Protein MEI2-like 4 isoform X1
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RRM_1 | PF00076 | 299 - 363 | 1.7e-09 | RNA recognition motif |
| RRM_5 | PF13893 | 381 - 457 | 1.4e-06 | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) |
| RRM_1 | PF00076 | 384 - 449 | 3.4e-10 | RNA recognition motif |
| RRM_2 | PF04059 | 817 - 913 | 8.6e-54 | RNA recognition motif 2 |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 2798 |
| Acc36I | ACCTGC | 5 cut(s) | 160, 2244, 2559, 2798, 2942 |
| AccB1I | GGYRCC | 2 cut(s) | 1077, 2818 |
| AccI | GTMKAC | 1 cut(s) | 2486 |
| AciI | CCGC | 4 cut(s) | 440, 1643, 1981, 2425 |
| AclWI | GGATC | 7 cut(s) | 49, 279, 1225, 1553, 1849, 2603, 2950 |
| AcoI | YGGCCR | 1 cut(s) | 1928 |
| AcsI | RAATTY | 7 cut(s) | 367, 1271, 1649, 1956, 2186, 2326, 2703 |
| AcuI | CTGAAG | 1 cut(s) | 123 |
| AcvI | CACGTG | 1 cut(s) | 1817 |
| AcyI | GRCGYC | 1 cut(s) | 1078 |
| AfaI | GTAC | 3 cut(s) | 1503, 1560, 2848 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 394, 1317, 1338, 1871, 1980, 2080, 2807, 2912 |
| AflII | CTTAAG | 1 cut(s) | 352 |
| AflIII | ACRYGT | 3 cut(s) | 58, 1530, 2202 |
| AgsI | TTSAA | 9 cut(s) | 322, 367, 617, 926, 1592, 1737, 2644, 2708, 2788 |
| AjiI | CACGTC | 1 cut(s) | 61 |
| AleI | CACNNNNGTG | 2 cut(s) | 1151, 1815 |
| Alw21I | GWGCWC | 3 cut(s) | 867, 1385, 2005 |
| AlwI | GGATC | 7 cut(s) | 49, 279, 1225, 1553, 1849, 2603, 2950 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 857, 1298 |
| Ama87I | CYCGRG | 4 cut(s) | 394, 493, 692, 2114 |
| AoxI | GGCC | 8 cut(s) | 24, 121, 627, 1426, 1612, 1928, 2268, 2797 |
| ApeKI | GCWGC | 9 cut(s) | 1034, 1289, 1390, 1511, 1964, 2024, 2376, 2507, 2717 |
| ApoI | RAATTY | 7 cut(s) | 367, 1271, 1649, 1956, 2186, 2326, 2703 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1532 |
| AspLEI | GCGC | 2 cut(s) | 1080, 2523 |
| AspS9I | GGNCC | 6 cut(s) | 121, 628, 2083, 2233, 2269, 2798 |
| AsuC2I | CCSGG | 1 cut(s) | 1333 |
| AsuII | TTCGAA | 1 cut(s) | 827 |
| AvaI | CYCGRG | 4 cut(s) | 394, 493, 692, 2114 |
| AvaII | GGWCC | 2 cut(s) | 2083, 2233 |
| BaeGI | GKGCMC | 2 cut(s) | 1148, 1812 |
| BalI | TGGCCA | 1 cut(s) | 1930 |
| BanI | GGYRCC | 2 cut(s) | 1077, 2818 |
| BanII | GRGCYC | 3 cut(s) | 693, 1385, 2903 |
