FvH4_4g24010
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0010877
Physical Location & Seq
Reverse (-)
26289381 .. 26294040
4660 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g24010.t3

Sequence Viewer

Length: 2127 bp
ATGAAGGATTCCCTCTCCCTCTTCTTCTTATTCCTCCTATGCTTCATTGACCTTTCTACCCCTTTGACCCCCGACGGCCTCTCCCTCCTCTCCCTCAAATCCGCCGTCGACTCCTCCTCCGCATTCTCCGACTGGAGCGACTCCGACGCCTCGCCGTGCCGATGGACCGGCATTTCCTGCATGAACATCACCGGCTTCCCCGACCCCCGCGTCGTCGGGATCGCCCTCTCCGGCAAGAACCTCCGCGGCTACATCCCCTCCGAGCTCGGCAACTTAGTCTACCTCCGCCGCCTCAACCTCCACACCAACAACTTCCACGGCTCCATCCCCACTCAGCTCTTCAACGCCACGTCACTCCACTCCCTCTTCCTCTACGGTAACAACCTCTCCGGCCAGCTCCCGCCGTCCATCTGCAACCTCCCCCGCCTCCAGAACCTCGACCTCTCCAACAACTCCCTCTCCGGCTCTTTAGACACAGTCTTCAACAACTGTAAGCAGCTGCAGAGACTGATCCTCGCCGGAAATAAATTCTCCGGCGAAATTCCGGCCGGGATTTGGTCCGGCATGGAGAATCTCCTCCAGCTCGACATCTCCGCCAACGCCTTCGCCGGACCGATCCCGGCCGATCTCGGCGACCTGAAGTCGCTCTCCGGCACGCTCAACCTCTCGTACAACCACTTATCCGGCGAGATTCCGAAGTCGCTGGGAGATTTACCGGTGACGGTTAGCTTCGATCTCCGTCACAACAACTTCAGCGGCGAAATCCCCCAAACGGGGTCGTTTTCGAATCAAGGCCCAACCGCTTTTCTAGGCAACCCTCTCTTATGCGGCTTTCCGCTTCAGAAATCATGCAAAGACCCGGCTCCGAGCTCTCCGGGTACTGACCCGAACTCCTCGCCCGGATCCGATAACCCGAAAAAGGGGCTCAGCCCGGGTCTAATCATCCTCATCTCCGTAGCCGACGCCGCCGCGGTCGCGTTCATCGGTTTGATCGCACTCTACATCTACTGGAAAAGGAAAGACAACTCCAACGGCTGCTCATGCACCGGGAAGAGAAAGCTCGGCGCGAGCAATGATAGACAAAGCCGGCTCTGTTGCTCCTGCATCAGCGGCGGGTTCGGGAACTCGGACTCCGAACCCGACCCGGAACGACCCGCCGAGAGGGGAAAAGGCGAGGGAGAGCTTGTGGCGATTGACAAGGGGTTCACATTTGAGCTGGACGAGCTGCTGAGAGCTTCGGCGTACGTGTTGGGGAAGAGTGGGTTGGGGATAGTGTATAAGGTGGTGCTTGGGAATGGGATTCCGGTGGCGGTGAGGAGGCTCGGGGAGGGAGGGGATCAGAGGTATAAGGAGTTCGCGGCGGAGGTGCAGGCCATTGGGAGAGTGAAGCATCCGAATGTGGTGAGGCTGAGGGCGTACTATTGGGCGCCCGACGAGAAGCTTCTCATCAGTGATTTCATTTCTCATGGGAACTTGGCCTCTGCGATCCGCGGGAGAAATGGTCAGCCTATAAGCCTCTCATGGTCGACAAGGCTGAAGATCTTAAAGGGAACAGCGCGAGGCTTAGCCTATCTCCACGAATGTAGTCCTCGGAAATTTGTCCATGGGGACATCAAGCCCTCCAACATTCTCCTAGACAACGAATCTCAACCCTACATTTCGGATTTCGGACTCAACAGACTGATCACCATCACTGGCAACAACCCTTCCTCGGGTGGCTTAATGGGTAGTGCTCTCCCTTACATGAAGGCTGTCCAAACAGAGCGAGCCAACAACTACAGAGCCCCTGAGGCTAGAGTGTCGGGTAGTAGACCAACTCAAAAATGGGATGTTTACTCATTCGGAGTTGTCTTGCTGGAGTTGCTCACCGGAAAGTCTCCGGAGATGTCTCCAACTAGTACCTCAACTTCCATGGAGATACCGGACTTAGTGAGGTGGGTGAGGAAAGGATTTGAGGATGAAAACCCTCTTTCGGATATGGTAGACCCTATTTTGCTTCAAGAAGTCCATGCCAAAAAGGAAGTGCTAGCAGCTTTTCATGTAGCACTTGCTTGCACTGAGCCTGATCCTGAGGTTAGGCCTAGGATGAAAACCGTCTCCGAGAATCTTGAAAGGGTTGGATCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

