RchiOBHm_Chr4g0430671
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
OG0010877
Physical Location & Seq
Reverse (-)
55136752 .. 55141143
4392 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ39939

Sequence Viewer

Length: 2133 bp
ATGAAGGATTCCATTATTTACTCACTCTTCTTCTTCTTCTTCTTCTTCTGTTTTGGCGACTTCGCTGACTCTTTGACTCCCGACGGCCTCTCCCTCCTCTCCCTCAAATCCGCCGTCGACCAGTCCACCGCCGGCTCCGCCTTCTCCGACTGGGCCGACTCCGACGCCTCGCCCTGCCGATGGACCGGCATTTCCTGCATGAACATCACCGGATTCCCCGACCCCCGCGTCGTCGGGATCGCGCTCTCCGGCAAGAATCTCCGGGGCTACATCCCCTCCGAGCTCGGAAACTTAGTCTATCTGCGGCGGCTCAACCTCCACAGCAACAACTTCTACGGCGCCATACCGACTCAGCTCTTCAATGCCACGTCACTCCACAGCCTCTTCCTCTACGGTAACAACCTCTCCGGTCAGCTCCCGCCGTCGATCTGTAACCTCCCGCGCCTCCAGAACCTCGACCTCTCCAACAACTCCCTCTCCGGTTCGTTAGACAAGGGCCTCAACAACTGTAAGCAATTGCAGAGACTGATACTCGCCGGAAACCATTTCACCGGCGAAATCCCGGCCGGAATTTGGTCCGGTATGGAAAACCTCCTCCAATTGGACCTCTCCGACAACGTTTTCACCGGATCGGTGCCGGAAGATTTCGGCGACCTGAAGTCTCTCTCCGGCACGCTCAACCTCTCGTTCAATCACTTATCCGGCGGGATTCCGAAATCGCTGGGAGACTTACCGGTGACGGTGAGCTTCGATCTCCGCAACAATAATTTCAGCGGCGAAATTCCCCAAACGGGGTCGTTTTCGAACCAGGGCCCGACCGCGTTTCTCAACAACCCTCTCTTATGCGGGTTTCCGCTCCAGAAATCTTGCAAAAACCAGGCCCCGAGTTCCCCGGGTAACCCGAATTCCTCTCCCGGATCCGATAACAACCCGAAAAAGGGGTTGAGTCCGGGTCTGATCATCCTCATCTCCGTAGCCGACGCCGCCGCAGTCGCATTCATCGGTTTGGTCGTAGTTTACATTTACTGGAAAAAGAAGGACAATGCCAACGGCTGTTCATGTACCGGAAAGACAAAATTCGGCGCGAACACCGAGAAAAGCCGACTCTGTTGTTCTTGCATCAACGGCGGGTTCGGGAACTCGGACTCCGAACTCGACCCGCCCGAGAGAGGAAGAGGCGAAGGAGAGCTTGTGGCAATCGATAAGGGGTTCACATTTGAACTCGACGAGCTGCTGAGAGCGTCGGCTTATGTTCTGGGGAAGAGTGGGTTGGGGATTGTGTACAAGGTGGTGCTGGGGAATGGGATCCCGGTGGCGGTGAGGAGGTTGGGGGAGGGCGGAGATCAGAGGTACAAGGAGTTCGCGGCGGAGGTTCAGGCGATCGGTAGAGTGAAGCATCCGAACGTGGTGAGGCTGAGGGCGTACTATTGGGCCCCCGACGAGAAGCTCTTGATCAGTGATTTTATTTCGCATGGGAACTTGGCTTCTGCGATTCGCGGGAGAAATGGTCAGCCTATAAGCCTCTCATGGTCAACGAGGCTGAAGATCTTAAAGGGAACAGCGCGAGGCTTGGCCTATCTCCACGAATGCAGCCCCCGAAAATTTGTCCATGGAGACATCAAACCTTCCAACATTCTACTCGACAACGAATCTCAACCCTACATTTCGGATTTCGGACTCAACAGACTGATCACCATAACTGGCAACAACCCCTCCTCGGGTGGCTTGATGGGTAGCGCTCTCCCTTACATGAAGTCTAGCCAAACGGAGCGAGCCAACAACTACAGAGCTCCGGAGGCTAGAGTCCAGGGTAATAAACCAACTCAAAAATGGGATGTTTATTCATTCGGAGTTGTCCTGCTGGAGTTGCTCACAGGAAAGTCTCCAGAGCTATCTCCAACTAGTACCTCAACTTCCCTAGAGATACCGGACTTAGTGAGGTGGGTGAGGAAAGGATTTGAGGATGAAAACCCTCTTTCGGATATGGTAGACCCTGTGTTGCTTCAAGAAGTTCATGCCAAAAAGGAAGTGCTAGCAGCTTTTCATGTAGCACTTGCTTGTACTGAGCCTGATCCTGAGGTTAGGCCGAGGATGAAAACTGTCTCCGAGAATCTCGAAAGGGTTGGATCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