| BbrPI | CACGTG | 1 cut(s) | 1817 |
| BbsI | GAAGAC | 1 cut(s) | 933 |
| Bbv12I | GWGCWC | 3 cut(s) | 867, 1385, 2005 |
| BbvI | GCAGC | 9 cut(s) | 1046, 1276, 1377, 1523, 1976, 2036, 2388, 2494, 2704 |
| BceAI | ACGGC | 4 cut(s) | 11, 365, 1678, 2757 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 817, 851 |
| BciVI | GTATCC | 1 cut(s) | 2304 |
| BclI | TGATCA | 3 cut(s) | 1581, 2335, 2812 |
| BcnI | CCSGG | 1 cut(s) | 1333 |
| BfaI | CTAG | 4 cut(s) | 888, 1455, 1554, 1998 |
| BfmI | CTRYAG | 5 cut(s) | 20, 1290, 1391, 1509, 2949 |
| BfoI | RGCGCY | 2 cut(s) | 1081, 2524 |
| BfrI | CTTAAG | 1 cut(s) | 352 |
| BfuAI | ACCTGC | 5 cut(s) | 160, 2244, 2559, 2798, 2942 |
| BfuI | GTATCC | 1 cut(s) | 2304 |
| BisI | GCNGC | 9 cut(s) | 1035, 1290, 1391, 1512, 1965, 2025, 2377, 2508, 2718 |
| BlsI | GCNGC | 9 cut(s) | 1036, 1291, 1392, 1513, 1966, 2026, 2378, 2509, 2719 |
| Bme18I | GGWCC | 2 cut(s) | 2083, 2233 |
| BmeT110I | CYCGRG | 4 cut(s) | 394, 493, 692, 2114 |
| BmgBI | CACGTC | 1 cut(s) | 61 |
| BmgT120I | GGNCC | 6 cut(s) | 121, 628, 2083, 2233, 2269, 2798 |
| BmiI | GGNNCC | 8 cut(s) | 1079, 1914, 2084, 2316, 2800, 2820, 2900, 2956 |
| BmsI | GCATC | 6 cut(s) | 239, 1731, 1974, 2487, 2693, 2759 |
| BoxI | GACNNNNGTC | 3 cut(s) | 59, 535, 780 |
| BpiI | GAAGAC | 1 cut(s) | 933 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1435, 1467 |
| BpmI | CTGGAG | 7 cut(s) | 696, 837, 879, 1043, 1386, 1899, 2249 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1384 |
| Bpu14I | TTCGAA | 1 cut(s) | 827 |
| BpuEI | CTTGAG | 5 cut(s) | 263, 1370, 1386, 1786, 2728 |
| BpuMI | CCSGG | 1 cut(s) | 1333 |
| Bsa29I | ATCGAT | 1 cut(s) | 2514 |
| BsaAI | YACGTR | 1 cut(s) | 1817 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1137 |
| BsaHI | GRCGYC | 1 cut(s) | 1078 |
| BsaI | GGTCTC | 1 cut(s) | 2845 |
| BsaJI | CCNNGG | 6 cut(s) | 997, 1660, 2063, 2877, 2890, 2958 |
| BsaWI | WCCGGW | 1 cut(s) | 2085 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 394, 1317, 1338, 1871, 1980, 2080, 2807, 2912 |
| Bse118I | RCCGGY | 1 cut(s) | 212 |
| Bse1I | ACTGG | 1 cut(s) | 1474 |
| Bse3DI | GCAATG | 3 cut(s) | 845, 2034, 2584 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1137 |
| BseCI | ATCGAT | 1 cut(s) | 2514 |
| BseDI | CCNNGG | 6 cut(s) | 997, 1660, 2063, 2877, 2890, 2958 |
| BseGI | GGATG | 9 cut(s) | 727, 768, 1423, 1656, 1678, 1969, 1989, 2131, 2446 |
| BseJI | GATNNNNATC | 1 cut(s) | 1137 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 394, 1317, 1338, 1871, 1980, 2080, 2807, 2912 |
| BseMI | GCAATG | 3 cut(s) | 845, 2034, 2584 |
| BseMII | CTCAG | 7 cut(s) | 498, 924, 1116, 1398, 1611, 1922, 2925 |
| BseNI | ACTGG | 1 cut(s) | 1474 |
| BseRI | GAGGAG | 3 cut(s) | 746, 834, 2897 |
| BseSI | GKGCMC | 2 cut(s) | 1148, 1812 |
| BseXI | GCAGC | 9 cut(s) | 1046, 1276, 1377, 1523, 1976, 2036, 2388, 2494, 2704 |
| BseYI | CCCAGC | 2 cut(s) | 314, 716 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2514 |
| BshFI | GGCC | 8 cut(s) | 26, 123, 629, 1428, 1614, 1930, 2270, 2799 |
| BshNI | GGYRCC | 2 cut(s) | 1077, 2818 |
| BshVI | ATCGAT | 1 cut(s) | 2514 |
| BsiEI | CGRYCG | 1 cut(s) | 2514 |
| BsiHKAI | GWGCWC | 3 cut(s) | 867, 1385, 2005 |
| BsiHKCI | CYCGRG | 4 cut(s) | 394, 493, 692, 2114 |
| BsiSI | CCGG | 4 cut(s) | 213, 1081, 1332, 2086 |
| BsiWI | CGTACG | 1 cut(s) | 2846 |
| BslFI | GGGAC | 3 cut(s) | 595, 2096, 2760 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 394, 1317, 1338, 1871, 1980, 2080, 2807, 2912 |
| BsmBI | CGTCTC | 1 cut(s) | 768 |
| BsmFI | GGGAC | 3 cut(s) | 595, 2096, 2760 |
| BsmI | GAATGC | 3 cut(s) | 1048, 2163, 2591 |
| BsnI | GGCC | 8 cut(s) | 26, 123, 629, 1428, 1614, 1930, 2270, 2799 |
| Bso31I | GGTCTC | 1 cut(s) | 2845 |
| BsoBI | CYCGRG | 4 cut(s) | 394, 493, 692, 2114 |
| Bsp119I | TTCGAA | 1 cut(s) | 827 |
| Bsp1286I | GDGCHC | 7 cut(s) | 693, 867, 1148, 1385, 1812, 2005, 2903 |
| Bsp1407I | TGTACA | 1 cut(s) | 1501 |
| Bsp19I | CCATGG | 1 cut(s) | 2890 |
| BspACI | CCGC | 4 cut(s) | 440, 1643, 1981, 2425 |
| BspANI | GGCC | 8 cut(s) | 26, 123, 629, 1428, 1614, 1930, 2270, 2799 |
| BspCNI | CTCAG | 7 cut(s) | 499, 925, 1117, 1397, 1612, 1921, 2924 |
| BspDI | ATCGAT | 1 cut(s) | 2514 |
| BspLI | GGNNCC | 8 cut(s) | 1079, 1914, 2084, 2316, 2800, 2820, 2900, 2956 |
| BspMAI | CTGCAG | 4 cut(s) | 1294, 1395, 1513, 2953 |
| BspMI | ACCTGC | 5 cut(s) | 160, 2244, 2559, 2798, 2942 |
| BspPI | GGATC | 7 cut(s) | 49, 279, 1225, 1553, 1849, 2603, 2950 |
| BspT104I | TTCGAA | 1 cut(s) | 827 |
