Rw4G024890

Protein MEI2-like 4 isoform X1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
OG0001846
Physical Location & Seq
Reverse (-)
50808593 .. 50814519
5927 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G024890.1

Sequence Viewer

Length: 2880 bp
ATGCCATCTGAAGTAATGGACATTAAGGGCCTGTCATCTTCTTCGTTCTTCTCCGAAGATTTCCCAAACGAGAGGCAGGTTGGGTTTTGGAAGTCAGATAACATGCCAGATAAACATGCCGGTGAGAAGTCACTTGCATCATCATCTCTTGAGAAGTGTCAGACGGTGAAATCTCTGGATCACCCTGATTTTTTCTTAATGCCAGAACAAAAGGTGAAACCCAGCTTCAATAGACAAGCAGTTGGGGCAGAGAGAGCCTTAAGTCATTCGTTGAATTTATCAAGAGCCGTGAGCCTTGACTCGGGAGTAATATCTAATGTAAATGTTGAGACAGCATCTTACTATGCGGAAGGTGGCAAAGTCAATATGATGGGAACGCAGTATGAGAGTAGCCTTTTCTCTAGTTCATTATCTGAGTTGTTTAGTAGGAAGTTGAGACTATCGTCAAACAATACACAATATGGACATTCTGTTGATAGTGTTGCCTCAAACTATGAGGAAGAGGAAGTTTTTGAGTCCCTTGAAGAAATGGAGGCCCAAACCATCGGAAACCTTCTCCCTGATGATGATGAGTTGCTTTCTGGAGTTACCGATGGGCTCGAGTATAATGTTCCACTCACTGCTGGGGATGATATTGAGGAGTTGGATTTTTTTAGCAGTAGTGGAGGGATGGATTTGGGAGACGATGGTCTGTCAGCTGGACTAAACAATTCTGATTGTACTGGAGGAGTTTCGAATGTTTTGCAATGCAGTGGTTCAGTAGCTGGAGAGCACCCTAATGGTGAACACCCTTCTAGGACATTGTTTGTGAGAAATATAAATAGCAACATTGAAGACTCTGAGTTGAGAACCCTGTTTGAGCAATACGGAGACATTCGGACTCTTTATACAGCCTGCAAACACCGTGGGTTTGTTATGATATCATATTATGATATTAGAGCAGCCTGGAATGCGATGAAAGCACTCCAGAACAAACCATTGAGGCGCCGGAAGCTTGACATTCATTACTCGATTCCAAAGGACAATCCTTCTGAGAAAGATGTTAATCAGGGCACTCTTGTGGTGTTTAACCTTGATTCTTCTGTTTCTAATGATGAACTTAGTGAGCTTTTTGGTGTCTATGGTGAAATCAAAGAGATCCGTGAAACACCAAATACAAGTCATCACAAGTTTATCGAATTTTATGATGTTAGAGCTGCAGAATCTGCTCTTAATGCCATGAACAGGAGTGATATAGCCGGGAAGAGGATTAAGCTTGAGCCAAGTCGTCCTGGAGGTGCAAAAAGGAGCTCAGGGCTGCAGTTACCTCAAGAGTTAGAGCAGGATGATTGTGGCCTTTATTTTCAGCAGAGTAGTCCTCCTAGTAACTCTGTTACTGGTTTCTCTGATAATGGAGCTATTATGACTGTACACTCTGCAGCTCCATCTTTTGAGAACATGTTCCATCATGGGATCTCATCTAGTGTACCCAACAGCCTATCTTCTATGATGAGAGTTGAATCAGCAGTCAGTCAGTCTGGCCTTACTGAGTCCATTCATTCAGCAAGCCCGCTGAAATTTGACATCCACGGCTCACCAGCTTTTCATCCTCATTCACTTCCAGAGTATCATAATGGTTTAACTAATGGCATCAACTGCAATTCAACAGGCAGTGTATCTGCAAGTATCAATGTCAGACCACCAGATAACAGGCACTTTACCAGAGTCTCAAGTGGGCACTCACGTGAACTTAATGATAGTGCTTTTGGATCTATGGTTAACGTGAACTGCCCTATTCCTGGACATCATTATGCATGGAACAATTCCTTTCAGTCTCAGGCTCCAGGAATGATGTGGCCAAACTCACCATCATTTGTTAATGGAATTTCGGCAGCCCATCGCTCACAGCGGATGCATGGACTTCCTAGAGCACCATCTCATATGTTAAACGCAGCAATGCCCATAAATAAACATCATGTGGGTTCAGCACCAGGGGCTAACCCAATGTGGGACCGGAGACAAGCATATGCAGGGGAATCCCCCGAGTCATCTGGATTTCATCCAGGCTCTCTTGGGAATATGAGAATGCCAAATAACTCACCTCATTCGTTGGAATTTGTTTCTCATAACATGTTTCCTCATGTTAATGGAAATGGCATGGACCTGCCAATTCCCCACAAAAATGTAGGACTCCAGGCCCATCATCAGAGGTGCATGATGTATCCTGGAAGAAGTCAGATGGTTCCTGTTATGAATTCATTTGATCAACCTACTGAACGTCCGAGAAGTCGTAGAAATGAAGGCAGCTCTAATCAGGTTGACAACAAGAAACAGTATGAACTTGATATTGACCGCATTATGCGAGGGGATGACAACAGAACAACACTTATGATAAAGAATATTCCTAACAAGTATACCTCAAAGATGCTTTTGGCTGCAATCGATGAGCGCCATCGTGGAACATATGATTTCATTTATCTGCCAATTGATTTTAAGAACAAATGCAATGTGGGGTATGCATTCATCAATATGACTGATCCGAGACAGATTGTTCCATTTTATCAGTCATTCAATGGGAAGAAATGGGAGAAGTTTAATAGTGAGAAGGTGGCATCAATTGCTTATGCTCGAATTCAAGGCAAAGCTGCTCTGATTGCACATTTTCAGAACTCAAGCCTGATGAATGAGGATAAGCGATGCCGTCCCATTCTCTTCAATACTGATGGCCCCAATGCAGGTGATCAGGTGCCTTTCCCGATGGGTGTTAATGTTCGTACGAGACCCGGAAAGTCTCGAACAACCACCCAGGAGGAGAGCCATGGAGGGAGCCCACCGAACTCAGGAGATGGGGAACATTCTTGTAATGGAGGATCATCTGCAGGTTCCAAGGACTCGGACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RRM_1 RRM_2

Protein Analysis

959

Amino Acids

105.71

Weight (kDa)

5.99

Isoelectric Point (pI)

52.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RRM_1 PF00076 268 - 332 1.7e-09 RNA recognition motif
RRM_5 PF13893 350 - 426 3.7e-06 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
RRM_1 PF00076 353 - 418 2.3e-10 RNA recognition motif
RRM_2 PF04059 786 - 882 8.2e-54 RNA recognition motif 2
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2705
Acc36I ACCTGC 4 cut(s) 67, 2151, 2705, 2849
AccB1I GGYRCC 2 cut(s) 984, 2725
AccI GTMKAC 1 cut(s) 2393
AciI CCGC 4 cut(s) 347, 1550, 1888, 2332
AclWI GGATC 6 cut(s) 186, 1132, 1460, 1756, 2510, 2857
AcoI YGGCCR 1 cut(s) 1835
AcsI RAATTY 7 cut(s) 274, 1178, 1556, 1863, 2093, 2233, 2610
AcuI CTGAAG 1 cut(s) 30
AcvI CACGTG 1 cut(s) 1724
AcyI GRCGYC 1 cut(s) 985
AfaI GTAC 4 cut(s) 721, 1410, 1467, 2755
AfiI CCNNNNNNNGG 7 cut(s) 301, 1224, 1245, 1778, 1987, 2714, 2819
AflII CTTAAG 1 cut(s) 259
AflIII ACRYGT 2 cut(s) 1437, 2109
AgsI TTSAA 9 cut(s) 229, 274, 524, 833, 1499, 1644, 2551, 2615, 2695
AjnI CCWGG 9 cut(s) 944, 1270, 1777, 1822, 1969, 2041, 2172, 2203, 2784
AleI CACNNNNGTG 2 cut(s) 1058, 1722
Alw21I GWGCWC 3 cut(s) 774, 1292, 1912
AlwI GGATC 6 cut(s) 186, 1132, 1460, 1756, 2510, 2857
AlwNI CAGNNNCTG 2 cut(s) 764, 1205
Ama87I CYCGRG 3 cut(s) 301, 599, 2021
AoxI GGCC 7 cut(s) 28, 534, 1333, 1519, 1835, 2175, 2704
ApeKI GCWGC 9 cut(s) 941, 1196, 1297, 1418, 1871, 1931, 2283, 2414, 2624