710

Amino Acids

76.91

Weight (kDa)

7.1

Isoelectric Point (pI)

32.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 27 - 66 8.5e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 69 - 177 5.6e-07 Leucine-rich repeat region
LRR_8 PF13855 101 - 159 2.2e-06 Leucine rich repeat
LRR_8 PF13855 172 - 233 1.7e-08 Leucine rich repeat
Pkinase PF00069 418 - 648 3.4e-32 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 419 - 705 3.1e-29 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0010877)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G67510
fragaria_vesca FvH4_4g24010 FvH4_4g24010 FvH4_4g24010
malus_domestica MD13G1116600.v1.1 MD16G1117000.v1.1
prunus_persica Prupe.1G229200_v2.0.a1
pyrus_communis pycom13g10120 pycom16g10010
rosa_chinensis RchiOBHm_Chr4g0430671
rosa_laevigata RLG00000006957
rosa_multiflora Rmu_sc0000131.1_g000012 Rmu_sc0023719.1_g000001
rosa_roxburghii Rroxscaffold_5G00372410
rosa_rugosa Rorug04G0245100
rosa_samantha Rh4AG301200 Rh4BG308300 Rh4CG325500 Rh4DG305900
rosa_wichuraiana Rw4G026150

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 227
AccB1I GGYRCC 2 cut(s) 338, 634
AccBSI CCGCTC 1 cut(s) 856
AccI GTMKAC 2 cut(s) 117, 1989
AccII CGCG 8 cut(s) 228, 242, 442, 821, 1085, 1364, 1497, 1564
AccIII TCCGGA 1 cut(s) 1792
AclI AACGTT 1 cut(s) 618
AclWI GGATC 7 cut(s) 245, 637, 912, 925, 1300, 1313, 2066
AcoI YGGCCR 1 cut(s) 564
AcsI RAATTY 5 cut(s) 570, 780, 904, 1076, 1601
AcuI CTGAAG 2 cut(s) 677, 1562
AcyI GRCGYC 3 cut(s) 165, 339, 981
AfaI GTAC 6 cut(s) 1063, 1283, 1352, 1424, 1906, 2062
AfeI AGCGCT 1 cut(s) 1738
AgeI ACCGGT 1 cut(s) 733
AgsI TTSAA 4 cut(s) 361, 691, 1220, 2006
AhdI GACNNNNNGTC 1 cut(s) 658
AhlI ACTAGT 1 cut(s) 1901
AjiI CACGTC 1 cut(s) 369
AjnI CCWGG 3 cut(s) 807, 876, 1806
AjuI GAANNNNNNNTTGG 2 cut(s) 1253, 1285
AloI GAACNNNNNNTCC 2 cut(s) 1130, 1162
Alw21I GWGCWC 2 cut(s) 285, 1792
Alw26I GTCTC 6 cut(s) 517, 666, 720, 1608, 1887, 2107
AlwI GGATC 7 cut(s) 245, 637, 912, 925, 1300, 1313, 2066
AlwNI CAGNNNCTG 1 cut(s) 526