| BspT107I | GGYRCC | 2 cut(s) | 1077, 2818 |
| BspTI | CTTAAG | 1 cut(s) | 352 |
| BspTNI | GGTCTC | 1 cut(s) | 2845 |
| BsrDI | GCAATG | 3 cut(s) | 845, 2034, 2584 |
| BsrFI | RCCGGY | 1 cut(s) | 212 |
| BsrGI | TGTACA | 1 cut(s) | 1501 |
| BsrI | ACTGG | 1 cut(s) | 1474 |
| BssAI | RCCGGY | 1 cut(s) | 212 |
| BssECI | CCNNGG | 6 cut(s) | 997, 1660, 2063, 2877, 2890, 2958 |
| BssNAI | GTATAC | 1 cut(s) | 2487 |
| BssNI | GRCGYC | 1 cut(s) | 1078 |
| BssT1I | CCWWGG | 2 cut(s) | 2890, 2958 |
| Bst1107I | GTATAC | 1 cut(s) | 2487 |
| Bst4CI | ACNGT | 4 cut(s) | 259, 998, 1501, 2406 |
| Bst6I | CTCTTC | 3 cut(s) | 588, 1331, 2789 |
| BstACI | GRCGYC | 1 cut(s) | 1078 |
| BstAFI | CTTAAG | 1 cut(s) | 352 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 1298, 1728, 2690 |
| BstAUI | TGTACA | 1 cut(s) | 1501 |
| BstBAI | YACGTR | 1 cut(s) | 1817 |
| BstBI | TTCGAA | 1 cut(s) | 827 |
| BstC8I | GCNNGC | 3 cut(s) | 988, 1639, 1643 |
| BstDEI | CTNAG | 8 cut(s) | 507, 933, 1125, 1193, 1384, 1620, 1908, 2911 |
| BstDSI | CCRYGG | 3 cut(s) | 997, 1660, 2890 |
| BstF5I | GGATG | 9 cut(s) | 727, 768, 1423, 1656, 1678, 1969, 1989, 2131, 2446 |
| BstH2I | RGCGCY | 2 cut(s) | 1081, 2524 |
| BstHHI | GCGC | 2 cut(s) | 1080, 2523 |
| BstMCI | CGRYCG | 1 cut(s) | 2514 |
| BstNSI | RCATGY | 4 cut(s) | 199, 212, 1534, 2206 |
| BstPAI | GACNNNNGTC | 3 cut(s) | 59, 535, 780 |
| BstSFI | CTRYAG | 5 cut(s) | 20, 1290, 1391, 1509, 2949 |
| BstSLI | GKGCMC | 2 cut(s) | 1148, 1812 |
| BstV1I | GCAGC | 9 cut(s) | 1046, 1276, 1377, 1523, 1976, 2036, 2388, 2494, 2704 |
| BstV2I | GAAGAC | 1 cut(s) | 933 |
| BstX2I | RGATCY | 3 cut(s) | 1230, 1545, 1841 |
| BstYI | RGATCY | 3 cut(s) | 1230, 1545, 1841 |
| BstZ17I | GTATAC | 1 cut(s) | 2487 |
| Bsu15I | ATCGAT | 1 cut(s) | 2514 |
| BsuI | GTATCC | 1 cut(s) | 2304 |
| BsuRI | GGCC | 8 cut(s) | 26, 123, 629, 1428, 1614, 1930, 2270, 2799 |
| BsuTUI | ATCGAT | 1 cut(s) | 2514 |
| BtgI | CCRYGG | 3 cut(s) | 997, 1660, 2890 |
| BtgZI | GCGATG | 2 cut(s) | 1061, 2782 |
| BtrI | CACGTC | 1 cut(s) | 61 |
| BtsCI | GGATG | 9 cut(s) | 727, 768, 1423, 1656, 1678, 1969, 1989, 2131, 2446 |
| BtsI | GCAGTG | 3 cut(s) | 711, 850, 1750 |
| BtsIMutI | CAGTG | 3 cut(s) | 711, 850, 1750 |