709

Amino Acids

76.52

Weight (kDa)

7.51

Isoelectric Point (pI)

35.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 24 - 60 3.3e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 66 - 173 1.5e-06 Leucine-rich repeat region
LRR_At5g56370 PF24758 99 - 176 5.7e-06 FBD-associated F-box protein At5g56370, LRR repeats
LRR_8 PF13855 141 - 201 2.8e-08 Leucine rich repeat
Pkinase PF00069 416 - 500 2.7e-06 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 417 - 498 9.6e-07 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0010877)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G67510
fragaria_vesca FvH4_4g24010 FvH4_4g24010 FvH4_4g24010
malus_domestica MD13G1116600.v1.1 MD16G1117000.v1.1
prunus_persica Prupe.1G229200_v2.0.a1
pyrus_communis pycom13g10120 pycom16g10010
rosa_chinensis RchiOBHm_Chr4g0430671
rosa_laevigata RLG00000006957
rosa_multiflora Rmu_sc0000131.1_g000012 Rmu_sc0023719.1_g000001
rosa_roxburghii Rroxscaffold_5G00372410
rosa_rugosa Rorug04G0245100
rosa_samantha Rh4AG301200 Rh4BG308300 Rh4CG325500 Rh4DG305900
rosa_wichuraiana Rw4G026150

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 209
AccB1I GGYRCC 1 cut(s) 1426
AccI GTMKAC 5 cut(s) 108, 279, 1526, 1810, 1983
AccII CGCG 8 cut(s) 210, 246, 971, 977, 1067, 1358, 1491, 1558
AccIII TCCGGA 1 cut(s) 1879
AclWI GGATC 8 cut(s) 227, 505, 610, 897, 910, 1344, 1480, 2060
AcoI YGGCCR 3 cut(s) 391, 546, 621
AcsI RAATTY 3 cut(s) 527, 540, 1595
AcuI CTGAAG 4 cut(s) 659, 736, 824, 1556
AcyI GRCGYC 3 cut(s) 147, 963, 1427
AfaI GTAC 5 cut(s) 671, 880, 1244, 1418, 1900
AflIII ACRYGT 1 cut(s) 1245
AgeI ACCGGT 1 cut(s) 715
AgsI TTSAA 4 cut(s) 343, 484, 2000, 2111
AhdI GACNNNNNGTC 1 cut(s) 640
AhlI ACTAGT 1 cut(s) 1895
AjiI CACGTC 1 cut(s) 351
AjuI GAANNNNNNNTTGG 2 cut(s) 1247, 1279
AloI GAACNNNNNNTCC 2 cut(s) 1115, 1147
Alw21I GWGCWC 3 cut(s) 267, 872, 1735
Alw26I GTCTC 4 cut(s) 499, 1881, 1893, 2101
AlwI GGATC 8 cut(s) 227, 505, 610, 897, 910, 1344, 1480, 2060