Ama87I CYCGRG 4 cut(s) 883, 892, 1163, 1717
Aor13HI TCCGGA 1 cut(s) 1792
Aor51HI AGCGCT 1 cut(s) 1738
AoxI GGCC 9 cut(s) 85, 153, 496, 564, 811, 879, 1431, 1572, 2084
ApaI GGGCCC 2 cut(s) 815, 1435
ApeKI GCWGC 3 cut(s) 1231, 1590, 2036
ApoI RAATTY 5 cut(s) 570, 780, 904, 1076, 1601
ArsI GACNNNNNNTTYG 2 cut(s) 99, 131
AsiGI ACCGGT 1 cut(s) 733
AspLEI GCGC 6 cut(s) 244, 341, 444, 1085, 1564, 1739
AsuC2I CCSGG 7 cut(s) 263, 563, 893, 894, 915, 951, 1310
AsuHPI GGTGA 9 cut(s) 199, 541, 616, 748, 754, 1330, 1420, 1684, 1957
AsuII TTCGAA 1 cut(s) 803
AsuNHI GCTAGC 1 cut(s) 2032
AvaI CYCGRG 4 cut(s) 883, 892, 1163, 1717
AvaII GGWCC 3 cut(s) 183, 576, 604
AxyI CCTNAGG 1 cut(s) 2076
BaeGI GKGCMC 2 cut(s) 815, 1435
BamHI GGATCC 2 cut(s) 917, 1305
BanI GGYRCC 2 cut(s) 338, 634
BanII GRGCYC 4 cut(s) 285, 815, 1435, 1792
BarI GAAGNNNNNNTAC 2 cut(s) 1897, 1929
Bbv12I GWGCWC 2 cut(s) 285, 1792
BbvCI CCTCAGC 1 cut(s) 1415
BbvI GCAGC 3 cut(s) 1218, 1602, 2048
BccI CCATC 2 cut(s) 174, 1723
BceAI ACGGC 6 cut(s) 98, 100, 352, 406, 1066, 1141
BciT130I CCWGG 3 cut(s) 809, 878, 1808
BclI TGATCA 3 cut(s) 957, 1452, 1689
BcnI CCSGG 7 cut(s) 263, 563, 893, 894, 915, 951, 1310
BcoDI GTCTC 6 cut(s) 517, 666, 720, 1608, 1887, 2107
BcuI ACTAGT 1 cut(s) 1901
BfaI CTAG 5 cut(s) 1758, 1800, 1902, 1919, 2033
BfmI CTRYAG 1 cut(s) 1783
BfoI RGCGCY 2 cut(s) 342, 1740
BglII AGATCT 1 cut(s) 1545
BisI GCNGC 9 cut(s) 305, 308, 775, 984, 987, 1232, 1365, 1591, 2037
BlsI GCNGC 9 cut(s) 306, 309, 776, 985, 988, 1233, 1366, 1592, 2038
Bme18I GGWCC 3 cut(s) 183, 576, 604
BmeRI GACNNNNNGTC 1 cut(s) 658
BmeT110I CYCGRG 4 cut(s) 883, 892, 1163, 1717
BmgBI CACGTC 1 cut(s) 369
BmiI GGNNCC 9 cut(s) 136, 340, 636, 813, 882, 919, 1307, 1433, 1434
BmrI ACTGGG 1 cut(s) 160
BmsI GCATC 2 cut(s) 1128, 1405
BmtI GCTAGC 1 cut(s) 2036
BmuI ACTGGG 1 cut(s) 160
BpmI CTGGAG 4 cut(s) 431, 842, 1869, 1883
Bpu10I CCTNAGC 1 cut(s) 1415
Bpu14I TTCGAA 1 cut(s) 803
BpuMI CCSGG 7 cut(s) 263, 563, 893, 894, 915, 951, 1310
Bsa29I ATCGAT 1 cut(s) 1200
BsaHI GRCGYC 3 cut(s) 165, 339, 981
BsaJI CCNNGG 8 cut(s) 262, 808, 891, 892, 1609, 1716, 1807, 2087
BsaWI WCCGGW 9 cut(s) 209, 407, 479, 578, 626, 733, 1064, 1792, 1927
Bse118I RCCGGY 4 cut(s) 131, 185, 551, 733
