FvH4_4g22690

Protein MEI2-like 4 isoform X1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0001846
Physical Location & Seq
Reverse (-)
25417713 .. 25425228
7516 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g22690.t6

Sequence Viewer

Length: 2874 bp
ATGCCATCTGAAGTAATGGACGTAAAGGGCTTGCCATCTTCTTCATTCTTCTCTGAGGATGCATTTTTCCCCAACGAGAGACAGGTTGGGTTTTGGAAGTCAGATAACATGCCAGATGAACATGCTGGTAAGAAGTCACTTGCATCATCATCCTTGGAGAAGTGTCAGACGGTGAAATCCCTAGACCACCCTGATTTTTTCTCAATGCGAGAAAAAAAGGTGCACCCCGGTTTCAATAGACAAGCAGTTGGGGCAGAGAGAGCCTTAAGTCATTCCTTGAATTTATCGAGAACTGTGAGCCTTGACTCAGTAACAAAATCTAATGTAAATGTTGAGACAGCATCTTACTATGCAGAAGGTGGCAGAGTCAATTTGATGGGAACACAGTATGAGAGTAGCCTTTTCTCGAGTTCATTATCTGAATTGTTTAGTATGAAGTTGAGACTATCGTCAAACAATGCACAATATGGGCAGTCAGTTGATAGTGTTGCCTCAAACTATGAGGAAGAGGATGTTTTTGAATCCCTTGAAGAAATGGAGGCCCAAACCATTGGAAACCTTCTCCCCAATGACGATGAGTTGCTTTCTGGAGTTACCGATGGGCTTGAATATAATGTTCCACTCACTGCAGGTGATGATACTGAGGAGTTAGATATTTTTAGCAGCAGTGGAGGGATGGATTTGGGAGACGATGGTTTGTCAGCTGGACTGAACAATGTTGATCGCCCTGGAGGAGTTTCTAATGGCCTGCAATGCAATGGTTCATTACTGGGAGAACACCCTCATGGTGAACACCCTTCGAGGACATTGTTTGTGAGAAATATAAATAGTAACATTGAAGACTCGGAGTTGAGAACCCTGTTTGAGCAATATGGAGACATTCGGACTCTTTATACAGCCTGCAAACATCGTGGGTTTGTCATGATATCATATTATGATATCAGAGCAGCCCGGAATGCGATGAAAGCACTCCAGAACAAACCCTTGAGGCGCCGGAAGCTTGATATTCACTACTCAATTCCAAAGGACAATCCTTCTGAGAAAGATGTTAATCAGGGCATTCTTGTGGTATTCAACCTTGATTCTTCTGTTTCTAATGACGAACTTCGTGAGCTTTTTGGTGTCTACGGTGAAATCAAAGAGATCCGTGAAACACCAAATAGAATTCATCACAAGTTTATCGAATTTTATGATGTTAGAGCTGCAGAATCTGCTCTTAATGCCCTGAACATGAGTGATATAGCCGGGAAGAGAATAAAGCTTGAGCCAAGTCGTCCTGGAGGTGCAAAAAGGAGCTCGGGGTTAGAGCAGGATGATTGTGGCCTTTATTTGCAGCAGAGTAGCCCTCCTAGTAATTCTGTTACTGGTTTCTCTGATAATGGATCTGTTATGGCTGTACACTCTGCAGCTCCGTCTTTTGAGAACATGTTCCATCATGGGATCTCATCTAGTGTACCCAACAGCCTATCATCTGTAATGAGAGTTGAGTCAGCAGTCAGTCAGTCTGGCTTTAATGAGTCCATTCATTCAGCAAGCCCGCTGAAATTTGACATCCACGGCTCACCAGCTTTTCATCCTCATTCACTTCCAGAGTATCACAATGGTTCCCCTAATTGTGCCAACTGCGGTTCAACAGGCAGTGTATCTGCAAGTATCAATGTCAGACAACCAGAAAGAATTGATAACAGGCACTTCCCCAGAGTCTCTAGTGGGCACTCACTTGAACTTAATGATAGTGTTTTTGGATCGTCGGGTAATGTGAACGGCCCTAATCCTGGACATCATTATGCATGGAACAATTCCTTTCAGCCTCAGGGTCCAGGTATGATGTGGTCAAATTCACCATCATATGCTAATGGAATCTCGGCAGCTCATTCCCCACAGCGGATGCATGGACTTCCTAGAGCACCATCTCATATGTTAAACCCAGCAATGCCCATAAATAACCATCATGTGGGTTCAGCCCTAGGGCCTAACTCAATCTGGGACCAGAGACAAGCATATGCAGGGGAATCCCCCGATGCATCTGGATTTCATCCAGGCTCTCTTGGGAATATGAGAATGCCAAATAAATCACCGCATTCGTTGGACTATGTTTCTCATAACATGTTTCCTCATGTTAATGGAAACGGCATGGACCTATCAGTTCCCCACAAAAATGTAGGACTCCAGGCTCATCATCAAAGGTGCATGATGTATCCTGGAAGAAGCCAGATGGGTCCTGTTATGAATTCATTTGATCAACCTACTGAACGTCCAAGAAATCGTAGAAATGAAGGCAGCTCAAATCAGGATAACAAGAAACAGTTCGAACTTGATATTGACCGCATCATGCGAGGGGATGACACCAGAACAACGCTTATGATAAAGAATATTCCCAACAAGTATACCTCAAAGATGCTATTGGCTGCAATTGATGAGCGCCATCGTGGAACATATGATTTCATCTATCTGCCAATTGATTTTAAGAACAAATGCAATGTGGGGTATGCATTCATCAATATGACTGATCCCAGACAGATTGTTCCATTTTATCAGTCATTCAATGGGAAGAAATGGGAGAAGTTTAATAGTGAGAAGGTGGCATCACTTGCGTATGCTCGAATTCAAGGCAAATCTGCTCTGATTGCACATTTTCAGAACTCAAGCCTGATGAATGAGGACAAGCGATGCCGTCCAATTCTCTTCAACACTGATGGCCCCAATGCAGGTGATCAGGTGCCCTTCCCGATGGGTGTTAATGTTCGTACGAGACCTGGAAAGTCTCGAACAACCACCAATGAGGAGAACAATGGAGGGAGTCCACCAAACTCAGGAGATGGGGAACATTCTTGGAATGGAGGTTCATCTGCAGGTTCTAAGGACGCGGACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RRM_1 RRM_2

Protein Analysis

958

Amino Acids

105.37

Weight (kDa)

6.1

Isoelectric Point (pI)

50.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RRM_1 PF00076 202 - 266 1.6e-10 RNA recognition motif
RRM_5 PF13893 283 - 359 3.5e-06 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
RRM_1 PF00076 287 - 352 2.8e-09 RNA recognition motif
RRM_2 PF04059 716 - 812 5.3e-54 RNA recognition motif 2
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 620, 2699
Acc36I ACCTGC 3 cut(s) 620, 2699, 2843
AccB1I GGYRCC 2 cut(s) 990, 2719
AccB7I CCANNNNNTGG 1 cut(s) 1954
AccI GTMKAC 2 cut(s) 1125, 2387
AccII CGCG 1 cut(s) 2867
AciI CCGC 6 cut(s) 1538, 1626, 1885, 2078, 2326, 2867
AclWI GGATC 5 cut(s) 1138, 1390, 1448, 1753, 2504
AcsI RAATTY 7 cut(s) 280, 1164, 1184, 1544, 1837, 2230, 2604
AcuI CTGAAG 1 cut(s) 30
AcyI GRCGYC 1 cut(s) 991
AfaI GTAC 3 cut(s) 1398, 1455, 2749
AfiI CCNNNNNNNGG 5 cut(s) 1775, 1884, 1954, 2708, 2813
AflII CTTAAG 1 cut(s) 265
AflIII ACRYGT 2 cut(s) 1425, 2106
AjnI CCWGG 8 cut(s) 727, 1276, 1774, 1819, 2038, 2169, 2200, 2755
AloI GAACNNNNNNTCC 2 cut(s) 2827, 2859
Alw21I GWGCWC 3 cut(s) 225, 1298, 1909
Alw26I GTCTC 9 cut(s) 73, 329, 436, 681, 870, 1708, 1987, 2746, 2769
Alw44I GTGCAC 1 cut(s) 221
AlwI GGATC 5 cut(s) 1138, 1390, 1448, 1753, 2504
AlwNI CAGNNNCTG 1 cut(s) 1211
