Rroxscaffold_5G00370590

Protein MEI2-like 4 isoform X1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0001846
Physical Location & Seq
Reverse (-)
52270095 .. 52277839
7745 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00370590.1

Sequence Viewer

Length: 2097 bp
ATGCCATCTGAAGTAATGGACATTAAGGGCCTGTCATCTTCTTCTTTCTTCTCCGAAGATTTCCCAAACGAGAGGCAGGTTGGGTTTTGGAAATCAGATAACATGCCTGATAAACATGCCGGTGAGAAGTCACTTGCATCATCATCTCTTGAGAAGTGTCAGACGGTAAAATCTCTGGATCACCCTGATTTTTTCTTAATGCCAGAACAAAAGGTGAAACCCAGCTTCAATAGACAAGCAGTTGGGGCAGAGAGAGCCTTAAGTCATTCATTGAATTTATCGAGAGCCGTGAGCCTTGACTCGGGAGTAATATCTAATGTAAATGTTGAGACAGCATCTTACTATGCGGAAGGTGGCAAAGTCAATATGATGGGAACACAGTATGAGAGTAGCCTTTTCTCGAGTTCATTATCTGAGTTGTTTAGTAGGAAGTTGAGACTATCGTCAAACAATACACAATATGGACACTCTGTTGATAGTGTTGCCTCAAACTATGAGGAAGAGGAAGTTTTCGAGTCCCTTGAAGAAATGGAGGCCCAAACCATCGGAAACCTTCTCCCTGATGACGATGAGTTGCTTTCTGGAGTTACCGATGGGCTCGAGTATAATGTTCCACTCACTGCTGGGGATGATATTGAGGAGTTGGATTTTTTTAGCAGTAGTGGAGGGATGGATTTGGGAGACGATGGTTTGTCAGCTGGACTAAACAATTCTGATTGTCCTGGAGGAGTTTCGAATGGTCTGCAATGCAGTGGTTCAGTAGCTGGAGAACACCCTAATGGTGAACACCCTTCTAGGACATTGTTTGTAAGAAATATAAATAGTAACATTGAAGACTCTGAGTTGAGAACCCTGTTTGAGCAATACGGAGACATTCGGACTCTTTACACAGCCTGCAAACACCGTGGGTTTGTTATGATATCATATTATGATATTAGAGCAGCCCGGAATGCGATGAAAGCACTCCAGAACAAACCATTGAGGCGCCGGAAGCTTGACATTCATTACTCGATTCCAAAGGACAATCCTTCTGAGAAAGATATTAATCAGGGCACTCTTGTGGTAGTTAACCTTGATTCTTCTGTTTCTAATGAGGAACTTCGTGAGCTTTTTGGTGTCTATGGGGAAATCAAAGAGATCCGTGAAACACCAAATAGAAGTCATCACAAGTTTATCGAATTTTATGATGTTAGAGCTGCAGAATCTGCTCTTAATGCCATGAACAGGAGTGATATAGCTGGGAAGAGGATTAAGCTTGAGCCAAGTCGTCCTGGAGGTGCAAAAAGGAGCTCGGGGCTACAGTTACCTCAAGAGTTAGAGCAGGATGATTGTGGCCTTTATTTTCAGCAGAGTAGTCCTCCTAGTAACTCTGTTACTGGTTTCTCTGAGTTGCTAACAGGTGCAATTACATCCTCTGGCACAGATAATGGAGCTATTATGACTGTACACTCTGCAGCTCCATCTTTTGAGAACATGTTCCATCATGGGATCTCATCTAGTGTACCCAACAGCCTATCTTCTATGATGAGAGTTGAATCAGCAGTCAGTCAGTCTGGCCTTACGGAGTCCATTCATTCAGCAAGCCCGCTGAAATTTGACATCCACGGCTCACCAGCTTTTCATCCTCATTCACTTCCAGAGTATCATAATGGTTTAACTAATGGCGTCAACTGCAATTCAACAGGCAGTGTATCTGCAAGTATCAATGTCAGACCACCAGATAACAGGCACTTTACCAGAGTCTCAAGTGGGCACTCACGTGAACTTAATGATAGTGCTTTTGGATCTATGGGTAACGTGAACTGCCCTATTCCTGGACATCATTATGCATGGAACAATTCCTTTCAGTCTCGGGCTCCAGGAATGATGTGGCCAAACTCACCATCATTTGTTAATGGAATTTCGGCAGCCCATCCCCCACAGCGGATGCATGGACTTCCTAGAGCACCATCTCATATGTTAAACCCAGCAATGCCCATAAATAAACATCATGTGGGTTCAGCACCAGGGCCTAACCCAATGTGGGACCGGAGACAAGCATATGCAGGGGAATCCCCGAGTCATCTGGATTTCATCCAGGCTCTCTTGGGAATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RRM_1 RRM_2

Protein Analysis

698

Amino Acids

76.19

Weight (kDa)

5.5

Isoelectric Point (pI)

54.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RRM_1 PF00076 268 - 332 1.2e-10 RNA recognition motif
RRM_5 PF13893 350 - 426 2.8e-06 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
RRM_1 PF00076 353 - 418 1.2e-10 RNA recognition motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 67
AccB1I GGYRCC 1 cut(s) 984
AciI CCGC 3 cut(s) 347, 1586, 1924
AclWI GGATC 4 cut(s) 186, 1132, 1496, 1792
AcoI YGGCCR 1 cut(s) 1871
AcsI RAATTY 4 cut(s) 274, 1178, 1592, 1899
AcuI CTGAAG 1 cut(s) 30
AcvI CACGTG 1 cut(s) 1760
AcyI GRCGYC 2 cut(s) 985, 1665
AfaI GTAC 2 cut(s) 1446, 1503
AfiI CCNNNNNNNGG 5 cut(s) 301, 1224, 1814, 1923, 2023
AflII CTTAAG 1 cut(s) 259
AflIII ACRYGT 1 cut(s) 1473
AgsI TTSAA 6 cut(s) 229, 274, 524, 833, 1535, 1680
AjnI CCWGG 6 cut(s) 721, 1270, 1813, 1858, 2005, 2076
AleI CACNNNNGTG 2 cut(s) 1058, 1758
Alw21I GWGCWC 2 cut(s) 1292, 1948
Alw26I GTCTC 7 cut(s) 323, 430, 675, 864, 1747, 1854, 2026
AlwI GGATC 4 cut(s) 186, 1132, 1496, 1792
AlwNI CAGNNNCTG 2 cut(s) 764, 1205
Ama87I CYCGRG 6 cut(s) 301, 400, 599, 1291, 1851, 2056
AoxI GGCC 6 cut(s) 28, 534, 1333, 1555, 1871, 2009
ApeKI GCWGC 4 cut(s) 941, 1196, 1454, 1907
ApoI RAATTY 4 cut(s) 274, 1178, 1592, 1899
AseI ATTAAT 1 cut(s) 1044
Asp700I GAANNNNTTC 1 cut(s) 1475
AspLEI GCGC 1 cut(s) 987
AspS9I GGNCC 4 cut(s) 28, 535, 2009, 2026
AsuC2I CCSGG 1 cut(s) 946
AsuHPI GGTGA 6 cut(s) 134, 173, 226, 794, 1602, 1872
AsuII TTCGAA 1 cut(s) 734
AvaI CYCGRG 6 cut(s) 301, 400, 599, 1291, 1851, 2056
AvaII GGWCC 1 cut(s) 2026
BaeGI GKGCMC 2 cut(s) 1055, 1755
BalI TGGCCA 1 cut(s) 1873