Bse1I ACTGG 4 cut(s) 121, 155, 1031, 1705
Bse21I CCTNAGG 1 cut(s) 2076
BseAI TCCGGA 1 cut(s) 1792
BseBI CCWGG 3 cut(s) 809, 878, 1808
BseCI ATCGAT 1 cut(s) 1200
BseDI CCNNGG 8 cut(s) 262, 808, 891, 892, 1609, 1716, 1807, 2087
BseGI GGATG 6 cut(s) 270, 960, 1396, 1840, 1969, 2097
BseMII CTCAG 5 cut(s) 365, 1226, 1406, 2055, 2067
BseNI ACTGG 4 cut(s) 121, 155, 1031, 1705
BseRI GAGGAG 4 cut(s) 86, 584, 1336, 1705
BseSI GKGCMC 2 cut(s) 815, 1435
BseX3I CGGCCG 1 cut(s) 564
BseXI GCAGC 3 cut(s) 1218, 1602, 2048
BseYI CCCAGC 2 cut(s) 721, 1294
Bsh1236I CGCG 8 cut(s) 228, 242, 442, 821, 1085, 1364, 1497, 1564
Bsh1285I CGRYCG 3 cut(s) 567, 819, 1383
BshFI GGCC 9 cut(s) 87, 155, 498, 566, 813, 881, 1433, 1574, 2086
BshNI GGYRCC 2 cut(s) 338, 634
BshTI ACCGGT 1 cut(s) 733
BshVI ATCGAT 1 cut(s) 1200
BsiEI CGRYCG 3 cut(s) 567, 819, 1383
BsiHKAI GWGCWC 2 cut(s) 285, 1792
BsiHKCI CYCGRG 4 cut(s) 883, 892, 1163, 1717
BsmAI GTCTC 6 cut(s) 517, 666, 720, 1608, 1887, 2107
BsmI GAATGC 2 cut(s) 995, 1592
BsnI GGCC 9 cut(s) 87, 155, 498, 566, 813, 881, 1433, 1574, 2086
BsoBI CYCGRG 4 cut(s) 883, 892, 1163, 1717
Bsp119I TTCGAA 1 cut(s) 803
Bsp120I GGGCCC 2 cut(s) 811, 1431
Bsp1286I GDGCHC 4 cut(s) 285, 815, 1435, 1792
Bsp13I TCCGGA 1 cut(s) 1792
Bsp1407I TGTACA 1 cut(s) 1281
Bsp19I CCATGG 1 cut(s) 1609
BspANI GGCC 9 cut(s) 87, 155, 498, 566, 813, 881, 1433, 1574, 2086
BspCNI CTCAG 5 cut(s) 364, 1227, 1407, 2056, 2068
BspDI ATCGAT 1 cut(s) 1200
BspEI TCCGGA 1 cut(s) 1792
BspFNI CGCG 8 cut(s) 228, 242, 442, 821, 1085, 1364, 1497, 1564
BspHI TCATGA 1 cut(s) 2129
BspLI GGNNCC 9 cut(s) 136, 340, 636, 813, 882, 919, 1307, 1433, 1434
BspOI GCTAGC 1 cut(s) 2036
BspPI GGATC 7 cut(s) 245, 637, 912, 925, 1300, 1313, 2066
BspQI GCTCTTC 1 cut(s) 362
BspT104I TTCGAA 1 cut(s) 803
BspT107I GGYRCC 2 cut(s) 338, 634
BsrBI CCGCTC 1 cut(s) 856
BsrFI RCCGGY 4 cut(s) 131, 185, 551, 733
BsrGI TGTACA 1 cut(s) 1281
BsrI ACTGG 4 cut(s) 121, 155, 1031, 1705
BssAI RCCGGY 4 cut(s) 131, 185, 551, 733
BssECI CCNNGG 8 cut(s) 262, 808, 891, 892, 1609, 1716, 1807, 2087
BssNI GRCGYC 3 cut(s) 165, 339, 981
BssT1I CCWWGG 1 cut(s) 1609
Bst2UI CCWGG 3 cut(s) 809, 878, 1808
Bst4CI ACNGT 4 cut(s) 395, 509, 742, 2101
Bst6I CTCTTC 5 cut(s) 32, 362, 389, 1168, 1256