Ama87I CYCGRG 2 cut(s) 406, 1297
AoxI GGCC 6 cut(s) 540, 745, 1321, 1765, 1970, 2698
ApaLI GTGCAC 1 cut(s) 221
ApeKI GCWGC 8 cut(s) 663, 947, 1202, 1333, 1406, 1868, 2280, 2408
ApoI RAATTY 7 cut(s) 280, 1164, 1184, 1544, 1837, 2230, 2604
Asp700I GAANNNNTTC 2 cut(s) 1427, 2306
AspA2I CCTAGG 1 cut(s) 1966
AspLEI GCGC 2 cut(s) 993, 2424
AspS9I GGNCC 8 cut(s) 541, 1766, 1817, 1970, 1987, 2137, 2219, 2699
AsuC2I CCSGG 3 cut(s) 228, 952, 1246
AsuHPI GGTGA 8 cut(s) 184, 644, 800, 1142, 1554, 1833, 2067, 2723
AsuII TTCGAA 1 cut(s) 2310
AvaI CYCGRG 2 cut(s) 406, 1297
AvaII GGWCC 4 cut(s) 1817, 1987, 2137, 2219
AvrII CCTAGG 1 cut(s) 1966
AxyI CCTNAGG 1 cut(s) 1812
BaeGI GKGCMC 3 cut(s) 225, 1716, 2724
BanI GGYRCC 2 cut(s) 990, 2719
BanII GRGCYC 1 cut(s) 1298
BbsI GAAGAC 1 cut(s) 846
Bbv12I GWGCWC 3 cut(s) 225, 1298, 1909
BbvI GCAGC 8 cut(s) 675, 959, 1189, 1345, 1418, 1880, 2292, 2395
BceAI ACGGC 4 cut(s) 1573, 1780, 2146, 2658
BciT130I CCWGG 8 cut(s) 729, 1278, 1776, 1821, 2040, 2171, 2202, 2757
BciVI GTATCC 1 cut(s) 2208
BclI TGATCA 2 cut(s) 2239, 2713
BcnI CCSGG 3 cut(s) 228, 952, 1246
BcoDI GTCTC 9 cut(s) 73, 329, 436, 681, 870, 1708, 1987, 2746, 2769
BfaI CTAG 6 cut(s) 182, 1350, 1449, 1707, 1902, 1967
BfmI CTRYAG 4 cut(s) 627, 1203, 1404, 2850
BfoI RGCGCY 2 cut(s) 994, 2425
BfrI CTTAAG 1 cut(s) 265
BfuAI ACCTGC 3 cut(s) 620, 2699, 2843
BfuI GTATCC 1 cut(s) 2208
BisI GCNGC 8 cut(s) 664, 948, 1203, 1334, 1407, 1869, 2281, 2409
BlnI CCTAGG 1 cut(s) 1966
BlsI GCNGC 8 cut(s) 665, 949, 1204, 1335, 1408, 1870, 2282, 2410
Bme18I GGWCC 4 cut(s) 1817, 1987, 2137, 2219
BmeT110I CYCGRG 2 cut(s) 406, 1297
BmgT120I GGNCC 8 cut(s) 541, 1766, 1817, 1970, 1987, 2137, 2219, 2699
BmiI GGNNCC 7 cut(s) 992, 1606, 1818, 1988, 2220, 2701, 2721
BmrI ACTGGG 1 cut(s) 779
BmuI ACTGGG 1 cut(s) 779
BoxI GACNNNNGTC 1 cut(s) 448
BpiI GAAGAC 1 cut(s) 846
BplI GAGNNNNNCTC 2 cut(s) 1330, 1362
BpmI CTGGAG 5 cut(s) 609, 750, 956, 1299, 2153
Bpu14I TTCGAA 1 cut(s) 2310
BpuEI CTTGAG 3 cut(s) 1006, 1283, 2629
BpuMI CCSGG 3 cut(s) 228, 952, 1246
BsaBI GATNNNNATC 1 cut(s) 1050
BsaHI GRCGYC 1 cut(s) 991
BsaI GGTCTC 1 cut(s) 2746
BsaJI CCNNGG 5 cut(s) 153, 226, 727, 1555, 1966
Bsc4I CCNNNNNNNGG 5 cut(s) 1775, 1884, 1954, 2708, 2813
Bse1I ACTGG 2 cut(s) 774, 1369