AlwNI CAGNNNCTG 1 cut(s) 508
Ama87I CYCGRG 3 cut(s) 931, 1322, 1711
Aor13HI TCCGGA 1 cut(s) 1879
AoxI GGCC 8 cut(s) 76, 391, 546, 621, 793, 1371, 1476, 2078
ApeKI GCWGC 5 cut(s) 496, 499, 1035, 1225, 2030
ApoI RAATTY 3 cut(s) 527, 540, 1595
ArsI GACNNNNNNTTYG 2 cut(s) 90, 122
AsiGI ACCGGT 1 cut(s) 715
AspA2I CCTAGG 1 cut(s) 2081
AspLEI GCGC 3 cut(s) 1067, 1429, 1558
AspS9I GGNCC 4 cut(s) 165, 558, 611, 794
AsuC2I CCSGG 9 cut(s) 550, 620, 860, 876, 900, 932, 933, 1048, 1145
AsuHPI GGTGA 7 cut(s) 181, 730, 1324, 1414, 1678, 1858, 1951
AsuII TTCGAA 1 cut(s) 785
AsuNHI GCTAGC 1 cut(s) 2026
AvaI CYCGRG 3 cut(s) 931, 1322, 1711
AvaII GGWCC 3 cut(s) 165, 558, 611
AvrII CCTAGG 1 cut(s) 2081
AxyI CCTNAGG 2 cut(s) 1788, 2070
BamHI GGATCC 1 cut(s) 902
BanI GGYRCC 1 cut(s) 1426
BanII GRGCYC 4 cut(s) 267, 872, 927, 1786
BarI GAAGNNNNNNTAC 2 cut(s) 1891, 1923
BbsI GAAGAC 1 cut(s) 472
Bbv12I GWGCWC 3 cut(s) 267, 872, 1735
BbvCI CCTCAGC 1 cut(s) 1409
BbvI GCAGC 5 cut(s) 486, 508, 1022, 1212, 2042
BccI CCATC 4 cut(s) 156, 332, 416, 1697
BceAI ACGGC 6 cut(s) 89, 91, 139, 334, 388, 1048
BclI TGATCA 1 cut(s) 1683
BcnI CCSGG 9 cut(s) 550, 620, 860, 876, 900, 932, 933, 1048, 1145
BcoDI GTCTC 4 cut(s) 499, 1881, 1893, 2101
BcuI ACTAGT 1 cut(s) 1895
BfaI CTAG 6 cut(s) 809, 1634, 1794, 1896, 2027, 2082
BfmI CTRYAG 2 cut(s) 500, 1777
BfoI RGCGCY 1 cut(s) 1430
BglI GCCNNNNNGGC 1 cut(s) 1790
BglII AGATCT 1 cut(s) 1539
BlnI CCTAGG 1 cut(s) 2081
BlpI GCTNAGC 2 cut(s) 926, 1564
Bme1390I CCNGG 9 cut(s) 550, 620, 860, 876, 900, 932, 933, 1048, 1145
Bme18I GGWCC 3 cut(s) 165, 558, 611
BmeRI GACNNNNNGTC 1 cut(s) 640
BmeT110I CYCGRG 3 cut(s) 931, 1322, 1711
BmgBI CACGTC 1 cut(s) 351
BmgT120I GGNCC 4 cut(s) 165, 558, 611, 794
BmiI GGNNCC 4 cut(s) 322, 864, 904, 1428
BmrFI CCNGG 9 cut(s) 550, 620, 860, 876, 900, 932, 933, 1048, 1145
BmsI GCATC 2 cut(s) 1113, 1399
BmtI GCTAGC 1 cut(s) 2030
BpiI GAAGAC 1 cut(s) 472
BpmI CTGGAG 4 cut(s) 154, 413, 563, 1877
Bpu10I CCTNAGC 1 cut(s) 1409
Bpu1102I GCTNAGC 2 cut(s) 926, 1564
Bpu14I TTCGAA 1 cut(s) 785
BpuMI CCSGG 9 cut(s) 550, 620, 860, 876, 900, 932, 933, 1048, 1145
BsaAI YACGTR 1 cut(s) 1246