BstACI GRCGYC 3 cut(s) 165, 339, 981
BstAPI GCANNNNNTGC 1 cut(s) 195
BstAUI TGTACA 1 cut(s) 1281
BstBI TTCGAA 1 cut(s) 803
BstC8I GCNNGC 4 cut(s) 133, 674, 1773, 2034
BstDEI CTNAG 7 cut(s) 292, 351, 1235, 1415, 1933, 2064, 2076
BstDSI CCRYGG 1 cut(s) 1609
BstEII GGTNACC 1 cut(s) 896
BstF5I GGATG 6 cut(s) 270, 960, 1396, 1840, 1969, 2097
BstFNI CGCG 8 cut(s) 228, 242, 442, 821, 1085, 1364, 1497, 1564
BstH2I RGCGCY 2 cut(s) 342, 1740
BstHHI GCGC 6 cut(s) 244, 341, 444, 1085, 1564, 1739
BstMAI GTCTC 6 cut(s) 517, 666, 720, 1608, 1887, 2107
BstMCI CGRYCG 3 cut(s) 567, 819, 1383
BstMWI GCNNNNNNNGC 7 cut(s) 137, 195, 983, 992, 1125, 1796, 1867
BstNI CCWGG 3 cut(s) 809, 878, 1808
BstPI GGTNACC 1 cut(s) 896
BstSFI CTRYAG 1 cut(s) 1783
BstSLI GKGCMC 2 cut(s) 815, 1435
BstUI CGCG 8 cut(s) 228, 242, 442, 821, 1085, 1364, 1497, 1564
BstV1I GCAGC 3 cut(s) 1218, 1602, 2048
BstX2I RGATCY 3 cut(s) 917, 1305, 1545
BstYI RGATCY 3 cut(s) 917, 1305, 1545
BstZI CGGCCG 1 cut(s) 564
Bsu15I ATCGAT 1 cut(s) 1200
Bsu36I CCTNAGG 1 cut(s) 2076
BsuRI GGCC 9 cut(s) 87, 155, 498, 566, 813, 881, 1433, 1574, 2086
BsuTUI ATCGAT 1 cut(s) 1200
BtgI CCRYGG 1 cut(s) 1609
BtrI CACGTC 1 cut(s) 369
BtsCI GGATG 6 cut(s) 270, 960, 1396, 1840, 1969, 2097
BtsIMutI CAGTG 1 cut(s) 1462
Cac8I GCNNGC 4 cut(s) 133, 674, 1773, 2034
CaiI CAGNNNCTG 1 cut(s) 526
CciI TCATGA 1 cut(s) 2129
CfoI GCGC 6 cut(s) 244, 341, 444, 1085, 1564, 1739
Cfr10I RCCGGY 4 cut(s) 131, 185, 551, 733
Cfr9I CCCGGG 1 cut(s) 892
ClaI ATCGAT 1 cut(s) 1200
CseI GACGC 4 cut(s) 173, 217, 989, 1230
Csp6I GTAC 6 cut(s) 1062, 1282, 1351, 1423, 1905, 2061
CspAI ACCGGT 1 cut(s) 733
CviAII CATG 9 cut(s) 199, 1059, 1472, 1527, 1610, 1750, 2015, 2045, 2130
CviQI GTAC 6 cut(s) 1062, 1282, 1351, 1423, 1905, 2061
DdeI CTNAG 7 cut(s) 292, 351, 1235, 1415, 1933, 2064, 2076
DinI GGCGCC 1 cut(s) 340
DrdI GACNNNNNNGTC 1 cut(s) 227
DriI GACNNNNNGTC 1 cut(s) 658
DseDI GACNNNNNNGTC 1 cut(s) 227
EaeI YGGCCR 1 cut(s) 564
EagI CGGCCG 1 cut(s) 564
Eam1104I CTCTTC 5 cut(s) 32, 362, 389, 1168, 1256
Eam1105I GACNNNNNGTC 1 cut(s) 658
EarI CTCTTC 5 cut(s) 32, 362, 389, 1168, 1256
EciI GGCGGA 4 cut(s) 100, 127, 1353, 1382
Ecl136II GAGCTC 2 cut(s) 283, 1790
EclXI CGGCCG 1 cut(s) 564