Bse21I CCTNAGG 1 cut(s) 1812
Bse3DI GCAATG 4 cut(s) 758, 763, 1938, 2485
Bse8I GATNNNNATC 1 cut(s) 1050
BseBI CCWGG 8 cut(s) 729, 1278, 1776, 1821, 2040, 2171, 2202, 2757
BseDI CCNNGG 5 cut(s) 153, 226, 727, 1555, 1966
BseJI GATNNNNATC 1 cut(s) 1050
BseLI CCNNNNNNNGG 5 cut(s) 1775, 1884, 1954, 2708, 2813
BseMI GCAATG 4 cut(s) 758, 763, 1938, 2485
BseMII CTCAG 6 cut(s) 45, 321, 633, 1029, 1826, 2826
BseNI ACTGG 2 cut(s) 774, 1369
BseRI GAGGAG 3 cut(s) 659, 747, 2798
BseSI GKGCMC 3 cut(s) 225, 1716, 2724
BseXI GCAGC 8 cut(s) 675, 959, 1189, 1345, 1418, 1880, 2292, 2395
BseYI CCCAGC 1 cut(s) 1927
Bsh1236I CGCG 1 cut(s) 2867
BshFI GGCC 6 cut(s) 542, 747, 1323, 1767, 1972, 2700
BshNI GGYRCC 2 cut(s) 990, 2719
BsiHKAI GWGCWC 3 cut(s) 225, 1298, 1909
BsiHKCI CYCGRG 2 cut(s) 406, 1297
BsiSI CCGG 4 cut(s) 228, 952, 994, 1245
BsiWI CGTACG 1 cut(s) 2747
BslFI GGGAC 1 cut(s) 2000
BslI CCNNNNNNNGG 5 cut(s) 1775, 1884, 1954, 2708, 2813
BsmAI GTCTC 9 cut(s) 73, 329, 436, 681, 870, 1708, 1987, 2746, 2769
BsmBI CGTCTC 1 cut(s) 681
BsmFI GGGAC 1 cut(s) 2000
BsmI GAATGC 5 cut(s) 961, 1059, 2067, 2080, 2492
BsnI GGCC 6 cut(s) 542, 747, 1323, 1767, 1972, 2700
Bso31I GGTCTC 1 cut(s) 2746
BsoBI CYCGRG 2 cut(s) 406, 1297
Bsp119I TTCGAA 1 cut(s) 2310
Bsp1286I GDGCHC 5 cut(s) 225, 1298, 1716, 1909, 2724
Bsp1407I TGTACA 1 cut(s) 1396
Bsp143I GATC 8 cut(s) 721, 1143, 1382, 1440, 1745, 2239, 2509, 2713
BspACI CCGC 6 cut(s) 1538, 1626, 1885, 2078, 2326, 2867
BspANI GGCC 6 cut(s) 542, 747, 1323, 1767, 1972, 2700
BspCNI CTCAG 6 cut(s) 46, 320, 634, 1030, 1825, 2825
BspFNI CGCG 1 cut(s) 2867
BspHI TCATGA 1 cut(s) 921
BspLI GGNNCC 7 cut(s) 992, 1606, 1818, 1988, 2220, 2701, 2721
BspMAI CTGCAG 4 cut(s) 631, 1207, 1408, 2854
BspMI ACCTGC 3 cut(s) 620, 2699, 2843
BspPI GGATC 5 cut(s) 1138, 1390, 1448, 1753, 2504
BspT104I TTCGAA 1 cut(s) 2310
BspT107I GGYRCC 2 cut(s) 990, 2719
BspTI CTTAAG 1 cut(s) 265
BspTNI GGTCTC 1 cut(s) 2746
BsrDI GCAATG 4 cut(s) 758, 763, 1938, 2485
BsrGI TGTACA 1 cut(s) 1396
BsrI ACTGG 2 cut(s) 774, 1369
BssECI CCNNGG 5 cut(s) 153, 226, 727, 1555, 1966
BssMI GATC 8 cut(s) 721, 1143, 1382, 1440, 1745, 2239, 2509, 2713
BssNAI GTATAC 1 cut(s) 2388
BssNI GRCGYC 1 cut(s) 991
BssT1I CCWWGG 2 cut(s) 153, 1966
Bst1107I GTATAC 1 cut(s) 2388
