Transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g22890 FvH4_4g22890 |
| malus_domestica | MD13G1128900.v1.1 |
| prunus_persica | Prupe.1G217700_v2.0.a1 Prupe.1G217700_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr4g0429161 |
| rosa_laevigata | RLG00000007093 |
| rosa_multiflora | Rmu_sc0000846.1_g000009 |
| rosa_roxburghii | Rroxscaffold_5G00370810 |
| rosa_rugosa | Rorug04G0233300 Rorug04G0233400 Rorug04G0233500 |
| rosa_samantha | Rh4AG289300 Rh4BG295300 Rh4CG310900 Rh4DG292300 |
| rosa_wichuraiana | Rw4G025070 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 3 cut(s) | 101, 252, 306 |
| AclWI | GGATC | 1 cut(s) | 279 |
| AcuI | CTGAAG | 1 cut(s) | 522 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 464 |
| AgsI | TTSAA | 1 cut(s) | 221 |
| AjnI | CCWGG | 2 cut(s) | 160, 486 |
| AluBI | AGCT | 5 cut(s) | 259, 357, 446, 506, 534 |
| AluI | AGCT | 5 cut(s) | 259, 357, 446, 506, 534 |
| AlwI | GGATC | 1 cut(s) | 279 |
| ApeKI | GCWGC | 2 cut(s) | 26, 496 |
| AspLEI | GCGC | 1 cut(s) | 121 |
| AspS9I | GGNCC | 1 cut(s) | 484 |
| AsuHPI | GGTGA | 1 cut(s) | 86 |
| AvaII | GGWCC | 1 cut(s) | 484 |
| AxyI | CCTNAGG | 1 cut(s) | 324 |
| BbvI | GCAGC | 2 cut(s) | 13, 508 |
| BceAI | ACGGC | 1 cut(s) | 322 |
| BciT130I | CCWGG | 2 cut(s) | 162, 488 |
| BclI | TGATCA | 1 cut(s) | 427 |
| BfaI | CTAG | 3 cut(s) | 66, 98, 354 |
| BfmI | CTRYAG | 2 cut(s) | 27, 227 |
| BisI | GCNGC | 3 cut(s) | 27, 252, 497 |
| BlpI | GCTNAGC | 1 cut(s) | 535 |
| BlsI | GCNGC | 3 cut(s) | 28, 253, 498 |
| Bme1390I | CCNGG | 2 cut(s) | 162, 488 |
| Bme18I | GGWCC | 1 cut(s) | 484 |
| BmgT120I | GGNCC | 1 cut(s) | 484 |
| BmrFI | CCNGG | 2 cut(s) | 162, 488 |
| BmsI | GCATC | 1 cut(s) | 155 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 341, 373 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 535 |
| BsaBI | GATNNNNATC | 1 cut(s) | 432 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 464 |
| Bse1I | ACTGG | 2 cut(s) | 184, 201 |
| Bse21I | CCTNAGG | 1 cut(s) | 324 |
| Bse8I | GATNNNNATC | 1 cut(s) | 432 |
| BseBI | CCWGG | 2 cut(s) | 162, 488 |
| BseGI | GGATG | 3 cut(s) | 170, 205, 430 |
| BseJI | GATNNNNATC | 1 cut(s) | 432 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 464 |
| BseMII | CTCAG | 2 cut(s) | 315, 473 |
| BseNI | ACTGG | 2 cut(s) | 184, 201 |
| BseRI | GAGGAG | 1 cut(s) | 25 |
| BseXI | GCAGC | 2 cut(s) | 13, 508 |
| BslFI | GGGAC | 1 cut(s) | 229 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 464 |
| BsmFI | GGGAC | 1 cut(s) | 229 |
| Bsp143I | GATC | 2 cut(s) | 271, 427 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 535 |
| BspACI | CCGC | 3 cut(s) | 101, 252, 306 |