Eco130I CCWWGG 1 cut(s) 1609
Eco24I GRGCYC 4 cut(s) 285, 815, 1435, 1792
Eco47I GGWCC 3 cut(s) 183, 576, 604
Eco47III AGCGCT 1 cut(s) 1738
Eco52I CGGCCG 1 cut(s) 564
Eco53kI GAGCTC 2 cut(s) 283, 1790
Eco57I CTGAAG 2 cut(s) 677, 1562
Eco81I CCTNAGG 1 cut(s) 2076
Eco88I CYCGRG 4 cut(s) 883, 892, 1163, 1717
Eco91I GGTNACC 1 cut(s) 896
EcoICRI GAGCTC 2 cut(s) 283, 1790
EcoO109I RGGNCCY 4 cut(s) 496, 811, 880, 1432
EcoO65I GGTNACC 1 cut(s) 896
EcoRI GAATTC 1 cut(s) 904
EcoRII CCWGG 3 cut(s) 807, 876, 1806
EcoT14I CCWWGG 1 cut(s) 1609
EcoT38I GRGCYC 4 cut(s) 285, 815, 1435, 1792
EgeI GGCGCC 1 cut(s) 340
EheI GGCGCC 1 cut(s) 340
ErhI CCWWGG 1 cut(s) 1609
FaeI CATG 9 cut(s) 202, 1062, 1475, 1530, 1613, 1753, 2018, 2048, 2133
FalI AAGNNNNNCTT 2 cut(s) 1173, 1205
FatI CATG 9 cut(s) 198, 1058, 1471, 1526, 1609, 1749, 2014, 2044, 2129
FauI CCCGC 8 cut(s) 233, 426, 447, 698, 839, 1121, 1167, 1490
FbaI TGATCA 3 cut(s) 957, 1452, 1689
FblI GTMKAC 2 cut(s) 117, 1989
Fnu4HI GCNGC 9 cut(s) 305, 308, 775, 984, 987, 1232, 1365, 1591, 2037
FokI GGATG 6 cut(s) 257, 947, 1383, 1847, 1976, 2104
FriOI GRGCYC 4 cut(s) 285, 815, 1435, 1792
Fsp4HI GCNGC 9 cut(s) 305, 308, 775, 984, 987, 1232, 1365, 1591, 2037
FspBI CTAG 5 cut(s) 1758, 1800, 1902, 1919, 2033
GlaI GCGC 6 cut(s) 243, 340, 443, 1084, 1563, 1738
GluI GCNGC 9 cut(s) 305, 308, 775, 984, 987, 1232, 1365, 1591, 2037
GsaI CCCAGC 2 cut(s) 725, 1298
GsuI CTGGAG 4 cut(s) 431, 842, 1869, 1883
HaeII RGCGCY 2 cut(s) 342, 1740
HaeIII GGCC 9 cut(s) 87, 155, 498, 566, 813, 881, 1433, 1574, 2086
HgaI GACGC 4 cut(s) 173, 217, 989, 1230
HhaI GCGC 6 cut(s) 244, 341, 444, 1085, 1564, 1739
Hin1I GRCGYC 3 cut(s) 165, 339, 981
Hin1II CATG 9 cut(s) 202, 1062, 1475, 1530, 1613, 1753, 2018, 2048, 2133
Hin6I GCGC 6 cut(s) 242, 339, 442, 1083, 1562, 1737
HinP1I GCGC 6 cut(s) 242, 339, 442, 1083, 1562, 1737
HincII GTYRAC 2 cut(s) 118, 1533
HindII GTYRAC 2 cut(s) 118, 1533
HphI GGTGA 9 cut(s) 199, 541, 616, 748, 754, 1330, 1420, 1684, 1957
Hpy166II GTNNAC 7 cut(s) 118, 126, 1018, 1212, 1282, 1533, 1990
Hpy8I GTNNAC 7 cut(s) 118, 126, 1018, 1212, 1282, 1533, 1990
HpyAV CCTTC 4 cut(s) 151, 1030, 1175, 1635
HpyCH4III ACNGT 4 cut(s) 395, 509, 742, 2101
HpyCH4IV ACGT 3 cut(s) 368, 618, 1404