Bst2UI CCWGG 8 cut(s) 729, 1278, 1776, 1821, 2040, 2171, 2202, 2757
Bst4CI ACNGT 5 cut(s) 172, 295, 387, 1130, 2307
Bst6I CTCTTC 3 cut(s) 501, 1244, 2690
BstACI GRCGYC 1 cut(s) 991
BstAFI CTTAAG 1 cut(s) 265
BstAPI GCANNNNNTGC 2 cut(s) 1211, 2591
BstAUI TGTACA 1 cut(s) 1396
BstBI TTCGAA 1 cut(s) 2310
BstC8I GCNNGC 5 cut(s) 32, 749, 901, 1534, 1538
BstDEI CTNAG 7 cut(s) 54, 307, 642, 1038, 1812, 2812, 2859
BstDSI CCRYGG 1 cut(s) 1555
BstFNI CGCG 1 cut(s) 2867
BstH2I RGCGCY 2 cut(s) 994, 2425
BstHHI GCGC 2 cut(s) 993, 2424
BstKTI GATC 8 cut(s) 724, 1146, 1385, 1443, 1748, 2242, 2512, 2716
BstMAI GTCTC 9 cut(s) 73, 329, 436, 681, 870, 1708, 1987, 2746, 2769
BstMBI GATC 8 cut(s) 721, 1143, 1382, 1440, 1745, 2239, 2509, 2713
BstNI CCWGG 8 cut(s) 729, 1278, 1776, 1821, 2040, 2171, 2202, 2757
BstNSI RCATGY 4 cut(s) 112, 125, 1429, 2110
BstPAI GACNNNNGTC 1 cut(s) 448
BstSFI CTRYAG 4 cut(s) 627, 1203, 1404, 2850
BstSLI GKGCMC 3 cut(s) 225, 1716, 2724
BstUI CGCG 1 cut(s) 2867
BstV1I GCAGC 8 cut(s) 675, 959, 1189, 1345, 1418, 1880, 2292, 2395
BstV2I GAAGAC 1 cut(s) 846
BstX2I RGATCY 3 cut(s) 1143, 1382, 1440
BstXI CCANNNNNNTGG 1 cut(s) 551
BstYI RGATCY 3 cut(s) 1143, 1382, 1440
BstZ17I GTATAC 1 cut(s) 2388
Bsu36I CCTNAGG 1 cut(s) 1812
BsuI GTATCC 1 cut(s) 2208
BsuRI GGCC 6 cut(s) 542, 747, 1323, 1767, 1972, 2700
BtgI CCRYGG 1 cut(s) 1555
BtgZI GCGATG 2 cut(s) 974, 2683
BtsI GCAGTG 3 cut(s) 624, 673, 1645
BtsIMutI CAGTG 4 cut(s) 624, 673, 1645, 2691
BveI ACCTGC 3 cut(s) 620, 2699, 2843
Cac8I GCNNGC 5 cut(s) 32, 749, 901, 1534, 1538
CaiI CAGNNNCTG 1 cut(s) 1211
CciI TCATGA 1 cut(s) 921
CfoI GCGC 2 cut(s) 993, 2424
Cfr13I GGNCC 8 cut(s) 541, 1766, 1817, 1970, 1987, 2137, 2219, 2699
Csp6I GTAC 3 cut(s) 1397, 1454, 2748
CspCI CAANNNNNGTGG 2 cut(s) 892, 927
CviQI GTAC 3 cut(s) 1397, 1454, 2748
DdeI CTNAG 7 cut(s) 54, 307, 642, 1038, 1812, 2812, 2859
DinI GGCGCC 1 cut(s) 992
DpnI GATC 8 cut(s) 723, 1145, 1384, 1442, 1747, 2241, 2511, 2715
DpnII GATC 8 cut(s) 721, 1143, 1382, 1440, 1745, 2239, 2509, 2713
Eam1104I CTCTTC 3 cut(s) 501, 1244, 2690
EarI CTCTTC 3 cut(s) 501, 1244, 2690
Ecl136II GAGCTC 1 cut(s) 1296
Eco130I CCWWGG 2 cut(s) 153, 1966
Eco24I GRGCYC 1 cut(s) 1298
Eco31I GGTCTC 1 cut(s) 2746
Eco32I GATATC 2 cut(s) 927, 940