BanI GGYRCC 1 cut(s) 984
BanII GRGCYC 3 cut(s) 600, 1292, 1858
BbrPI CACGTG 1 cut(s) 1760
BbsI GAAGAC 1 cut(s) 840
Bbv12I GWGCWC 2 cut(s) 1292, 1948
BbvI GCAGC 4 cut(s) 953, 1183, 1466, 1919
BceAI ACGGC 2 cut(s) 272, 1621
BcgI CGANNNNNNTGC 2 cut(s) 724, 758
BciT130I CCWGG 6 cut(s) 723, 1272, 1815, 1860, 2007, 2078
BcnI CCSGG 1 cut(s) 946
BcoDI GTCTC 7 cut(s) 323, 430, 675, 864, 1747, 1854, 2026
BfaI CTAG 4 cut(s) 795, 1362, 1497, 1941
BfmI CTRYAG 3 cut(s) 1197, 1298, 1452
BfoI RGCGCY 1 cut(s) 988
BfrI CTTAAG 1 cut(s) 259
BfuAI ACCTGC 1 cut(s) 67
BisI GCNGC 4 cut(s) 942, 1197, 1455, 1908
BlsI GCNGC 4 cut(s) 943, 1198, 1456, 1909
Bme1390I CCNGG 7 cut(s) 723, 946, 1272, 1815, 1860, 2007, 2078
Bme18I GGWCC 1 cut(s) 2026
BmeT110I CYCGRG 6 cut(s) 301, 400, 599, 1291, 1851, 2056
BmgT120I GGNCC 4 cut(s) 28, 535, 2009, 2026
BmiI GGNNCC 3 cut(s) 986, 1857, 2027
BmrFI CCNGG 7 cut(s) 723, 946, 1272, 1815, 1860, 2007, 2078
BmsI GCATC 3 cut(s) 146, 344, 1917
BoxI GACNNNNGTC 1 cut(s) 442
BpiI GAAGAC 1 cut(s) 840
BplI GAGNNNNNCTC 2 cut(s) 1342, 1374
BpmI CTGGAG 6 cut(s) 603, 744, 786, 950, 1293, 1842
Bpu14I TTCGAA 1 cut(s) 734
BpuEI CTTGAG 4 cut(s) 170, 1277, 1293, 1729
BpuMI CCSGG 1 cut(s) 946
BsaAI YACGTR 1 cut(s) 1760
BsaBI GATNNNNATC 1 cut(s) 1044
BsaHI GRCGYC 2 cut(s) 985, 1665
BsaJI CCNNGG 3 cut(s) 904, 1603, 2006
BsaWI WCCGGW 1 cut(s) 2028
Bsc4I CCNNNNNNNGG 5 cut(s) 301, 1224, 1814, 1923, 2023
Bse118I RCCGGY 1 cut(s) 119
Bse1I ACTGG 1 cut(s) 1381
Bse3DI GCAATG 2 cut(s) 752, 1977
Bse8I GATNNNNATC 1 cut(s) 1044
BseBI CCWGG 6 cut(s) 723, 1272, 1815, 1860, 2007, 2078
BseDI CCNNGG 3 cut(s) 904, 1603, 2006
BseGI GGATG 9 cut(s) 634, 675, 1330, 1409, 1599, 1621, 1912, 1932, 2073
BseJI GATNNNNATC 1 cut(s) 1044
BseLI CCNNNNNNNGG 5 cut(s) 301, 1224, 1814, 1923, 2023
BseMI GCAATG 2 cut(s) 752, 1977
BseMII CTCAG 4 cut(s) 405, 831, 1023, 1377
BseNI ACTGG 1 cut(s) 1381
BseRI GAGGAG 2 cut(s) 653, 741
BseSI GKGCMC 2 cut(s) 1055, 1755
BseXI GCAGC 4 cut(s) 953, 1183, 1466, 1919
BseYI CCCAGC 4 cut(s) 221, 623, 1238, 1966
