Transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g22890 FvH4_4g22890 |
| malus_domestica | MD13G1128900.v1.1 |
| prunus_persica | Prupe.1G217700_v2.0.a1 Prupe.1G217700_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr4g0429161 |
| rosa_laevigata | RLG00000007093 |
| rosa_multiflora | Rmu_sc0000846.1_g000009 |
| rosa_roxburghii | Rroxscaffold_5G00370810 |
| rosa_rugosa | Rorug04G0233300 Rorug04G0233400 Rorug04G0233500 |
| rosa_samantha | Rh4AG289300 Rh4BG295300 Rh4CG310900 Rh4DG292300 |
| rosa_wichuraiana | Rw4G025070 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 122, 272 |
| AclWI | GGATC | 3 cut(s) | 12, 453, 457 |
| AcuI | CTGAAG | 2 cut(s) | 41, 69 |
| AfaI | GTAC | 1 cut(s) | 216 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 473 |
| AgsI | TTSAA | 3 cut(s) | 59, 242, 308 |
| AjnI | CCWGG | 1 cut(s) | 181 |
| AluBI | AGCT | 2 cut(s) | 163, 515 |
| AluI | AGCT | 2 cut(s) | 163, 515 |
| Alw26I | GTCTC | 1 cut(s) | 388 |
| AlwI | GGATC | 3 cut(s) | 12, 453, 457 |
| AspLEI | GCGC | 1 cut(s) | 412 |
| AsuHPI | GGTGA | 1 cut(s) | 107 |
| AxyI | CCTNAGG | 2 cut(s) | 345, 468 |
| BbsI | GAAGAC | 1 cut(s) | 507 |
| BccI | CCATC | 1 cut(s) | 467 |
| BciT130I | CCWGG | 1 cut(s) | 183 |
| BcoDI | GTCTC | 1 cut(s) | 388 |
| BfmI | CTRYAG | 1 cut(s) | 248 |
| BisI | GCNGC | 1 cut(s) | 273 |
| BlsI | GCNGC | 1 cut(s) | 274 |
| Bme1390I | CCNGG | 1 cut(s) | 183 |
| BmrFI | CCNGG | 1 cut(s) | 183 |
| BpiI | GAAGAC | 1 cut(s) | 507 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 362, 394 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 473 |
| Bse1I | ACTGG | 2 cut(s) | 205, 222 |
| Bse21I | CCTNAGG | 2 cut(s) | 345, 468 |
| BseBI | CCWGG | 1 cut(s) | 183 |
| BseGI | GGATG | 3 cut(s) | 191, 226, 478 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 473 |
| BseMII | CTCAG | 2 cut(s) | 336, 482 |
| BseNI | ACTGG | 2 cut(s) | 205, 222 |
| BslFI | GGGAC | 1 cut(s) | 250 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 473 |
| BsmAI | GTCTC | 1 cut(s) | 388 |
| BsmFI | GGGAC | 1 cut(s) | 250 |
| Bsp143I | GATC | 4 cut(s) | 4, 225, 445, 462 |
| BspACI | CCGC | 2 cut(s) | 122, 272 |
| BspCNI | CTCAG | 2 cut(s) | 337, 481 |
| BspPI | GGATC | 3 cut(s) | 12, 453, 457 |
| BspQI | GCTCTTC | 2 cut(s) | 26, 130 |
| BsrI | ACTGG | 2 cut(s) | 205, 222 |
| BssMI | GATC | 4 cut(s) | 4, 225, 445, 462 |
| Bst2UI | CCWGG | 1 cut(s) | 183 |
| Bst4CI | ACNGT | 1 cut(s) | 407 |
| Bst6I | CTCTTC | 3 cut(s) | 17, 26, 130 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 281, 407 |
| BstDEI | CTNAG | 2 cut(s) | 345, 468 |
| BstF5I | GGATG | 3 cut(s) | 191, 226, 478 |
| BstHHI | GCGC | 1 cut(s) | 412 |
| BstKTI | GATC | 4 cut(s) | 7, 228, 448, 465 |
| BstMAI | GTCTC | 1 cut(s) | 388 |
| BstMBI | GATC | 4 cut(s) | 4, 225, 445, 462 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 128, 137, 281, 407 |
| BstNI | CCWGG | 1 cut(s) | 183 |
| BstNSI | RCATGY | 1 cut(s) | 339 |
| BstSCI | CCNGG | 1 cut(s) | 181 |
| BstSFI | CTRYAG | 1 cut(s) | 248 |
| BstV2I | GAAGAC | 1 cut(s) | 507 |
| Bsu36I | CCTNAGG | 2 cut(s) | 345, 468 |
| BtsCI | GGATG | 3 cut(s) | 191, 226, 478 |
| BtsIMutI | CAGTG | 1 cut(s) | 412 |
| CfoI | GCGC | 1 cut(s) | 412 |
| Csp6I | GTAC | 1 cut(s) | 215 |
| CviAII | CATG | 4 cut(s) | 212, 336, 391, 496 |
| CviJI | RGCY | 8 cut(s) | 19, 117, 163, 209, 352, 455, 508, 515 |
| CviKI_1 | RGCY | 8 cut(s) | 19, 117, 163, 209, 352, 455, 508, 515 |
| CviQI | GTAC | 1 cut(s) | 215 |