ApoI RAATTY 7 cut(s) 274, 1178, 1556, 1863, 2093, 2233, 2610
Asp700I GAANNNNTTC 1 cut(s) 1439
AspLEI GCGC 2 cut(s) 987, 2430
AspS9I GGNCC 6 cut(s) 28, 535, 1990, 2140, 2176, 2705
AsuC2I CCSGG 2 cut(s) 1240, 2763
AsuII TTCGAA 1 cut(s) 734
AvaI CYCGRG 3 cut(s) 301, 599, 2021
AvaII GGWCC 2 cut(s) 1990, 2140
BaeGI GKGCMC 2 cut(s) 1055, 1719
BalI TGGCCA 1 cut(s) 1837
BanI GGYRCC 2 cut(s) 984, 2725
BanII GRGCYC 3 cut(s) 600, 1292, 2810
BbrPI CACGTG 1 cut(s) 1724
BbsI GAAGAC 1 cut(s) 840
Bbv12I GWGCWC 3 cut(s) 774, 1292, 1912
BbvI GCAGC 9 cut(s) 953, 1183, 1284, 1430, 1883, 1943, 2295, 2401, 2611
BceAI ACGGC 3 cut(s) 272, 1585, 2664
BcgI CGANNNNNNTGC 2 cut(s) 724, 758
BciT130I CCWGG 9 cut(s) 946, 1272, 1779, 1824, 1971, 2043, 2174, 2205, 2786
BciVI GTATCC 1 cut(s) 2211
BclI TGATCA 2 cut(s) 2242, 2719
BcnI CCSGG 2 cut(s) 1240, 2763
BfaI CTAG 5 cut(s) 402, 795, 1362, 1461, 1905
BfmI CTRYAG 4 cut(s) 1197, 1298, 1416, 2856
BfoI RGCGCY 2 cut(s) 988, 2431
BfrI CTTAAG 1 cut(s) 259
BfuAI ACCTGC 4 cut(s) 67, 2151, 2705, 2849
BfuI GTATCC 1 cut(s) 2211
BisI GCNGC 9 cut(s) 942, 1197, 1298, 1419, 1872, 1932, 2284, 2415, 2625
BlsI GCNGC 9 cut(s) 943, 1198, 1299, 1420, 1873, 1933, 2285, 2416, 2626
Bme18I GGWCC 2 cut(s) 1990, 2140
BmeT110I CYCGRG 3 cut(s) 301, 599, 2021
BmgT120I GGNCC 6 cut(s) 28, 535, 1990, 2140, 2176, 2705
BmiI GGNNCC 8 cut(s) 986, 1821, 1991, 2223, 2707, 2727, 2807, 2863
BmsI GCATC 7 cut(s) 146, 344, 1638, 1881, 2394, 2600, 2666
BoxI GACNNNNGTC 2 cut(s) 442, 687
BpiI GAAGAC 1 cut(s) 840
BplI GAGNNNNNCTC 2 cut(s) 1342, 1374
BpmI CTGGAG 7 cut(s) 603, 744, 786, 950, 1293, 1806, 2156
Bpu10I CCTNAGC 1 cut(s) 1291
Bpu14I TTCGAA 1 cut(s) 734
BpuEI CTTGAG 5 cut(s) 170, 1277, 1293, 1693, 2635
BpuMI CCSGG 2 cut(s) 1240, 2763
Bsa29I ATCGAT 1 cut(s) 2421
BsaAI YACGTR 1 cut(s) 1724
BsaBI GATNNNNATC 1 cut(s) 1044
BsaHI GRCGYC 1 cut(s) 985
BsaI GGTCTC 1 cut(s) 2752
BsaJI CCNNGG 6 cut(s) 904, 1567, 1970, 2784, 2797, 2865
BsaWI WCCGGW 1 cut(s) 1992
Bsc4I CCNNNNNNNGG 7 cut(s) 301, 1224, 1245, 1778, 1987, 2714, 2819
Bse118I RCCGGY 1 cut(s) 119
Bse1I ACTGG 2 cut(s) 727, 1381
Bse3DI GCAATG 3 cut(s) 752, 1941, 2491
Bse8I GATNNNNATC 1 cut(s) 1044
BseBI CCWGG 9 cut(s) 946, 1272, 1779, 1824, 1971, 2043, 2174, 2205, 2786
BseCI ATCGAT 1 cut(s) 2421
BseDI CCNNGG 6 cut(s) 904, 1567, 1970, 2784, 2797, 2865