BshFI GGCC 6 cut(s) 30, 536, 1335, 1557, 1873, 2011
BshNI GGYRCC 1 cut(s) 984
BsiHKAI GWGCWC 2 cut(s) 1292, 1948
BsiHKCI CYCGRG 6 cut(s) 301, 400, 599, 1291, 1851, 2056
BsiSI CCGG 4 cut(s) 120, 946, 988, 2029
BslFI GGGAC 2 cut(s) 502, 2039
BslI CCNNNNNNNGG 5 cut(s) 301, 1224, 1814, 1923, 2023
BsmAI GTCTC 7 cut(s) 323, 430, 675, 864, 1747, 1854, 2026
BsmBI CGTCTC 1 cut(s) 675
BsmFI GGGAC 2 cut(s) 502, 2039
BsmI GAATGC 1 cut(s) 955
BsnI GGCC 6 cut(s) 30, 536, 1335, 1557, 1873, 2011
BsoBI CYCGRG 6 cut(s) 301, 400, 599, 1291, 1851, 2056
Bsp119I TTCGAA 1 cut(s) 734
Bsp1286I GDGCHC 6 cut(s) 600, 1055, 1292, 1755, 1858, 1948
Bsp1407I TGTACA 1 cut(s) 1444
Bsp143I GATC 4 cut(s) 178, 1137, 1488, 1784
BspACI CCGC 3 cut(s) 347, 1586, 1924
BspANI GGCC 6 cut(s) 30, 536, 1335, 1557, 1873, 2011
BspCNI CTCAG 4 cut(s) 406, 832, 1024, 1378
BspLI GGNNCC 3 cut(s) 986, 1857, 2027
BspMAI CTGCAG 2 cut(s) 1201, 1456
BspMI ACCTGC 1 cut(s) 67
BspPI GGATC 4 cut(s) 186, 1132, 1496, 1792
BspT104I TTCGAA 1 cut(s) 734
BspT107I GGYRCC 1 cut(s) 984
BspTI CTTAAG 1 cut(s) 259
BsrDI GCAATG 2 cut(s) 752, 1977
BsrFI RCCGGY 1 cut(s) 119
BsrGI TGTACA 1 cut(s) 1444
BsrI ACTGG 1 cut(s) 1381
BssAI RCCGGY 1 cut(s) 119
BssECI CCNNGG 3 cut(s) 904, 1603, 2006
BssMI GATC 4 cut(s) 178, 1137, 1488, 1784
BssNI GRCGYC 2 cut(s) 985, 1665
Bst2UI CCWGG 6 cut(s) 723, 1272, 1815, 1860, 2007, 2078
Bst4CI ACNGT 5 cut(s) 166, 381, 905, 1302, 1444
Bst6I CTCTTC 2 cut(s) 495, 1238
BstACI GRCGYC 2 cut(s) 985, 1665
BstAFI CTTAAG 1 cut(s) 259
BstAPI GCANNNNNTGC 1 cut(s) 1205
BstAUI TGTACA 1 cut(s) 1444
BstBAI YACGTR 1 cut(s) 1760
BstBI TTCGAA 1 cut(s) 734
BstC8I GCNNGC 3 cut(s) 895, 1582, 1586
BstDEI CTNAG 4 cut(s) 414, 840, 1032, 1386
BstDSI CCRYGG 2 cut(s) 904, 1603
BstF5I GGATG 9 cut(s) 634, 675, 1330, 1409, 1599, 1621, 1912, 1932, 2073
BstH2I RGCGCY 1 cut(s) 988
BstHHI GCGC 1 cut(s) 987
BstKTI GATC 4 cut(s) 181, 1140, 1491, 1787
BstMAI GTCTC 7 cut(s) 323, 430, 675, 864, 1747, 1854, 2026
BstMBI GATC 4 cut(s) 178, 1137, 1488, 1784
BstMWI GCNNNNNNNGC 8 cut(s) 245, 254, 950, 959, 991, 1205, 1214, 1671
