Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0007063.1

Orthogroup ID

OG0008816

Physical Location & Seq

Genomic Coordinates Reverse (-)

9259 .. 18614

Gene Structure 9356 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0007063.1_g000004.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2304 bp

ctggataggtacagagtagaccgctatggccacaacaacgacgacgacgcccctgactaccgtcgtccctctctcttctccgacgcccccgtcaaccctcagccccacctccctcgccgcagcccccctaactaccgcggcgccggcgccgcccgtggcttcgacagtccgcctcttcactctcccgcaggaggattccagccattgatgcccgccggacccgctgccggtgccggagggtttcgcccttcccaccccgaccctccgccgctctccggtcagaaacgaggccatcctttctctgcccgtggtggctctccagatcgttttgatagaggagggtttgccaagctttttgttggatcagttccgaggacagccactgagggagagattcgccctttgtttgaagagcatggagaagtggtagaggttgcgctgatcaaagacaagaaaaccggactgcagcaaggttgttgttttattaaatatgcaacctcagaagaagctgatagggccattagagctttgcataatcaacatactcttcctgggggagtaggtcctatccaagtcagatatgctgatggggaacgagaacgccttggtgcagttgagtacaaactgtttgtgggctcactgaacaaacaagctacggaaaaggaagttgaggaaattttttcaccatatggtctagttgaagatgtttacctcatgcgtgatgaattgaagcagagtcgtggatgtggattcgttaagtattcccaccgagatatggcgttgtcagcaataaatggtctaaacgggcgctacactatgagaggttgtgagcaaccactaactgtccggtttgctgatcctaaaaggcctaggcctggagaatcaaggggtccttcttttggaggtccaggttttggtcctcggtttcaaagcccaggggtcagaccagtacctaactttggtgatcctacgagtgatcaaattccaactaatgcttggcatccaattagtccaccaaacttggtgccatcccccaatcctggtattcgtggcttcggggcccatttgcttcctaggtctggagacatgggaccctttaattcgggcggccatggcagctctgtagagggtccacatcctgtgatggcagtttcatctcaaacaacacagcagaatcttaaccagtcgatgccacatatgggccagcaaatttccccattacagaagcataatcagtcacctcagcatttgccaccttcccttcatcagcaccctcaaactccagcaccctacgcgctcacacaaacagcacggcaggttggtcaaccacagcttcctcctcctgctggccaaacaccatttaatcaagctttaccatcacaaaggttacatgggttgggcggacagctgtcggcctctcagcctgaggtccagcagaatgcatcatctgctcctgcattaccaacccttttgaatatcaacttaaaatctcattcgatgtccgcaacaaatcaacagcaacgtccttctgctcctgttcaacaacaacttcaaacgcttcagcagtctccttctcagttagctcagatgctgtcgcaacagacacaaactttgcaggcaagctttcaatcgtctcagcaggcgttctcgcagctgcaacaacaggtgcagcaaatgcaaccatcaaatcagggtctgtcgctgcatcagacttcccagtccaacaaacagcagcagtctcagtggaatggaatggtaccacagacagttgcaaatacccctgctacaacaccagctgcagatgtgccttcagccacatctgttgctcctgctatacctgtaacaaaccagactgtaactcctgcaaaatgtatttggacagagcacacctccccggatggatacaagtactattataatagtgcaactggtgaaagcaggtgggaaaaacctgccgaacttgcattgtttgagcaacagcagcaccaccaaaagacatcagttcagcagcctcagaccccttcactacctcaaaatctatctgcgcagcagcaagcatctcaaacacaacaaatgcatcttcaatctcatcttcatccacagcctcggcccaatcttcagtcgcaacagccatctttgtcttcaacgtaccaggcttctggaattgtaggccaacaaaatgctcaggacttcggattttcaaagttacccccgacaaccagctcagttagtgatcctcgcttccaacaggggcttcaggctgctcaggaatggatgtggaagaacaagccaacaggtgcttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RRM_1 WW

Protein Analysis

767

Amino Acids

83.44

Weight (kDa)

9.24

Isoelectric Point (pI)