| DdeI | CTNAG | 2 cut(s) | 345, 468 |
| DpnI | GATC | 4 cut(s) | 6, 227, 447, 464 |
| DpnII | GATC | 4 cut(s) | 4, 225, 445, 462 |
| Eam1104I | CTCTTC | 3 cut(s) | 17, 26, 130 |
| EarI | CTCTTC | 3 cut(s) | 17, 26, 130 |
| Eco57I | CTGAAG | 2 cut(s) | 41, 69 |
| Eco81I | CCTNAGG | 2 cut(s) | 345, 468 |
| EcoRII | CCWGG | 1 cut(s) | 181 |
| EcoT22I | ATGCAT | 1 cut(s) | 337 |
| FaeI | CATG | 4 cut(s) | 215, 339, 394, 499 |
| FaiI | YATR | 7 cut(s) | 72, 152, 213, 237, 337, 392, 497 |
| FaqI | GGGAC | 1 cut(s) | 250 |
| FatI | CATG | 4 cut(s) | 211, 335, 390, 495 |
| Fnu4HI | GCNGC | 1 cut(s) | 273 |
| FokI | GGATG | 3 cut(s) | 198, 233, 485 |
| Fsp4HI | GCNGC | 1 cut(s) | 273 |
| GlaI | GCGC | 1 cut(s) | 411 |
| GluI | GCNGC | 1 cut(s) | 273 |
| HhaI | GCGC | 1 cut(s) | 412 |
| Hin1II | CATG | 4 cut(s) | 215, 339, 394, 499 |
| Hin6I | GCGC | 1 cut(s) | 410 |
| HinP1I | GCGC | 1 cut(s) | 410 |
| HinfI | GANTC | 6 cut(s) | 253, 263, 292, 319, 371, 419 |
| HphI | GGTGA | 1 cut(s) | 107 |
| Hpy188I | TCNGA | 2 cut(s) | 450, 462 |
| Hpy188III | TCNNGA | 2 cut(s) | 344, 470 |
| HpyAV | CCTTC | 2 cut(s) | 44, 84 |
| HpyCH4III | ACNGT | 1 cut(s) | 407 |
| HpyCH4V | TGCA | 3 cut(s) | 169, 335, 401 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 128, 137, 281, 407 |
| HpyF3I | CTNAG | 2 cut(s) | 345, 468 |
| Hsp92II | CATG | 4 cut(s) | 215, 339, 394, 499 |
| HspAI | GCGC | 1 cut(s) | 410 |
| Kzo9I | GATC | 4 cut(s) | 4, 225, 445, 462 |
| LguI | GCTCTTC | 2 cut(s) | 26, 130 |
| LpnPI | CCDG | 9 cut(s) | 168, 186, 195, 203, 357, 381, 428, 455, 518 |
| MalI | GATC | 4 cut(s) | 6, 227, 447, 464 |
| MboI | GATC | 4 cut(s) | 4, 225, 445, 462 |
| MboII | GAAGA | 6 cut(s) | 34, 40, 43, 77, 147, 512 |
| MluCI | AATT | 1 cut(s) | 242 |
| MlyI | GAGTC | 2 cut(s) | 272, 380 |
| MnlI | CCTC | 3 cut(s) | 18, 340, 477 |
| Mph1103I | ATGCAT | 1 cut(s) | 337 |
| MseI | TTAA | 2 cut(s) | 12, 81 |
| MspR9I | CCNGG | 1 cut(s) | 183 |
| MvaI | CCWGG | 1 cut(s) | 183 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 128, 137, 281, 407 |
| NdeII | GATC | 4 cut(s) | 4, 225, 445, 462 |
| NlaIII | CATG | 4 cut(s) | 215, 339, 394, 499 |
| NsiI | ATGCAT | 1 cut(s) | 337 |
| NspI | RCATGY | 1 cut(s) | 339 |
| PciSI | GCTCTTC | 2 cut(s) | 26, 130 |
| PfeI | GAWTC | 4 cut(s) | 253, 292, 319, 419 |
| PfoI | TCCNGGA | 1 cut(s) | 181 |
| PkrI | GCNGC | 1 cut(s) | 274 |
| PleI | GAGTC | 2 cut(s) | 271, 379 |
| PpsI | GAGTC | 2 cut(s) | 271, 379 |
| Psp6I | CCWGG | 1 cut(s) | 181 |
| PspGI | CCWGG | 1 cut(s) | 181 |
| RsaI | GTAC | 1 cut(s) | 216 |
| RsaNI | GTAC | 1 cut(s) | 215 |
| SapI | GCTCTTC | 2 cut(s) | 26, 130 |
| SaqAI | TTAA | 2 cut(s) | 12, 81 |
| SatI | GCNGC | 1 cut(s) | 273 |
| Sau3AI | GATC | 4 cut(s) | 4, 225, 445, 462 |
| SchI | GAGTC | 2 cut(s) | 272, 380 |
| ScrFI | CCNGG | 1 cut(s) | 183 |
| SetI | ASST | 3 cut(s) | 165, 282, 517 |
| SfcI | CTRYAG | 1 cut(s) | 248 |
| Sse9I | AATT | 1 cut(s) | 242 |
| SsiI | CCGC | 2 cut(s) | 122, 272 |
| StyD4I | CCNGG | 1 cut(s) | 181 |
| TaaI | ACNGT | 1 cut(s) | 407 |
| TasI | AATT | 1 cut(s) | 242 |
| TatI | WGTACW | 1 cut(s) | 214 |
| TauI | GCSGC | 1 cut(s) | 275 |
| TfiI | GAWTC | 4 cut(s) | 253, 292, 319, 419 |
| Tru1I | TTAA | 2 cut(s) | 12, 81 |
| Tru9I | TTAA | 2 cut(s) | 12, 81 |
| TscAI | CASTG | 1 cut(s) | 412 |
| TspDTI | ATGAA | 2 cut(s) | 173, 379 |
| TspRI | CASTG | 1 cut(s) | 412 |
| XceI | RCATGY | 1 cut(s) | 339 |
| Zsp2I | ATGCAT | 1 cut(s) | 337 |