BstNI CCWGG 6 cut(s) 723, 1272, 1815, 1860, 2007, 2078
BstNSI RCATGY 3 cut(s) 106, 119, 1477
BstPAI GACNNNNGTC 1 cut(s) 442
BstSCI CCNGG 7 cut(s) 721, 944, 1270, 1813, 1858, 2005, 2076
BstSFI CTRYAG 3 cut(s) 1197, 1298, 1452
BstSLI GKGCMC 2 cut(s) 1055, 1755
BstV1I GCAGC 4 cut(s) 953, 1183, 1466, 1919
BstV2I GAAGAC 1 cut(s) 840
BstX2I RGATCY 3 cut(s) 1137, 1488, 1784
BstYI RGATCY 3 cut(s) 1137, 1488, 1784
BsuRI GGCC 6 cut(s) 30, 536, 1335, 1557, 1873, 2011
BtgI CCRYGG 2 cut(s) 904, 1603
BtgZI GCGATG 1 cut(s) 968
BtsCI GGATG 9 cut(s) 634, 675, 1330, 1409, 1599, 1621, 1912, 1932, 2073
BtsI GCAGTG 3 cut(s) 618, 757, 1693
BtsIMutI CAGTG 3 cut(s) 618, 757, 1693
BveI ACCTGC 1 cut(s) 67
Cac8I GCNNGC 3 cut(s) 895, 1582, 1586
CaiI CAGNNNCTG 2 cut(s) 764, 1205
CfoI GCGC 1 cut(s) 987
Cfr10I RCCGGY 1 cut(s) 119
Cfr13I GGNCC 4 cut(s) 28, 535, 2009, 2026
CseI GACGC 1 cut(s) 1654
Csp6I GTAC 2 cut(s) 1445, 1502
CspCI CAANNNNNGTGG 2 cut(s) 886, 921
CviAII CATG 8 cut(s) 103, 116, 1219, 1474, 1484, 1830, 1931, 1991
CviQI GTAC 2 cut(s) 1445, 1502
DdeI CTNAG 4 cut(s) 414, 840, 1032, 1386
DinI GGCGCC 1 cut(s) 986
DpnI GATC 4 cut(s) 180, 1139, 1490, 1786
DpnII GATC 4 cut(s) 178, 1137, 1488, 1784
EaeI YGGCCR 1 cut(s) 1871
Eam1104I CTCTTC 2 cut(s) 495, 1238
EarI CTCTTC 2 cut(s) 495, 1238
Ecl136II GAGCTC 1 cut(s) 1290
Eco24I GRGCYC 3 cut(s) 600, 1292, 1858
Eco32I GATATC 1 cut(s) 921
Eco47I GGWCC 1 cut(s) 2026
Eco53kI GAGCTC 1 cut(s) 1290
Eco57I CTGAAG 1 cut(s) 30
Eco72I CACGTG 1 cut(s) 1760
Eco88I CYCGRG 6 cut(s) 301, 400, 599, 1291, 1851, 2056
EcoICRI GAGCTC 1 cut(s) 1290
EcoO109I RGGNCCY 2 cut(s) 28, 2009
EcoRII CCWGG 6 cut(s) 721, 1270, 1813, 1858, 2005, 2076
EcoRV GATATC 1 cut(s) 921
EcoT22I ATGCAT 2 cut(s) 1831, 1932
EcoT38I GRGCYC 3 cut(s) 600, 1292, 1858
EgeI GGCGCC 1 cut(s) 986
EheI GGCGCC 1 cut(s) 986
Esp3I CGTCTC 1 cut(s) 675
FaeI CATG 8 cut(s) 106, 119, 1222, 1477, 1487, 1833, 1934, 1994
FaqI GGGAC 2 cut(s) 502, 2039
FatI CATG 8 cut(s) 102, 115, 1218, 1473, 1483, 1829, 1930, 1990
FauI CCCGC 1 cut(s) 1593