| BveI | ACCTGC | 5 cut(s) | 160, 2244, 2559, 2798, 2942 |
| Cac8I | GCNNGC | 3 cut(s) | 988, 1639, 1643 |
| CaiI | CAGNNNCTG | 2 cut(s) | 857, 1298 |
| CfoI | GCGC | 2 cut(s) | 1080, 2523 |
| Cfr10I | RCCGGY | 1 cut(s) | 212 |
| Cfr13I | GGNCC | 6 cut(s) | 121, 628, 2083, 2233, 2269, 2798 |
| ClaI | ATCGAT | 1 cut(s) | 2514 |
| Csp6I | GTAC | 3 cut(s) | 1502, 1559, 2847 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 979, 1014 |
| CviQI | GTAC | 3 cut(s) | 1502, 1559, 2847 |
| DdeI | CTNAG | 8 cut(s) | 507, 933, 1125, 1193, 1384, 1620, 1908, 2911 |
| DinI | GGCGCC | 1 cut(s) | 1079 |
| EaeI | YGGCCR | 1 cut(s) | 1928 |
| Eam1104I | CTCTTC | 3 cut(s) | 588, 1331, 2789 |
| EarI | CTCTTC | 3 cut(s) | 588, 1331, 2789 |
| Ecl136II | GAGCTC | 1 cut(s) | 1383 |
| Eco130I | CCWWGG | 2 cut(s) | 2890, 2958 |
| Eco24I | GRGCYC | 3 cut(s) | 693, 1385, 2903 |
| Eco31I | GGTCTC | 1 cut(s) | 2845 |
| Eco32I | GATATC | 1 cut(s) | 1014 |
| Eco47I | GGWCC | 2 cut(s) | 2083, 2233 |
| Eco53kI | GAGCTC | 1 cut(s) | 1383 |
| Eco57I | CTGAAG | 1 cut(s) | 123 |
| Eco72I | CACGTG | 1 cut(s) | 1817 |
| Eco88I | CYCGRG | 4 cut(s) | 394, 493, 692, 2114 |
| EcoICRI | GAGCTC | 1 cut(s) | 1383 |
| EcoO109I | RGGNCCY | 1 cut(s) | 121 |
| EcoRI | GAATTC | 2 cut(s) | 2326, 2703 |
| EcoRV | GATATC | 1 cut(s) | 1014 |
| EcoT14I | CCWWGG | 2 cut(s) | 2890, 2958 |
| EcoT22I | ATGCAT | 3 cut(s) | 1888, 1989, 2593 |
| EcoT38I | GRGCYC | 3 cut(s) | 693, 1385, 2903 |
| EgeI | GGCGCC | 1 cut(s) | 1079 |
| EheI | GGCGCC | 1 cut(s) | 1079 |
| ErhI | CCWWGG | 2 cut(s) | 2890, 2958 |
| Esp3I | CGTCTC | 1 cut(s) | 768 |
| FaqI | GGGAC | 3 cut(s) | 595, 2096, 2760 |
| FauI | CCCGC | 1 cut(s) | 1650 |
| FauNDI | CATATG | 3 cut(s) | 2013, 2098, 2536 |
| FbaI | TGATCA | 3 cut(s) | 1581, 2335, 2812 |
| FblI | GTMKAC | 1 cut(s) | 2486 |
| Fnu4HI | GCNGC | 9 cut(s) | 1035, 1290, 1391, 1512, 1965, 2025, 2377, 2508, 2718 |
| FokI | GGATG | 9 cut(s) | 734, 775, 1430, 1643, 1665, 1956, 1996, 2118, 2453 |
| FriOI | GRGCYC | 3 cut(s) | 693, 1385, 2903 |
| Fsp4HI | GCNGC | 9 cut(s) | 1035, 1290, 1391, 1512, 1965, 2025, 2377, 2508, 2718 |
| FspBI | CTAG | 4 cut(s) | 888, 1455, 1554, 1998 |
| GlaI | GCGC | 2 cut(s) | 1079, 2522 |
| GluI | GCNGC | 9 cut(s) | 1035, 1290, 1391, 1512, 1965, 2025, 2377, 2508, 2718 |