BseGI GGATG 8 cut(s) 634, 675, 1330, 1563, 1585, 1896, 2038, 2353
BseJI GATNNNNATC 1 cut(s) 1044
BseLI CCNNNNNNNGG 7 cut(s) 301, 1224, 1245, 1778, 1987, 2714, 2819
BseMI GCAATG 3 cut(s) 752, 1941, 2491
BseMII CTCAG 7 cut(s) 405, 831, 1023, 1305, 1518, 1829, 2832
BseNI ACTGG 2 cut(s) 727, 1381
BseRI GAGGAG 3 cut(s) 653, 741, 2804
BseSI GKGCMC 2 cut(s) 1055, 1719
BseXI GCAGC 9 cut(s) 953, 1183, 1284, 1430, 1883, 1943, 2295, 2401, 2611
BseYI CCCAGC 2 cut(s) 221, 623
BshFI GGCC 7 cut(s) 30, 536, 1335, 1521, 1837, 2177, 2706
BshNI GGYRCC 2 cut(s) 984, 2725
BshVI ATCGAT 1 cut(s) 2421
BsiHKAI GWGCWC 3 cut(s) 774, 1292, 1912
BsiHKCI CYCGRG 3 cut(s) 301, 599, 2021
BsiSI CCGG 5 cut(s) 120, 988, 1239, 1993, 2763
BsiWI CGTACG 1 cut(s) 2753
BslFI GGGAC 3 cut(s) 502, 2003, 2667
BslI CCNNNNNNNGG 7 cut(s) 301, 1224, 1245, 1778, 1987, 2714, 2819
BsmBI CGTCTC 1 cut(s) 675
BsmFI GGGAC 3 cut(s) 502, 2003, 2667
BsmI GAATGC 3 cut(s) 955, 2070, 2498
BsnI GGCC 7 cut(s) 30, 536, 1335, 1521, 1837, 2177, 2706
Bso31I GGTCTC 1 cut(s) 2752
BsoBI CYCGRG 3 cut(s) 301, 599, 2021
Bsp119I TTCGAA 1 cut(s) 734
Bsp1286I GDGCHC 7 cut(s) 600, 774, 1055, 1292, 1719, 1912, 2810
Bsp1407I TGTACA 1 cut(s) 1408
Bsp143I GATC 8 cut(s) 178, 1137, 1452, 1748, 2242, 2515, 2719, 2849
Bsp19I CCATGG 1 cut(s) 2797
BspACI CCGC 4 cut(s) 347, 1550, 1888, 2332
BspANI GGCC 7 cut(s) 30, 536, 1335, 1521, 1837, 2177, 2706
BspCNI CTCAG 7 cut(s) 406, 832, 1024, 1304, 1519, 1828, 2831
BspDI ATCGAT 1 cut(s) 2421
BspLI GGNNCC 8 cut(s) 986, 1821, 1991, 2223, 2707, 2727, 2807, 2863
BspMAI CTGCAG 4 cut(s) 1201, 1302, 1420, 2860
BspMI ACCTGC 4 cut(s) 67, 2151, 2705, 2849
BspPI GGATC 6 cut(s) 186, 1132, 1460, 1756, 2510, 2857
BspT104I TTCGAA 1 cut(s) 734
BspT107I GGYRCC 2 cut(s) 984, 2725
BspTI CTTAAG 1 cut(s) 259
BspTNI GGTCTC 1 cut(s) 2752
BsrDI GCAATG 3 cut(s) 752, 1941, 2491
BsrFI RCCGGY 1 cut(s) 119
BsrGI TGTACA 1 cut(s) 1408
BsrI ACTGG 2 cut(s) 727, 1381
BssAI RCCGGY 1 cut(s) 119
BssECI CCNNGG 6 cut(s) 904, 1567, 1970, 2784, 2797, 2865
BssMI GATC 8 cut(s) 178, 1137, 1452, 1748, 2242, 2515, 2719, 2849
BssNAI GTATAC 1 cut(s) 2394
BssNI GRCGYC 1 cut(s) 985
BssT1I CCWWGG 2 cut(s) 2797, 2865
Bst1107I GTATAC 1 cut(s) 2394
Bst2UI CCWGG 9 cut(s) 946, 1272, 1779, 1824, 1971, 2043, 2174, 2205, 2786
Bst4CI ACNGT 4 cut(s) 166, 905, 1408, 2313
Bst6I CTCTTC 3 cut(s) 495, 1238, 2696
