793, 821, 928, 1696, 1888
BstH2I	RGCGCY	1 cut(s)	604
BstHHI	GCGC	2 cut(s)	603, 1840
BstKTI	GATC	6 cut(s)	118, 158, 237, 652, 760, 772
BstMAI	GTCTC	4 cut(s)	870, 1365, 1431, 1536
BstMBI	GATC	6 cut(s)	115, 155, 234, 649, 757, 769
BstNI	CCWGG	6 cut(s)	345, 669, 702, 729, 834, 1946
BstPAI	GACNNNNGTC	1 cut(s)	1201
BstSCI	CCNGG	7 cut(s)	343, 667, 700, 727, 832, 1686, 1944
BstSFI	CTRYAG	3 cut(s)	257, 915, 1590
BstSLI	GKGCMC	1 cut(s)	856
BstV2I	GAAGAC	1 cut(s)	1926
BstXI	CCANNNNNNTGG	1 cut(s)	1952
Bsu36I	CCTNAGG	1 cut(s)	1218
BsuI	GTATCC	1 cut(s)	1688
BtgI	CCRYGG	2 cut(s)	100, 904
BtsCI	GGATG	7 cut(s)	85, 542, 793, 821, 928, 1696, 1888
BtsI	GCAGTG	1 cut(s)	1994
BtsIMutI	CAGTG	5 cut(s)	174, 230, 431, 1541, 1994
BveI	ACCTGC	3 cut(s)	1099, 1722, 1753
Cac8I	GCNNGC	7 cut(s)	6, 998, 1141, 1410, 1414, 1434, 1848
CaiI	CAGNNNCTG	3 cut(s)	176, 1384, 1489
CfoI	GCGC	2 cut(s)	603, 1840
Cfr10I	RCCGGY	1 cut(s)	20
Csp6I	GTAC	5 cut(s)	412, 743, 1550, 1702, 1942
CspCI	CAANNNNNGTGG	4 cut(s)	795, 830, 1597, 1632
CviAII	CATG	5 cut(s)	209, 508, 880, 905, 1184
CviQI	GTAC	5 cut(s)	412, 743, 1550, 1702, 1942
DpnI	GATC	6 cut(s)	117, 157, 236, 651, 759, 771
DpnII	GATC	6 cut(s)	115, 155, 234, 649, 757, 769
DrdI	GACNNNNNNGTC	1 cut(s)	1510
DseDI	GACNNNNNNGTC	1 cut(s)	1510
EaeI	YGGCCR	2 cut(s)	901, 1141
Eam1104I	CTCTTC	1 cut(s)	345
EarI	CTCTTC	1 cut(s)	345
EciI	GGCGGA	2 cut(s)	48, 1209
Eco130I	CCWWGG	4 cut(s)	397, 662, 866, 904
Eco147I	AGGCCT	2 cut(s)	661, 667
Eco24I	GRGCYC	2 cut(s)	431, 856
Eco47I	GGWCC	8 cut(s)	11, 356, 683, 698, 710, 884, 923, 1222
Eco57I	CTGAAG	3 cut(s)	1337, 1587, 1895
Eco81I	CCTNAGG	1 cut(s)	1218
EcoO109I	RGGNCCY	4 cut(s)	356, 683, 852, 884
EcoRII	CCWGG	6 cut(s)	343, 667, 700, 727, 832, 1944
EcoT14I	CCWWGG	4 cut(s)	397, 662, 866, 904
EcoT22I	ATGCAT	2 cut(s)	1237, 1872
EcoT38I	GRGCYC	2 cut(s)	431, 856
ErhI	CCWWGG	4 cut(s)	397, 662, 866, 904
Esp3I	CGTCTC	1 cut(s)	1431
FaeI	CATG	5 cut(s)	212, 511, 883, 908, 1187
FalI	AAGNNNNNCTT	2 cut(s)	670, 702
FaqI	GGGAC	1 cut(s)	897
FatI	CATG	5 cut(s)	208, 507, 879, 904, 1183
FauI	CCCGC	2 cut(s)	13, 22
FauNDI	CATATG	2 cut(s)	481, 990
FbaI	TGATCA	2 cut(s)	234, 769
FokI	GGATG	7 cut(s)	72, 549, 780, 808, 915, 1703, 1875
FriOI	GRGCYC	2 cut(s)	431, 856
FspBI	CTAG	3 cut(s)	488, 663, 867
FspI	TGCGCA	1 cut(s)	1839
GlaI	GCGC	2 cut(s)	602, 1839
GsuI	CTGGAG	4 cut(s)	96, 690, 894, 1059
HaeII	RGCGCY	1 cut(s)	604