BsaBI GATNNNNATC 1 cut(s) 1688
BsaHI GRCGYC 3 cut(s) 147, 963, 1427
BsaWI WCCGGW 5 cut(s) 715, 1303, 1868, 1879, 1921
Bse118I RCCGGY 4 cut(s) 167, 191, 715, 1086
Bse1I ACTGG 3 cut(s) 137, 1013, 1699
Bse21I CCTNAGG 2 cut(s) 1788, 2070
Bse3DI GCAATG 1 cut(s) 1078
Bse8I GATNNNNATC 1 cut(s) 1688
BseAI TCCGGA 1 cut(s) 1879
BseGI GGATG 7 cut(s) 252, 324, 942, 1390, 1834, 1963, 2091
BseJI GATNNNNATC 1 cut(s) 1688
BseMI GCAATG 1 cut(s) 1078
BseMII CTCAG 7 cut(s) 347, 940, 1220, 1400, 1779, 2049, 2061
BseNI ACTGG 3 cut(s) 137, 1013, 1699
BseRI GAGGAG 6 cut(s) 77, 103, 106, 566, 883, 1330
BseX3I CGGCCG 2 cut(s) 546, 621
BseXI GCAGC 5 cut(s) 486, 508, 1022, 1212, 2042
BseYI CCCAGC 1 cut(s) 703
BsgI GTGCAG 1 cut(s) 1388
Bsh1236I CGCG 8 cut(s) 210, 246, 971, 977, 1067, 1358, 1491, 1558
Bsh1285I CGRYCG 3 cut(s) 549, 624, 975
BshFI GGCC 8 cut(s) 78, 393, 548, 623, 795, 1373, 1478, 2080
BshNI GGYRCC 1 cut(s) 1426
BshTI ACCGGT 1 cut(s) 715
BsiEI CGRYCG 3 cut(s) 549, 624, 975
BsiHKAI GWGCWC 3 cut(s) 267, 872, 1735
BsiHKCI CYCGRG 3 cut(s) 931, 1322, 1711
BsiWI CGTACG 1 cut(s) 1242
BslFI GGGAC 1 cut(s) 1622
BsmAI GTCTC 4 cut(s) 499, 1881, 1893, 2101
BsmBI CGTCTC 1 cut(s) 2101
BsmFI GGGAC 1 cut(s) 1622
BsmI GAATGC 1 cut(s) 122
BsnI GGCC 8 cut(s) 78, 393, 548, 623, 795, 1373, 1478, 2080
BsoBI CYCGRG 3 cut(s) 931, 1322, 1711
Bsp119I TTCGAA 1 cut(s) 785
Bsp1286I GDGCHC 5 cut(s) 267, 872, 927, 1735, 1786
Bsp13I TCCGGA 1 cut(s) 1879
Bsp1720I GCTNAGC 2 cut(s) 926, 1564
Bsp19I CCATGG 2 cut(s) 1603, 1911
BspANI GGCC 8 cut(s) 78, 393, 548, 623, 795, 1373, 1478, 2080
BspCNI CTCAG 7 cut(s) 346, 939, 1221, 1401, 1780, 2050, 2062
BspEI TCCGGA 1 cut(s) 1879
BspFNI CGCG 8 cut(s) 210, 246, 971, 977, 1067, 1358, 1491, 1558
BspHI TCATGA 1 cut(s) 2123
BspLI GGNNCC 4 cut(s) 322, 864, 904, 1428
BspMAI CTGCAG 1 cut(s) 504
BspOI GCTAGC 1 cut(s) 2030
BspPI GGATC 8 cut(s) 227, 505, 610, 897, 910, 1344, 1480, 2060
BspQI GCTCTTC 1 cut(s) 344
BspT104I TTCGAA 1 cut(s) 785
BspT107I GGYRCC 1 cut(s) 1426
BsrDI GCAATG 1 cut(s) 1078
BsrFI RCCGGY 4 cut(s) 167, 191, 715, 1086
BsrI ACTGG 3 cut(s) 137, 1013, 1699
BssAI RCCGGY 4 cut(s) 167, 191, 715, 1086
BssNI GRCGYC 3 cut(s) 147, 963, 1427