| BspCNI | CTCAG | 2 cut(s) | 316, 472 |
| BspMAI | CTGCAG | 1 cut(s) | 31 |
| BspPI | GGATC | 1 cut(s) | 279 |
| BspQI | GCTCTTC | 2 cut(s) | 109, 486 |
| BsrI | ACTGG | 2 cut(s) | 184, 201 |
| BssMI | GATC | 2 cut(s) | 271, 427 |
| Bst2UI | CCWGG | 2 cut(s) | 162, 488 |
| Bst4CI | ACNGT | 4 cut(s) | 89, 95, 290, 386 |
| Bst6I | CTCTTC | 3 cut(s) | 2, 109, 486 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 260 |
| BstC8I | GCNNGC | 1 cut(s) | 261 |
| BstDEI | CTNAG | 4 cut(s) | 324, 459, 530, 535 |
| BstF5I | GGATG | 3 cut(s) | 170, 205, 430 |
| BstHHI | GCGC | 1 cut(s) | 121 |
| BstKTI | GATC | 2 cut(s) | 274, 430 |
| BstMBI | GATC | 2 cut(s) | 271, 427 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 35, 107, 116, 260, 343 |
| BstNI | CCWGG | 2 cut(s) | 162, 488 |
| BstNSI | RCATGY | 1 cut(s) | 318 |
| BstSCI | CCNGG | 2 cut(s) | 160, 486 |
| BstSFI | CTRYAG | 2 cut(s) | 27, 227 |
| BstV1I | GCAGC | 2 cut(s) | 13, 508 |
| BstX2I | RGATCY | 1 cut(s) | 271 |
| BstYI | RGATCY | 1 cut(s) | 271 |
| Bsu36I | CCTNAGG | 1 cut(s) | 324 |
| BtsCI | GGATG | 3 cut(s) | 170, 205, 430 |
| Cac8I | GCNNGC | 1 cut(s) | 261 |
| CfoI | GCGC | 1 cut(s) | 121 |
| Cfr13I | GGNCC | 1 cut(s) | 484 |
| CviAII | CATG | 3 cut(s) | 277, 315, 370 |
| DdeI | CTNAG | 4 cut(s) | 324, 459, 530, 535 |
| DpnI | GATC | 2 cut(s) | 273, 429 |
| DpnII | GATC | 2 cut(s) | 271, 427 |
| Eam1104I | CTCTTC | 3 cut(s) | 2, 109, 486 |
| EarI | CTCTTC | 3 cut(s) | 2, 109, 486 |
| Eco47I | GGWCC | 1 cut(s) | 484 |
| Eco57I | CTGAAG | 1 cut(s) | 522 |
| Eco81I | CCTNAGG | 1 cut(s) | 324 |
| EcoRII | CCWGG | 2 cut(s) | 160, 486 |
| EcoT22I | ATGCAT | 1 cut(s) | 316 |
| FaeI | CATG | 3 cut(s) | 280, 318, 373 |
| FaqI | GGGAC | 1 cut(s) | 229 |
| FatI | CATG | 3 cut(s) | 276, 314, 369 |
| FbaI | TGATCA | 1 cut(s) | 427 |
| Fnu4HI | GCNGC | 3 cut(s) | 27, 252, 497 |
| FokI | GGATG | 3 cut(s) | 177, 212, 437 |
| Fsp4HI | GCNGC | 3 cut(s) | 27, 252, 497 |
| FspBI | CTAG | 3 cut(s) | 66, 98, 354 |
| GlaI | GCGC | 1 cut(s) | 120 |
| GluI | GCNGC | 3 cut(s) | 27, 252, 497 |
| HhaI | GCGC | 1 cut(s) | 121 |
| Hin1II | CATG | 3 cut(s) | 280, 318, 373 |
| Hin6I | GCGC | 1 cut(s) | 119 |
| HinP1I | GCGC | 1 cut(s) | 119 |
| HindIII | AAGCTT | 1 cut(s) | 257 |
| HinfI | GANTC | 6 cut(s) | 33, 232, 242, 298, 350, 433 |
| HphI | GGTGA | 1 cut(s) | 86 |
| Hpy188I | TCNGA | 3 cut(s) | 128, 432, 441 |
| Hpy188III | TCNNGA | 1 cut(s) | 323 |
| HpyAV | CCTTC | 1 cut(s) | 536 |
| HpyCH4III | ACNGT | 4 cut(s) | 89, 95, 290, 386 |
| HpyCH4V | TGCA | 5 cut(s) | 29, 148, 314, 380, 523 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 35, 107, 116, 260, 343 |