HapII	CCGG	6 cut(s)	9, 21, 27, 69, 640, 1688
HhaI	GCGC	2 cut(s)	603, 1840
Hin1II	CATG	5 cut(s)	212, 511, 883, 908, 1187
Hin6I	GCGC	2 cut(s)	601, 1838
HinP1I	GCGC	2 cut(s)	601, 1838
HincII	GTYRAC	1 cut(s)	1118
HindII	GTYRAC	1 cut(s)	1118
HindIII	AAGCTT	4 cut(s)	143, 1161, 1414, 1848
HinfI	GANTC	6 cut(s)	187, 529, 543, 674, 967, 1991
HpaII	CCGG	6 cut(s)	9, 21, 27, 69, 640, 1688
HphI	GGTGA	4 cut(s)	468, 767, 1023, 1736
Hpy166II	GTNNAC	4 cut(s)	502, 806, 926, 1118
Hpy188I	TCNGA	9 cut(s)	75, 165, 295, 371, 1380, 1503, 1809, 1990, 2016
Hpy188III	TCNNGA	3 cut(s)	113, 873, 1953
Hpy8I	GTNNAC	4 cut(s)	502, 806, 926, 1118
HpyAV	CCTTC	9 cut(s)	51, 696, 1059, 1064, 1143, 1329, 1374, 1611, 1824
HpyCH4III	ACNGT	3 cut(s)	420, 637, 1561
HpyCH4IV	ACGT	2 cut(s)	1315, 1940
HpySE526I	ACGT	2 cut(s)	1315, 1940
Hsp92II	CATG	5 cut(s)	212, 511, 883, 908, 1187
HspAI	GCGC	2 cut(s)	601, 1838
KflI	GGGWCCC	1 cut(s)	884
Ksp22I	TGATCA	2 cut(s)	234, 769
Kzo9I	GATC	6 cut(s)	115, 155, 234, 649, 757, 769
LmnI	GCTCC	3 cut(s)	1249, 1330, 1624
LweI	GCATC	7 cut(s)	802, 972, 1244, 1371, 1507, 1857, 1879
MaeI	CTAG	3 cut(s)	488, 663, 867
MaeII	ACGT	2 cut(s)	1315, 1940
MaeIII	GTNAC	3 cut(s)	1029, 1179, 1633
MalI	GATC	6 cut(s)	117, 157, 236, 651, 759, 771
MbiI	CCGCTC	1 cut(s)	64
MboI	GATC	6 cut(s)	115, 155, 234, 649, 757, 769
MboII	GAAGA	8 cut(s)	215, 308, 332, 506, 1865, 1877, 1901, 1926
MhlI	GDGCHC	3 cut(s)	431, 856, 1680
MlsI	TGGCCA	1 cut(s)	1143
MluCI	AATT	9 cut(s)	468, 518, 774, 798, 892, 1002, 1956, 1984, 2003
MluNI	TGGCCA	1 cut(s)	1143
MlyI	GAGTC	1 cut(s)	538
MmeI	TCCRAC	2 cut(s)	133, 803
Mox20I	TGGCCA	1 cut(s)	1143
Mph1103I	ATGCAT	2 cut(s)	1237, 1872
MscI	TGGCCA	1 cut(s)	1143
MseI	TTAA	6 cut(s)	279, 549, 891, 972, 1155, 1277
Msp20I	TGGCCA	1 cut(s)	1143
MspA1I	CMGCKG	4 cut(s)	17, 1201, 1447, 1589
MspI	CCGG	6 cut(s)	9, 21, 27, 69, 640, 1688
MspR9I	CCNGG	7 cut(s)	345, 669, 702, 729, 834, 1688, 1946
Mva1269I	GAATGC	2 cut(s)	1237, 1436
MvaI	CCWGG	6 cut(s)	345, 669, 702, 729, 834, 1946
NciI	CCSGG	1 cut(s)	1688
NcoI	CCATGG	1 cut(s)	904
NdeI	CATATG	2 cut(s)	481, 990
NdeII	GATC	6 cut(s)	115, 155, 234, 649, 757, 769
NlaIII	CATG	5 cut(s)	212, 511, 883, 908, 1187
NmeAIII	GCCGAG	1 cut(s)	1879
NmuCI	GTSAC	1 cut(s)	1029
NsbI	TGCGCA	1 cut(s)	1839
NsiI	ATGCAT	2 cut(s)	1237, 1872
PaqCI	CACCTGC	1 cut(s)	1722
PasI	CCCWGGG	1 cut(s)	728
PceI	AGGCCT	2 cut(s)	661, 667