BssT1I CCWWGG 3 cut(s) 1603, 1911, 2081
Bst4CI ACNGT 5 cut(s) 377, 478, 491, 724, 2095
Bst6I CTCTTC 5 cut(s) 26, 344, 371, 1046, 1250
BstACI GRCGYC 3 cut(s) 147, 963, 1427
BstAPI GCANNNNNTGC 1 cut(s) 177
BstBAI YACGTR 1 cut(s) 1246
BstBI TTCGAA 1 cut(s) 785
BstC8I GCNNGC 8 cut(s) 395, 656, 1069, 1088, 1371, 1767, 2028, 2053
BstDSI CCRYGG 6 cut(s) 244, 316, 969, 1489, 1603, 1911
BstF5I GGATG 7 cut(s) 252, 324, 942, 1390, 1834, 1963, 2091
BstFNI CGCG 8 cut(s) 210, 246, 971, 977, 1067, 1358, 1491, 1558
BstH2I RGCGCY 1 cut(s) 1430
BstHHI GCGC 3 cut(s) 1067, 1429, 1558
BstMAI GTCTC 4 cut(s) 499, 1881, 1893, 2101
BstMCI CGRYCG 3 cut(s) 549, 624, 975
BstMWI GCNNNNNNNGC 8 cut(s) 177, 965, 974, 1041, 1110, 1222, 1790, 1861
BstSCI CCNGG 9 cut(s) 548, 618, 858, 874, 898, 930, 931, 1046, 1143
BstSFI CTRYAG 2 cut(s) 500, 1777
BstUI CGCG 8 cut(s) 210, 246, 971, 977, 1067, 1358, 1491, 1558
BstV1I GCAGC 5 cut(s) 486, 508, 1022, 1212, 2042
BstV2I GAAGAC 1 cut(s) 472
BstX2I RGATCY 2 cut(s) 902, 1539
BstYI RGATCY 2 cut(s) 902, 1539
BstZI CGGCCG 2 cut(s) 546, 621
Bsu36I CCTNAGG 2 cut(s) 1788, 2070
BsuRI GGCC 8 cut(s) 78, 393, 548, 623, 795, 1373, 1478, 2080
BtgI CCRYGG 6 cut(s) 244, 316, 969, 1489, 1603, 1911
BtrI CACGTC 1 cut(s) 351
BtsCI GGATG 7 cut(s) 252, 324, 942, 1390, 1834, 1963, 2091
BtsIMutI CAGTG 3 cut(s) 1456, 1692, 2055
Cac8I GCNNGC 8 cut(s) 395, 656, 1069, 1088, 1371, 1767, 2028, 2053
CaiI CAGNNNCTG 1 cut(s) 508
CciI TCATGA 1 cut(s) 2123
CfoI GCGC 3 cut(s) 1067, 1429, 1558
Cfr10I RCCGGY 4 cut(s) 167, 191, 715, 1086
Cfr13I GGNCC 4 cut(s) 165, 558, 611, 794
Cfr42I CCGCGG 3 cut(s) 247, 972, 1492
Cfr9I CCCGGG 1 cut(s) 931
CpoI CGGWCCG 1 cut(s) 611
CseI GACGC 3 cut(s) 155, 199, 971
Csp6I GTAC 5 cut(s) 670, 879, 1243, 1417, 1899
CspAI ACCGGT 1 cut(s) 715
CspI CGGWCCG 1 cut(s) 611
CviQI GTAC 5 cut(s) 670, 879, 1243, 1417, 1899
DinI GGCGCC 1 cut(s) 1428
DrdI GACNNNNNNGTC 1 cut(s) 209
DriI GACNNNNNGTC 1 cut(s) 640
DseDI GACNNNNNNGTC 1 cut(s) 209
EaeI YGGCCR 3 cut(s) 391, 546, 621
EagI CGGCCG 2 cut(s) 546, 621
Eam1104I CTCTTC 5 cut(s) 26, 344, 371, 1046, 1250
Eam1105I GACNNNNNGTC 1 cut(s) 640
EarI CTCTTC 5 cut(s) 26, 344, 371, 1046, 1250
EciI GGCGGA 4 cut(s) 91, 275, 583, 1376