BstACI GRCGYC 1 cut(s) 985
BstAFI CTTAAG 1 cut(s) 259
BstAPI GCANNNNNTGC 3 cut(s) 1205, 1635, 2597
BstAUI TGTACA 1 cut(s) 1408
BstBAI YACGTR 1 cut(s) 1724
BstBI TTCGAA 1 cut(s) 734
BstC8I GCNNGC 3 cut(s) 895, 1546, 1550
BstDEI CTNAG 8 cut(s) 414, 840, 1032, 1100, 1291, 1527, 1815, 2818
BstDSI CCRYGG 3 cut(s) 904, 1567, 2797
BstF5I GGATG 8 cut(s) 634, 675, 1330, 1563, 1585, 1896, 2038, 2353
BstH2I RGCGCY 2 cut(s) 988, 2431
BstHHI GCGC 2 cut(s) 987, 2430
BstKTI GATC 8 cut(s) 181, 1140, 1455, 1751, 2245, 2518, 2722, 2852
BstMBI GATC 8 cut(s) 178, 1137, 1452, 1748, 2242, 2515, 2719, 2849
BstNI CCWGG 9 cut(s) 946, 1272, 1779, 1824, 1971, 2043, 2174, 2205, 2786
BstNSI RCATGY 4 cut(s) 106, 119, 1441, 2113
BstPAI GACNNNNGTC 2 cut(s) 442, 687
BstSFI CTRYAG 4 cut(s) 1197, 1298, 1416, 2856
BstSLI GKGCMC 2 cut(s) 1055, 1719
BstV1I GCAGC 9 cut(s) 953, 1183, 1284, 1430, 1883, 1943, 2295, 2401, 2611
BstV2I GAAGAC 1 cut(s) 840
BstX2I RGATCY 3 cut(s) 1137, 1452, 1748
BstYI RGATCY 3 cut(s) 1137, 1452, 1748
BstZ17I GTATAC 1 cut(s) 2394
Bsu15I ATCGAT 1 cut(s) 2421
BsuI GTATCC 1 cut(s) 2211
BsuRI GGCC 7 cut(s) 30, 536, 1335, 1521, 1837, 2177, 2706
BsuTUI ATCGAT 1 cut(s) 2421
BtgI CCRYGG 3 cut(s) 904, 1567, 2797
BtgZI GCGATG 3 cut(s) 968, 1862, 2689
BtsCI GGATG 8 cut(s) 634, 675, 1330, 1563, 1585, 1896, 2038, 2353
BtsI GCAGTG 3 cut(s) 618, 757, 1657
BtsIMutI CAGTG 3 cut(s) 618, 757, 1657
BveI ACCTGC 4 cut(s) 67, 2151, 2705, 2849
Cac8I GCNNGC 3 cut(s) 895, 1546, 1550
CaiI CAGNNNCTG 2 cut(s) 764, 1205
CfoI GCGC 2 cut(s) 987, 2430
Cfr10I RCCGGY 1 cut(s) 119
Cfr13I GGNCC 6 cut(s) 28, 535, 1990, 2140, 2176, 2705
ClaI ATCGAT 1 cut(s) 2421
Csp6I GTAC 4 cut(s) 720, 1409, 1466, 2754
CspCI CAANNNNNGTGG 2 cut(s) 886, 921
CviQI GTAC 4 cut(s) 720, 1409, 1466, 2754
DdeI CTNAG 8 cut(s) 414, 840, 1032, 1100, 1291, 1527, 1815, 2818
DinI GGCGCC 1 cut(s) 986
DpnI GATC 8 cut(s) 180, 1139, 1454, 1750, 2244, 2517, 2721, 2851
DpnII GATC 8 cut(s) 178, 1137, 1452, 1748, 2242, 2515, 2719, 2849
EaeI YGGCCR 1 cut(s) 1835
Eam1104I CTCTTC 3 cut(s) 495, 1238, 2696
EarI CTCTTC 3 cut(s) 495, 1238, 2696
Ecl136II GAGCTC 1 cut(s) 1290
Eco130I CCWWGG 2 cut(s) 2797, 2865
Eco24I GRGCYC 3 cut(s) 600, 1292, 2810
Eco31I GGTCTC 1 cut(s) 2752
Eco32I GATATC 1 cut(s) 921
Eco47I GGWCC 2 cut(s) 1990, 2140
Eco53kI GAGCTC 1 cut(s) 1290
Eco57I CTGAAG 1 cut(s) 30