FauNDI CATATG 2 cut(s) 1956, 2041
Fnu4HI GCNGC 4 cut(s) 942, 1197, 1455, 1908
FokI GGATG 9 cut(s) 641, 682, 1337, 1396, 1586, 1608, 1899, 1939, 2060
FriOI GRGCYC 3 cut(s) 600, 1292, 1858
Fsp4HI GCNGC 4 cut(s) 942, 1197, 1455, 1908
FspBI CTAG 4 cut(s) 795, 1362, 1497, 1941
GlaI GCGC 1 cut(s) 986
GluI GCNGC 4 cut(s) 942, 1197, 1455, 1908
GsaI CCCAGC 4 cut(s) 225, 627, 1242, 1970
GsuI CTGGAG 6 cut(s) 603, 744, 786, 950, 1293, 1842
HaeII RGCGCY 1 cut(s) 988
HaeIII GGCC 6 cut(s) 30, 536, 1335, 1557, 1873, 2011
HapII CCGG 4 cut(s) 120, 946, 988, 2029
HgaI GACGC 1 cut(s) 1654
HhaI GCGC 1 cut(s) 987
Hin1I GRCGYC 2 cut(s) 985, 1665
Hin1II CATG 8 cut(s) 106, 119, 1222, 1477, 1487, 1833, 1934, 1994
Hin6I GCGC 1 cut(s) 985
HinP1I GCGC 1 cut(s) 985
HincII GTYRAC 2 cut(s) 1069, 1669
HindII GTYRAC 2 cut(s) 1069, 1669
HindIII AAGCTT 2 cut(s) 992, 1253
HpaI GTTAAC 1 cut(s) 1069
HpaII CCGG 4 cut(s) 120, 946, 988, 2029
HphI GGTGA 6 cut(s) 134, 173, 226, 794, 1602, 1872
Hpy166II GTNNAC 7 cut(s) 785, 1069, 1447, 1502, 1669, 1763, 1801
Hpy8I GTNNAC 7 cut(s) 785, 1069, 1447, 1502, 1669, 1763, 1801
HpyAV CCTTC 4 cut(s) 344, 563, 801, 1038
HpyCH4III ACNGT 5 cut(s) 166, 381, 905, 1302, 1444
HpyCH4IV ACGT 2 cut(s) 1759, 1797
HpyF10VI GCNNNNNNNGC 8 cut(s) 245, 254, 950, 959, 991, 1205, 1214, 1671
HpyF3I CTNAG 4 cut(s) 414, 840, 1032, 1386
HpySE526I ACGT 2 cut(s) 1759, 1797
Hsp92I GRCGYC 2 cut(s) 985, 1665
Hsp92II CATG 8 cut(s) 106, 119, 1222, 1477, 1487, 1833, 1934, 1994
HspAI GCGC 1 cut(s) 985
KasI GGCGCC 1 cut(s) 984
KspAI GTTAAC 1 cut(s) 1069
Kzo9I GATC 4 cut(s) 178, 1137, 1488, 1784
LmnI GCTCC 4 cut(s) 1287, 1430, 1462, 1861
Lsp1109I GCAGC 4 cut(s) 953, 1183, 1466, 1919
LweI GCATC 3 cut(s) 146, 344, 1917
MaeI CTAG 4 cut(s) 795, 1362, 1497, 1941
MaeII ACGT 2 cut(s) 1759, 1797
MaeIII GTNAC 7 cut(s) 129, 586, 824, 1302, 1364, 1372, 1793
MalI GATC 4 cut(s) 180, 1139, 1490, 1786
MboI GATC 4 cut(s) 178, 1137, 1488, 1784
MflI RGATCY 3 cut(s) 1137, 1488, 1784
MhlI GDGCHC 6 cut(s) 600, 1055, 1292, 1755, 1858, 1948
MlsI TGGCCA 1 cut(s) 1873