64.89

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008816)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G16280 AT4G16280 AT4G16280 AT4G16280
fragaria_vesca	FvH4_4g20210
malus_domestica	MD13G1150500.v1.1 MD16G1150700.v1.1
prunus_persica	Prupe.1G114600_v2.0.a1 Prupe.1G114600_v2.0.a1 Prupe.1G114600_v2.0.a1 Prupe.1G114600_v2.0.a1
pyrus_communis	pycom13g12930 pycom16g12910
rosa_chinensis	RchiOBHm_Chr4g0425821
rosa_laevigata	RLG00000007337
rosa_multiflora	Rmu_sc0007063.1_g000004
rosa_roxburghii	Rroxscaffold_5G00367810
rosa_rugosa	Rorug04G0206600
rosa_samantha	Rh4AG263700 Rh4BG269600 Rh4CG282000 Rh4DG266000
rosa_wichuraiana	Rw4G022760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1917
AarI	CACCTGC	1 cut(s)	1929
AasI	GACNNNNNNGTC	2 cut(s)	89, 1717
Acc16I	TGCGCA	1 cut(s)	2046
Acc36I	ACCTGC	3 cut(s)	1306, 1929, 1960
Acc65I	GGTACC	1 cut(s)	1756
AccB1I	GGYRCC	5 cut(s)	140, 146, 230, 1024, 1756
AccB7I	CCANNNNNTGG	1 cut(s)	914
AccBSI	CCGCTC	1 cut(s)	271
AccI	GTMKAC	1 cut(s)	18
AccII	CGCG	2 cut(s)	138, 1295
AclWI	GGATC	4 cut(s)	370, 851, 959, 2228
AcoI	YGGCCR	3 cut(s)	28, 1108, 1348
AcsI	RAATTY	3 cut(s)	675, 981, 1209
AcuI	CTGAAG	4 cut(s)	1544, 1794, 2102, 2240
AcyI	GRCGYC	4 cut(s)	48, 84, 141, 147
AfaI	GTAC	6 cut(s)	11, 620, 951, 1758, 1910, 2150
AjnI	CCWGG	6 cut(s)	550, 874, 907, 934, 1039, 2151
AjuI	GAANNNNNNNTTGG	2 cut(s)	2238, 2270
Alw21I	GWGCWC	1 cut(s)	1887
Alw26I	GTCTC	4 cut(s)	1077, 1572, 1638, 1743
AlwI	GGATC	4 cut(s)	370, 851, 959, 2228
AlwNI	CAGNNNCTG	3 cut(s)	383, 1591, 1696
ApaI	GGGCCC	1 cut(s)	1063
ApoI	RAATTY	3 cut(s)	675, 981, 1209
ArsI	GACNNNNNNTTYG	2 cut(s)	1594, 1626
Asp718I	GGTACC	1 cut(s)	1756
AspA2I	CCTAGG	2 cut(s)	869, 1073
AspLEI	GCGC	6 cut(s)	143, 149, 439, 810, 1297, 2047
AsuC2I	CCSGG	1 cut(s)	1895
AsuHPI	GGTGA	4 cut(s)	675, 974, 1230, 1943
AvaII	GGWCC	8 cut(s)	218, 563, 890, 905, 917, 1091, 1130, 1429
AvrII	CCTAGG	2 cut(s)	869, 1073
AxyI	CCTNAGG	1 cut(s)	1425
BaeGI	GKGCMC	1 cut(s)	1063
BalI	TGGCCA	2 cut(s)	30, 1350
BanI	GGYRCC	5 cut(s)	140, 146, 230, 1024, 1756
BanII	GRGCYC	2 cut(s)	638, 1063
BbsI	GAAGAC	1 cut(s)	2133
Bbv12I	GWGCWC	1 cut(s)	1887
BbvCI	CCTCAGC	2 cut(s)	99, 1242
BccI	CCATC	8 cut(s)	300, 581, 1036, 1138, 1384, 1690, 1892, 2140
BceAI	ACGGC	1 cut(s)	1328