Ecl136II GAGCTC 2 cut(s) 265, 870
EclXI CGGCCG 2 cut(s) 546, 621
Eco130I CCWWGG 3 cut(s) 1603, 1911, 2081
Eco147I AGGCCT 1 cut(s) 2080
Eco24I GRGCYC 4 cut(s) 267, 872, 927, 1786
Eco47I GGWCC 3 cut(s) 165, 558, 611
Eco52I CGGCCG 2 cut(s) 546, 621
Eco53kI GAGCTC 2 cut(s) 265, 870
Eco57I CTGAAG 4 cut(s) 659, 736, 824, 1556
Eco81I CCTNAGG 2 cut(s) 1788, 2070
Eco88I CYCGRG 3 cut(s) 931, 1322, 1711
EcoICRI GAGCTC 2 cut(s) 265, 870
EcoT14I CCWWGG 3 cut(s) 1603, 1911, 2081
EcoT38I GRGCYC 4 cut(s) 267, 872, 927, 1786
EgeI GGCGCC 1 cut(s) 1428
EheI GGCGCC 1 cut(s) 1428
ErhI CCWWGG 3 cut(s) 1603, 1911, 2081
Esp3I CGTCTC 1 cut(s) 2101
FaqI GGGAC 1 cut(s) 1622
FauI CCCGC 6 cut(s) 215, 408, 431, 1106, 1162, 1484
FbaI TGATCA 1 cut(s) 1683
FblI GTMKAC 5 cut(s) 108, 279, 1526, 1810, 1983
FokI GGATG 7 cut(s) 239, 311, 929, 1377, 1841, 1970, 2098
FriOI GRGCYC 4 cut(s) 267, 872, 927, 1786
FspBI CTAG 6 cut(s) 809, 1634, 1794, 1896, 2027, 2082
GlaI GCGC 3 cut(s) 1066, 1428, 1557
GsaI CCCAGC 1 cut(s) 707
GsuI CTGGAG 4 cut(s) 154, 413, 563, 1877
HaeII RGCGCY 1 cut(s) 1430
HaeIII GGCC 8 cut(s) 78, 393, 548, 623, 795, 1373, 1478, 2080
HgaI GACGC 3 cut(s) 155, 199, 971
HhaI GCGC 3 cut(s) 1067, 1429, 1558
Hin1I GRCGYC 3 cut(s) 147, 963, 1427
Hin6I GCGC 3 cut(s) 1065, 1427, 1556
HinP1I GCGC 3 cut(s) 1065, 1427, 1556
HincII GTYRAC 2 cut(s) 109, 1527
HindII GTYRAC 2 cut(s) 109, 1527
HindIII AAGCTT 1 cut(s) 1439
HphI GGTGA 7 cut(s) 181, 730, 1324, 1414, 1678, 1858, 1951
Hpy166II GTNNAC 7 cut(s) 109, 280, 1206, 1527, 1811, 1834, 1984
Hpy188III TCNNGA 8 cut(s) 217, 430, 1120, 1880, 2000, 2069, 2108, 2124
Hpy8I GTNNAC 7 cut(s) 109, 280, 1206, 1527, 1811, 1834, 1984
Hpy99I CGWCG 7 cut(s) 77, 110, 149, 215, 218, 965, 1436
HpyAV CCTTC 3 cut(s) 613, 1716, 1741
HpyCH4III ACNGT 5 cut(s) 377, 478, 491, 724, 2095
HpyCH4IV ACGT 2 cut(s) 350, 1245
HpyCH4V TGCA 8 cut(s) 180, 414, 502, 852, 1044, 1104, 1369, 2055
HpyF10VI GCNNNNNNNGC 8 cut(s) 177, 965, 974, 1041, 1110, 1222, 1790, 1861
HpySE526I ACGT 2 cut(s) 350, 1245
Hsp92I GRCGYC 3 cut(s) 147, 963, 1427
HspAI GCGC 3 cut(s) 1065, 1427, 1556
KasI GGCGCC 1 cut(s) 1426
Kpn2I TCCGGA 1 cut(s) 1879
KroI GCCGGC 1 cut(s) 1086