Eco47I GGWCC 4 cut(s) 1817, 1987, 2137, 2219
Eco53kI GAGCTC 1 cut(s) 1296
Eco57I CTGAAG 1 cut(s) 30
Eco81I CCTNAGG 1 cut(s) 1812
Eco88I CYCGRG 2 cut(s) 406, 1297
EcoICRI GAGCTC 1 cut(s) 1296
EcoO109I RGGNCCY 2 cut(s) 1970, 2219
EcoRI GAATTC 3 cut(s) 1164, 2230, 2604
EcoRII CCWGG 8 cut(s) 727, 1276, 1774, 1819, 2038, 2169, 2200, 2755
EcoRV GATATC 2 cut(s) 927, 940
EcoT14I CCWWGG 2 cut(s) 153, 1966
EcoT22I ATGCAT 5 cut(s) 64, 1792, 1893, 2026, 2494
EcoT38I GRGCYC 1 cut(s) 1298
EgeI GGCGCC 1 cut(s) 992
EheI GGCGCC 1 cut(s) 992
ErhI CCWWGG 2 cut(s) 153, 1966
Esp3I CGTCTC 1 cut(s) 681
FaqI GGGAC 1 cut(s) 2000
FauI CCCGC 1 cut(s) 1545
FauNDI CATATG 4 cut(s) 1849, 1917, 2002, 2437
FbaI TGATCA 2 cut(s) 2239, 2713
FblI GTMKAC 2 cut(s) 1125, 2387
Fnu4HI GCNGC 8 cut(s) 664, 948, 1203, 1334, 1407, 1869, 2281, 2409
FriOI GRGCYC 1 cut(s) 1298
Fsp4HI GCNGC 8 cut(s) 664, 948, 1203, 1334, 1407, 1869, 2281, 2409
FspBI CTAG 6 cut(s) 182, 1350, 1449, 1707, 1902, 1967
GlaI GCGC 2 cut(s) 992, 2423
GluI GCNGC 8 cut(s) 664, 948, 1203, 1334, 1407, 1869, 2281, 2409
GsaI CCCAGC 1 cut(s) 1931
GsuI CTGGAG 5 cut(s) 609, 750, 956, 1299, 2153
HaeII RGCGCY 2 cut(s) 994, 2425
HaeIII GGCC 6 cut(s) 542, 747, 1323, 1767, 1972, 2700
HapII CCGG 4 cut(s) 228, 952, 994, 1245
HhaI GCGC 2 cut(s) 993, 2424
Hin1I GRCGYC 1 cut(s) 991
Hin6I GCGC 2 cut(s) 991, 2422
HinP1I GCGC 2 cut(s) 991, 2422
HindIII AAGCTT 2 cut(s) 998, 1259
HpaII CCGG 4 cut(s) 228, 952, 994, 1245
HphI GGTGA 8 cut(s) 184, 644, 800, 1142, 1554, 1833, 2067, 2723
Hpy166II GTNNAC 8 cut(s) 223, 791, 1126, 1399, 1454, 1762, 2388, 2804
Hpy8I GTNNAC 8 cut(s) 223, 791, 1126, 1399, 1454, 1762, 2388, 2804
Hpy99I CGWCG 1 cut(s) 1753
HpyAV CCTTC 7 cut(s) 350, 569, 807, 1044, 2270, 2572, 2734
HpyCH4III ACNGT 5 cut(s) 172, 295, 387, 1130, 2307
HpyCH4IV ACGT 2 cut(s) 21, 2254
HpyF3I CTNAG 7 cut(s) 54, 307, 642, 1038, 1812, 2812, 2859
HpySE526I ACGT 2 cut(s) 21, 2254
Hsp92I GRCGYC 1 cut(s) 991
HspAI GCGC 2 cut(s) 991, 2422
KasI GGCGCC 1 cut(s) 990
Ksp22I TGATCA 2 cut(s) 2239, 2713
Kzo9I GATC 8 cut(s) 721, 1143, 1382, 1440, 1745, 2239, 2509, 2713
LmnI GCTCC 2 cut(s) 1293, 1414
Lsp1109I GCAGC 8 cut(s) 675, 959, 1189, 1345, 1418, 1880, 2292, 2395
MaeI CTAG 6 cut(s) 182, 1350, 1449, 1707, 1902, 1967