BciT130I	CCWGG	6 cut(s)	552, 876, 909, 936, 1041, 2153
BciVI	GTATCC	1 cut(s)	1895
BclI	TGATCA	2 cut(s)	441, 976
BcnI	CCSGG	1 cut(s)	1895
BcoDI	GTCTC	4 cut(s)	1077, 1572, 1638, 1743
BfaI	CTAG	3 cut(s)	695, 870, 1074
BfmI	CTRYAG	3 cut(s)	464, 1122, 1797
BfoI	RGCGCY	3 cut(s)	144, 150, 811
BfuAI	ACCTGC	3 cut(s)	1306, 1929, 1960
BfuI	GTATCC	1 cut(s)	1895
BlnI	CCTAGG	2 cut(s)	869, 1073
BmcAI	AGTACT	1 cut(s)	1910
Bme1390I	CCNGG	7 cut(s)	552, 876, 909, 936, 1041, 1895, 2153
Bme18I	GGWCC	8 cut(s)	218, 563, 890, 905, 917, 1091, 1130, 1429
BmrFI	CCNGG	7 cut(s)	552, 876, 909, 936, 1041, 1895, 2153
BmrI	ACTGGG	1 cut(s)	1711
BmsI	GCATC	8 cut(s)	198, 1009, 1179, 1451, 1578, 1714, 2066, 2086
BmuI	ACTGGG	1 cut(s)	1711
BoxI	GACNNNNGTC	2 cut(s)	60, 1408
BpiI	GAAGAC	1 cut(s)	2133
BplI	GAGNNNNNCTC	2 cut(s)	1874, 1906
BpmI	CTGGAG	4 cut(s)	303, 897, 1101, 1266
Bpu10I	CCTNAGC	4 cut(s)	99, 1242, 2184, 2265
BpuMI	CCSGG	1 cut(s)	1895
BsaHI	GRCGYC	4 cut(s)	48, 84, 141, 147
BsaWI	WCCGGW	3 cut(s)	275, 458, 846
BsaXI	ACNNNNNCTCC	4 cut(s)	411, 441, 1843, 1873
Bse118I	RCCGGY	2 cut(s)	143, 227
Bse1I	ACTGG	4 cut(s)	947, 1183, 1717, 1933
Bse21I	CCTNAGG	1 cut(s)	1425
BseBI	CCWGG	6 cut(s)	552, 876, 909, 936, 1041, 2153
BseGI	GGATG	8 cut(s)	292, 749, 1000, 1028, 1135, 1903, 2095, 2280
BseNI	ACTGG	4 cut(s)	947, 1183, 1717, 1933
BseRI	GAGGAG	2 cut(s)	351, 1329
BseSI	GKGCMC	1 cut(s)	1063
BsgI	GTGCAG	2 cut(s)	630, 1688
Bsh1236I	CGCG	2 cut(s)	138, 1295
BshNI	GGYRCC	5 cut(s)	140, 146, 230, 1024, 1756
BsiHKAI	GWGCWC	1 cut(s)	1887
BsiSI	CCGG	8 cut(s)	144, 216, 228, 234, 276, 459, 847, 1895
BslFI	GGGAC	2 cut(s)	51, 1104
BsmAI	GTCTC	4 cut(s)	1077, 1572, 1638, 1743
BsmBI	CGTCTC	1 cut(s)	1638
BsmFI	GGGAC	2 cut(s)	51, 1104
BsmI	GAATGC	1 cut(s)	1444
Bsp120I	GGGCCC	1 cut(s)	1059
Bsp1286I	GDGCHC	3 cut(s)	638, 1063, 1887
Bsp143I	GATC	7 cut(s)	322, 362, 441, 856, 964, 976, 2233
Bsp19I	CCATGG	1 cut(s)	1111
BspFNI	CGCG	2 cut(s)	138, 1295
BspMAI	CTGCAG	2 cut(s)	468, 1801
BspMI	ACCTGC	3 cut(s)	1306, 1929, 1960
BspPI	GGATC	4 cut(s)	370, 851, 959, 2228
BspQI	GCTCTTC	1 cut(s)	405
BspT107I	GGYRCC	5 cut(s)	140, 146, 230, 1024, 1756
BsrBI	CCGCTC	1 cut(s)	271
BsrFI	RCCGGY	2 cut(s)	143, 227
BsrI	ACTGG	4 cut(s)	947, 1183, 1717, 1933