| GsaI | CCCAGC | 2 cut(s) | 318, 720 |
| GsuI | CTGGAG | 7 cut(s) | 696, 837, 879, 1043, 1386, 1899, 2249 |
| HaeII | RGCGCY | 2 cut(s) | 1081, 2524 |
| HaeIII | GGCC | 8 cut(s) | 26, 123, 629, 1428, 1614, 1930, 2270, 2799 |
| HapII | CCGG | 4 cut(s) | 213, 1081, 1332, 2086 |
| HhaI | GCGC | 2 cut(s) | 1080, 2523 |
| Hin1I | GRCGYC | 1 cut(s) | 1078 |
| Hin6I | GCGC | 2 cut(s) | 1078, 2521 |
| HinP1I | GCGC | 2 cut(s) | 1078, 2521 |
| HincII | GTYRAC | 1 cut(s) | 2392 |
| HindII | GTYRAC | 1 cut(s) | 2392 |
| HindIII | AAGCTT | 2 cut(s) | 1085, 1346 |
| HpaII | CCGG | 4 cut(s) | 213, 1081, 1332, 2086 |
| Hpy166II | GTNNAC | 7 cut(s) | 878, 1504, 1559, 1820, 1858, 2392, 2487 |
| Hpy8I | GTNNAC | 7 cut(s) | 878, 1504, 1559, 1820, 1858, 2392, 2487 |
| HpyAV | CCTTC | 6 cut(s) | 437, 656, 894, 1131, 2366, 2671 |
| HpyCH4III | ACNGT | 4 cut(s) | 259, 998, 1501, 2406 |
| HpyCH4IV | ACGT | 4 cut(s) | 60, 1816, 1854, 2350 |
| HpyF3I | CTNAG | 8 cut(s) | 507, 933, 1125, 1193, 1384, 1620, 1908, 2911 |
| HpySE526I | ACGT | 4 cut(s) | 60, 1816, 1854, 2350 |
| Hsp92I | GRCGYC | 1 cut(s) | 1078 |
| HspAI | GCGC | 2 cut(s) | 1078, 2521 |
| KasI | GGCGCC | 1 cut(s) | 1077 |
| Ksp22I | TGATCA | 3 cut(s) | 1581, 2335, 2812 |
| LmnI | GCTCC | 5 cut(s) | 1380, 1487, 1519, 1918, 2898 |
| Lsp1109I | GCAGC | 9 cut(s) | 1046, 1276, 1377, 1523, 1976, 2036, 2388, 2494, 2704 |
| LweI | GCATC | 6 cut(s) | 239, 1731, 1974, 2487, 2693, 2759 |
| MaeI | CTAG | 4 cut(s) | 888, 1455, 1554, 1998 |
| MaeII | ACGT | 4 cut(s) | 60, 1816, 1854, 2350 |
| MaeIII | GTNAC | 6 cut(s) | 222, 679, 1395, 1457, 1465, 1850 |
| MfeI | CAATTG | 2 cut(s) | 2556, 2688 |
| MflI | RGATCY | 3 cut(s) | 1230, 1545, 1841 |
| MhlI | GDGCHC | 7 cut(s) | 693, 867, 1148, 1385, 1812, 2005, 2903 |
| MlsI | TGGCCA | 1 cut(s) | 1930 |
| MluNI | TGGCCA | 1 cut(s) | 1930 |
| Mly113I | GGCGCC | 1 cut(s) | 1078 |
| MlyI | GAGTC | 9 cut(s) | 386, 617, 923, 967, 1631, 1806, 2126, 2256, 2957 |
| MmeI | TCCRAC | 2 cut(s) | 717, 2163 |
| Mox20I | TGGCCA | 1 cut(s) | 1930 |
| Mph1103I | ATGCAT | 3 cut(s) | 1888, 1989, 2593 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1532 |
| MscI | TGGCCA | 1 cut(s) | 1930 |
| MslI | CAYNNNNRTG | 8 cut(s) | 213, 870, 1151, 1815, 1881, 2217, 2253, 2600 |