MluCI AATT 8 cut(s) 274, 709, 1178, 1404, 1592, 1675, 1837, 1899
MluNI TGGCCA 1 cut(s) 1873
Mly113I GGCGCC 1 cut(s) 985
MlyI GAGTC 7 cut(s) 293, 524, 830, 874, 1574, 1749, 2068
MmeI TCCRAC 1 cut(s) 624
Mox20I TGGCCA 1 cut(s) 1873
Mph1103I ATGCAT 2 cut(s) 1831, 1932
MroXI GAANNNNTTC 1 cut(s) 1475
MscI TGGCCA 1 cut(s) 1873
MslI CAYNNNNRTG 5 cut(s) 120, 777, 1058, 1758, 1824
Msp20I TGGCCA 1 cut(s) 1873
MspA1I CMGCKG 3 cut(s) 698, 1588, 1924
MspCI CTTAAG 1 cut(s) 259
MspI CCGG 4 cut(s) 120, 946, 988, 2029
MspR9I CCNGG 7 cut(s) 723, 946, 1272, 1815, 1860, 2007, 2078
Mva1269I GAATGC 1 cut(s) 955
MvaI CCWGG 6 cut(s) 723, 1272, 1815, 1860, 2007, 2078
MwoI GCNNNNNNNGC 8 cut(s) 245, 254, 950, 959, 991, 1205, 1214, 1671
NarI GGCGCC 1 cut(s) 985
NciI CCSGG 1 cut(s) 946
NdeI CATATG 2 cut(s) 1956, 2041
NdeII GATC 4 cut(s) 178, 1137, 1488, 1784
NlaIII CATG 8 cut(s) 106, 119, 1222, 1477, 1487, 1833, 1934, 1994
NlaIV GGNNCC 3 cut(s) 986, 1857, 2027
NmuCI GTSAC 1 cut(s) 129
NsiI ATGCAT 2 cut(s) 1831, 1932
NspI RCATGY 3 cut(s) 106, 119, 1477
NspV TTCGAA 1 cut(s) 734
OliI CACNNNNGTG 2 cut(s) 1058, 1758
PaeR7I CTCGAG 2 cut(s) 400, 599
PciI ACATGT 1 cut(s) 1473
PctI GAATGC 1 cut(s) 955
PdmI GAANNNNTTC 1 cut(s) 1475
PfeI GAWTC 5 cut(s) 1012, 1076, 1202, 1535, 2051
PfoI TCCNGGA 4 cut(s) 721, 1270, 1813, 1858
PkrI GCNGC 4 cut(s) 943, 1198, 1456, 1909
PleI GAGTC 7 cut(s) 293, 523, 830, 874, 1573, 1748, 2067
PluTI GGCGCC 1 cut(s) 988
PmaCI CACGTG 1 cut(s) 1760
PmlI CACGTG 1 cut(s) 1760
PpsI GAGTC 7 cut(s) 293, 523, 830, 874, 1573, 1748, 2067
Ppu21I YACGTR 1 cut(s) 1760
PscI ACATGT 1 cut(s) 1473
PshAI GACNNNNGTC 1 cut(s) 442
PshBI ATTAAT 1 cut(s) 1044
Psp124BI GAGCTC 1 cut(s) 1292
Psp6I CCWGG 6 cut(s) 721, 1270, 1813, 1858, 2005, 2076
PspCI CACGTG 1 cut(s) 1760
PspFI CCCAGC 4 cut(s) 221, 623, 1238, 1966
PspGI CCWGG 6 cut(s) 721, 1270, 1813, 1858, 2005, 2076
PspN4I GGNNCC 3 cut(s) 986, 1857, 2027
PspPI GGNCC 4 cut(s) 28, 535, 2009, 2026
PspXI VCTCGAGB 1 cut(s) 599
PstI CTGCAG 2 cut(s) 1201, 1456
PstNI CAGNNNCTG 2 cut(s) 764, 1205