| HpyF3I | CTNAG | 4 cut(s) | 324, 459, 530, 535 |
| Hsp92II | CATG | 3 cut(s) | 280, 318, 373 |
| HspAI | GCGC | 1 cut(s) | 119 |
| Ksp22I | TGATCA | 1 cut(s) | 427 |
| Kzo9I | GATC | 2 cut(s) | 271, 427 |
| LguI | GCTCTTC | 2 cut(s) | 109, 486 |
| LmnI | GCTCC | 1 cut(s) | 12 |
| Lsp1109I | GCAGC | 2 cut(s) | 13, 508 |
| LweI | GCATC | 1 cut(s) | 155 |
| MaeI | CTAG | 3 cut(s) | 66, 98, 354 |
| MaeIII | GTNAC | 1 cut(s) | 89 |
| MalI | GATC | 2 cut(s) | 273, 429 |
| MboI | GATC | 2 cut(s) | 271, 427 |
| MboII | GAAGA | 4 cut(s) | 19, 56, 126, 503 |
| MfeI | CAATTG | 1 cut(s) | 221 |
| MflI | RGATCY | 1 cut(s) | 271 |
| MluCI | AATT | 2 cut(s) | 221, 541 |
| MlyI | GAGTC | 3 cut(s) | 42, 251, 359 |
| MnlI | CCTC | 5 cut(s) | 3, 63, 319, 415, 468 |
| Mph1103I | ATGCAT | 1 cut(s) | 316 |
| MspR9I | CCNGG | 2 cut(s) | 162, 488 |
| MunI | CAATTG | 1 cut(s) | 221 |
| MvaI | CCWGG | 2 cut(s) | 162, 488 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 35, 107, 116, 260, 343 |
| NdeII | GATC | 2 cut(s) | 271, 427 |
| NlaIII | CATG | 3 cut(s) | 280, 318, 373 |
| NmuCI | GTSAC | 1 cut(s) | 89 |
| NsiI | ATGCAT | 1 cut(s) | 316 |
| NspI | RCATGY | 1 cut(s) | 318 |
| PciSI | GCTCTTC | 2 cut(s) | 109, 486 |
| PfeI | GAWTC | 3 cut(s) | 232, 298, 433 |
| PfoI | TCCNGGA | 1 cut(s) | 160 |
| PkrI | GCNGC | 3 cut(s) | 28, 253, 498 |
| PleI | GAGTC | 3 cut(s) | 41, 250, 358 |
| PpsI | GAGTC | 3 cut(s) | 41, 250, 358 |
| Psp6I | CCWGG | 2 cut(s) | 160, 486 |
| PspGI | CCWGG | 2 cut(s) | 160, 486 |
| PspPI | GGNCC | 1 cut(s) | 484 |
| PstI | CTGCAG | 1 cut(s) | 31 |
| PsuI | RGATCY | 1 cut(s) | 271 |
| SapI | GCTCTTC | 2 cut(s) | 109, 486 |
| SatI | GCNGC | 3 cut(s) | 27, 252, 497 |
| Sau3AI | GATC | 2 cut(s) | 271, 427 |
| Sau96I | GGNCC | 1 cut(s) | 484 |
| SchI | GAGTC | 3 cut(s) | 42, 251, 359 |
| ScrFI | CCNGG | 2 cut(s) | 162, 488 |
| SetI | ASST | 7 cut(s) | 261, 359, 448, 489, 508, 528, 536 |
| SfaNI | GCATC | 1 cut(s) | 155 |
| SfcI | CTRYAG | 2 cut(s) | 27, 227 |
| SinI | GGWCC | 1 cut(s) | 484 |
| Sse9I | AATT | 2 cut(s) | 221, 541 |
| SsiI | CCGC | 3 cut(s) | 101, 252, 306 |
| SspMI | CTAG | 3 cut(s) | 66, 98, 354 |
| StyD4I | CCNGG | 2 cut(s) | 160, 486 |
| TaaI | ACNGT | 4 cut(s) | 89, 95, 290, 386 |
| TasI | AATT | 2 cut(s) | 221, 541 |
| TauI | GCSGC | 1 cut(s) | 254 |
| TfiI | GAWTC | 3 cut(s) | 232, 298, 433 |
| TseFI | GTSAC | 1 cut(s) | 89 |
| TseI | GCWGC | 2 cut(s) | 26, 496 |
| Tsp45I | GTSAC | 1 cut(s) | 89 |
| TspDTI | ATGAA | 2 cut(s) | 152, 358 |
| VpaK11BI | GGWCC | 1 cut(s) | 484 |
| XceI | RCATGY | 1 cut(s) | 318 |
| XspI | CTAG | 3 cut(s) | 66, 98, 354 |
| Zsp2I | ATGCAT | 1 cut(s) | 316 |