KroNI GCCGGC 1 cut(s) 1088
Ksp22I TGATCA 1 cut(s) 1683
KspI CCGCGG 3 cut(s) 247, 972, 1492
LguI GCTCTTC 1 cut(s) 344
LmnI GCTCC 5 cut(s) 135, 326, 402, 868, 1103
Lsp1109I GCAGC 5 cut(s) 486, 508, 1022, 1212, 2042
LweI GCATC 2 cut(s) 1113, 1399
MaeI CTAG 6 cut(s) 809, 1634, 1794, 1896, 2027, 2082
MaeII ACGT 2 cut(s) 350, 1245
MaeIII GTNAC 4 cut(s) 351, 377, 718, 740
MboII GAAGA 8 cut(s) 13, 16, 331, 358, 472, 1063, 1267, 1549
MflI RGATCY 2 cut(s) 902, 1539
MhlI GDGCHC 5 cut(s) 267, 872, 927, 1735, 1786
MluCI AATT 3 cut(s) 527, 540, 1595
Mly113I GGCGCC 1 cut(s) 1427
MlyI GAGTC 4 cut(s) 104, 134, 1124, 1665
MmeI TCCRAC 7 cut(s) 153, 168, 471, 1053, 1647, 1916, 2098
MroI TCCGGA 1 cut(s) 1879
MroNI GCCGGC 1 cut(s) 1086
MseI TTAA 2 cut(s) 1544, 1721
MslI CAYNNNNRTG 1 cut(s) 1395
MspA1I CMGCKG 6 cut(s) 246, 499, 756, 971, 1110, 1491
MspR9I CCNGG 9 cut(s) 550, 620, 860, 876, 900, 932, 933, 1048, 1145
Mva1269I GAATGC 1 cut(s) 122
MvnI CGCG 8 cut(s) 210, 246, 971, 977, 1067, 1358, 1491, 1558
MwoI GCNNNNNNNGC 8 cut(s) 177, 965, 974, 1041, 1110, 1222, 1790, 1861
NaeI GCCGGC 1 cut(s) 1088
NarI GGCGCC 1 cut(s) 1427
NciI CCSGG 9 cut(s) 550, 620, 860, 876, 900, 932, 933, 1048, 1145
NcoI CCATGG 2 cut(s) 1603, 1911
NgoMIV GCCGGC 1 cut(s) 1086
NheI GCTAGC 1 cut(s) 2026
NlaIV GGNNCC 4 cut(s) 322, 864, 904, 1428
NmeAIII GCCGAG 4 cut(s) 246, 609, 1041, 1183
NmuCI GTSAC 3 cut(s) 351, 718, 740
NspV TTCGAA 1 cut(s) 785
PagI TCATGA 1 cut(s) 2123
PceI AGGCCT 1 cut(s) 2080
PciSI GCTCTTC 1 cut(s) 344
PctI GAATGC 1 cut(s) 122
PdiI GCCGGC 1 cut(s) 1088
PfeI GAWTC 7 cut(s) 8, 571, 691, 787, 1300, 1643, 2104
Pfl23II CGTACG 1 cut(s) 1242
PflFI GACNNNGTC 1 cut(s) 476
PinAI ACCGGT 1 cut(s) 715
PleI GAGTC 4 cut(s) 104, 134, 1124, 1665
PluTI GGCGCC 1 cut(s) 1430
PpsI GAGTC 4 cut(s) 104, 134, 1124, 1665
Ppu21I YACGTR 1 cut(s) 1246
Psp124BI GAGCTC 2 cut(s) 267, 872
PspFI CCCAGC 1 cut(s) 703
PspLI CGTACG 1 cut(s) 1242
PspN4I GGNNCC 4 cut(s) 322, 864, 904, 1428
PspPI GGNCC 4 cut(s) 165, 558, 611, 794
PsrI GAACNNNNNNTAC 2 cut(s) 1337, 1369
PstI CTGCAG 1 cut(s) 504
PstNI CAGNNNCTG 1 cut(s) 508
PsuI RGATCY 2 cut(s) 902, 1539
PsyI GACNNNGTC 1 cut(s) 476
PvuII CAGCTG 1 cut(s) 499