PsuI RGATCY 3 cut(s) 1137, 1488, 1784
PvuII CAGCTG 1 cut(s) 698
RsaI GTAC 2 cut(s) 1446, 1503
RsaNI GTAC 2 cut(s) 1445, 1502
RseI CAYNNNNRTG 5 cut(s) 120, 777, 1058, 1758, 1824
SacI GAGCTC 1 cut(s) 1292
SatI GCNGC 4 cut(s) 942, 1197, 1455, 1908
Sau3AI GATC 4 cut(s) 178, 1137, 1488, 1784
Sau96I GGNCC 4 cut(s) 28, 535, 2009, 2026
SchI GAGTC 7 cut(s) 293, 524, 830, 874, 1574, 1749, 2068
ScrFI CCNGG 7 cut(s) 723, 946, 1272, 1815, 1860, 2007, 2078
SduI GDGCHC 6 cut(s) 600, 1055, 1292, 1755, 1858, 1948
SfaNI GCATC 3 cut(s) 146, 344, 1917
SfcI CTRYAG 3 cut(s) 1197, 1298, 1452
SfoI GGCGCC 1 cut(s) 986
Sfr274I CTCGAG 2 cut(s) 400, 599
SfuI TTCGAA 1 cut(s) 734
SinI GGWCC 1 cut(s) 2026
SlaI CTCGAG 2 cut(s) 400, 599
SmiMI CAYNNNNRTG 5 cut(s) 120, 777, 1058, 1758, 1824
SmlI CTYRAG 7 cut(s) 149, 259, 400, 599, 1256, 1308, 1744
SmoI CTYRAG 7 cut(s) 149, 259, 400, 599, 1256, 1308, 1744
Sse9I AATT 8 cut(s) 274, 709, 1178, 1404, 1592, 1675, 1837, 1899
SsiI CCGC 3 cut(s) 347, 1586, 1924
SspDI GGCGCC 1 cut(s) 984
SspMI CTAG 4 cut(s) 795, 1362, 1497, 1941
SstI GAGCTC 1 cut(s) 1292
StyD4I CCNGG 7 cut(s) 721, 944, 1270, 1813, 1858, 2005, 2076
TaaI ACNGT 5 cut(s) 166, 381, 905, 1302, 1444
TaiI ACGT 2 cut(s) 1762, 1800
TaqI TCGA 7 cut(s) 281, 401, 513, 600, 734, 1010, 1176
TasI AATT 8 cut(s) 274, 709, 1178, 1404, 1592, 1675, 1837, 1899
TatI WGTACW 1 cut(s) 1444
TfiI GAWTC 5 cut(s) 1012, 1076, 1202, 1535, 2051
TscAI CASTG 3 cut(s) 625, 757, 1693
TseFI GTSAC 1 cut(s) 129
TseI GCWGC 4 cut(s) 941, 1196, 1454, 1907
Tsp45I GTSAC 1 cut(s) 129
TspDTI ATGAA 8 cut(s) 258, 396, 971, 992, 1235, 1562, 1610, 2062
TspGWI ACGGA 3 cut(s) 882, 1130, 1577
TspRI CASTG 3 cut(s) 625, 757, 1693
Vha464I CTTAAG 1 cut(s) 259
VpaK11BI GGWCC 1 cut(s) 2026
VspI ATTAAT 1 cut(s) 1044
XapI RAATTY 4 cut(s) 274, 1178, 1592, 1899
XceI RCATGY 3 cut(s) 106, 119, 1477
XcmI CCANNNNNNNNNTGG 1 cut(s) 1866
XhoI CTCGAG 2 cut(s) 400, 599
XmnI GAANNNNTTC 1 cut(s) 1475
XspI CTAG 4 cut(s) 795, 1362, 1497, 1941
Zsp2I ATGCAT 2 cut(s) 1831, 1932
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.