HpyCH4V TGCA 5 cut(s) 198, 520, 870, 1119, 1590
HpyF10VI GCNNNNNNNGC 7 cut(s) 137, 195, 983, 992, 1125, 1796, 1867
HpyF3I CTNAG 7 cut(s) 292, 351, 1235, 1415, 1933, 2064, 2076
HpySE526I ACGT 3 cut(s) 368, 618, 1404
Hsp92I GRCGYC 3 cut(s) 165, 339, 981
Hsp92II CATG 9 cut(s) 202, 1062, 1475, 1530, 1613, 1753, 2018, 2048, 2133
HspAI GCGC 6 cut(s) 242, 339, 442, 1083, 1562, 1737
KasI GGCGCC 1 cut(s) 338
Kpn2I TCCGGA 1 cut(s) 1792
KroI GCCGGC 1 cut(s) 131
KroNI GCCGGC 1 cut(s) 133
Ksp22I TGATCA 3 cut(s) 957, 1452, 1689
LguI GCTCTTC 1 cut(s) 362
LmnI GCTCC 5 cut(s) 140, 420, 861, 1768, 1795
Lsp1109I GCAGC 3 cut(s) 1218, 1602, 2048
LweI GCATC 2 cut(s) 1128, 1405
MaeI CTAG 5 cut(s) 1758, 1800, 1902, 1919, 2033
MaeII ACGT 3 cut(s) 368, 618, 1404
MaeIII GTNAC 5 cut(s) 369, 395, 431, 736, 896
MbiI CCGCTC 1 cut(s) 856
MfeI CAATTG 2 cut(s) 515, 599
MflI RGATCY 3 cut(s) 917, 1305, 1545
MhlI GDGCHC 4 cut(s) 285, 815, 1435, 1792
MluCI AATT 8 cut(s) 515, 570, 599, 766, 780, 904, 1076, 1601
Mly113I GGCGCC 1 cut(s) 339
MlyI GAGTC 9 cut(s) 62, 70, 152, 343, 955, 1098, 1139, 1671, 1812
MmeI TCCRAC 7 cut(s) 171, 186, 489, 636, 1653, 1922, 2104
MroI TCCGGA 1 cut(s) 1792
MroNI GCCGGC 1 cut(s) 131
MseI TTAA 1 cut(s) 1550
MspA1I CMGCKG 1 cut(s) 774
MunI CAATTG 2 cut(s) 515, 599
Mva1269I GAATGC 2 cut(s) 995, 1592
MvaI CCWGG 3 cut(s) 809, 878, 1808
MvnI CGCG 8 cut(s) 228, 242, 442, 821, 1085, 1364, 1497, 1564
MwoI GCNNNNNNNGC 7 cut(s) 137, 195, 983, 992, 1125, 1796, 1867
NaeI GCCGGC 1 cut(s) 133
NarI GGCGCC 1 cut(s) 339
NciI CCSGG 7 cut(s) 263, 563, 893, 894, 915, 951, 1310
NcoI CCATGG 1 cut(s) 1609
NgoMIV GCCGGC 1 cut(s) 131
NheI GCTAGC 1 cut(s) 2032
NlaIII CATG 9 cut(s) 202, 1062, 1475, 1530, 1613, 1753, 2018, 2048, 2133
NlaIV GGNNCC 9 cut(s) 136, 340, 636, 813, 882, 919, 1307, 1433, 1434
NmeAIII GCCGAG 1 cut(s) 2112
NmuCI GTSAC 2 cut(s) 369, 736
NspV TTCGAA 1 cut(s) 803
PagI TCATGA 1 cut(s) 2129
PciSI GCTCTTC 1 cut(s) 362
PcsI WCGNNNNNNNCGW 2 cut(s) 1008, 1161
PctI GAATGC 2 cut(s) 995, 1592
PdiI GCCGGC 1 cut(s) 133
PfeI GAWTC 7 cut(s) 8, 213, 256, 709, 1492, 1649, 2110
PfoI TCCNGGA 1 cut(s) 913
PinAI ACCGGT 1 cut(s) 733
PkrI GCNGC 9 cut(s) 306, 309, 776, 985, 988, 1233, 1366, 1592, 2038