| Msp20I | TGGCCA | 1 cut(s) | 1930 |
| MspA1I | CMGCKG | 3 cut(s) | 791, 1645, 1981 |
| MspCI | CTTAAG | 1 cut(s) | 352 |
| MspI | CCGG | 4 cut(s) | 213, 1081, 1332, 2086 |
| MunI | CAATTG | 2 cut(s) | 2556, 2688 |
| Mva1269I | GAATGC | 3 cut(s) | 1048, 2163, 2591 |
| NarI | GGCGCC | 1 cut(s) | 1078 |
| NciI | CCSGG | 1 cut(s) | 1333 |
| NcoI | CCATGG | 1 cut(s) | 2890 |
| NdeI | CATATG | 3 cut(s) | 2013, 2098, 2536 |
| NlaIV | GGNNCC | 8 cut(s) | 1079, 1914, 2084, 2316, 2800, 2820, 2900, 2956 |
| NmuCI | GTSAC | 1 cut(s) | 222 |
| NsiI | ATGCAT | 3 cut(s) | 1888, 1989, 2593 |
| NspI | RCATGY | 4 cut(s) | 199, 212, 1534, 2206 |
| NspV | TTCGAA | 1 cut(s) | 827 |
| OliI | CACNNNNGTG | 2 cut(s) | 1151, 1815 |
| PaeR7I | CTCGAG | 2 cut(s) | 493, 692 |
| PaqCI | CACCTGC | 1 cut(s) | 2798 |
| PciI | ACATGT | 2 cut(s) | 1530, 2202 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 72 |
| PctI | GAATGC | 3 cut(s) | 1048, 2163, 2591 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1532 |
| PfeI | GAWTC | 5 cut(s) | 1105, 1169, 1295, 1592, 2108 |
| Pfl23II | CGTACG | 1 cut(s) | 2846 |
| PfoI | TCCNGGA | 5 cut(s) | 814, 1363, 1870, 1915, 2296 |
| PkrI | GCNGC | 9 cut(s) | 1036, 1291, 1392, 1513, 1966, 2026, 2378, 2509, 2719 |
| Ple19I | CGATCG | 1 cut(s) | 2514 |
| PleI | GAGTC | 9 cut(s) | 386, 616, 923, 967, 1630, 1805, 2125, 2256, 2957 |
| PluTI | GGCGCC | 1 cut(s) | 1081 |
| PmaCI | CACGTG | 1 cut(s) | 1817 |
| PmlI | CACGTG | 1 cut(s) | 1817 |
| PpsI | GAGTC | 9 cut(s) | 386, 616, 923, 967, 1630, 1805, 2125, 2256, 2957 |
| Ppu21I | YACGTR | 1 cut(s) | 1817 |
| PscI | ACATGT | 2 cut(s) | 1530, 2202 |
| PshAI | GACNNNNGTC | 3 cut(s) | 59, 535, 780 |
| Psp124BI | GAGCTC | 1 cut(s) | 1385 |
| PspCI | CACGTG | 1 cut(s) | 1817 |
| PspFI | CCCAGC | 2 cut(s) | 314, 716 |
| PspLI | CGTACG | 1 cut(s) | 2846 |
| PspN4I | GGNNCC | 8 cut(s) | 1079, 1914, 2084, 2316, 2800, 2820, 2900, 2956 |
| PspPI | GGNCC | 6 cut(s) | 121, 628, 2083, 2233, 2269, 2798 |
| PspXI | VCTCGAGB | 1 cut(s) | 692 |
| PstI | CTGCAG | 4 cut(s) | 1294, 1395, 1513, 2953 |
| PstNI | CAGNNNCTG | 2 cut(s) | 857, 1298 |
| PsuI | RGATCY | 3 cut(s) | 1230, 1545, 1841 |
| PvuI | CGATCG | 1 cut(s) | 2514 |
| PvuII | CAGCTG | 1 cut(s) | 791 |
| RsaI | GTAC | 3 cut(s) | 1503, 1560, 2848 |