MaeII ACGT 2 cut(s) 21, 2254
MaeIII GTNAC 5 cut(s) 135, 310, 592, 830, 1360
MalI GATC 8 cut(s) 723, 1145, 1384, 1442, 1747, 2241, 2511, 2715
MboI GATC 8 cut(s) 721, 1143, 1382, 1440, 1745, 2239, 2509, 2713
MfeI CAATTG 2 cut(s) 2412, 2457
MflI RGATCY 3 cut(s) 1143, 1382, 1440
MhlI GDGCHC 5 cut(s) 225, 1298, 1716, 1909, 2724
Mly113I GGCGCC 1 cut(s) 991
MlyI GAGTC 9 cut(s) 299, 375, 836, 880, 1496, 1526, 1710, 2160, 2809
MmeI TCCRAC 1 cut(s) 2067
Mph1103I ATGCAT 5 cut(s) 64, 1792, 1893, 2026, 2494
MroXI GAANNNNTTC 2 cut(s) 1427, 2306
MslI CAYNNNNRTG 6 cut(s) 783, 1064, 1785, 2121, 2157, 2501
MspA1I CMGCKG 3 cut(s) 704, 1540, 1885
MspCI CTTAAG 1 cut(s) 265
MspI CCGG 4 cut(s) 228, 952, 994, 1245
MunI CAATTG 2 cut(s) 2412, 2457
Mva1269I GAATGC 5 cut(s) 961, 1059, 2067, 2080, 2492
MvaI CCWGG 8 cut(s) 729, 1278, 1776, 1821, 2040, 2171, 2202, 2757
MvnI CGCG 1 cut(s) 2867
NarI GGCGCC 1 cut(s) 991
NciI CCSGG 3 cut(s) 228, 952, 1246
NdeI CATATG 4 cut(s) 1849, 1917, 2002, 2437
NdeII GATC 8 cut(s) 721, 1143, 1382, 1440, 1745, 2239, 2509, 2713
NlaIV GGNNCC 7 cut(s) 992, 1606, 1818, 1988, 2220, 2701, 2721
NmeAIII GCCGAG 1 cut(s) 1844
NmuCI GTSAC 1 cut(s) 135
NsiI ATGCAT 5 cut(s) 64, 1792, 1893, 2026, 2494
NspI RCATGY 4 cut(s) 112, 125, 1429, 2110
NspV TTCGAA 1 cut(s) 2310
PaeR7I CTCGAG 1 cut(s) 406
PagI TCATGA 1 cut(s) 921
PaqCI CACCTGC 2 cut(s) 620, 2699
PciI ACATGT 2 cut(s) 1425, 2106
PctI GAATGC 5 cut(s) 961, 1059, 2067, 2080, 2492
PdmI GAANNNNTTC 2 cut(s) 1427, 2306
PfeI GAWTC 5 cut(s) 521, 1082, 1208, 1860, 2012
Pfl23II CGTACG 1 cut(s) 2747
PflMI CCANNNNNTGG 1 cut(s) 1954
PfoI TCCNGGA 3 cut(s) 1276, 1774, 2200
PkrI GCNGC 8 cut(s) 665, 949, 1204, 1335, 1408, 1870, 2282, 2410
PleI GAGTC 9 cut(s) 299, 374, 836, 880, 1495, 1525, 1709, 2160, 2808
PluTI GGCGCC 1 cut(s) 994
PpsI GAGTC 9 cut(s) 299, 374, 836, 880, 1495, 1525, 1709, 2160, 2808
PpuMI RGGWCCY 1 cut(s) 2219
PscI ACATGT 2 cut(s) 1425, 2106
PshAI GACNNNNGTC 1 cut(s) 448
Psp124BI GAGCTC 1 cut(s) 1298
Psp5II RGGWCCY 1 cut(s) 2219
Psp6I CCWGG 8 cut(s) 727, 1276, 1774, 1819, 2038, 2169, 2200, 2755
PspFI CCCAGC 1 cut(s) 1927
PspGI CCWGG 8 cut(s) 727, 1276, 1774, 1819, 2038, 2169, 2200, 2755
PspLI CGTACG 1 cut(s) 2747
PspN4I GGNNCC 7 cut(s) 992, 1606, 1818, 1988, 2220, 2701, 2721