RsaI GTAC 5 cut(s) 671, 880, 1244, 1418, 1900
RsaNI GTAC 5 cut(s) 670, 879, 1243, 1417, 1899
RseI CAYNNNNRTG 1 cut(s) 1395
Rsr2I CGGWCCG 1 cut(s) 611
RsrII CGGWCCG 1 cut(s) 611
SacI GAGCTC 2 cut(s) 267, 872
SacII CCGCGG 3 cut(s) 247, 972, 1492
SalI GTCGAC 2 cut(s) 107, 1525
SapI GCTCTTC 1 cut(s) 344
SaqAI TTAA 2 cut(s) 1544, 1721
Sau96I GGNCC 4 cut(s) 165, 558, 611, 794
SchI GAGTC 4 cut(s) 104, 134, 1124, 1665
ScrFI CCNGG 9 cut(s) 550, 620, 860, 876, 900, 932, 933, 1048, 1145
SduI GDGCHC 5 cut(s) 267, 872, 927, 1735, 1786
SfaNI GCATC 2 cut(s) 1113, 1399
SfcI CTRYAG 2 cut(s) 500, 1777
SfoI GGCGCC 1 cut(s) 1428
Sfr303I CCGCGG 3 cut(s) 247, 972, 1492
SfuI TTCGAA 1 cut(s) 785
SgrBI CCGCGG 3 cut(s) 247, 972, 1492
SinI GGWCC 3 cut(s) 165, 558, 611
SmaI CCCGGG 1 cut(s) 933
SmiMI CAYNNNNRTG 1 cut(s) 1395
SpeI ACTAGT 1 cut(s) 1895
Sse9I AATT 3 cut(s) 527, 540, 1595
SseBI AGGCCT 1 cut(s) 2080
SspDI GGCGCC 1 cut(s) 1426
SspMI CTAG 6 cut(s) 809, 1634, 1794, 1896, 2027, 2082
SstI GAGCTC 2 cut(s) 267, 872
StuI AGGCCT 1 cut(s) 2080
StyD4I CCNGG 9 cut(s) 548, 618, 858, 874, 898, 930, 931, 1046, 1143
StyI CCWWGG 3 cut(s) 1603, 1911, 2081
TaaI ACNGT 5 cut(s) 377, 478, 491, 724, 2095
TaiI ACGT 2 cut(s) 353, 1248
TaqI TCGA 6 cut(s) 108, 438, 585, 732, 785, 1526
TaqII GACCGA 1 cut(s) 628
TasI AATT 3 cut(s) 527, 540, 1595
TauI GCSGC 8 cut(s) 249, 291, 759, 831, 968, 971, 1113, 1361
TfiI GAWTC 7 cut(s) 8, 571, 691, 787, 1300, 1643, 2104
Tru1I TTAA 2 cut(s) 1544, 1721
Tru9I TTAA 2 cut(s) 1544, 1721
TscAI CASTG 3 cut(s) 1456, 1699, 2062
TseFI GTSAC 3 cut(s) 351, 718, 740
TseI GCWGC 5 cut(s) 496, 499, 1035, 1225, 2030
Tsp45I GTSAC 3 cut(s) 351, 718, 740
TspDTI ATGAA 9 cut(s) 17, 34, 197, 970, 1447, 1760, 1974, 2027, 2102
TspGWI ACGGA 2 cut(s) 728, 943
TspMI CCCGGG 1 cut(s) 931
TspRI CASTG 3 cut(s) 1456, 1699, 2062
Tth111I GACNNNGTC 1 cut(s) 476
VpaK11BI GGWCC 3 cut(s) 165, 558, 611
XapI RAATTY 3 cut(s) 527, 540, 1595
XcmI CCANNNNNNNNNTGG 1 cut(s) 1821
XmaI CCCGGG 1 cut(s) 931
XmaJI CCTAGG 1 cut(s) 2081
XmiI GTMKAC 5 cut(s) 108, 279, 1526, 1810, 1983
XspI CTAG 6 cut(s) 809, 1634, 1794, 1896, 2027, 2082
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.