PctI	GAATGC	2 cut(s)	1237, 1436
PfeI	GAWTC	5 cut(s)	187, 543, 674, 967, 1991
PflMI	CCANNNNNTGG	2 cut(s)	707, 789
PleI	GAGTC	1 cut(s)	537
PpsI	GAGTC	1 cut(s)	537
PpuMI	RGGWCCY	3 cut(s)	356, 683, 884
PshAI	GACNNNNGTC	1 cut(s)	1201
PsiI	TTATAA	1 cut(s)	1710
Psp5II	RGGWCCY	3 cut(s)	356, 683, 884
Psp6I	CCWGG	6 cut(s)	343, 667, 700, 727, 832, 1944
PspGI	CCWGG	6 cut(s)	343, 667, 700, 727, 832, 1944
PspOMI	GGGCCC	1 cut(s)	852
PspPPI	RGGWCCY	3 cut(s)	356, 683, 884
PstI	CTGCAG	2 cut(s)	261, 1594
PstNI	CAGNNNCTG	3 cut(s)	176, 1384, 1489
PvuII	CAGCTG	3 cut(s)	1201, 1447, 1589
RsaI	GTAC	5 cut(s)	413, 744, 1551, 1703, 1943
RsaNI	GTAC	5 cut(s)	412, 743, 1550, 1702, 1942
SaqAI	TTAA	6 cut(s)	279, 549, 891, 972, 1155, 1277
Sau3AI	GATC	6 cut(s)	115, 155, 234, 649, 757, 769
ScaI	AGTACT	1 cut(s)	1703
SchI	GAGTC	1 cut(s)	538
ScrFI	CCNGG	7 cut(s)	345, 669, 702, 729, 834, 1688, 1946
SduI	GDGCHC	3 cut(s)	431, 856, 1680
SfaNI	GCATC	7 cut(s)	802, 972, 1244, 1371, 1507, 1857, 1879
SfcI	CTRYAG	3 cut(s)	257, 915, 1590
SinI	GGWCC	8 cut(s)	11, 356, 683, 698, 710, 884, 923, 1222
Sse9I	AATT	9 cut(s)	468, 518, 774, 798, 892, 1002, 1956, 1984, 2003
SseBI	AGGCCT	2 cut(s)	661, 667
SsiI	CCGC	7 cut(s)	6, 15, 59, 62, 900, 1194, 1296
SspI	AATATT	1 cut(s)	2022
SspMI	CTAG	3 cut(s)	488, 663, 867
StuI	AGGCCT	2 cut(s)	661, 667
StyD4I	CCNGG	7 cut(s)	343, 667, 700, 727, 832, 1686, 1944
StyI	CCWWGG	4 cut(s)	397, 662, 866, 904
TaaI	ACNGT	3 cut(s)	420, 637, 1561
TaiI	ACGT	2 cut(s)	1318, 1943
TaqI	TCGA	2 cut(s)	980, 1289
TasI	AATT	9 cut(s)	468, 518, 774, 798, 892, 1002, 1956, 1984, 2003
TatI	WGTACW	2 cut(s)	411, 1701
TauI	GCSGC	2 cut(s)	64, 903
TfiI	GAWTC	5 cut(s)	187, 543, 674, 967, 1991
Tru1I	TTAA	6 cut(s)	279, 549, 891, 972, 1155, 1277
Tru9I	TTAA	6 cut(s)	279, 549, 891, 972, 1155, 1277
TscAI	CASTG	5 cut(s)	181, 237, 438, 1541, 2001
TseFI	GTSAC	1 cut(s)	1029
Tsp45I	GTSAC	1 cut(s)	1029
TspDTI	ATGAA	5 cut(s)	531, 936, 1046, 1877, 1997
TspGWI	ACGGA	1 cut(s)	464
TspRI	CASTG	5 cut(s)	181, 237, 438, 1541, 2001
Van91I	CCANNNNNTGG	2 cut(s)	707, 789
VpaK11BI	GGWCC	8 cut(s)	11, 356, 683, 698, 710, 884, 923, 1222
XapI	RAATTY	5 cut(s)	468, 774, 1002, 1984, 2003
XcmI	CCANNNNNNNNNTGG	1 cut(s)	786
XmaJI	CCTAGG	2 cut(s)	662, 866
XspI	CTAG	3 cut(s)	488, 663, 867
ZrmI	AGTACT	1 cut(s)	1703
Zsp2I	ATGCAT	2 cut(s)	1237, 1872

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.