PspPI GGNCC 8 cut(s) 541, 1766, 1817, 1970, 1987, 2137, 2219, 2699
PspPPI RGGWCCY 1 cut(s) 2219
PstI CTGCAG 4 cut(s) 631, 1207, 1408, 2854
PstNI CAGNNNCTG 1 cut(s) 1211
PsuI RGATCY 3 cut(s) 1143, 1382, 1440
PvuII CAGCTG 1 cut(s) 704
RsaI GTAC 3 cut(s) 1398, 1455, 2749
RsaNI GTAC 3 cut(s) 1397, 1454, 2748
RseI CAYNNNNRTG 6 cut(s) 783, 1064, 1785, 2121, 2157, 2501
SacI GAGCTC 1 cut(s) 1298
SatI GCNGC 8 cut(s) 664, 948, 1203, 1334, 1407, 1869, 2281, 2409
Sau3AI GATC 8 cut(s) 721, 1143, 1382, 1440, 1745, 2239, 2509, 2713
Sau96I GGNCC 8 cut(s) 541, 1766, 1817, 1970, 1987, 2137, 2219, 2699
SchI GAGTC 9 cut(s) 299, 375, 836, 880, 1496, 1526, 1710, 2160, 2809
SduI GDGCHC 5 cut(s) 225, 1298, 1716, 1909, 2724
SfcI CTRYAG 4 cut(s) 627, 1203, 1404, 2850
SfoI GGCGCC 1 cut(s) 992
Sfr274I CTCGAG 1 cut(s) 406
SfuI TTCGAA 1 cut(s) 2310
SinI GGWCC 4 cut(s) 1817, 1987, 2137, 2219
SlaI CTCGAG 1 cut(s) 406
SmiMI CAYNNNNRTG 6 cut(s) 783, 1064, 1785, 2121, 2157, 2501
SmlI CTYRAG 5 cut(s) 265, 406, 985, 1262, 2644
SmoI CTYRAG 5 cut(s) 265, 406, 985, 1262, 2644
SsiI CCGC 6 cut(s) 1538, 1626, 1885, 2078, 2326, 2867
SspDI GGCGCC 1 cut(s) 990
SspI AATATT 1 cut(s) 2374
SspMI CTAG 6 cut(s) 182, 1350, 1449, 1707, 1902, 1967
SstI GAGCTC 1 cut(s) 1298
StyI CCWWGG 2 cut(s) 153, 1966
TaaI ACNGT 5 cut(s) 172, 295, 387, 1130, 2307
TaiI ACGT 2 cut(s) 24, 2257
TaqI TCGA 7 cut(s) 287, 407, 800, 1182, 2310, 2602, 2767
TatI WGTACW 1 cut(s) 1396
TfiI GAWTC 5 cut(s) 521, 1082, 1208, 1860, 2012
TscAI CASTG 4 cut(s) 631, 673, 1645, 2698
TseFI GTSAC 1 cut(s) 135
TseI GCWGC 8 cut(s) 663, 947, 1202, 1333, 1406, 1868, 2280, 2408
Tsp45I GTSAC 1 cut(s) 135
TspGWI ACGGA 2 cut(s) 1136, 1401
TspRI CASTG 4 cut(s) 631, 673, 1645, 2698
Van91I CCANNNNNTGG 1 cut(s) 1954
Vha464I CTTAAG 1 cut(s) 265
VneI GTGCAC 1 cut(s) 221
VpaK11BI GGWCC 4 cut(s) 1817, 1987, 2137, 2219
XapI RAATTY 7 cut(s) 280, 1164, 1184, 1544, 1837, 2230, 2604
XceI RCATGY 4 cut(s) 112, 125, 1429, 2110
XcmI CCANNNNNNNNNTGG 1 cut(s) 1827
XhoI CTCGAG 1 cut(s) 406
XmaJI CCTAGG 1 cut(s) 1966
XmiI GTMKAC 2 cut(s) 1125, 2387
XmnI GAANNNNTTC 2 cut(s) 1427, 2306
XspI CTAG 6 cut(s) 182, 1350, 1449, 1707, 1902, 1967
Zsp2I ATGCAT 5 cut(s) 64, 1792, 1893, 2026, 2494
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.