Ple19I CGATCG 1 cut(s) 1383
PleI GAGTC 9 cut(s) 62, 70, 152, 343, 954, 1098, 1139, 1671, 1811
PluTI GGCGCC 1 cut(s) 342
PpsI GAGTC 9 cut(s) 62, 70, 152, 343, 954, 1098, 1139, 1671, 1811
Psp124BI GAGCTC 2 cut(s) 285, 1792
Psp1406I AACGTT 1 cut(s) 618
Psp6I CCWGG 3 cut(s) 807, 876, 1806
PspEI GGTNACC 1 cut(s) 896
PspFI CCCAGC 2 cut(s) 721, 1294
PspGI CCWGG 3 cut(s) 807, 876, 1806
PspN4I GGNNCC 9 cut(s) 136, 340, 636, 813, 882, 919, 1307, 1433, 1434
PspOMI GGGCCC 2 cut(s) 811, 1431
PsrI GAACNNNNNNTAC 2 cut(s) 1343, 1375
PstNI CAGNNNCTG 1 cut(s) 526
PsuI RGATCY 3 cut(s) 917, 1305, 1545
PvuI CGATCG 1 cut(s) 1383
RsaI GTAC 6 cut(s) 1063, 1283, 1352, 1424, 1906, 2062
RsaNI GTAC 6 cut(s) 1062, 1282, 1351, 1423, 1905, 2061
SacI GAGCTC 2 cut(s) 285, 1792
SalI GTCGAC 1 cut(s) 116
SapI GCTCTTC 1 cut(s) 362
SaqAI TTAA 1 cut(s) 1550
SatI GCNGC 9 cut(s) 305, 308, 775, 984, 987, 1232, 1365, 1591, 2037
SchI GAGTC 9 cut(s) 62, 70, 152, 343, 955, 1098, 1139, 1671, 1812
SduI GDGCHC 4 cut(s) 285, 815, 1435, 1792
SfaNI GCATC 2 cut(s) 1128, 1405
SfcI CTRYAG 1 cut(s) 1783
SfoI GGCGCC 1 cut(s) 340
SfuI TTCGAA 1 cut(s) 803
SgrAI CRCCGGYG 1 cut(s) 551
SinI GGWCC 3 cut(s) 183, 576, 604
SmaI CCCGGG 1 cut(s) 894
SpeI ACTAGT 1 cut(s) 1901
Sse9I AATT 8 cut(s) 515, 570, 599, 766, 780, 904, 1076, 1601
SspDI GGCGCC 1 cut(s) 338
SspMI CTAG 5 cut(s) 1758, 1800, 1902, 1919, 2033
SstI GAGCTC 2 cut(s) 285, 1792
StyI CCWWGG 1 cut(s) 1609
TaaI ACNGT 4 cut(s) 395, 509, 742, 2101
TaiI ACGT 3 cut(s) 371, 621, 1407
TasI AATT 8 cut(s) 515, 570, 599, 766, 780, 904, 1076, 1601
TatI WGTACW 2 cut(s) 1281, 2060
TauI GCSGC 6 cut(s) 307, 310, 777, 986, 989, 1367
TfiI GAWTC 7 cut(s) 8, 213, 256, 709, 1492, 1649, 2110
Tru1I TTAA 1 cut(s) 1550
Tru9I TTAA 1 cut(s) 1550
TscAI CASTG 1 cut(s) 1462
TseFI GTSAC 2 cut(s) 369, 736
TseI GCWGC 3 cut(s) 1231, 1590, 2036
Tsp45I GTSAC 2 cut(s) 369, 736
TspGWI ACGGA 2 cut(s) 961, 1781
TspMI CCCGGG 1 cut(s) 892
TspRI CASTG 1 cut(s) 1462
VpaK11BI GGWCC 3 cut(s) 183, 576, 604
XapI RAATTY 5 cut(s) 570, 780, 904, 1076, 1601
XcmI CCANNNNNNNNNTGG 1 cut(s) 1827
XmaI CCCGGG 1 cut(s) 892
XmiI GTMKAC 2 cut(s) 117, 1989
XspI CTAG 5 cut(s) 1758, 1800, 1902, 1919, 2033
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.