Eco72I CACGTG 1 cut(s) 1724
Eco88I CYCGRG 3 cut(s) 301, 599, 2021
EcoICRI GAGCTC 1 cut(s) 1290
EcoO109I RGGNCCY 1 cut(s) 28
EcoRI GAATTC 2 cut(s) 2233, 2610
EcoRII CCWGG 9 cut(s) 944, 1270, 1777, 1822, 1969, 2041, 2172, 2203, 2784
EcoRV GATATC 1 cut(s) 921
EcoT14I CCWWGG 2 cut(s) 2797, 2865
EcoT22I ATGCAT 3 cut(s) 1795, 1896, 2500
EcoT38I GRGCYC 3 cut(s) 600, 1292, 2810
EgeI GGCGCC 1 cut(s) 986
EheI GGCGCC 1 cut(s) 986
ErhI CCWWGG 2 cut(s) 2797, 2865
Esp3I CGTCTC 1 cut(s) 675
FaqI GGGAC 3 cut(s) 502, 2003, 2667
FauI CCCGC 1 cut(s) 1557
FauNDI CATATG 3 cut(s) 1920, 2005, 2443
FbaI TGATCA 2 cut(s) 2242, 2719
FblI GTMKAC 1 cut(s) 2393
Fnu4HI GCNGC 9 cut(s) 942, 1197, 1298, 1419, 1872, 1932, 2284, 2415, 2625
FokI GGATG 8 cut(s) 641, 682, 1337, 1550, 1572, 1903, 2025, 2360
FriOI GRGCYC 3 cut(s) 600, 1292, 2810
Fsp4HI GCNGC 9 cut(s) 942, 1197, 1298, 1419, 1872, 1932, 2284, 2415, 2625
FspBI CTAG 5 cut(s) 402, 795, 1362, 1461, 1905
GlaI GCGC 2 cut(s) 986, 2429
GluI GCNGC 9 cut(s) 942, 1197, 1298, 1419, 1872, 1932, 2284, 2415, 2625
GsaI CCCAGC 2 cut(s) 225, 627
GsuI CTGGAG 7 cut(s) 603, 744, 786, 950, 1293, 1806, 2156
HaeII RGCGCY 2 cut(s) 988, 2431
HaeIII GGCC 7 cut(s) 30, 536, 1335, 1521, 1837, 2177, 2706
HapII CCGG 5 cut(s) 120, 988, 1239, 1993, 2763
HhaI GCGC 2 cut(s) 987, 2430
Hin1I GRCGYC 1 cut(s) 985
Hin6I GCGC 2 cut(s) 985, 2428
HinP1I GCGC 2 cut(s) 985, 2428
HincII GTYRAC 2 cut(s) 1759, 2299
HindII GTYRAC 2 cut(s) 1759, 2299
HindIII AAGCTT 2 cut(s) 992, 1253
HpaI GTTAAC 1 cut(s) 1759
HpaII CCGG 5 cut(s) 120, 988, 1239, 1993, 2763
Hpy166II GTNNAC 8 cut(s) 785, 1411, 1466, 1727, 1759, 1765, 2299, 2394
Hpy8I GTNNAC 8 cut(s) 785, 1411, 1466, 1727, 1759, 1765, 2299, 2394
HpyAV CCTTC 6 cut(s) 344, 563, 801, 1038, 2273, 2578
HpyCH4III ACNGT 4 cut(s) 166, 905, 1408, 2313
HpyCH4IV ACGT 3 cut(s) 1723, 1761, 2257
HpyF3I CTNAG 8 cut(s) 414, 840, 1032, 1100, 1291, 1527, 1815, 2818
HpySE526I ACGT 3 cut(s) 1723, 1761, 2257
Hsp92I GRCGYC 1 cut(s) 985
HspAI GCGC 2 cut(s) 985, 2428
KasI GGCGCC 1 cut(s) 984
Ksp22I TGATCA 2 cut(s) 2242, 2719
KspAI GTTAAC 1 cut(s) 1759
Kzo9I GATC 8 cut(s) 178, 1137, 1452, 1748, 2242, 2515, 2719, 2849
LmnI GCTCC 5 cut(s) 1287, 1394, 1426, 1825, 2805
Lsp1109I GCAGC 9 cut(s) 953, 1183, 1284, 1430, 1883, 1943, 2295, 2401, 2611
LweI GCATC 7 cut(s) 146, 344, 1638, 1881, 2394, 2600, 2666