BssAI	RCCGGY	2 cut(s)	143, 227
BssMI	GATC	7 cut(s)	322, 362, 441, 856, 964, 976, 2233
BssNI	GRCGYC	4 cut(s)	48, 84, 141, 147
BssT1I	CCWWGG	4 cut(s)	604, 869, 1073, 1111
Bst2UI	CCWGG	6 cut(s)	552, 876, 909, 936, 1041, 2153
Bst4CI	ACNGT	6 cut(s)	62, 167, 627, 844, 1768, 1855
Bst6I	CTCTTC	4 cut(s)	80, 180, 405, 552
BstACI	GRCGYC	4 cut(s)	48, 84, 141, 147
BstAPI	GCANNNNNTGC	2 cut(s)	1448, 1675
BstC8I	GCNNGC	8 cut(s)	145, 213, 1205, 1348, 1617, 1621, 1641, 2055
BstDSI	CCRYGG	4 cut(s)	136, 154, 307, 1111
BstF5I	GGATG	8 cut(s)	292, 749, 1000, 1028, 1135, 1903, 2095, 2280
BstFNI	CGCG	2 cut(s)	138, 1295
BstH2I	RGCGCY	3 cut(s)	144, 150, 811
BstHHI	GCGC	6 cut(s)	143, 149, 439, 810, 1297, 2047
BstKTI	GATC	7 cut(s)	325, 365, 444, 859, 967, 979, 2236
BstMAI	GTCTC	4 cut(s)	1077, 1572, 1638, 1743
BstMBI	GATC	7 cut(s)	322, 362, 441, 856, 964, 976, 2233
BstNI	CCWGG	6 cut(s)	552, 876, 909, 936, 1041, 2153
BstPAI	GACNNNNGTC	2 cut(s)	60, 1408
BstSCI	CCNGG	7 cut(s)	550, 874, 907, 934, 1039, 1893, 2151
BstSFI	CTRYAG	3 cut(s)	464, 1122, 1797
BstSLI	GKGCMC	1 cut(s)	1063
BstUI	CGCG	2 cut(s)	138, 1295
BstV2I	GAAGAC	1 cut(s)	2133
BstXI	CCANNNNNNTGG	1 cut(s)	2159
Bsu36I	CCTNAGG	1 cut(s)	1425
BsuI	GTATCC	1 cut(s)	1895
BtgI	CCRYGG	4 cut(s)	136, 154, 307, 1111
BtsCI	GGATG	8 cut(s)	292, 749, 1000, 1028, 1135, 1903, 2095, 2280
BtsIMutI	CAGTG	3 cut(s)	381, 638, 1748
BveI	ACCTGC	3 cut(s)	1306, 1929, 1960
Cac8I	GCNNGC	8 cut(s)	145, 213, 1205, 1348, 1617, 1621, 1641, 2055
CaiI	CAGNNNCTG	3 cut(s)	383, 1591, 1696
CfoI	GCGC	6 cut(s)	143, 149, 439, 810, 1297, 2047
Cfr10I	RCCGGY	2 cut(s)	143, 227
Cfr42I	CCGCGG	1 cut(s)	139
CseI	GACGC	2 cut(s)	56, 92
Csp6I	GTAC	6 cut(s)	10, 619, 950, 1757, 1909, 2149
CspCI	CAANNNNNGTGG	4 cut(s)	1002, 1037, 1804, 1839
CviAII	CATG	5 cut(s)	416, 715, 1087, 1112, 1391
CviQI	GTAC	6 cut(s)	10, 619, 950, 1757, 1909, 2149
DinI	GGCGCC	2 cut(s)	142, 148
DpnI	GATC	7 cut(s)	324, 364, 443, 858, 966, 978, 2235
DpnII	GATC	7 cut(s)	322, 362, 441, 856, 964, 976, 2233
DrdI	GACNNNNNNGTC	2 cut(s)	89, 1717
DseDI	GACNNNNNNGTC	2 cut(s)	89, 1717
EaeI	YGGCCR	3 cut(s)	28, 1108, 1348
Eam1104I	CTCTTC	4 cut(s)	80, 180, 405, 552
EarI	CTCTTC	4 cut(s)	80, 180, 405, 552
EciI	GGCGGA	3 cut(s)	159, 255, 1416
Eco130I	CCWWGG	4 cut(s)	604, 869, 1073, 1111