| RsaNI | GTAC | 3 cut(s) | 1502, 1559, 2847 |
| RseI | CAYNNNNRTG | 8 cut(s) | 213, 870, 1151, 1815, 1881, 2217, 2253, 2600 |
| SacI | GAGCTC | 1 cut(s) | 1385 |
| SatI | GCNGC | 9 cut(s) | 1035, 1290, 1391, 1512, 1965, 2025, 2377, 2508, 2718 |
| Sau96I | GGNCC | 6 cut(s) | 121, 628, 2083, 2233, 2269, 2798 |
| SchI | GAGTC | 9 cut(s) | 386, 617, 923, 967, 1631, 1806, 2126, 2256, 2957 |
| SduI | GDGCHC | 7 cut(s) | 693, 867, 1148, 1385, 1812, 2005, 2903 |
| SfaNI | GCATC | 6 cut(s) | 239, 1731, 1974, 2487, 2693, 2759 |
| SfcI | CTRYAG | 5 cut(s) | 20, 1290, 1391, 1509, 2949 |
| SfoI | GGCGCC | 1 cut(s) | 1079 |
| Sfr274I | CTCGAG | 2 cut(s) | 493, 692 |
| SfuI | TTCGAA | 1 cut(s) | 827 |
| SinI | GGWCC | 2 cut(s) | 2083, 2233 |
| SlaI | CTCGAG | 2 cut(s) | 493, 692 |
| SmiMI | CAYNNNNRTG | 8 cut(s) | 213, 870, 1151, 1815, 1881, 2217, 2253, 2600 |
| SmlI | CTYRAG | 8 cut(s) | 242, 352, 493, 692, 1349, 1401, 1801, 2743 |
| SmoI | CTYRAG | 8 cut(s) | 242, 352, 493, 692, 1349, 1401, 1801, 2743 |
| SsiI | CCGC | 4 cut(s) | 440, 1643, 1981, 2425 |
| SspDI | GGCGCC | 1 cut(s) | 1077 |
| SspI | AATATT | 1 cut(s) | 2473 |
| SspMI | CTAG | 4 cut(s) | 888, 1455, 1554, 1998 |
| SstI | GAGCTC | 1 cut(s) | 1385 |
| StyI | CCWWGG | 2 cut(s) | 2890, 2958 |
| TaaI | ACNGT | 4 cut(s) | 259, 998, 1501, 2406 |
| TaiI | ACGT | 4 cut(s) | 63, 1819, 1857, 2353 |
| TatI | WGTACW | 1 cut(s) | 1501 |
| TfiI | GAWTC | 5 cut(s) | 1105, 1169, 1295, 1592, 2108 |
| TscAI | CASTG | 3 cut(s) | 718, 850, 1750 |
| TseFI | GTSAC | 1 cut(s) | 222 |
| TseI | GCWGC | 9 cut(s) | 1034, 1289, 1390, 1511, 1964, 2024, 2376, 2507, 2717 |
| Tsp45I | GTSAC | 1 cut(s) | 222 |
| TspGWI | ACGGA | 2 cut(s) | 975, 1223 |
| TspRI | CASTG | 3 cut(s) | 718, 850, 1750 |
| Vha464I | CTTAAG | 1 cut(s) | 352 |
| VpaK11BI | GGWCC | 2 cut(s) | 2083, 2233 |
| XapI | RAATTY | 7 cut(s) | 367, 1271, 1649, 1956, 2186, 2326, 2703 |
| XceI | RCATGY | 4 cut(s) | 199, 212, 1534, 2206 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1923 |
| XhoI | CTCGAG | 2 cut(s) | 493, 692 |
| XmiI | GTMKAC | 1 cut(s) | 2486 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1532 |
| XspI | CTAG | 4 cut(s) | 888, 1455, 1554, 1998 |
| Zsp2I | ATGCAT | 3 cut(s) | 1888, 1989, 2593 |