MaeI CTAG 5 cut(s) 402, 795, 1362, 1461, 1905
MaeII ACGT 3 cut(s) 1723, 1761, 2257
MaeIII GTNAC 5 cut(s) 129, 586, 1302, 1364, 1372
MalI GATC 8 cut(s) 180, 1139, 1454, 1750, 2244, 2517, 2721, 2851
MboI GATC 8 cut(s) 178, 1137, 1452, 1748, 2242, 2515, 2719, 2849
MfeI CAATTG 2 cut(s) 2463, 2595
MflI RGATCY 3 cut(s) 1137, 1452, 1748
MhlI GDGCHC 7 cut(s) 600, 774, 1055, 1292, 1719, 1912, 2810
MlsI TGGCCA 1 cut(s) 1837
MluNI TGGCCA 1 cut(s) 1837
Mly113I GGCGCC 1 cut(s) 985
MlyI GAGTC 9 cut(s) 293, 524, 830, 874, 1538, 1713, 2033, 2163, 2864
MmeI TCCRAC 2 cut(s) 624, 2070
Mox20I TGGCCA 1 cut(s) 1837
Mph1103I ATGCAT 3 cut(s) 1795, 1896, 2500
MroXI GAANNNNTTC 1 cut(s) 1439
MscI TGGCCA 1 cut(s) 1837
MslI CAYNNNNRTG 8 cut(s) 120, 777, 1058, 1722, 1788, 2124, 2160, 2507
Msp20I TGGCCA 1 cut(s) 1837
MspA1I CMGCKG 3 cut(s) 698, 1552, 1888
MspCI CTTAAG 1 cut(s) 259
MspI CCGG 5 cut(s) 120, 988, 1239, 1993, 2763
MunI CAATTG 2 cut(s) 2463, 2595
Mva1269I GAATGC 3 cut(s) 955, 2070, 2498
MvaI CCWGG 9 cut(s) 946, 1272, 1779, 1824, 1971, 2043, 2174, 2205, 2786
NarI GGCGCC 1 cut(s) 985
NciI CCSGG 2 cut(s) 1240, 2763
NcoI CCATGG 1 cut(s) 2797
NdeI CATATG 3 cut(s) 1920, 2005, 2443
NdeII GATC 8 cut(s) 178, 1137, 1452, 1748, 2242, 2515, 2719, 2849
NlaIV GGNNCC 8 cut(s) 986, 1821, 1991, 2223, 2707, 2727, 2807, 2863
NmuCI GTSAC 1 cut(s) 129
NsiI ATGCAT 3 cut(s) 1795, 1896, 2500
NspI RCATGY 4 cut(s) 106, 119, 1441, 2113
NspV TTCGAA 1 cut(s) 734
OliI CACNNNNGTG 2 cut(s) 1058, 1722
PaeR7I CTCGAG 1 cut(s) 599
PaqCI CACCTGC 1 cut(s) 2705
PciI ACATGT 2 cut(s) 1437, 2109
PctI GAATGC 3 cut(s) 955, 2070, 2498
PdmI GAANNNNTTC 1 cut(s) 1439
PfeI GAWTC 5 cut(s) 1012, 1076, 1202, 1499, 2015
Pfl23II CGTACG 1 cut(s) 2753
PfoI TCCNGGA 4 cut(s) 1270, 1777, 1822, 2203
PkrI GCNGC 9 cut(s) 943, 1198, 1299, 1420, 1873, 1933, 2285, 2416, 2626
PleI GAGTC 9 cut(s) 293, 523, 830, 874, 1537, 1712, 2032, 2163, 2864
PluTI GGCGCC 1 cut(s) 988
PmaCI CACGTG 1 cut(s) 1724
PmlI CACGTG 1 cut(s) 1724
PpsI GAGTC 9 cut(s) 293, 523, 830, 874, 1537, 1712, 2032, 2163, 2864
Ppu21I YACGTR 1 cut(s) 1724
PscI ACATGT 2 cut(s) 1437, 2109
PshAI GACNNNNGTC 2 cut(s) 442, 687
Psp124BI GAGCTC 1 cut(s) 1292
Psp6I CCWGG 9 cut(s) 944, 1270, 1777, 1822, 1969, 2041, 2172, 2203, 2784
PspCI CACGTG 1 cut(s) 1724
PspFI CCCAGC 2 cut(s) 221, 623
PspGI CCWGG 9 cut(s) 944, 1270, 1777, 1822, 1969, 2041, 2172, 2203, 2784