Eco147I	AGGCCT	2 cut(s)	868, 874
Eco24I	GRGCYC	2 cut(s)	638, 1063
Eco47I	GGWCC	8 cut(s)	218, 563, 890, 905, 917, 1091, 1130, 1429
Eco57I	CTGAAG	4 cut(s)	1544, 1794, 2102, 2240
Eco81I	CCTNAGG	1 cut(s)	1425
EcoO109I	RGGNCCY	4 cut(s)	563, 890, 1059, 1091
EcoRII	CCWGG	6 cut(s)	550, 874, 907, 934, 1039, 2151
EcoT14I	CCWWGG	4 cut(s)	604, 869, 1073, 1111
EcoT22I	ATGCAT	2 cut(s)	1444, 2079
EcoT38I	GRGCYC	2 cut(s)	638, 1063
EgeI	GGCGCC	2 cut(s)	142, 148
EheI	GGCGCC	2 cut(s)	142, 148
ErhI	CCWWGG	4 cut(s)	604, 869, 1073, 1111
Esp3I	CGTCTC	1 cut(s)	1638
FaeI	CATG	5 cut(s)	419, 718, 1090, 1115, 1394
FalI	AAGNNNNNCTT	2 cut(s)	877, 909
FaqI	GGGAC	2 cut(s)	51, 1104
FatI	CATG	5 cut(s)	415, 714, 1086, 1111, 1390
FauI	CCCGC	3 cut(s)	193, 220, 229
FauNDI	CATATG	2 cut(s)	688, 1197
FbaI	TGATCA	2 cut(s)	441, 976
FblI	GTMKAC	1 cut(s)	18
FokI	GGATG	8 cut(s)	279, 756, 987, 1015, 1122, 1910, 2082, 2287
FriOI	GRGCYC	2 cut(s)	638, 1063
FspBI	CTAG	3 cut(s)	695, 870, 1074
FspI	TGCGCA	1 cut(s)	2046
GlaI	GCGC	6 cut(s)	142, 148, 438, 809, 1296, 2046
GsuI	CTGGAG	4 cut(s)	303, 897, 1101, 1266
HaeII	RGCGCY	3 cut(s)	144, 150, 811
HapII	CCGG	8 cut(s)	144, 216, 228, 234, 276, 459, 847, 1895
HgaI	GACGC	2 cut(s)	56, 92
HhaI	GCGC	6 cut(s)	143, 149, 439, 810, 1297, 2047
Hin1I	GRCGYC	4 cut(s)	48, 84, 141, 147
Hin1II	CATG	5 cut(s)	419, 718, 1090, 1115, 1394
Hin6I	GCGC	6 cut(s)	141, 147, 437, 808, 1295, 2045
HinP1I	GCGC	6 cut(s)	141, 147, 437, 808, 1295, 2045
HincII	GTYRAC	2 cut(s)	94, 1325
HindII	GTYRAC	2 cut(s)	94, 1325
HindIII	AAGCTT	3 cut(s)	350, 1368, 1621
HinfI	GANTC	6 cut(s)	195, 394, 736, 750, 881, 1174
HpaII	CCGG	8 cut(s)	144, 216, 228, 234, 276, 459, 847, 1895
HphI	GGTGA	4 cut(s)	675, 974, 1230, 1943
Hpy166II	GTNNAC	6 cut(s)	19, 94, 709, 1013, 1133, 1325
Hpy188III	TCNNGA	5 cut(s)	320, 1080, 2160, 2186, 2267
Hpy8I	GTNNAC	6 cut(s)	19, 94, 709, 1013, 1133, 1325
Hpy99I	CGWCG	5 cut(s)	44, 47, 50, 66, 86
HpyAV	CCTTC	8 cut(s)	258, 903, 1266, 1271, 1536, 1581, 1818, 2031
HpyCH4III	ACNGT	6 cut(s)	62, 167, 627, 844, 1768, 1855
HpyCH4IV	ACGT	2 cut(s)	1522, 2147
HpySE526I	ACGT	2 cut(s)	1522, 2147
Hsp92I	GRCGYC	4 cut(s)	48, 84, 141, 147
Hsp92II	CATG	5 cut(s)	419, 718, 1090, 1115, 1394
HspAI	GCGC	6 cut(s)	141, 147, 437, 808, 1295, 2045
KasI	GGCGCC	2 cut(s)	140, 146
KflI	GGGWCCC	1 cut(s)	1091
KpnI	GGTACC	1 cut(s)	1760
KroI	GCCGGC	1 cut(s)	143
KroNI	GCCGGC	1 cut(s)	145
Ksp22I	TGATCA	2 cut(s)	441, 976
KspI	CCGCGG	1 cut(s)	139
Kzo9I	GATC	7 cut(s)	322, 362, 441, 856, 964, 976, 2233
LguI	GCTCTTC	1 cut(s)	405
LmnI	GCTCC	3 cut(s)	1456, 1537, 1831
LweI	GCATC	8 cut(s)	198, 1009, 1179, 1451, 1578, 1714, 2066, 2086
MaeI	CTAG	3 cut(s)	695, 870, 1074
MaeII	ACGT	2 cut(s)	1522, 2147
MaeIII	GTNAC	5 cut(s)	1236, 1386, 1840, 1855, 2205
MalI	GATC	7 cut(s)	324, 364, 443, 858, 966, 978, 2235
MbiI	CCGCTC	1 cut(s)	271
MboI	GATC	7 cut(s)	322, 362, 441, 856, 964, 976, 2233
MhlI	GDGCHC	3 cut(s)	638, 1063, 1887
MlsI	TGGCCA	2 cut(s)	30, 1350
MluCI	AATT	7 cut(s)	675, 725, 981, 1005, 1099, 1209, 2163
MluNI	TGGCCA	2 cut(s)	30, 1350
Mly113I	GGCGCC	2 cut(s)	141, 147
MlyI	GAGTC	1 cut(s)	745
MmeI	TCCRAC	5 cut(s)	105, 340, 1010, 1746, 2269
Mox20I	TGGCCA	2 cut(s)	30, 1350
Mph1103I	ATGCAT	2 cut(s)	1444, 2079
MreI	CGCCGGCG	1 cut(s)	143
MroNI	GCCGGC	1 cut(s)	143
MscI	TGGCCA	2 cut(s)	30, 1350
MseI	TTAA	6 cut(s)	486, 756, 1098, 1179, 1362, 1484
Msp20I	TGGCCA	2 cut(s)	30, 1350
MspA1I	CMGCKG	5 cut(s)	138, 224, 1408, 1654, 1796
MspI	CCGG	8 cut(s)	144, 216, 228, 234, 276, 459, 847, 1895
MspR9I	CCNGG	7 cut(s)	552, 876, 909, 936, 1041, 1895, 2153
Mva1269I	GAATGC	1 cut(s)	1444
MvaI	CCWGG	6 cut(s)	552, 876, 909, 936, 1041, 2153
MvnI	CGCG	2 cut(s)	138, 1295
NaeI	GCCGGC	1 cut(s)	145
NarI	GGCGCC	2 cut(s)	141, 147
NciI	CCSGG	1 cut(s)	1895
NcoI	CCATGG	1 cut(s)	1111
NdeI	CATATG	2 cut(s)	688, 1197
NdeII	GATC	7 cut(s)	322, 362, 441, 856, 964, 976, 2233
NgoMIV	GCCGGC	1 cut(s)	143
NlaIII	CATG	5 cut(s)	419, 718, 1090, 1115, 1394
NmeAIII	GCCGAG	1 cut(s)	2086
NmuCI	GTSAC	1 cut(s)	1236
NsbI	TGCGCA	1 cut(s)	2046
NsiI	ATGCAT	2 cut(s)	1444, 2079
PaqCI	CACCTGC	1 cut(s)	1929
PasI	CCCWGGG	1 cut(s)	935
PceI	AGGCCT	2 cut(s)	868, 874
PciSI	GCTCTTC	1 cut(s)	405
PctI	GAATGC	1 cut(s)	1444
PdiI	GCCGGC	1 cut(s)	145
PfeI	GAWTC	5 cut(s)	195, 394, 750, 881, 1174
PflMI	CCANNNNNTGG	1 cut(s)	914
PleI	GAGTC	1 cut(s)	744
PluTI	GGCGCC	2 cut(s)	144, 150
PpsI	GAGTC	1 cut(s)	744
PpuMI	RGGWCCY	3 cut(s)	563, 890, 1091
PshAI	GACNNNNGTC	2 cut(s)	60, 1408
PsiI	TTATAA	1 cut(s)	1917
Psp5II	RGGWCCY	3 cut(s)	563, 890, 1091