PspLI CGTACG 1 cut(s) 2753
PspN4I GGNNCC 8 cut(s) 986, 1821, 1991, 2223, 2707, 2727, 2807, 2863
PspPI GGNCC 6 cut(s) 28, 535, 1990, 2140, 2176, 2705
PspXI VCTCGAGB 1 cut(s) 599
PstI CTGCAG 4 cut(s) 1201, 1302, 1420, 2860
PstNI CAGNNNCTG 2 cut(s) 764, 1205
PsuI RGATCY 3 cut(s) 1137, 1452, 1748
PvuII CAGCTG 1 cut(s) 698
RsaI GTAC 4 cut(s) 721, 1410, 1467, 2755
RsaNI GTAC 4 cut(s) 720, 1409, 1466, 2754
RseI CAYNNNNRTG 8 cut(s) 120, 777, 1058, 1722, 1788, 2124, 2160, 2507
SacI GAGCTC 1 cut(s) 1292
SatI GCNGC 9 cut(s) 942, 1197, 1298, 1419, 1872, 1932, 2284, 2415, 2625
Sau3AI GATC 8 cut(s) 178, 1137, 1452, 1748, 2242, 2515, 2719, 2849
Sau96I GGNCC 6 cut(s) 28, 535, 1990, 2140, 2176, 2705
SchI GAGTC 9 cut(s) 293, 524, 830, 874, 1538, 1713, 2033, 2163, 2864
SduI GDGCHC 7 cut(s) 600, 774, 1055, 1292, 1719, 1912, 2810
SfaNI GCATC 7 cut(s) 146, 344, 1638, 1881, 2394, 2600, 2666
SfcI CTRYAG 4 cut(s) 1197, 1298, 1416, 2856
SfoI GGCGCC 1 cut(s) 986
Sfr274I CTCGAG 1 cut(s) 599
SfuI TTCGAA 1 cut(s) 734
SinI GGWCC 2 cut(s) 1990, 2140
SlaI CTCGAG 1 cut(s) 599
SmiMI CAYNNNNRTG 8 cut(s) 120, 777, 1058, 1722, 1788, 2124, 2160, 2507
SmlI CTYRAG 7 cut(s) 149, 259, 599, 1256, 1308, 1708, 2650
SmoI CTYRAG 7 cut(s) 149, 259, 599, 1256, 1308, 1708, 2650
SsiI CCGC 4 cut(s) 347, 1550, 1888, 2332
SspDI GGCGCC 1 cut(s) 984
SspI AATATT 1 cut(s) 2380
SspMI CTAG 5 cut(s) 402, 795, 1362, 1461, 1905
SstI GAGCTC 1 cut(s) 1292
StyI CCWWGG 2 cut(s) 2797, 2865
TaaI ACNGT 4 cut(s) 166, 905, 1408, 2313
TaiI ACGT 3 cut(s) 1726, 1764, 2260
TaqI TCGA 7 cut(s) 600, 734, 1010, 1176, 2421, 2608, 2773
TatI WGTACW 2 cut(s) 719, 1408
TfiI GAWTC 5 cut(s) 1012, 1076, 1202, 1499, 2015
TscAI CASTG 3 cut(s) 625, 757, 1657
TseFI GTSAC 1 cut(s) 129
TseI GCWGC 9 cut(s) 941, 1196, 1297, 1418, 1871, 1931, 2283, 2414, 2624
Tsp45I GTSAC 1 cut(s) 129
TspGWI ACGGA 2 cut(s) 882, 1130
TspRI CASTG 3 cut(s) 625, 757, 1657
Vha464I CTTAAG 1 cut(s) 259
VpaK11BI GGWCC 2 cut(s) 1990, 2140
XapI RAATTY 7 cut(s) 274, 1178, 1556, 1863, 2093, 2233, 2610
XceI RCATGY 4 cut(s) 106, 119, 1441, 2113
XcmI CCANNNNNNNNNTGG 1 cut(s) 1830
XhoI CTCGAG 1 cut(s) 599
XmiI GTMKAC 1 cut(s) 2393
XmnI GAANNNNTTC 1 cut(s) 1439
XspI CTAG 5 cut(s) 402, 795, 1362, 1461, 1905
Zsp2I ATGCAT 3 cut(s) 1795, 1896, 2500
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.