Psp6I	CCWGG	6 cut(s)	550, 874, 907, 934, 1039, 2151
PspGI	CCWGG	6 cut(s)	550, 874, 907, 934, 1039, 2151
PspOMI	GGGCCC	1 cut(s)	1059
PspPPI	RGGWCCY	3 cut(s)	563, 890, 1091
PstI	CTGCAG	2 cut(s)	468, 1801
PstNI	CAGNNNCTG	3 cut(s)	383, 1591, 1696
PvuII	CAGCTG	3 cut(s)	1408, 1654, 1796
RsaI	GTAC	6 cut(s)	11, 620, 951, 1758, 1910, 2150
RsaNI	GTAC	6 cut(s)	10, 619, 950, 1757, 1909, 2149
SacII	CCGCGG	1 cut(s)	139
SapI	GCTCTTC	1 cut(s)	405
SaqAI	TTAA	6 cut(s)	486, 756, 1098, 1179, 1362, 1484
Sau3AI	GATC	7 cut(s)	322, 362, 441, 856, 964, 976, 2233
ScaI	AGTACT	1 cut(s)	1910
SchI	GAGTC	1 cut(s)	745
ScrFI	CCNGG	7 cut(s)	552, 876, 909, 936, 1041, 1895, 2153
SduI	GDGCHC	3 cut(s)	638, 1063, 1887
SfaNI	GCATC	8 cut(s)	198, 1009, 1179, 1451, 1578, 1714, 2066, 2086
SfcI	CTRYAG	3 cut(s)	464, 1122, 1797
SfoI	GGCGCC	2 cut(s)	142, 148
Sfr303I	CCGCGG	1 cut(s)	139
SgrAI	CRCCGGYG	1 cut(s)	143
SgrBI	CCGCGG	1 cut(s)	139
SinI	GGWCC	8 cut(s)	218, 563, 890, 905, 917, 1091, 1130, 1429
Sse9I	AATT	7 cut(s)	675, 725, 981, 1005, 1099, 1209, 2163
SseBI	AGGCCT	2 cut(s)	868, 874
SspDI	GGCGCC	2 cut(s)	140, 146
SspMI	CTAG	3 cut(s)	695, 870, 1074
StuI	AGGCCT	2 cut(s)	868, 874
StyD4I	CCNGG	7 cut(s)	550, 874, 907, 934, 1039, 1893, 2151
StyI	CCWWGG	4 cut(s)	604, 869, 1073, 1111
TaaI	ACNGT	6 cut(s)	62, 167, 627, 844, 1768, 1855
TaiI	ACGT	2 cut(s)	1525, 2150
TaqI	TCGA	3 cut(s)	162, 1187, 1496
TasI	AATT	7 cut(s)	675, 725, 981, 1005, 1099, 1209, 2163
TatI	WGTACW	2 cut(s)	618, 1908
TauI	GCSGC	5 cut(s)	120, 141, 152, 271, 1110
TfiI	GAWTC	5 cut(s)	195, 394, 750, 881, 1174
Tru1I	TTAA	6 cut(s)	486, 756, 1098, 1179, 1362, 1484
Tru9I	TTAA	6 cut(s)	486, 756, 1098, 1179, 1362, 1484
TscAI	CASTG	3 cut(s)	388, 645, 1748
TseFI	GTSAC	1 cut(s)	1236
Tsp45I	GTSAC	1 cut(s)	1236
TspDTI	ATGAA	4 cut(s)	738, 1143, 1253, 2084
TspGWI	ACGGA	1 cut(s)	671
TspRI	CASTG	3 cut(s)	388, 645, 1748
Van91I	CCANNNNNTGG	1 cut(s)	914
VpaK11BI	GGWCC	8 cut(s)	218, 563, 890, 905, 917, 1091, 1130, 1429
XapI	RAATTY	3 cut(s)	675, 981, 1209
XcmI	CCANNNNNNNNNTGG	1 cut(s)	993
XmaJI	CCTAGG	2 cut(s)	869, 1073
XmiI	GTMKAC	1 cut(s)	18
XspI	CTAG	3 cut(s)	695, 870, 1074
ZrmI	AGTACT	1 cut(s)	1910
Zsp2I	ATGCAT	2 cut(s)	1444, 2079

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.